1092
10000
1 30848586 . C CA 1188 PASS INDEL;BAVGPOST=0.767;BRSQ=0.309;LDAF=0.2539;AVGPOST=0.7155;RSQ=0.3774;ERATE=0.0290;THETA=0.0007;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 30848644 . T TTC 78 PASS INDEL;BAVGPOST=0.914;BRSQ=0.185;LDAF=0.1090;AVGPOST=0.8621;RSQ=0.4350;ERATE=0.0088;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 30848645 rs68161151 T TC 195 PASS INDEL;BAVGPOST=0.860;BRSQ=0.114;LDAF=0.1188;AVGPOST=0.8398;RSQ=0.4142;ERATE=0.0095;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 30848898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.663;LDAF=0.0431;AVGPOST=0.9698;RSQ=0.7310;ERATE=0.0061;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 30848934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9985;RSQ=0.9856;ERATE=0.0006;THETA=0.0001;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30848951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7400;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 30849034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5429;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 30849057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9695;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30849084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6976;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30849108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0386;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 30849140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9991;RSQ=0.9915;ERATE=0.0004;THETA=0.0016;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30849150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30849184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30849188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 30849222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0535;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 30849246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30849256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30849331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8134;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30849343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0538;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 30849434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30849452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30849472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30849508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8179;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30849519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7218;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30849547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30849591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30849605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9335;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30849666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30849674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7279;ERATE=0.0021;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30849818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0374;AVGPOST=0.9992;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 30849849 rs5773293 TCTGCCTC T 84046 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.5341;AVGPOST=0.9870;RSQ=0.9800;ERATE=0.0031;THETA=0.0005;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 30849964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6286;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30849984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6131;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30850155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30850173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30850174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1870;AVGPOST=0.9975;RSQ=0.9939;ERATE=0.0004;THETA=0.0006;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 30850315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7349;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 30850362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8101;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 30850399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0003;THETA=0.0026;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30850409 rs33942940 GACACC G 80294 PASS INDEL;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.7544;AVGPOST=0.9705;RSQ=0.9412;ERATE=0.0032;THETA=0.0005;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 30850473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7420;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 30850481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30850506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9542;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30850633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30850645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8061;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30850695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8209;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30850797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2444;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 30850817 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30850902 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7381;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0008;THETA=0.0006;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 30850915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8292;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=1811;AN=2184 GT:DS:GL:BD 0.82921243 1
1 30850920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5110;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9994;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30851090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.959;LDAF=0.7202;AVGPOST=0.9643;RSQ=0.9333;ERATE=0.0068;THETA=0.0008;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 30851128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0377;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0004;THETA=0.0082;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 30851177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7357;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0005;THETA=0.0010;AC=1607;AN=2184 GT:DS:GL:BD 0.73580587 1
1 30851221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7353;AVGPOST=0.9956;RSQ=0.9910;ERATE=0.0007;THETA=0.0003;AC=1607;AN=2184 GT:DS:GL:BD 0.73580587 1
1 30851229 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8613;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30851283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7403;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30851323 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0525;AVGPOST=0.9938;RSQ=0.9534;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 30851341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7655;AVGPOST=0.9961;RSQ=0.9917;ERATE=0.0006;THETA=0.0010;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 30851428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9254;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30851504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8251;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30851510 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 30851588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30851646 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4908;AVGPOST=0.9964;RSQ=0.9951;ERATE=0.0006;THETA=0.0010;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 30851781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6763;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0019;THETA=0.0002;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 30851786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7706;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30851843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30851888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30851898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.919;LDAF=0.5923;AVGPOST=0.9482;RSQ=0.9389;ERATE=0.0056;THETA=0.0011;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 30852013 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0678;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 30852020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30852021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0057;AVGPOST=0.9974;RSQ=0.8116;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30852097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5126;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0008;THETA=0.0004;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 30852173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30852226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3558;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30852238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4569;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30852257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5720;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30852305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8264;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30852347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0074;AVGPOST=0.9951;RSQ=0.7432;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30852367 . G GC 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3083;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30852413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2114;AVGPOST=0.9957;RSQ=0.9905;ERATE=0.0009;THETA=0.0007;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 30852521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30852563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30852598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7409;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30852615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7344;ERATE=0.0004;THETA=0.0054;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30852688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0291;AVGPOST=0.9993;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 30852689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2654;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 30852759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6832;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30852769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9247;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30852772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0108;AVGPOST=0.9991;RSQ=0.9671;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30852783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5426;ERATE=0.0007;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30852843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5710;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30852934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30852940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30853054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5499;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30853062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0173;AVGPOST=0.9992;RSQ=0.9783;ERATE=0.0005;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30853070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.875;LDAF=0.0248;AVGPOST=0.9856;RSQ=0.7630;ERATE=0.0027;THETA=0.0012;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30853104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.836;LDAF=0.0204;AVGPOST=0.9908;RSQ=0.8178;ERATE=0.0020;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 30853125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8195;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30853261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0670;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0003;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 30853291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9646;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30853336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0154;AVGPOST=0.9959;RSQ=0.8939;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 30853372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30853388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1157;AVGPOST=0.9948;RSQ=0.9821;ERATE=0.0004;THETA=0.0021;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 30853507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30853564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30853607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30853691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30853843 rs71768610 AAAG A 17501 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1901;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 30853847 . AAG A 657 PASS INDEL;BAVGPOST=0.943;BRSQ=0.801;LDAF=0.1428;AVGPOST=0.9468;RSQ=0.8524;ERATE=0.0014;THETA=0.0006;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 30853880 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30853929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5658;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 30853947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30853963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7606;AVGPOST=0.9960;RSQ=0.9917;ERATE=0.0007;THETA=0.0002;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 30853973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9992;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30853989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0073;AVGPOST=0.9973;RSQ=0.8569;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30853993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30854000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7423;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30854005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6819;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30854069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7760;AVGPOST=0.9957;RSQ=0.9907;ERATE=0.0009;THETA=0.0003;AC=1696;AN=2184 GT:DS:GL:BD 0.77655679 1
1 30854161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30854201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30854215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30854350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30854429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8476;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30854456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8898;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30854468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0351;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30854535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30854540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7928;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 30854652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30854916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30854951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7563;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=1651;AN=2184 GT:DS:GL:BD 0.75595236 1
1 30855105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1867;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 30855175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30855291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8865;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30855318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30855544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30855638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8715;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30855815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5660;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0005;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 30855831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30855879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7570;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 30855956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7572;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0005;THETA=0.0002;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 30855960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30855979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6942;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30856130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0092;AVGPOST=0.9967;RSQ=0.8527;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30856174 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4976;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30856184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7578;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 30856202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7936;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 30856211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9697;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30856370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7585;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30856390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5035;AVGPOST=0.9941;RSQ=0.9915;ERATE=0.0015;THETA=0.0004;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 30856449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9990;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30856558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1868;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 30856699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0028;AVGPOST=0.9956;RSQ=0.3668;ERATE=0.0011;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30856883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.975;LDAF=0.2007;AVGPOST=0.9772;RSQ=0.9431;ERATE=0.0046;THETA=0.0002;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 30856934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.7403;AVGPOST=0.9857;RSQ=0.9704;ERATE=0.0025;THETA=0.0004;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 30857114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30857190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.930;LDAF=0.4859;AVGPOST=0.9822;RSQ=0.9747;ERATE=0.0013;THETA=0.0004;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 30857200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.930;LDAF=0.5253;AVGPOST=0.9786;RSQ=0.9707;ERATE=0.0010;THETA=0.0014;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 30857266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30857298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2076;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0006;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 30857385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2074;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 30857450 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7435;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0006;THETA=0.0006;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 30857616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30857620 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5365;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30857633 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30857635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0152;AVGPOST=0.9977;RSQ=0.9411;ERATE=0.0003;THETA=0.0032;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30857714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0067;AVGPOST=0.9955;RSQ=0.7180;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30857729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5366;AVGPOST=0.9953;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30857760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0048;AVGPOST=0.9972;RSQ=0.7803;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30857766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1877;AVGPOST=0.9969;RSQ=0.9928;ERATE=0.0006;THETA=0.0004;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 30857871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5365;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0006;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30857880 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30857952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5364;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30858114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6394;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30858127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5364;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30858146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30858181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5341;AVGPOST=0.9947;RSQ=0.9920;ERATE=0.0017;THETA=0.0005;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 30858198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5233;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30858250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7482;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 30858288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30858383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0177;AVGPOST=0.9985;RSQ=0.9697;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30858439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0050;AVGPOST=0.9959;RSQ=0.7243;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30858450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5363;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 30858462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0060;AVGPOST=0.9966;RSQ=0.7908;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30858494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30858622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0167;AVGPOST=0.9974;RSQ=0.9420;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30858625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0185;AVGPOST=0.9992;RSQ=0.9805;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30858661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6250;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30858662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5342;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30858666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30858705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5349;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0014;THETA=0.0003;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 30858866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6061;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30858874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7941;AVGPOST=0.9983;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 30858926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7396;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30859027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5509;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30859029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0044;AVGPOST=0.9920;RSQ=0.2615;ERATE=0.0008;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30859065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5002;AVGPOST=0.9864;RSQ=0.9816;ERATE=0.0013;THETA=0.0003;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 30859110 . C CG 59 PASS INDEL;BAVGPOST=0.905;BRSQ=0.088;LDAF=0.1492;AVGPOST=0.7704;RSQ=0.2609;ERATE=0.0197;THETA=0.0015;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 30859111 . G GA 4651 PASS INDEL;BAVGPOST=0.798;BRSQ=0.669;LDAF=0.3854;AVGPOST=0.8384;RSQ=0.7768;ERATE=0.0096;THETA=0.0012;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 30859117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.825;LDAF=0.7189;AVGPOST=0.9318;RSQ=0.8924;ERATE=0.0029;THETA=0.0005;AC=1591;AN=2184 GT:DS:GL:BD 0.72847986 1
1 30859134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.880;LDAF=0.7063;AVGPOST=0.9411;RSQ=0.9083;ERATE=0.0033;THETA=0.0003;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 30859178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7446;AVGPOST=0.9809;RSQ=0.9650;ERATE=0.0014;THETA=0.0004;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 30859182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8769;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30859207 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.8931;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30859242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9072;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30859258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7900;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 30859289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0250;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 30859413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5512;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 30859430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8190;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30859431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0003;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30859548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9975;RSQ=0.8655;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30859589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5441;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0010;THETA=0.0002;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 30859664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7576;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30859733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30859737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9360;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30859762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30859859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5441;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 30859949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6622;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30859978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30860010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30860015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30860076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0345;AVGPOST=0.9983;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 30860088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8259;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30860089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8918;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30860125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1835;AVGPOST=0.9975;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 30860177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8690;ERATE=0.0003;THETA=0.0048;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30860221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4359;AVGPOST=0.9888;RSQ=0.9811;ERATE=0.0008;THETA=0.0008;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 30860298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30860440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0040;AVGPOST=0.9955;RSQ=0.6224;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30860460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30860567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30860657 rs55816459 GGAGT G 57646 PASS INDEL;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.5075;AVGPOST=0.9809;RSQ=0.9728;ERATE=0.0026;THETA=0.0002;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 30860662 . GAGT G 11558 PASS INDEL;BAVGPOST=0.940;BRSQ=0.892;LDAF=0.4519;AVGPOST=0.9111;RSQ=0.8698;ERATE=0.0201;THETA=0.0007;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 30860746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30860807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0092;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30860842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8227;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30860875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30860928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0600;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0014;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 30860985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861164 . A ACAAC 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6960;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30861186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30861266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5527;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0011;THETA=0.0007;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30861308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9441;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30861545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6021;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5526;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0014;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 30861816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5523;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0006;THETA=0.0005;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30861855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0637;AVGPOST=0.9986;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 30861865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9117;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30861870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7244;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30861898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30861912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30861914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9955;RSQ=0.5429;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30862160 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0004;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 30862227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9643;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30862260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30862321 . AG A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3255;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30862378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30862441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0207;AVGPOST=0.9987;RSQ=0.9763;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 30862461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5525;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30862480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30862491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9605;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30862582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30862595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30862620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7968;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 30862723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1343;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 30862773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0550;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 30862804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7975;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 30862853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 30862879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0311;AVGPOST=0.9986;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 30862973 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30863066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30863106 . AG A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0041;AVGPOST=0.9933;RSQ=0.3083;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30863119 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5523;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0005;THETA=0.0009;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30863129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9514;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30863142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5520;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0009;THETA=0.0004;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30863154 . TC T 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3928;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30863257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1787;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 30863357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0145;AVGPOST=0.9968;RSQ=0.9059;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30863379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 30863522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30863571 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5538;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 30863705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5535;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0005;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 30863746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.746;LDAF=0.9619;AVGPOST=0.9653;RSQ=0.6668;ERATE=0.0070;THETA=0.0003;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 30863747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.961;LDAF=0.5241;AVGPOST=0.9725;RSQ=0.9622;ERATE=0.0017;THETA=0.0008;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 30863782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30863825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5524;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30863889 . AGC A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30863914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1788;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 30863919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9259;ERATE=0.0003;THETA=0.0018;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30863941 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8551;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30863953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5527;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30864027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9413;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30864053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5533;AVGPOST=0.9926;RSQ=0.9894;ERATE=0.0008;THETA=0.0012;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 30864169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9759;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30864275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0551;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 30864379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0550;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 30864454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9568;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30864617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5524;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0007;THETA=0.0007;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30864631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5524;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0005;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30864645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.833;LDAF=0.0474;AVGPOST=0.9790;RSQ=0.8135;ERATE=0.0014;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 30864662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0186;AVGPOST=0.9977;RSQ=0.9523;ERATE=0.0004;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30864701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30864842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7451;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30864867 . AAAG A 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30864994 . AG A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5722;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30865250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30865263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8915;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30865352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9723;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30865362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4853;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0008;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 30865481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1833;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 30865502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0119;AVGPOST=0.9945;RSQ=0.8292;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30865579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5523;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30865596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30865847 . G GT 598 PASS INDEL;BAVGPOST=0.993;BRSQ=0.765;LDAF=0.0072;AVGPOST=0.9967;RSQ=0.8251;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30865857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8670;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30865859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30865876 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1582;AVGPOST=0.9952;RSQ=0.9864;ERATE=0.0004;THETA=0.0002;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 30866115 . CT C 2793 PASS INDEL;BAVGPOST=0.868;BRSQ=0.804;LDAF=0.4036;AVGPOST=0.8398;RSQ=0.7906;ERATE=0.0150;THETA=0.0006;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 30866117 rs113082174 TA T 56222 PASS INDEL;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5505;AVGPOST=0.9956;RSQ=0.9929;ERATE=0.0006;THETA=0.0002;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 30866120 . AG A 2806 PASS INDEL;BAVGPOST=0.873;BRSQ=0.810;LDAF=0.4145;AVGPOST=0.8537;RSQ=0.8086;ERATE=0.0109;THETA=0.0002;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 30866137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6619;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30866186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8777;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30866216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5524;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0006;THETA=0.0005;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30866284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5521;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30866345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7906;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 30866406 . C CA 972 PASS INDEL;BAVGPOST=0.964;BRSQ=0.694;LDAF=0.0666;AVGPOST=0.9457;RSQ=0.6541;ERATE=0.0155;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 30866414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5508;AVGPOST=0.9956;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 30866473 . G GA 4666 PASS INDEL;BAVGPOST=0.991;BRSQ=0.935;LDAF=0.0746;AVGPOST=0.9660;RSQ=0.8087;ERATE=0.0068;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 30866499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4489;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6366;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866598 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30866639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5529;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0010;THETA=0.0005;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 30866660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5523;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 30866962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30867104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5519;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0008;THETA=0.0008;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 30867131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0691;AVGPOST=0.9980;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 30867154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30867381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5825;ERATE=0.0010;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30867525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6110;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30867602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5783;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30867671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9397;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30867755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4954;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 30867849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5762;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30867945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0350;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30867966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7939;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0005;THETA=0.0006;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 30868109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.5267;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30868110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5961;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30868197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30868241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30868339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0354;AVGPOST=0.9987;RSQ=0.9840;ERATE=0.0004;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30868345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1268;AVGPOST=0.9973;RSQ=0.9900;ERATE=0.0004;THETA=0.0037;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 30868395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30868461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30868504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9587;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30868573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2071;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0012;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 30868855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9301;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30868865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30868866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30868892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30868927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30868956 rs2377362 A AG 56389 PASS INDEL;BAVGPOST=0.958;BRSQ=0.920;LDAF=0.6271;AVGPOST=0.9160;RSQ=0.8718;ERATE=0.0261;THETA=0.0005;AC=1399;AN=2184 GT:DS:GL:BD 0.64056778 1
1 30869150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9562;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30869181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.9008;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30869204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9749;ERATE=0.0007;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30869227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.8477;ERATE=0.0012;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30869322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30869338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9203;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30869353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30869361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4021;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 30869427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30869476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30869479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30869580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30869610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30869659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30869955 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0004;THETA=0.0015;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30870019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30870020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30870350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4943;ERATE=0.0005;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6549;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30870637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8254;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30870644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7115;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30870758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30870850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30870877 . CACGAA C 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30870924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9763;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30870961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0175;AVGPOST=0.9978;RSQ=0.9483;ERATE=0.0011;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30870979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.624;LDAF=0.0086;AVGPOST=0.9898;RSQ=0.5303;ERATE=0.0035;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30871145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.730;LDAF=0.0481;AVGPOST=0.9682;RSQ=0.7419;ERATE=0.0045;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 30871154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0215;AVGPOST=0.9954;RSQ=0.9211;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 30871187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3489;ERATE=0.0007;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.324;LDAF=0.1576;AVGPOST=0.7876;RSQ=0.3206;ERATE=0.0366;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 30871393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.498;LDAF=0.0043;AVGPOST=0.9937;RSQ=0.4285;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30871420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4445;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3761;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9470;ERATE=0.0003;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30871788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30871851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30871978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0297;AVGPOST=0.9984;RSQ=0.9794;ERATE=0.0003;THETA=0.0010;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 30872007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30872008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1866;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0023;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 30872085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9175;ERATE=0.0006;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30872112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30872183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6386;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30872196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2525;AVGPOST=0.9936;RSQ=0.9880;ERATE=0.0014;THETA=0.0008;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 30872435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9854;ERATE=0.0003;THETA=0.0026;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30872460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1854;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 30872564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9994;RSQ=0.9845;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30872656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30872721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30872734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0152;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0003;THETA=0.0024;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30872816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0004;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30872827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30872850 rs11416301 A AT 79228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6820;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0006;THETA=0.0008;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 30872867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6817;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0014;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 30873155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30873219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0249;AVGPOST=0.9991;RSQ=0.9849;ERATE=0.0004;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30873228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30873236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30873351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30873370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30873408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6331;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30873469 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6811;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0008;THETA=0.0002;AC=1487;AN=2184 GT:DS:GL:BD 0.68086082 1
1 30873597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6430;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30873628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5875;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30873699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6814;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0006;THETA=0.0006;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 30873767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6808;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0007;THETA=0.0014;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 30873978 . T TTA 26 PASS INDEL;BAVGPOST=0.997;BRSQ=0.625;LDAF=0.0045;AVGPOST=0.9936;RSQ=0.4338;ERATE=0.0016;THETA=0.0102;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30873986 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8484;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30874104 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8474;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30874138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30874258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7687;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30874507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9285;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30874537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0005;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30874557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30874558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30874649 . AG A 780 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9285;ERATE=0.0003;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30874653 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0334;AVGPOST=0.9980;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 30874688 rs58598670 TC T 2117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0229;AVGPOST=0.9987;RSQ=0.9794;ERATE=0.0003;THETA=0.0074;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30874690 . CA C 168 PASS INDEL;BAVGPOST=0.981;BRSQ=0.665;LDAF=0.0357;AVGPOST=0.9755;RSQ=0.7326;ERATE=0.0012;THETA=0.0042;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30874733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30874753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6809;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0004;THETA=0.0012;AC=1486;AN=2184 GT:DS:GL:BD 0.68040293 1
1 30874834 rs60255235 CTCTT C 388 PASS INDEL;BAVGPOST=0.982;BRSQ=0.680;LDAF=0.0329;AVGPOST=0.9721;RSQ=0.6630;ERATE=0.0061;THETA=0.0031;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30874886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30874944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30875017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0294;AVGPOST=0.9982;RSQ=0.9757;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 30875110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7283;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 30875190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7288;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0006;THETA=0.0009;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 30875192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8103;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30875220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30875223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30875239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7924;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30875309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1513;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 30875513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8106;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30875515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1635;AVGPOST=0.9904;RSQ=0.9757;ERATE=0.0005;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 30875556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30875571 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8323;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30875655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1518;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 30875673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9038;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30875701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30875784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1861;AVGPOST=0.9956;RSQ=0.9883;ERATE=0.0010;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 30875817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30875851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30875857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30875892 rs113536882 TCCA T 97153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.9988;AVGPOST=0.9984;RSQ=0.4301;ERATE=0.0005;THETA=0.0003;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 30875931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30875987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5606;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 30876017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.5923;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30876221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9415;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30876239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30876277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 30876333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8578;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30876361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.8943;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30876410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30876496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30876540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30876774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8999;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30876824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8818;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30876825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0004;THETA=0.0019;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30876858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9425;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30876925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 30876997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30877025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877102 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.978;LDAF=0.5293;AVGPOST=0.9881;RSQ=0.9815;ERATE=0.0016;THETA=0.0001;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 30877285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30877326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7378;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30877396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0103;AVGPOST=0.9977;RSQ=0.9223;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30877545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8476;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30877572 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3766;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877648 . G GA 484 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7510;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30877653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9330;AVGPOST=0.9972;RSQ=0.9823;ERATE=0.0012;THETA=0.0009;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 30877781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30877873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8055;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30877903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30877952 rs36052368 GC G 18591 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1850;AVGPOST=0.9931;RSQ=0.9823;ERATE=0.0006;THETA=0.0005;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 30877957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7809;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30878112 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1310;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 30878116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9060;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30878147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30878174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 30878285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3032;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 30878359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30878363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6558;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 30878407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30878420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8511;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30878530 . CA C 162 PASS INDEL;BAVGPOST=0.661;BRSQ=0.495;LDAF=0.4395;AVGPOST=0.7661;RSQ=0.7013;ERATE=0.0012;THETA=0.0047;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 30878531 . AG A 7435 PASS INDEL;BAVGPOST=0.755;BRSQ=0.660;LDAF=0.4119;AVGPOST=0.7598;RSQ=0.6819;ERATE=0.0168;THETA=0.0005;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 30878549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0060;AVGPOST=0.9931;RSQ=0.5336;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30878565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0203;AVGPOST=0.9967;RSQ=0.9268;ERATE=0.0011;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30878609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6002;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30878670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30878726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30878809 . C CAG 9218 PASS INDEL;BAVGPOST=0.744;BRSQ=0.658;LDAF=0.4167;AVGPOST=0.7304;RSQ=0.6363;ERATE=0.0442;THETA=0.0004;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 30878945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30878965 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30879042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2997;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 30879056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0394;AVGPOST=0.9984;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30879131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9126;AVGPOST=0.9979;RSQ=0.9896;ERATE=0.0005;THETA=0.0006;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 30879155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8890;ERATE=0.0009;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30879253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9403;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30879395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30879488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1268;AVGPOST=0.9970;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 30879500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2251;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0038;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 30879543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9338;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30879578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0124;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30879592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9190;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30879693 rs4012790 CA C 787 PASS INDEL;BAVGPOST=0.952;BRSQ=0.546;LDAF=0.0810;AVGPOST=0.9150;RSQ=0.5333;ERATE=0.0150;THETA=0.0069;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 30879707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9347;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30879713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30879917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.945;LDAF=0.2575;AVGPOST=0.9759;RSQ=0.9539;ERATE=0.0021;THETA=0.0010;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 30879935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5887;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30880073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5910;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30880115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.9405;AVGPOST=0.9963;RSQ=0.9772;ERATE=0.0004;THETA=0.0052;AC=2056;AN=2184 GT:DS:GL:BD 0.94139194 1
1 30880133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7939;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30880180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8705;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30880190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7678;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30880334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7960;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30880594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7107;ERATE=0.0017;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30880602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5947;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30880652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5872;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30880741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30880742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5229;AVGPOST=0.9884;RSQ=0.9826;ERATE=0.0007;THETA=0.0005;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 30880902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4253;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30881068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30881168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30881236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.9278;AVGPOST=0.9970;RSQ=0.9834;ERATE=0.0004;THETA=0.0004;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 30881322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30881355 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30881447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0558;AVGPOST=0.9899;RSQ=0.9236;ERATE=0.0015;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 30881509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9372;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30881651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7527;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30881654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4103;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30881667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2418;AVGPOST=0.9886;RSQ=0.9771;ERATE=0.0009;THETA=0.0006;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 30881677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1997;AVGPOST=0.9912;RSQ=0.9789;ERATE=0.0005;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 30881698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9141;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30881700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9381;ERATE=0.0004;THETA=0.0025;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30881712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9648;ERATE=0.0004;THETA=0.0025;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30881715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6387;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30881758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30881764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0277;AVGPOST=0.9948;RSQ=0.9387;ERATE=0.0003;THETA=0.0035;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 30881772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30881825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9679;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30881939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30882036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2447;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 30882051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7632;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30882061 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0337;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 30882186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30882292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30882293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2656;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 30882307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30882310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30882393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30882402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0339;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 30882529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7567;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30882569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0159;AVGPOST=0.9975;RSQ=0.9316;ERATE=0.0007;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30882598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0155;AVGPOST=0.9981;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30882622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30882672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6861;ERATE=0.0008;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30882693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8421;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30882802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30882880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7540;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30882957 . ACT A 2133 PASS INDEL;BAVGPOST=0.957;BRSQ=0.899;LDAF=0.2280;AVGPOST=0.9658;RSQ=0.9306;ERATE=0.0038;THETA=0.0003;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 30882958 rs111266585 CTCTT C 24579 PASS INDEL;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.2417;AVGPOST=0.9946;RSQ=0.9883;ERATE=0.0005;THETA=0.0005;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 30883025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30883070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30883150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8598;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30883232 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0122;AVGPOST=0.9951;RSQ=0.8558;ERATE=0.0008;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30883369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2458;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 30883441 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5273;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30883503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2460;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 30883504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7165;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30883532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4436;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30883626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30883655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6140;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30883656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9531;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30883671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30883764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30883782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30883957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30883987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30883993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30884028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5024;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30884095 rs66925623 AGGGTAAGAAG A 36636 PASS INDEL;BAVGPOST=0.985;BRSQ=0.961;LDAF=0.2418;AVGPOST=0.9937;RSQ=0.9861;ERATE=0.0005;THETA=0.0004;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 30884273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30884277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6675;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30884318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8411;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30884401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30884419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0255;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0016;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 30884432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0268;AVGPOST=0.9959;RSQ=0.9371;ERATE=0.0003;THETA=0.0021;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 30884549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9594;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30884627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30884687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30884697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30884718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1176;AVGPOST=0.9971;RSQ=0.9900;ERATE=0.0005;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 30884721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9276;AVGPOST=0.9985;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=2026;AN=2184 GT:DS:GL:BD 0.92765570 1
1 30884918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30884967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3310;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0007;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 30884971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9816;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30884972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7079;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0006;THETA=0.0007;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 30884977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.9262;AVGPOST=0.9965;RSQ=0.9817;ERATE=0.0005;THETA=0.0005;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 30885051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8395;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30885058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30885082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9277;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=2026;AN=2184 GT:DS:GL:BD 0.92765570 1
1 30885123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30885210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6845;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0005;THETA=0.0004;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 30885231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7536;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30885308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30885345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8326;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30885349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2000;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 30885414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30885434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30885437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1184;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0004;THETA=0.0019;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 30885447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30885456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7829;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30885460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30885525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8759;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 30885644 . AGT A 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8732;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30885648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0173;AVGPOST=0.9972;RSQ=0.9329;ERATE=0.0008;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30885854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8175;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30885937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0217;AVGPOST=0.9975;RSQ=0.9577;ERATE=0.0005;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30885938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0217;AVGPOST=0.9977;RSQ=0.9615;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30885940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0246;AVGPOST=0.9949;RSQ=0.9215;ERATE=0.0004;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30885961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5323;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30886028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2004;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0006;THETA=0.0005;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 30886094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9561;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30886106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886125 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6357;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30886153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8516;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30886196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30886232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6355;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30886266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30886376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2085;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 30886551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7748;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30886559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30886598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5338;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886634 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8483;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30886679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30886682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30886791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3101;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0004;THETA=0.0010;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 30886811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4680;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7071;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30886877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30886907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2432;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0007;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 30886977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6516;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30887063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1771;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 30887075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0059;AVGPOST=0.9978;RSQ=0.8388;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30887171 . AG A 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4428;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30887238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30887240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30887340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8075;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30887409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1998;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 30887441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2161;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 30887458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30887636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2239;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 30887646 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3135;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 30887654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30887689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30887732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5777;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 30887739 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9433;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30887748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30887762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0472;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 30887814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8324;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30887822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0060;AVGPOST=0.9976;RSQ=0.8305;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30887835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3399;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0007;THETA=0.0004;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 30887879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0688;AVGPOST=0.9983;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 30887894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2054;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 30887955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30888005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30888077 rs5773299 GT G 691 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0083;AVGPOST=0.9977;RSQ=0.8853;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30888099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30888246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30888280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30888292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7316;ERATE=0.0017;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30888316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30888329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5667;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 30888429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2057;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 30888481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9219;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30888561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30888609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30888665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0444;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 30888785 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2262;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 30888826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8503;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30888985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30889080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5670;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 30889188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30889232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0718;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 30889434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2161;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 30889700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30889701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2160;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 30889723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7407;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30889775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1991;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 30889844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0271;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 30889883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1986;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 30889960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30889963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5540;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30889992 . TG T 758 PASS INDEL;BAVGPOST=0.944;BRSQ=0.814;LDAF=0.1415;AVGPOST=0.9835;RSQ=0.9504;ERATE=0.0009;THETA=0.0002;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 30889994 rs67476860 GC G 12948 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1320;AVGPOST=0.9918;RSQ=0.9741;ERATE=0.0006;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 30889996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7771;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30889999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1336;AVGPOST=0.9963;RSQ=0.9883;ERATE=0.0003;THETA=0.0021;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 30890053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1792;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 30890119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0154;AVGPOST=0.9986;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30890134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2186;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0007;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 30890143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1792;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 30890144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0448;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 30890151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30890163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30890205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2167;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 30890246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0298;AVGPOST=0.9989;RSQ=0.9856;ERATE=0.0006;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 30890275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2196;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 30890327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0141;AVGPOST=0.9979;RSQ=0.9505;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30890332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7817;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30890335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8647;AVGPOST=0.9940;RSQ=0.9825;ERATE=0.0004;THETA=0.0005;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 30890336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9530;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30890354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0252;AVGPOST=0.9993;RSQ=0.9880;ERATE=0.0004;THETA=0.0017;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 30890393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30890433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0121;AVGPOST=0.9985;RSQ=0.9505;ERATE=0.0014;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30890475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2181;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 30890516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2191;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 30890532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1790;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0004;THETA=0.0020;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 30890583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9302;ERATE=0.0007;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30890587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5831;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0004;THETA=0.0014;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 30890687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7311;ERATE=0.0011;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30890807 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3165;AVGPOST=0.9936;RSQ=0.9897;ERATE=0.0005;THETA=0.0019;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 30890827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9333;ERATE=0.0004;THETA=0.0108;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30890860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2465;AVGPOST=0.9845;RSQ=0.9673;ERATE=0.0067;THETA=0.0250;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 30890872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0369;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30891173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.958;LDAF=0.1889;AVGPOST=0.9814;RSQ=0.9600;ERATE=0.0013;THETA=0.0554;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 30891217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.901;LDAF=0.1903;AVGPOST=0.9633;RSQ=0.9110;ERATE=0.0068;THETA=0.0357;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 30891435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0164;AVGPOST=0.9949;RSQ=0.8659;ERATE=0.0004;THETA=0.0210;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30891494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6944;ERATE=0.0004;THETA=0.0319;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30891523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9148;ERATE=0.0003;THETA=0.0262;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30891548 . CTG C 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0302;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30891555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.738;LDAF=0.0073;AVGPOST=0.9949;RSQ=0.7403;ERATE=0.0018;THETA=0.0158;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30891560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8670;ERATE=0.0004;THETA=0.0185;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30891594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0062;AVGPOST=0.9959;RSQ=0.7580;ERATE=0.0018;THETA=0.0508;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30891630 rs58051102 AG A 6780 PASS INDEL;BAVGPOST=0.965;BRSQ=0.822;LDAF=0.0858;AVGPOST=0.9599;RSQ=0.8138;ERATE=0.0025;THETA=0.0400;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 30891779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6924;ERATE=0.0004;THETA=0.0522;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30891792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.863;LDAF=0.4867;AVGPOST=0.9191;RSQ=0.8829;ERATE=0.0143;THETA=0.0474;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 30891860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.910;LDAF=0.5217;AVGPOST=0.9309;RSQ=0.9156;ERATE=0.0032;THETA=0.0347;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 30891945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0188;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30892085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7573;ERATE=0.0007;THETA=0.0221;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30892109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0357;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30892219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9321;ERATE=0.0004;THETA=0.0169;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30892222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.2772;AVGPOST=0.9713;RSQ=0.9475;ERATE=0.0025;THETA=0.0265;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 30892426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3279;AVGPOST=0.9856;RSQ=0.9773;ERATE=0.0004;THETA=0.0027;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 30892456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0602;AVGPOST=0.9986;RSQ=0.9913;ERATE=0.0003;THETA=0.0046;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 30892462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30892555 rs59000287 TCAGTTTACACA T 12818 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0362;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0003;THETA=0.0091;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 30892645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.6538;AVGPOST=0.9932;RSQ=0.9893;ERATE=0.0006;THETA=0.0003;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 30892683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9392;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30892813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6053;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30892915 . AC A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30892974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7277;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30893108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30893219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.867;BRSQ=0.827;LDAF=0.4293;AVGPOST=0.8872;RSQ=0.8672;ERATE=0.0020;THETA=0.0005;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 30893251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30893256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2174;AVGPOST=0.9969;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 30893316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30893321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1522;AVGPOST=0.9863;RSQ=0.9628;ERATE=0.0005;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 30893487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7615;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30893525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0004;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 30893541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2721;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 30893591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8997;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30893720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2150;AVGPOST=0.9950;RSQ=0.9897;ERATE=0.0008;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 30893784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30893792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2719;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 30893832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30893844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8352;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30893862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8848;ERATE=0.0016;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30893878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9697;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 30893883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0450;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 30893929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30893944 . GC G 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30894001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30894004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6362;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0031;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 30894160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6558;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 30894168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2489;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 30894253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30894269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0178;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30894293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30894341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30894458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30894530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6558;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 30894560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 30894737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30894745 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30894756 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30894773 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30894903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30895058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0353;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 30895183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30895185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30895363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30895374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30895439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0328;AVGPOST=0.9976;RSQ=0.9742;ERATE=0.0004;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 30895472 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0775;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 30895481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30895524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9391;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30895540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8676;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30895600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2699;AVGPOST=0.9908;RSQ=0.9817;ERATE=0.0012;THETA=0.0003;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 30895840 . C CA 845 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9324;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30895852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0187;AVGPOST=0.9981;RSQ=0.9643;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30896138 . T TC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7800;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30896188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30896200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30896237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30896273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0948;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 30896297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5360;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30896378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9503;ERATE=0.0003;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30896419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30896439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30896524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7625;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30896673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8987;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30896708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30896720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30896798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30896819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0318;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30896842 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6405;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30896858 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9196;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30896862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30896900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30896901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3156;AVGPOST=0.9934;RSQ=0.9897;ERATE=0.0004;THETA=0.0006;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 30896960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8252;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30897028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30897053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6863;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30897107 . GATA G 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30897225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8580;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30897246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6110;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30897491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9974;RSQ=0.8234;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30897492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8784;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30897541 . TC T 151 PASS INDEL;BAVGPOST=0.970;BRSQ=0.423;LDAF=0.0227;AVGPOST=0.9712;RSQ=0.5158;ERATE=0.0018;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30897554 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30897614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7867;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30897718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30897816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30897819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1385;AVGPOST=0.9980;RSQ=0.9939;ERATE=0.0007;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 30897857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30897876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9692;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30897885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30897901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9984;RSQ=0.9861;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 30897973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30898029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9540;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30898055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9054;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30898112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6922;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30898367 . GC G 84 PASS INDEL;BAVGPOST=0.995;BRSQ=0.718;LDAF=0.0133;AVGPOST=0.9893;RSQ=0.6831;ERATE=0.0035;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30898368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5749;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30898371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30898385 . AAG A 434 PASS INDEL;BAVGPOST=0.972;BRSQ=0.623;LDAF=0.0658;AVGPOST=0.9282;RSQ=0.5201;ERATE=0.0201;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 30898404 . AGG A 147 PASS INDEL;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7078;ERATE=0.0017;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30898448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30898612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30898649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30898743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30898779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30898841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30898855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2162;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 30898929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30898931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30898951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30899016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30899043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30899045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7771;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30899094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9612;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30899101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8690;ERATE=0.0007;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30899176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8565;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30899200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30899263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8930;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30899304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30899324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2239;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 30899409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30899450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30899459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30899501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9671;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30899621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30899628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30899663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30899960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1104;AVGPOST=0.9981;RSQ=0.9933;ERATE=0.0006;THETA=0.0002;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 30900090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4382;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30900173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0234;AVGPOST=0.9987;RSQ=0.9777;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30900251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900272 . TAA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900412 . CA C 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7789;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30900415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8880;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30900448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30900458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 30900478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6305;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30900521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30900528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30900614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1103;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 30900621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8152;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30900701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7763;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30900720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0348;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30900730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30900770 . C CA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30900838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30900878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9634;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30900891 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901070 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0385;AVGPOST=0.9957;RSQ=0.9623;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 30901074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5576;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30901106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901137 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7518;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30901172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9416;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30901217 . GA G 315 PASS INDEL;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0049;AVGPOST=0.9964;RSQ=0.7138;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30901263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9992;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 30901300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5652;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30901349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30901427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30901465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7679;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30901484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9966;RSQ=0.6297;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30901494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9055;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30901513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0404;AVGPOST=0.9985;RSQ=0.9877;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30901549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2241;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 30901573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0708;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30901622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3891;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30901826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30901835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30901980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0721;AVGPOST=0.9985;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 30902007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30902017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0349;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30902230 . AATC A 10805 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0399;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30902258 . GTTA G 484 PASS INDEL;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8337;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30902267 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0511;AVGPOST=0.9921;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 30902362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2313;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0006;THETA=0.0002;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 30902385 rs35885405 TA T 41698 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6497;AVGPOST=0.9849;RSQ=0.9778;ERATE=0.0040;THETA=0.0006;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 30902399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7054;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30902405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8333;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30902439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30902465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30902490 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30902595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0348;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30902661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30902705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8489;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30902772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30902904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30902929 . A AAC 36504 PASS INDEL;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.6493;AVGPOST=0.9914;RSQ=0.9866;ERATE=0.0006;THETA=0.0002;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 30902931 rs72510612 C CAA 89040 PASS INDEL;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.6494;AVGPOST=0.9912;RSQ=0.9868;ERATE=0.0005;THETA=0.0002;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 30903328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4949;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30903357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7781;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30903504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0104;AVGPOST=0.9958;RSQ=0.8531;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30903552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1381;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 30903592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5214;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30903705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8108;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30903775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30903841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9983;RSQ=0.9868;ERATE=0.0004;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 30903878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9639;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30903894 . T TA 29178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2245;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 30903898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30904047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0318;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30904059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 30904069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30904091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0171;AVGPOST=0.9993;RSQ=0.9848;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30904148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8823;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30904163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2170;AVGPOST=0.9967;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 30904170 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0704;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30904183 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30904197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 30904211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0399;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30904255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7659;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30904298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0706;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30904345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6760;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30904373 . C CA 2006 PASS INDEL;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9784;ERATE=0.0004;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30904420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6878;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30904459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0709;AVGPOST=0.9987;RSQ=0.9912;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30904464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30904472 rs58459240 G GA 4177 PASS INDEL;BAVGPOST=0.987;BRSQ=0.907;LDAF=0.0752;AVGPOST=0.9842;RSQ=0.9142;ERATE=0.0037;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 30904488 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9801;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30904576 . T TA 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5224;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30904768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1379;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 30904793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0320;AVGPOST=0.9988;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30904798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8156;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30904804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0107;AVGPOST=0.9960;RSQ=0.8565;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30904843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30904933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5542;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30904972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1102;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 30905009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30905070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30905071 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30905141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1380;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 30905237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0319;AVGPOST=0.9991;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30905239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30905240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8831;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30905352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0178;AVGPOST=0.9990;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30905404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0418;AVGPOST=0.9978;RSQ=0.9818;ERATE=0.0004;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30905407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30905417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6606;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30905506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30905528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30905627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7388;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30905642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7315;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30905645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9450;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30905675 . G GA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4553;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30905678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8329;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30905876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30905885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.9005;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30906100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30906121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30906122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30906124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7863;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30906160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30906258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9423;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30906372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9989;RSQ=0.9884;ERATE=0.0004;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30906400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30906565 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8200;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30906574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30906658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9015;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30907110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0718;AVGPOST=0.9985;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 30907142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30907231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0705;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30907282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30907311 . ATACT A 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6974;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30907454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0707;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30907565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2454;AVGPOST=0.9957;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 30907590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30907604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6422;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30907660 . TAA T 7846 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30907697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1103;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 30907790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7317;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30907830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6819;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30907850 . C CA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4912;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30907876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5110;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30907934 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30908055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5828;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30908091 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30908203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8328;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30908233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8576;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30908393 . A AC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30908552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0401;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30908556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0015;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30908689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6513;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 30908699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1086;AVGPOST=0.9982;RSQ=0.9930;ERATE=0.0005;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 30908733 . G GTC 103 PASS INDEL;BAVGPOST=0.995;BRSQ=0.468;LDAF=0.0055;AVGPOST=0.9916;RSQ=0.3606;ERATE=0.0021;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30908774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30908801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7627;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30908820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30908907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9992;RSQ=0.9857;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30909153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5365;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30909212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30909405 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30909441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0356;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 30909507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1100;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 30909615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0113;AVGPOST=0.9986;RSQ=0.9583;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30909628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5830;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30909638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30909639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6501;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 30909681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0700;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30909820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4213;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30909869 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30909888 . CTA C 9427 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0395;AVGPOST=0.9992;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 30909955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6348;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30910007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7017;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30910049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30910090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0705;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30910165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0176;AVGPOST=0.9984;RSQ=0.9669;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30910285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30910349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9246;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30910399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4369;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30910557 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7205;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30910646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0350;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 30910657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30910756 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30910782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0703;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 30910821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2215;AVGPOST=0.9951;RSQ=0.9886;ERATE=0.0004;THETA=0.0007;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 30910824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6928;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30910843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6143;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30910858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0148;AVGPOST=0.9970;RSQ=0.9174;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30910906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0105;AVGPOST=0.9952;RSQ=0.8027;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30911035 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0700;AVGPOST=0.9978;RSQ=0.9856;ERATE=0.0004;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 30911045 . CAT C 1603 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9242;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30911086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9220;ERATE=0.0004;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30911214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30911216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0343;AVGPOST=0.9992;RSQ=0.9907;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 30911254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30911387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0041;AVGPOST=0.9949;RSQ=0.5959;ERATE=0.0006;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30911426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0176;AVGPOST=0.9935;RSQ=0.8661;ERATE=0.0007;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30913779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0388;AVGPOST=0.9942;RSQ=0.9447;ERATE=0.0006;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 30913825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0241;AVGPOST=0.9880;RSQ=0.8135;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30913826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6219;ERATE=0.0013;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30913829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0221;AVGPOST=0.9986;RSQ=0.9709;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30913832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.748;LDAF=0.0497;AVGPOST=0.9785;RSQ=0.8402;ERATE=0.0012;THETA=0.0021;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 30914461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7651;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30914479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9312;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30914485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6857;ERATE=0.0003;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30914566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7555;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30915619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7692;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30915621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8789;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30915634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30915650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.548;LDAF=0.1551;AVGPOST=0.8876;RSQ=0.6937;ERATE=0.0096;THETA=0.0009;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 30916953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3784;ERATE=0.0007;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30916991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0134;AVGPOST=0.9918;RSQ=0.7468;ERATE=0.0010;THETA=0.0033;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30917012 . AG A 26858 PASS INDEL;BAVGPOST=0.993;BRSQ=0.538;LDAF=0.9904;AVGPOST=0.9886;RSQ=0.5053;ERATE=0.0012;THETA=0.0027;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 30917036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6922;ERATE=0.0006;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30917152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.2618;AVGPOST=0.9795;RSQ=0.9630;ERATE=0.0007;THETA=0.0025;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 30917199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0905;AVGPOST=0.9970;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 30917201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.7081;ERATE=0.0003;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30917228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7157;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30917280 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30917309 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30917310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30917433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7972;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30917443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3891;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30917559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8734;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30917639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7948;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30917734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30917748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30917771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8183;ERATE=0.0006;THETA=0.0063;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30917780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0179;AVGPOST=0.9987;RSQ=0.9679;ERATE=0.0004;THETA=0.0084;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 30917786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30917905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8805;ERATE=0.0004;THETA=0.0041;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30918024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30918076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0279;AVGPOST=0.9989;RSQ=0.9835;ERATE=0.0003;THETA=0.0057;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30918119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8608;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30918166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.2104;AVGPOST=0.9890;RSQ=0.9773;ERATE=0.0011;THETA=0.0049;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 30918184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9508;ERATE=0.0003;THETA=0.0104;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30918290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8251;ERATE=0.0007;THETA=0.0106;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30918453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.3441;AVGPOST=0.9817;RSQ=0.9721;ERATE=0.0007;THETA=0.0096;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 30918478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0004;THETA=0.0061;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30918501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7332;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30918521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0063;AVGPOST=0.9968;RSQ=0.7938;ERATE=0.0007;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30918527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0080;AVGPOST=0.9964;RSQ=0.8028;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30918537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30918564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8450;ERATE=0.0003;THETA=0.0093;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30918567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0261;AVGPOST=0.9986;RSQ=0.9801;ERATE=0.0003;THETA=0.0061;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 30918568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30918573 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30918674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.7923;ERATE=0.0025;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30918675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9786;ERATE=0.0004;THETA=0.0036;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30918694 . A AT 1203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8891;ERATE=0.0004;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30918695 . TG T 1423 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0168;AVGPOST=0.9962;RSQ=0.9124;ERATE=0.0005;THETA=0.0084;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30918773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30918819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30918826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9096;ERATE=0.0004;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30918835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5886;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30918880 . G GAGGGC 143 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30918977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7584;ERATE=0.0008;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30919007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5368;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30919016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3597;AVGPOST=0.9914;RSQ=0.9868;ERATE=0.0006;THETA=0.0005;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 30919030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7230;AVGPOST=0.9939;RSQ=0.9887;ERATE=0.0005;THETA=0.0035;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 30919064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0229;AVGPOST=0.9991;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30919111 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30919117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7288;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30919158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7203;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30919159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6838;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30919180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30919195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0173;AVGPOST=0.9992;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30919197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9985;RSQ=0.9651;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30919225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0159;AVGPOST=0.9986;RSQ=0.9664;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30919267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3592;AVGPOST=0.9909;RSQ=0.9849;ERATE=0.0039;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 30919286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30919378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3668;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0005;THETA=0.0006;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 30919389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30919399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0177;AVGPOST=0.9990;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30919504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0209;AVGPOST=0.9980;RSQ=0.9653;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 30919514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0207;AVGPOST=0.9982;RSQ=0.9707;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 30919525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0196;AVGPOST=0.9965;RSQ=0.9421;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 30919529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9987;RSQ=0.9512;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30919569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30919572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6279;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30919625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0185;AVGPOST=0.9987;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30919626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3596;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 30919741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7229;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 30919829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7969;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30919878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7797;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30919975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.7229;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30920032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5715;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30920060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8544;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30920116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6344;AVGPOST=0.9938;RSQ=0.9908;ERATE=0.0006;THETA=0.0005;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 30920151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30920164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3600;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 30920168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3596;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 30920216 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30920253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7993;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 30920336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7994;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 30920429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0210;AVGPOST=0.9977;RSQ=0.9566;ERATE=0.0005;THETA=0.0022;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 30920464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7160;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30920593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30920790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 30920818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3779;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 30920875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0949;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30920920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7920;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0005;THETA=0.0002;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 30920926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0953;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30920940 . AC A 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6277;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30920952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30920961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0240;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 30921010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30921183 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30921372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30921381 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5520;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30921436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6492;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30921454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0220;AVGPOST=0.9988;RSQ=0.9764;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 30921611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30921672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8016;ERATE=0.0014;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30921744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3584;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 30921852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30921919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30921936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0189;AVGPOST=0.9984;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30922038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0438;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 30922265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8787;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30922314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4547;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0007;THETA=0.0002;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 30922522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7936;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 30922544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9324;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30922568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30922597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3607;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 30922614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0951;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30922615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30922668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9132;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30922685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0079;AVGPOST=0.9976;RSQ=0.8949;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30922714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4909;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30922884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30922932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9988;RSQ=0.9759;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30922960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30923024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9166;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30923056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6407;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30923071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30923151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3615;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 30923171 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3604;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 30923182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0951;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0008;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30923203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0950;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30923216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7568;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30923251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0944;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 30923277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30923387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30923423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3616;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 30923446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30923514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30923598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30923651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0334;AVGPOST=0.9985;RSQ=0.9832;ERATE=0.0004;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 30923698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0350;AVGPOST=0.9957;RSQ=0.9499;ERATE=0.0004;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 30923735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7113;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30923756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30923786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3147;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 30923829 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8277;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30923908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9520;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30923962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7009;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30923971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0104;AVGPOST=0.9970;RSQ=0.8706;ERATE=0.0009;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30924073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9521;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30924094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30924110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0219;AVGPOST=0.9984;RSQ=0.9765;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30924112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3050;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 30924115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30924174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30924242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8116;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30924270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30924309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0954;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30924446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8381;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30924475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2755;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 30924476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0512;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 30924599 . GT G 1101 PASS INDEL;BAVGPOST=0.777;BRSQ=0.276;LDAF=0.2130;AVGPOST=0.7579;RSQ=0.3967;ERATE=0.0307;THETA=0.0004;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 30924601 rs71028703 G GGC 2236 PASS INDEL;BAVGPOST=0.983;BRSQ=0.921;LDAF=0.0997;AVGPOST=0.9932;RSQ=0.9695;ERATE=0.0011;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 30924602 . G GC 2520 PASS INDEL;BAVGPOST=0.989;BRSQ=0.943;LDAF=0.0973;AVGPOST=0.9963;RSQ=0.9836;ERATE=0.0007;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 30924619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0969;AVGPOST=0.9956;RSQ=0.9784;ERATE=0.0008;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30924630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0035;AVGPOST=0.9952;RSQ=0.4809;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30924713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7886;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30924723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0952;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 30924724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0076;AVGPOST=0.9967;RSQ=0.8281;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30924777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6804;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30924798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4562;ERATE=0.0005;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30924799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8164;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30924835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9300;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30924897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9893;AVGPOST=0.9986;RSQ=0.9415;ERATE=0.0004;THETA=0.0004;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 30925006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2751;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0011;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 30925014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7351;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 30925066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9987;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 30925152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0097;AVGPOST=0.9980;RSQ=0.9257;ERATE=0.0004;THETA=0.0037;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30925209 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30925285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4188;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0004;THETA=0.0022;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 30925416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0025;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30925455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0190;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30925523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0171;AVGPOST=0.9894;RSQ=0.7748;ERATE=0.0032;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30925635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30925757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0188;AVGPOST=0.9981;RSQ=0.9625;ERATE=0.0004;THETA=0.0048;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30925794 . A AC 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8302;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30925799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30925952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7679;AVGPOST=0.9922;RSQ=0.9854;ERATE=0.0005;THETA=0.0005;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 30925979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0093;AVGPOST=0.9974;RSQ=0.8897;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30925999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8912;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30926085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30926086 . GA G 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7551;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30926170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9454;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30926194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4735;AVGPOST=0.9953;RSQ=0.9938;ERATE=0.0004;THETA=0.0002;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 30926232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30926245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30926266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.879;LDAF=0.0135;AVGPOST=0.9973;RSQ=0.9185;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30926397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8705;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30926479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6836;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30926540 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4151;ERATE=0.0010;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30926562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.790;LDAF=0.2575;AVGPOST=0.9255;RSQ=0.8744;ERATE=0.0037;THETA=0.0035;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 30926583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.892;LDAF=0.2916;AVGPOST=0.9774;RSQ=0.9619;ERATE=0.0010;THETA=0.0005;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 30926629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30926652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.3243;AVGPOST=0.9883;RSQ=0.9805;ERATE=0.0009;THETA=0.0009;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 30926706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.3191;AVGPOST=0.9888;RSQ=0.9822;ERATE=0.0005;THETA=0.0005;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 30926721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30926997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9015;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30927004 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3213;AVGPOST=0.9905;RSQ=0.9853;ERATE=0.0005;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 30927076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.3214;AVGPOST=0.9868;RSQ=0.9780;ERATE=0.0008;THETA=0.0002;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 30927146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0061;AVGPOST=0.9975;RSQ=0.8272;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30927399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0188;AVGPOST=0.9978;RSQ=0.9522;ERATE=0.0005;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30927430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0060;AVGPOST=0.9939;RSQ=0.5797;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30927503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30927760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0087;AVGPOST=0.9952;RSQ=0.8010;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30927851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30928084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4540;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30928110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9208;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30928125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.3003;AVGPOST=0.9914;RSQ=0.9856;ERATE=0.0006;THETA=0.0004;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 30928226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6237;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30928267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0189;AVGPOST=0.9969;RSQ=0.9288;ERATE=0.0009;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30928409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0143;AVGPOST=0.9954;RSQ=0.8700;ERATE=0.0006;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30928496 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.2992;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30928565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6565;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30928746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.962;LDAF=0.4343;AVGPOST=0.9650;RSQ=0.9551;ERATE=0.0043;THETA=0.0003;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 30928747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6491;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30928858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0123;AVGPOST=0.9987;RSQ=0.9499;ERATE=0.0004;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30928961 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0142;AVGPOST=0.9976;RSQ=0.9315;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 30929049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9685;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30929059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4902;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30929133 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7837;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30929134 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0512;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 30929200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6820;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30929264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9615;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30929299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7707;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30929500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3834;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30929503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30929549 . CTT C 32307 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.2749;AVGPOST=0.9832;RSQ=0.9704;ERATE=0.0021;THETA=0.0007;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 30929604 . GT G 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8800;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30929742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30929800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5319;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30929905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30929934 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.655;LDAF=0.0385;AVGPOST=0.9736;RSQ=0.7190;ERATE=0.0008;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 30929956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1213;AVGPOST=0.9892;RSQ=0.9695;ERATE=0.0007;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 30930052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9975;RSQ=0.8741;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30930216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0078;AVGPOST=0.9922;RSQ=0.6527;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30930232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.705;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6087;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30930474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30930475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30930479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0455;AVGPOST=0.9991;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 30930530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0118;AVGPOST=0.9985;RSQ=0.9466;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30930570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6889;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30930578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8947;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30930606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30930655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7737;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30930837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.491;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6031;ERATE=0.0008;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30930889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30930899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3094;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 30930976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7635;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30931018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0141;AVGPOST=0.9924;RSQ=0.7871;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30931246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8575;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30931250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3082;AVGPOST=0.9926;RSQ=0.9876;ERATE=0.0007;THETA=0.0007;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 30931330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8779;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30931382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0059;AVGPOST=0.9961;RSQ=0.7335;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30931393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3839;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30931453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.3019;AVGPOST=0.9745;RSQ=0.9568;ERATE=0.0050;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 30931460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5217;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30931486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9297;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30931515 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.950;LDAF=0.2101;AVGPOST=0.9862;RSQ=0.9687;ERATE=0.0010;THETA=0.0008;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 30931519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5018;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30931649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.479;LDAF=0.9650;AVGPOST=0.9593;RSQ=0.5472;ERATE=0.0080;THETA=0.0005;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 30931726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3137;AVGPOST=0.9952;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 30931742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7568;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30931771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30931846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5166;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30931871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30931888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.900;LDAF=0.3761;AVGPOST=0.9186;RSQ=0.8664;ERATE=0.0367;THETA=0.0004;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 30931894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0076;AVGPOST=0.9980;RSQ=0.8875;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30932052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4822;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30932059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2176;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 30932224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30932233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30932236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30932282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.3798;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30932305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30932306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30932318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0067;AVGPOST=0.9941;RSQ=0.6521;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30932378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.956;LDAF=0.3008;AVGPOST=0.9892;RSQ=0.9819;ERATE=0.0007;THETA=0.0005;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 30932395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0138;AVGPOST=0.9979;RSQ=0.9410;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 30932396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30932404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30932444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0208;AVGPOST=0.9966;RSQ=0.9355;ERATE=0.0008;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 30932485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8367;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30932524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7874;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30932553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30932557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9503;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30932598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0424;AVGPOST=0.9985;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 30932609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30932804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7579;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30932863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7903;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30932927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30932956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3121;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 30933168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6916;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30933278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6297;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30933336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30933383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30933386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3106;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 30933424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30933457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30933458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30933550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30933594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30933736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3101;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 30933756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30933889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9222;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30933984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8729;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 30933990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6100;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30934026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8729;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 30934089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30934128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8730;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 30934135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8395;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30934144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30934145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30934174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0055;AVGPOST=0.9969;RSQ=0.7890;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30934233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30934317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30934338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30934349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30934444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6352;ERATE=0.0007;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30934507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6346;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30934571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30934737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8608;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30934878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30934896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30934913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9949;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30935009 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9904;AVGPOST=0.9945;RSQ=0.7602;ERATE=0.0005;THETA=0.0004;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 30935119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4209;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30935199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30935260 . CA C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8088;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30935264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30935409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30935549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8052;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30935635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30935648 . AC A 1260 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30935678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30935679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7632;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30935697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9949;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30935710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30935711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1205;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 30935733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30935750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30935765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7925;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30935822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30935920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1225;AVGPOST=0.9959;RSQ=0.9886;ERATE=0.0007;THETA=0.0005;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 30936101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9501;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30936220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9743;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30936335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8833;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30936413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9949;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30936455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9946;AVGPOST=0.9993;RSQ=0.9422;ERATE=0.0004;THETA=0.0004;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30936506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30936548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6244;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8876;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30936563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30936622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30936774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30936832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30937073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5592;AVGPOST=0.9888;RSQ=0.9861;ERATE=0.0073;THETA=0.0002;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 30937129 . GATA G 1778 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30937225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0131;AVGPOST=0.9974;RSQ=0.9276;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30937247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8752;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30937289 . GTGA G 1279 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30937317 . TATGGTG T 32493 PASS INDEL;BAVGPOST=0.987;BRSQ=0.965;LDAF=0.2150;AVGPOST=0.9915;RSQ=0.9818;ERATE=0.0011;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 30937346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30937364 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1221;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 30937415 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9949;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30937494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30937526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30937546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30937552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5615;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0001;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 30937565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9753;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30937680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.8719;AVGPOST=0.9963;RSQ=0.9890;ERATE=0.0009;THETA=0.0006;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 30937698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6390;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30937825 rs72199031 C CA 2522 PASS INDEL;BAVGPOST=0.662;BRSQ=0.381;LDAF=0.6492;AVGPOST=0.6732;RSQ=0.4169;ERATE=0.0285;THETA=0.0002;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 30937840 . A AG 52 PASS INDEL;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0107;AVGPOST=0.9938;RSQ=0.7738;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30937950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30937994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8534;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30938013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6713;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30938112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8636;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30938135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.763;LDAF=0.0085;AVGPOST=0.9958;RSQ=0.8211;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30938140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4626;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30938260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2197;AVGPOST=0.9965;RSQ=0.9925;ERATE=0.0019;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 30938347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3027;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 30938457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3147;AVGPOST=0.9923;RSQ=0.9877;ERATE=0.0015;THETA=0.0003;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 30938590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3110;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0040;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 30938602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30938667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9949;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30938689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9463;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30938800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7178;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30938845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30938948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0134;AVGPOST=0.9935;RSQ=0.7994;ERATE=0.0017;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30939085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.9898;AVGPOST=0.9924;RSQ=0.7502;ERATE=0.0012;THETA=0.0005;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 30939086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0196;AVGPOST=0.9978;RSQ=0.9513;ERATE=0.0006;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30939152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0379;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0003;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 30939232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9361;ERATE=0.0004;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30939278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30939449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30939456 . GA G 859 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9985;RSQ=0.9329;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30939467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30939642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8105;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30939713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3107;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 30939736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30939822 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.567;LDAF=0.0100;AVGPOST=0.9876;RSQ=0.5186;ERATE=0.0049;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30939827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30939872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1216;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 30940057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3087;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0006;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 30940120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30940214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30940221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0111;AVGPOST=0.9940;RSQ=0.7923;ERATE=0.0015;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30940282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6121;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30940299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6612;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30940345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9748;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30940350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6656;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30940468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6698;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30940472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0105;AVGPOST=0.9993;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30940483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7258;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30940549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9687;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30940599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9507;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30940609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.9940;AVGPOST=0.9996;RSQ=0.9710;ERATE=0.0004;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 30940617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30940651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8313;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30940655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30940664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30940695 . C CG 26644 PASS INDEL;BAVGPOST=0.981;BRSQ=0.969;LDAF=0.5516;AVGPOST=0.9574;RSQ=0.9430;ERATE=0.0084;THETA=0.0012;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 30940739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6886;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30940785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4845;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30940813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9111;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30940823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30940894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2780;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 30940937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0341;AVGPOST=0.9978;RSQ=0.9776;ERATE=0.0004;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 30941023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5619;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 30941054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30941146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8080;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30941270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9417;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30941304 . GC G 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30941348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6824;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30941409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4814;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30941513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8326;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30941541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.563;LDAF=0.0253;AVGPOST=0.9734;RSQ=0.5928;ERATE=0.0082;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30941610 . TCC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.5762;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30941636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8866;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=1936;AN=2184 GT:DS:GL:BD 0.88644689 1
1 30941730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30941817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0526;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 30941930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30942106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0452;AVGPOST=0.9951;RSQ=0.9565;ERATE=0.0006;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 30942154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.716;LDAF=0.9861;AVGPOST=0.9941;RSQ=0.8360;ERATE=0.0004;THETA=0.0006;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 30942155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.2971;AVGPOST=0.9872;RSQ=0.9795;ERATE=0.0005;THETA=0.0011;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 30942234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0134;AVGPOST=0.9983;RSQ=0.9414;ERATE=0.0009;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30942237 . ATGCC A 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4571;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30942285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8845;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30942368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7416;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30942433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5788;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30942434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2774;AVGPOST=0.9960;RSQ=0.9921;ERATE=0.0006;THETA=0.0031;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 30942438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9451;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30942537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.9940;AVGPOST=0.9996;RSQ=0.9682;ERATE=0.0003;THETA=0.0008;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 30942564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7493;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30942635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30942642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9442;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30942706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 30942711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0139;AVGPOST=0.9973;RSQ=0.9234;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 30942871 . T TC 11 PASS INDEL;BAVGPOST=0.998;BRSQ=0.343;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30942902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5391;AVGPOST=0.9918;RSQ=0.9888;ERATE=0.0010;THETA=0.0082;AC=1177;AN=2184 GT:DS:GL:BD 0.53891939 1
1 30943023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30943112 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30943117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9697;AVGPOST=0.9986;RSQ=0.9851;ERATE=0.0004;THETA=0.0056;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 30943195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30943353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9770;ERATE=0.0003;THETA=0.0043;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30943438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30943443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30943484 . TC T 7841 PASS INDEL;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0587;AVGPOST=0.9928;RSQ=0.9586;ERATE=0.0004;THETA=0.0053;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 30943578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0003;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30943629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9569;ERATE=0.0003;THETA=0.0102;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30943632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2930;AVGPOST=0.9873;RSQ=0.9794;ERATE=0.0004;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 30943655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6865;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30943764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0093;AVGPOST=0.9977;RSQ=0.9011;ERATE=0.0006;THETA=0.0055;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30943776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0137;AVGPOST=0.9967;RSQ=0.9094;ERATE=0.0004;THETA=0.0021;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30943830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.592;LDAF=0.0066;AVGPOST=0.9900;RSQ=0.3692;ERATE=0.0018;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30943938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9526;ERATE=0.0004;THETA=0.0062;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30943942 . C CA 242 PASS INDEL;BAVGPOST=0.984;BRSQ=0.501;LDAF=0.0239;AVGPOST=0.9675;RSQ=0.4564;ERATE=0.0075;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30943945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.945;LDAF=0.0287;AVGPOST=0.9970;RSQ=0.9594;ERATE=0.0006;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 30943956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7684;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30943966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30943970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0005;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.2942;AVGPOST=0.9917;RSQ=0.9863;ERATE=0.0005;THETA=0.0158;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 30944036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8302;ERATE=0.0003;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30944100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30944151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0210;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0004;THETA=0.0029;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 30944155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8968;ERATE=0.0004;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30944278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30944289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30944362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.6661;AVGPOST=0.9880;RSQ=0.9819;ERATE=0.0012;THETA=0.0005;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 30944363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5775;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6532;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0090;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30944512 . GTACT G 1889 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9024;ERATE=0.0003;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30944536 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30944630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30944673 . G GT 71 PASS INDEL;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0054;AVGPOST=0.9954;RSQ=0.6858;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30944674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9616;ERATE=0.0003;THETA=0.0050;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30944681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7878;ERATE=0.0004;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30944737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.9906;AVGPOST=0.9994;RSQ=0.9740;ERATE=0.0003;THETA=0.0102;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 30944867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3110;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0005;THETA=0.0047;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 30944881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.468;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6919;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30944901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30944919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30945022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6307;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8924;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30945049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945136 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5604;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30945264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0911;AVGPOST=0.9973;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 30945313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3066;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0011;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 30945383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2883;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0007;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 30945452 . T TG 6685 PASS INDEL;BAVGPOST=0.970;BRSQ=0.925;LDAF=0.2150;AVGPOST=0.9738;RSQ=0.9466;ERATE=0.0012;THETA=0.0009;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 30945454 rs76938503 G GC 26800 PASS INDEL;BAVGPOST=0.975;BRSQ=0.946;LDAF=0.2324;AVGPOST=0.9840;RSQ=0.9704;ERATE=0.0005;THETA=0.0001;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 30945455 . C CG 7796 PASS INDEL;BAVGPOST=0.970;BRSQ=0.926;LDAF=0.2157;AVGPOST=0.9762;RSQ=0.9518;ERATE=0.0007;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 30945457 . C CT 6385 PASS INDEL;BAVGPOST=0.968;BRSQ=0.916;LDAF=0.2145;AVGPOST=0.9763;RSQ=0.9525;ERATE=0.0006;THETA=0.0017;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 30945481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7717;ERATE=0.0010;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30945486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3553;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0007;THETA=0.0003;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 30945544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30945582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30945642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9186;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30945720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2222;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 30945863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30945925 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0896;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 30945948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8204;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30945959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30945974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2548;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 30945990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30946012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30946013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0162;AVGPOST=0.9988;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30946093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30946113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0105;AVGPOST=0.9983;RSQ=0.9430;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30946219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30946241 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5906;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 30946372 . CA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5494;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30946455 . A AT 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3679;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30946473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2293;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 30946543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5451;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30946550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30946556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30946775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2829;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 30946784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30946801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9176;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30946893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30946987 . T TCAC 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30946992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30947021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30947038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7679;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30947107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.617;LDAF=0.0251;AVGPOST=0.9761;RSQ=0.6385;ERATE=0.0113;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30947122 MERGED_DEL_2_2722 TGACACCTACATGAAGGTTCTGGGGTCCAACATTCTGGGGCACACTTGGATATTGTTTCTATAGTGACGGACAACTGGCACTGCCTTCCAAGGGGCAGACACAGCAACAGACCTGCAAGGATTGGGCTTTTCTCCTCCGTATGTGTCATCCTCTGGACAAGGATGCCACAAGGTCACTTGCATTCCACAA T . . SV;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;CIEND=-17,33;CIPOS=-18,19;END=30950772;HOMLEN=1;HOMSEQ=G;SOURCE=GenomeStrip_30947085_30950757;SVL GT:DS:GL:BD 0.00091575 0
1 30947164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30947189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8983;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30947222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6767;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 30947259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30947327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 30947343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30947516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9853;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 30947526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30947600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30947632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8918;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30947652 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30947670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30947717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30947841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30947851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30947868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2402;AVGPOST=0.9962;RSQ=0.9921;ERATE=0.0007;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 30947889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0103;AVGPOST=0.9983;RSQ=0.9437;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30948088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0102;AVGPOST=0.9957;RSQ=0.8363;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30948135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0895;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 30948180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3074;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 30948270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9755;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 30948288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6818;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30948336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 30948342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30948385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30948452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 30948517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30948645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30948648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0189;AVGPOST=0.9966;RSQ=0.9369;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 30948709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3077;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 30948765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8350;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30948976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2835;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 30949029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1196;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 30949044 . C CA 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5742;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30949081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0124;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30949115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7779;ERATE=0.0014;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30949127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30949274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6975;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0023;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 30949282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30949369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.9936;AVGPOST=0.9984;RSQ=0.9173;ERATE=0.0003;THETA=0.0007;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 30949491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30949507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30949558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4143;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30949644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30949755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30949834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8576;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30949987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30950131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0040;AVGPOST=0.9961;RSQ=0.5855;ERATE=0.0016;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30950142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5594;ERATE=0.0015;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30950170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2880;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 30950183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0382;AVGPOST=0.9956;RSQ=0.9570;ERATE=0.0006;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 30950237 . CTG C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7215;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30950259 . ATGTT A 457 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8218;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30950267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8745;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30950302 . TA T 53 PASS INDEL;BAVGPOST=0.996;BRSQ=0.765;LDAF=0.0119;AVGPOST=0.9908;RSQ=0.6647;ERATE=0.0051;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30950313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.862;LDAF=0.0249;AVGPOST=0.9948;RSQ=0.9097;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 30950314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30950379 . CTG C 884 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9139;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30950475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2848;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0005;THETA=0.0021;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 30950550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30950809 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0167;AVGPOST=0.9983;RSQ=0.9572;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30950831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5013;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30950840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30950877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6242;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30950929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7467;ERATE=0.0008;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30951033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9276;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30951054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8458;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30951117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30951140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30951149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5318;AVGPOST=0.9960;RSQ=0.9941;ERATE=0.0007;THETA=0.0003;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 30951153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5131;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30951173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30951197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5336;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30951214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2916;AVGPOST=0.9943;RSQ=0.9899;ERATE=0.0015;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 30951311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30951379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30951380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30951563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30951575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6640;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1450;AN=2184 GT:DS:GL:BD 0.66391939 1
1 30951861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0295;AVGPOST=0.9942;RSQ=0.9189;ERATE=0.0005;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 30951872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0152;AVGPOST=0.9985;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30951882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5063;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30951988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30952109 . AC A 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9946;RSQ=0.4893;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30952161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30952494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.518;BRSQ=0.191;LDAF=0.5199;AVGPOST=0.6193;RSQ=0.3469;ERATE=0.0260;THETA=0.0006;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 30952615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8070;ERATE=0.0006;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30952770 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30952948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8504;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30953043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30953077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9803;AVGPOST=0.9990;RSQ=0.9810;ERATE=0.0004;THETA=0.0003;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 30953162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30953229 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3259;AVGPOST=0.9925;RSQ=0.9859;ERATE=0.0015;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 30953235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8777;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30953262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9793;AVGPOST=0.9977;RSQ=0.9566;ERATE=0.0005;THETA=0.0004;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 30953268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9793;AVGPOST=0.9987;RSQ=0.9741;ERATE=0.0005;THETA=0.0003;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 30953460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.523;LDAF=0.0072;AVGPOST=0.9955;RSQ=0.7530;ERATE=0.0008;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30953473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9795;AVGPOST=0.9983;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 30953474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0262;AVGPOST=0.9968;RSQ=0.9507;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 30953552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30953910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 30953964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 30954082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30954133 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30954140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9368;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30954148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0080;AVGPOST=0.9992;RSQ=0.9524;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30954158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30954354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9819;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30954373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9806;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 30954409 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9804;AVGPOST=0.9992;RSQ=0.9819;ERATE=0.0004;THETA=0.0005;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 30954776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30954779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4630;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30954792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30954865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2858;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 30954883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30954904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.9801;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 30954932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30954967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4782;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30954982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0049;AVGPOST=0.9938;RSQ=0.4413;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30955002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0019;AVGPOST=0.9969;RSQ=0.3912;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30955097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30955169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9803;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 30955289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9619;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30955453 rs3075393 C CCTAT 166797 PASS INDEL;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.9730;AVGPOST=0.9977;RSQ=0.9682;ERATE=0.0005;THETA=0.0002;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 30955525 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9803;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 30955583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9015;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30955822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30956104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0125;AVGPOST=0.9985;RSQ=0.9495;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30956297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5321;AVGPOST=0.9981;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 30956402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30956412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2897;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 30956457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2887;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 30956579 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30956632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8773;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30956654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30956692 . GGA G 6 PASS INDEL;BAVGPOST=0.975;BRSQ=0.089;LDAF=0.0394;AVGPOST=0.9399;RSQ=0.3769;ERATE=0.0018;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30956705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30956904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5313;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 30956966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0506;AVGPOST=0.9981;RSQ=0.9856;ERATE=0.0004;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 30957042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30957046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8716;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30957073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30957104 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30957105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30957216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3548;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 30957326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9627;AVGPOST=0.9992;RSQ=0.9910;ERATE=0.0004;THETA=0.0003;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 30957390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5651;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30957487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4233;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30957781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8169;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30957813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0235;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30957821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6677;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 30957884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9430;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30957932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9703;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30957949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30957975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7491;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30957976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9254;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30958082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30958101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30958158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30958183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6863;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30958199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30958275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5525;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30958356 . CCTT C 3048 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9977;RSQ=0.9581;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30958453 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30958497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30958525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5570;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30958595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30958596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30958623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2386;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 30958665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8406;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30958720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1174;AVGPOST=0.9969;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 30958818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30958820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30958824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0912;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 30958889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 30958903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30958993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30959071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30959111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30959123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30959179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30959251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30959259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30959273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30959351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30959453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9262;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30959597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.4907;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30959632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6686;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30959763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30959898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.0905;AVGPOST=0.9978;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 30960074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30960080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6386;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30960215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30960221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30960239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7402;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30960317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30960358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8379;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30960426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30960446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3827;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 30960479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30960509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0208;AVGPOST=0.9994;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 30960556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1174;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0036;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 30960616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30960618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3083;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 30960744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0284;AVGPOST=0.9966;RSQ=0.9517;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30960834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1175;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0025;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 30960931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8068;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30961035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9647;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 30961041 . TACTC T 1289 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8515;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30961141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9740;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30961142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30961150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30961159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9644;AVGPOST=0.9990;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 30961210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9615;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 30961289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0107;AVGPOST=0.9982;RSQ=0.9298;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30961364 . GTGA G 608 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7586;ERATE=0.0008;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30961412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30961424 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30961949 rs80266565 T TA 7006 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0257;AVGPOST=0.9982;RSQ=0.9699;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 30962044 . C CTGA 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30962106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2859;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 30962167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6754;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30962276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30962306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30962403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0919;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 30962474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4291;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0006;THETA=0.0006;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 30962722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6407;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30962742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30962777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30962780 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30963042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30963087 . AGT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5580;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30963186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0105;AVGPOST=0.9985;RSQ=0.9430;ERATE=0.0004;THETA=0.0023;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30963199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30963242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 30963267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8248;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30963342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4296;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0006;THETA=0.0003;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 30963361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4294;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0006;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 30963390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6674;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30963394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30963461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4613;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30963494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30963530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0127;AVGPOST=0.9973;RSQ=0.9146;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30963545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30963575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7917;ERATE=0.0005;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30963660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.8995;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30963688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30963760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0142;AVGPOST=0.9965;RSQ=0.9016;ERATE=0.0006;THETA=0.0016;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 30964035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9668;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30964250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8203;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30964305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5304;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 30964340 . GC G 364 PASS INDEL;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0063;AVGPOST=0.9958;RSQ=0.7258;ERATE=0.0011;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30964343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8885;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30964399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2869;AVGPOST=0.9953;RSQ=0.9918;ERATE=0.0007;THETA=0.0006;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 30964412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.4307;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0005;THETA=0.0007;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 30964420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9613;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30964421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8687;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30964452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4381;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30964527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0121;AVGPOST=0.9973;RSQ=0.9100;ERATE=0.0009;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 30964561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9165;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30964570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30964649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30964698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30964701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30964747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30964870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30964913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8532;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30964995 . TAG T 131 PASS INDEL;BAVGPOST=0.983;BRSQ=0.611;LDAF=0.0324;AVGPOST=0.9660;RSQ=0.5553;ERATE=0.0112;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 30965011 . AAG A 12 PASS INDEL;BAVGPOST=0.977;BRSQ=0.089;LDAF=0.1043;AVGPOST=0.8341;RSQ=0.2815;ERATE=0.0108;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 30965028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9523;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30965089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30965200 . A AGTCC 23490 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0929;AVGPOST=0.9973;RSQ=0.9880;ERATE=0.0007;THETA=0.0006;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 30965207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6112;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30965291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30965330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0013;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30965337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9836;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30965393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9634;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 30965461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4287;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 30965471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6144;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30965495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4596;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30965526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30965542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6143;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30965606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30965677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30965724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30965800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30965805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30965818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30965844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8833;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30965878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30966019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8091;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30966122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4294;AVGPOST=0.9960;RSQ=0.9936;ERATE=0.0003;THETA=0.0011;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 30966129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4121;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 30966135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9097;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30966171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30966243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30966273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30966274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8752;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30966287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30966300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.800;LDAF=0.0105;AVGPOST=0.9967;RSQ=0.8682;ERATE=0.0006;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30966308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.8971;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30966339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0091;AVGPOST=0.9914;RSQ=0.6285;ERATE=0.0010;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30966393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.771;LDAF=0.0924;AVGPOST=0.9658;RSQ=0.8522;ERATE=0.0006;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 30966499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30966543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8977;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30966590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.449;LDAF=0.0033;AVGPOST=0.9944;RSQ=0.3296;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30966591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.823;LDAF=0.0109;AVGPOST=0.9970;RSQ=0.8975;ERATE=0.0005;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30966635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.884;LDAF=0.3901;AVGPOST=0.9438;RSQ=0.9122;ERATE=0.0035;THETA=0.0005;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 30966655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0010;AVGPOST=0.9983;RSQ=0.3464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30966656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0060;AVGPOST=0.9947;RSQ=0.6508;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30966673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.783;LDAF=0.9450;AVGPOST=0.9784;RSQ=0.8588;ERATE=0.0011;THETA=0.0009;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 30966722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0082;AVGPOST=0.9898;RSQ=0.5314;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30966797 . CA C 277 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0048;AVGPOST=0.9962;RSQ=0.7096;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30966825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.859;LDAF=0.3751;AVGPOST=0.9172;RSQ=0.8685;ERATE=0.0063;THETA=0.0008;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 30966890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.450;LDAF=0.0110;AVGPOST=0.9842;RSQ=0.4720;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30966891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9319;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30966910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.916;LDAF=0.3839;AVGPOST=0.9511;RSQ=0.9215;ERATE=0.0052;THETA=0.0003;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 30966919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9473;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30966970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9273;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30966999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.609;LDAF=0.0062;AVGPOST=0.9937;RSQ=0.5909;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30967107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.776;LDAF=0.0220;AVGPOST=0.9902;RSQ=0.8580;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 30967110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.888;LDAF=0.0252;AVGPOST=0.9976;RSQ=0.9588;ERATE=0.0005;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 30967130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.399;LDAF=0.0114;AVGPOST=0.9883;RSQ=0.5772;ERATE=0.0009;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30967135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.698;LDAF=0.8133;AVGPOST=0.8069;RSQ=0.5137;ERATE=0.0247;THETA=0.0003;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 30967212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6094;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30967265 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30967287 . G GA 246 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8581;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30967386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1017;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 30967391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30967410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8874;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30967430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30967441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30967442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30967488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5298;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30967504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8520;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30967524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8745;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30967555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5910;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30967629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2883;AVGPOST=0.9897;RSQ=0.9821;ERATE=0.0016;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 30967651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9478;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30967652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7884;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30967670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8698;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30967686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6719;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30967701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7894;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30967786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.5890;ERATE=0.0009;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30967912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0046;AVGPOST=0.9966;RSQ=0.7053;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30967963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.929;LDAF=0.0808;AVGPOST=0.9933;RSQ=0.9709;ERATE=0.0006;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 30967970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0034;AVGPOST=0.9946;RSQ=0.4809;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30968035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30968036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30968056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3607;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30968284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.4054;AVGPOST=0.9876;RSQ=0.9804;ERATE=0.0011;THETA=0.0008;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 30968354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0907;AVGPOST=0.9945;RSQ=0.9805;ERATE=0.0005;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 30968355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9481;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30969080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30969271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9126;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30969298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30969305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30969310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30969409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0910;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 30969443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30969458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0899;AVGPOST=0.9969;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 30969475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2833;AVGPOST=0.9953;RSQ=0.9917;ERATE=0.0005;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 30969536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7097;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30969537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7887;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30969687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30969751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8294;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30969956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30969962 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6964;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30969968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.593;LDAF=0.0075;AVGPOST=0.9915;RSQ=0.5202;ERATE=0.0017;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30970727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30970755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30970778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.4321;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0004;THETA=0.0015;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 30970786 . GA G 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0036;AVGPOST=0.9956;RSQ=0.5093;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30970832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4336;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 30970873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9602;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30971029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.924;LDAF=0.2742;AVGPOST=0.9577;RSQ=0.9237;ERATE=0.0066;THETA=0.0002;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 30971835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0072;AVGPOST=0.9981;RSQ=0.8857;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30971891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4306;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 30971900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30971926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30971944 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4850;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30971974 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7055;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30972108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.2874;ERATE=0.0009;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30972138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4106;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0007;THETA=0.0006;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 30972232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0034;AVGPOST=0.9956;RSQ=0.5118;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30972235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9684;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30972250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8772;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30972254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.690;LDAF=0.0143;AVGPOST=0.9894;RSQ=0.7166;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 30972254 . GA G 24156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.9961;AVGPOST=0.9973;RSQ=0.7146;ERATE=0.0004;THETA=0.0005;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 30972257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3816;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30972333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9786;ERATE=0.0004;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30972406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9487;ERATE=0.0005;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30972423 . CA C 123 PASS INDEL;BAVGPOST=0.994;BRSQ=0.572;LDAF=0.0118;AVGPOST=0.9894;RSQ=0.6539;ERATE=0.0012;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30972427 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4175;AVGPOST=0.9930;RSQ=0.9899;ERATE=0.0005;THETA=0.0002;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 30972431 . AT A 383 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9016;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30972526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30972556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6366;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30972575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9681;AVGPOST=0.9994;RSQ=0.9908;ERATE=0.0004;THETA=0.0007;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 30972677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0060;AVGPOST=0.9988;RSQ=0.9271;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30972749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8423;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30972756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7754;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30972981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5005;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30972987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2872;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 30973002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30973035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973121 rs57194535 TTTTTTG T 32050 PASS INDEL;BAVGPOST=0.932;BRSQ=0.423;LDAF=0.9107;AVGPOST=0.8869;RSQ=0.4477;ERATE=0.0126;THETA=0.0004;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 30973139 . G GT 161 PASS INDEL;BAVGPOST=0.941;BRSQ=0.354;LDAF=0.0840;AVGPOST=0.8905;RSQ=0.4364;ERATE=0.0111;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 30973231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9934;RSQ=0.5927;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30973355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.943;LDAF=0.4171;AVGPOST=0.9841;RSQ=0.9760;ERATE=0.0005;THETA=0.0002;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 30973359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.944;LDAF=0.4142;AVGPOST=0.9749;RSQ=0.9631;ERATE=0.0017;THETA=0.0002;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 30973367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8082;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30973491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.0910;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 30973500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30973554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5298;AVGPOST=0.9971;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 30973604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2896;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 30973649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30973655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973722 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30973735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4308;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 30973851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.5082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30973854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30973967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9992;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 30973976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30974024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30974058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2941;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 30974135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7506;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30974167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4097;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 30974192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974222 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30974230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30974270 . TG T 331 PASS INDEL;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0067;AVGPOST=0.9963;RSQ=0.7938;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30974277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30974381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9523;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30974475 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9645;AVGPOST=0.9985;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 30974492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30974606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2877;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 30974719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0004;THETA=0.0006;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 30974790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.892;LDAF=0.0415;AVGPOST=0.9939;RSQ=0.9435;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30974852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6974;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30974929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30974961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30975036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.4149;AVGPOST=0.9871;RSQ=0.9796;ERATE=0.0006;THETA=0.0005;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 30975055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.762;LDAF=0.9337;AVGPOST=0.9551;RSQ=0.7177;ERATE=0.0122;THETA=0.0004;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 30975098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30975099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5898;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30975127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2857;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 30975136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30975154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30975247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30975252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30975277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30975406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7593;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30975420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9049;ERATE=0.0003;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30975562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30975782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30975828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30975843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5893;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30975881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30975912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2372;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 30975928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2265;AVGPOST=0.9972;RSQ=0.9940;ERATE=0.0005;THETA=0.0002;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 30976011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9325;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30976075 . CTCTT C 1578 PASS INDEL;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0109;AVGPOST=0.9967;RSQ=0.8719;ERATE=0.0006;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30976102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 30976135 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8282;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30976339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8345;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30976389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0317;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0004;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 30976433 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 30976446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0290;AVGPOST=0.9965;RSQ=0.9531;ERATE=0.0005;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 30976480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30976489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30976506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30976542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0343;AVGPOST=0.9989;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 30976543 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1262;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 30976543 . TA T 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5018;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30976617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0921;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 30976630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7591;ERATE=0.0012;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30976658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30976691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30976724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3931;AVGPOST=0.9949;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 30976805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9994;RSQ=0.9687;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30976819 . TGA T 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30976920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30976930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8955;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30976951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30977005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8772;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30977032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8806;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30977043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9264;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30977217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30977218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0970;AVGPOST=0.9969;RSQ=0.9902;ERATE=0.0006;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 30977334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30977368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30977410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2863;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 30977435 . GA G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6624;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30977457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1123;ERATE=0.0003;THETA=0.0026;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 30977479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2743;AVGPOST=0.9935;RSQ=0.9900;ERATE=0.0006;THETA=0.0005;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 30977654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0228;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30977655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6805;ERATE=0.0013;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30977721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.839;LDAF=0.0174;AVGPOST=0.9943;RSQ=0.8618;ERATE=0.0005;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30977730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6801;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30977742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2895;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 30977779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30977933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30977967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2371;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 30978090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6230;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30978128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5343;AVGPOST=0.9951;RSQ=0.9926;ERATE=0.0006;THETA=0.0004;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 30978171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30978338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6474;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30978458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30978464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8917;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30978527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9102;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30978591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30978623 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30978658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30978672 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8723;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 30978705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30978721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30978749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30978787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30978896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5727;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30979171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5894;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30979211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8287;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30979222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0082;AVGPOST=0.9967;RSQ=0.8362;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30979276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0236;AVGPOST=0.9979;RSQ=0.9653;ERATE=0.0005;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 30979343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8872;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30979420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2891;AVGPOST=0.9925;RSQ=0.9871;ERATE=0.0006;THETA=0.0004;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 30979434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7355;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30979463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8760;ERATE=0.0004;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30979578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8517;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30979684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30979735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30979933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5778;ERATE=0.0004;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30980076 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2612;AVGPOST=0.9970;RSQ=0.9943;ERATE=0.0005;THETA=0.0078;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 30980092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9327;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30980131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2824;AVGPOST=0.9937;RSQ=0.9892;ERATE=0.0009;THETA=0.0023;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 30980177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0082;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30980212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9266;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30980224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30980229 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30980235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6192;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30980311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.949;LDAF=0.0533;AVGPOST=0.9927;RSQ=0.9489;ERATE=0.0007;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 30980364 . CT C 332 PASS INDEL;BAVGPOST=0.994;BRSQ=0.786;LDAF=0.0119;AVGPOST=0.9980;RSQ=0.9242;ERATE=0.0005;THETA=0.0035;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 30980614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30980670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30980708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.8183;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30980763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0108;AVGPOST=0.9984;RSQ=0.9400;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30980766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5799;AVGPOST=0.9929;RSQ=0.9899;ERATE=0.0009;THETA=0.0005;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 30980767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30980786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2647;AVGPOST=0.9948;RSQ=0.9902;ERATE=0.0007;THETA=0.0006;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 30980830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30980834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0081;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30980936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6070;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30980950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30980958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7877;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30980981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30980984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30981013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2643;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0006;THETA=0.0010;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 30981050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30981072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0445;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 30981125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9611;AVGPOST=0.9984;RSQ=0.9853;ERATE=0.0003;THETA=0.0016;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 30981194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0415;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0022;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 30981284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30981299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.734;LDAF=0.0070;AVGPOST=0.9952;RSQ=0.7194;ERATE=0.0034;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30981446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6951;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30981512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8902;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30981602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30981662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2378;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 30981716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30981766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30981793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8249;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30981821 . TG T 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6925;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30981921 . GA G 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5870;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30981935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9654;AVGPOST=0.9991;RSQ=0.9903;ERATE=0.0003;THETA=0.0032;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 30981994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30982101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30982230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30982300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30982431 . TGGA T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.455;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6223;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30982462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0522;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 30982612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2638;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 30982669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 30982914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9652;AVGPOST=0.9990;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 30982918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30983006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5936;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30983098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9480;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30983104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0513;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 30983141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9259;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30983207 rs111518879 TATACCAA T 4822 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0520;AVGPOST=0.9989;RSQ=0.9906;ERATE=0.0004;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 30983261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5689;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 30983269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9640;AVGPOST=0.9983;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 30983361 . T TA 134 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6800;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30983437 . AT A 181 PASS INDEL;BAVGPOST=0.970;BRSQ=0.353;LDAF=0.0539;AVGPOST=0.9283;RSQ=0.4547;ERATE=0.0015;THETA=0.0016;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 30983439 rs113264106 TA T 1419 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9612;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30983495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30983521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0545;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 30983635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30983641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30983684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0246;AVGPOST=0.9968;RSQ=0.9478;ERATE=0.0004;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30983786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5322;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 30983817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30983895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30983921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30984037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9172;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30984172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6119;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30984310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984497 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30984542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4270;AVGPOST=0.9952;RSQ=0.9931;ERATE=0.0004;THETA=0.0017;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 30984564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0265;AVGPOST=0.9977;RSQ=0.9662;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 30984663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2778;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 30984680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30984741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30984757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3003;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0006;THETA=0.0015;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 30984777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30984823 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30984987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9288;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30985024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9462;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30985026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9542;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30985036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9343;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30985076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6626;AVGPOST=0.9966;RSQ=0.9949;ERATE=0.0004;THETA=0.0102;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 30985146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7944;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30985257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7487;ERATE=0.0008;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30985320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30985442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30985629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2864;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 30985683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.9949;AVGPOST=0.9990;RSQ=0.9232;ERATE=0.0004;THETA=0.0025;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 30985724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30985786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8261;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30985821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6311;AVGPOST=0.9935;RSQ=0.9899;ERATE=0.0012;THETA=0.0048;AC=1378;AN=2184 GT:DS:GL:BD 0.63095236 1
1 30985854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8423;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0010;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 30985863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0206;AVGPOST=0.9955;RSQ=0.9140;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 30985902 . CTG C 2094 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9322;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30985909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30985916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4868;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30985927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0102;AVGPOST=0.9988;RSQ=0.9471;ERATE=0.0008;THETA=0.0032;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30985991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8851;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30986027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8947;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30986185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2761;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 30986215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5805;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30986248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8385;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30986292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30986295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0198;AVGPOST=0.9978;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30986296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6876;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30986389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8549;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1868;AN=2184 GT:DS:GL:BD 0.85531133 1
1 30986403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4676;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30986559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0984;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 30986692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30986704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30986720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6750;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30986735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0061;AVGPOST=0.9969;RSQ=0.8058;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30986783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30986859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30986939 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9167;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 30986969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9148;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30987060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2725;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 30987080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30987097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3739;AVGPOST=0.9964;RSQ=0.9954;ERATE=0.0006;THETA=0.0019;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 30987151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3732;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0005;THETA=0.0008;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 30987156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9168;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 30987181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9168;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 30987192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6268;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30987244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5375;AVGPOST=0.9977;RSQ=0.9972;ERATE=0.0004;THETA=0.0078;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 30987271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7776;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30987333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2653;AVGPOST=0.9912;RSQ=0.9832;ERATE=0.0012;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 30987334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.6587;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0006;THETA=0.0025;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 30987350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0160;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30987406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9613;ERATE=0.0003;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30987414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2849;AVGPOST=0.9952;RSQ=0.9921;ERATE=0.0005;THETA=0.0014;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 30987571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30987661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5424;AVGPOST=0.9966;RSQ=0.9958;ERATE=0.0004;THETA=0.0019;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 30987720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2550;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0004;THETA=0.0077;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 30987778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9665;AVGPOST=0.9986;RSQ=0.9841;ERATE=0.0003;THETA=0.0030;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 30987910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6944;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30987927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30987934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7428;ERATE=0.0004;THETA=0.0202;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30987948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8780;ERATE=0.0004;THETA=0.0106;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30987983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8908;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30988011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0101;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30988024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0220;AVGPOST=0.9985;RSQ=0.9772;ERATE=0.0005;THETA=0.0078;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 30988041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0256;AVGPOST=0.9980;RSQ=0.9695;ERATE=0.0004;THETA=0.0130;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 30988101 . T TG 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0062;AVGPOST=0.9947;RSQ=0.6140;ERATE=0.0012;THETA=0.0136;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30988213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.930;LDAF=0.3624;AVGPOST=0.9610;RSQ=0.9429;ERATE=0.0095;THETA=0.0116;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 30988227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8125;ERATE=0.0003;THETA=0.0153;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30988339 . TG T 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3860;ERATE=0.0006;THETA=0.0161;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1122;AVGPOST=0.9964;RSQ=0.9902;ERATE=0.0003;THETA=0.0038;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 30988360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0004;THETA=0.0076;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30988365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.2243;AVGPOST=0.9820;RSQ=0.9698;ERATE=0.0020;THETA=0.0086;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 30988405 rs71580105 CAGAAGGGTGGACAGGACTTAGCAG C 21928 PASS INDEL;BAVGPOST=0.553;BRSQ=0.340;LDAF=0.4947;AVGPOST=0.6419;RSQ=0.4148;ERATE=0.0521;THETA=0.0159;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 30988467 . G GGAC 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5274;ERATE=0.0005;THETA=0.0226;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30988490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0004;THETA=0.0154;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0181;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30988530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.902;LDAF=0.4755;AVGPOST=0.9463;RSQ=0.9221;ERATE=0.0301;THETA=0.0138;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 30988653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8917;ERATE=0.0005;THETA=0.0105;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30988689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9614;ERATE=0.0003;THETA=0.0090;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30988763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9052;ERATE=0.0004;THETA=0.0085;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30988799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1018;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0003;THETA=0.0056;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 30988841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0457;AVGPOST=0.9981;RSQ=0.9820;ERATE=0.0003;THETA=0.0030;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 30988915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30988943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0005;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30988944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4146;ERATE=0.0004;THETA=0.0178;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7613;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30988974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30988980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0526;AVGPOST=0.9912;RSQ=0.9431;ERATE=0.0004;THETA=0.0043;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 30989028 . T TGTAG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30989049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0111;AVGPOST=0.9966;RSQ=0.8700;ERATE=0.0004;THETA=0.0079;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30989071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9583;ERATE=0.0003;THETA=0.0040;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30989174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7306;ERATE=0.0003;THETA=0.0093;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30989197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0005;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30989364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30989400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8938;ERATE=0.0004;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 30989426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30989429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8028;ERATE=0.0003;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30989434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0195;AVGPOST=0.9985;RSQ=0.9697;ERATE=0.0004;THETA=0.0072;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 30989441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2858;ERATE=0.0004;THETA=0.0016;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 30989461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6771;ERATE=0.0007;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30989488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9218;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30989635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7054;ERATE=0.0003;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30989639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1626;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0004;THETA=0.0010;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 30989719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1632;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 30989746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30989754 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30989808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1500;AVGPOST=0.9944;RSQ=0.9846;ERATE=0.0004;THETA=0.0011;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 30990062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7208;ERATE=0.0010;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30990203 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0578;AVGPOST=0.9973;RSQ=0.9836;ERATE=0.0004;THETA=0.0009;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 30990227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9043;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30990267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.942;LDAF=0.3521;AVGPOST=0.9748;RSQ=0.9572;ERATE=0.0047;THETA=0.0006;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 30990300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0678;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0016;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 30990336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.964;LDAF=0.1628;AVGPOST=0.9936;RSQ=0.9807;ERATE=0.0009;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 30990355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.3781;AVGPOST=0.9959;RSQ=0.9930;ERATE=0.0008;THETA=0.0002;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 30990388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8868;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30990404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8996;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30990486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5148;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30990642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.7648;ERATE=0.0008;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30990684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.536;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4647;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30990700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1630;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 30990710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8360;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30990718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8425;ERATE=0.0016;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30990749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7727;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30990855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3799;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 30990933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30990953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30990964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.7018;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30991055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.3664;AVGPOST=0.9858;RSQ=0.9813;ERATE=0.0005;THETA=0.0002;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 30991065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3673;AVGPOST=0.9859;RSQ=0.9817;ERATE=0.0007;THETA=0.0008;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 30991145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30991167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0052;AVGPOST=0.9955;RSQ=0.6969;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30991203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3803;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 30991476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8842;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 30991495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0003;AVGPOST=0.9998;RSQ=0.7498;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30991741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30991745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30991762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3791;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 30991771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30991783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3207;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0006;THETA=0.0010;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 30991798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2572;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 30991799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0749;AVGPOST=0.9974;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 30991837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30991846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3780;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 30991929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0810;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 30991951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9523;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30991953 . GATA G 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6481;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30992048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30992114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30992175 rs111965812 G GATA 59958 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3777;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0008;THETA=0.0004;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 30992198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0807;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 30992213 . T TGAA 50266 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3729;AVGPOST=0.9923;RSQ=0.9887;ERATE=0.0008;THETA=0.0005;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 30992258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3576;AVGPOST=0.9873;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 30992259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3585;AVGPOST=0.9881;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 30992288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30992318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3787;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0010;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 30992339 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30992346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30992447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3785;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0009;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 30992463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0632;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 30992482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3762;AVGPOST=0.9954;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 30992491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3690;AVGPOST=0.9883;RSQ=0.9838;ERATE=0.0008;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 30992497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3583;AVGPOST=0.9841;RSQ=0.9763;ERATE=0.0032;THETA=0.0003;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 30992598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0029;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 30992656 rs5773303 T TG 49771 PASS INDEL;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3757;AVGPOST=0.9862;RSQ=0.9786;ERATE=0.0065;THETA=0.0005;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 30992716 rs5773304 T TGCCTC 69184 PASS INDEL;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3731;AVGPOST=0.9879;RSQ=0.9816;ERATE=0.0029;THETA=0.0009;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 30992785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3798;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 30992792 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3821;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 30992802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30992846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3794;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 30992871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30992908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8498;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30992950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0087;AVGPOST=0.9975;RSQ=0.8966;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 30992984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9247;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30993005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3789;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 30993140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30993160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2005;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 30993221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30993256 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7412;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30993384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30993433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8497;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30993440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30993489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9770;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30993541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30993563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30993605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 30993612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30993615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3603;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 30993619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30993642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30993690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3793;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 30993722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30993752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30993838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6751;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30993846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.802;LDAF=0.8610;AVGPOST=0.9351;RSQ=0.8088;ERATE=0.0080;THETA=0.0036;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 30993886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7515;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30993928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30993931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1599;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0003;THETA=0.0018;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 30994109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.7097;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30994356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30994433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30994444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30994468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1574;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 30994478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5498;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 30994521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9193;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30994527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30994549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0297;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0039;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 30994559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30994614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0768;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 30994623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7757;ERATE=0.0007;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30994625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9431;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30994646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30994669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9649;ERATE=0.0003;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 30994704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8176;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30994720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30994734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30994746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7656;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30994904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30995045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30995126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8803;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30995130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30995283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0547;AVGPOST=0.9979;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 30995330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30995428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0572;AVGPOST=0.9988;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 30995433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30995523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8195;ERATE=0.0004;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30995535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6854;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30995572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0097;AVGPOST=0.9993;RSQ=0.9670;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 30995613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30995700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30995725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8462;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30995808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 30995822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8921;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30995905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0863;AVGPOST=0.9980;RSQ=0.9895;ERATE=0.0004;THETA=0.0010;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 30995923 . TG T 15924 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0783;AVGPOST=0.9967;RSQ=0.9830;ERATE=0.0006;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 30995933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0004;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30995938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30995988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0155;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0047;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 30996070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9646;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 30996247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0640;AVGPOST=0.9981;RSQ=0.9897;ERATE=0.0003;THETA=0.0012;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 30996527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30996658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0629;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0009;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 30996680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5272;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30996891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 30996940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0745;AVGPOST=0.9955;RSQ=0.9765;ERATE=0.0003;THETA=0.0040;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 30996970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7895;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30996984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0103;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30997009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0137;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30997103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9749;ERATE=0.0004;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 30997247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0171;AVGPOST=0.9957;RSQ=0.8990;ERATE=0.0006;THETA=0.0048;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 30997275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.956;LDAF=0.0637;AVGPOST=0.9855;RSQ=0.9091;ERATE=0.0008;THETA=0.0032;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 30997306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.394;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.5083;ERATE=0.0010;THETA=0.0122;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30997424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.803;BRSQ=0.311;LDAF=0.1985;AVGPOST=0.7884;RSQ=0.4855;ERATE=0.0061;THETA=0.0007;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 30997439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.478;LDAF=0.1650;AVGPOST=0.8369;RSQ=0.5364;ERATE=0.0114;THETA=0.0025;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 30997444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.549;LDAF=0.1961;AVGPOST=0.8471;RSQ=0.6398;ERATE=0.0057;THETA=0.0046;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 30997464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.738;LDAF=0.0889;AVGPOST=0.9473;RSQ=0.7590;ERATE=0.0023;THETA=0.0012;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 30997471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.788;LDAF=0.0785;AVGPOST=0.9705;RSQ=0.8478;ERATE=0.0014;THETA=0.0102;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 30997498 . A AAAG 343 PASS INDEL;BAVGPOST=0.968;BRSQ=0.616;LDAF=0.0515;AVGPOST=0.9673;RSQ=0.7430;ERATE=0.0018;THETA=0.0021;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 30997536 . G GAA 304 PASS INDEL;BAVGPOST=0.985;BRSQ=0.428;LDAF=0.0164;AVGPOST=0.9853;RSQ=0.6425;ERATE=0.0009;THETA=0.0037;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 30997540 . GAA G 2259 PASS INDEL;BAVGPOST=0.861;BRSQ=0.450;LDAF=0.1691;AVGPOST=0.8458;RSQ=0.5493;ERATE=0.0156;THETA=0.0129;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 30997570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.581;LDAF=0.0899;AVGPOST=0.9249;RSQ=0.6259;ERATE=0.0141;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 30997574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.741;LDAF=0.1061;AVGPOST=0.9410;RSQ=0.7602;ERATE=0.0099;THETA=0.0033;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 30997627 . AG A 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30997646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0517;AVGPOST=0.9947;RSQ=0.9618;ERATE=0.0005;THETA=0.0022;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 30997701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.522;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7638;ERATE=0.0005;THETA=0.0078;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30997738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4443;ERATE=0.0006;THETA=0.0126;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30997753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0087;AVGPOST=0.9951;RSQ=0.7731;ERATE=0.0005;THETA=0.0041;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 30997755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3654;ERATE=0.0006;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30997789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.884;LDAF=0.1429;AVGPOST=0.9487;RSQ=0.8452;ERATE=0.0012;THETA=0.0093;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 30997802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.5841;ERATE=0.0006;THETA=0.0146;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30997820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9117;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 30997877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7258;ERATE=0.0017;THETA=0.0127;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 30997926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0480;AVGPOST=0.9972;RSQ=0.9777;ERATE=0.0003;THETA=0.0134;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 30997929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.8973;ERATE=0.0004;THETA=0.0037;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 30997978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.952;LDAF=0.0562;AVGPOST=0.9936;RSQ=0.9578;ERATE=0.0008;THETA=0.0072;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 30997979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4885;ERATE=0.0011;THETA=0.0126;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30998006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7779;ERATE=0.0003;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 30998015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0153;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30998096 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.891;LDAF=0.2072;AVGPOST=0.9650;RSQ=0.9143;ERATE=0.0030;THETA=0.0076;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 30998132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7142;ERATE=0.0004;THETA=0.0199;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30998145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8056;ERATE=0.0003;THETA=0.0161;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30998149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.935;LDAF=0.0471;AVGPOST=0.9947;RSQ=0.9540;ERATE=0.0019;THETA=0.0271;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 30998206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7831;ERATE=0.0005;THETA=0.0361;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30998314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0004;THETA=0.0158;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30998328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9457;ERATE=0.0003;THETA=0.0371;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30998500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9153;ERATE=0.0013;THETA=0.0073;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 30998548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.781;LDAF=0.0320;AVGPOST=0.9801;RSQ=0.7510;ERATE=0.0053;THETA=0.0238;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 30998559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5321;ERATE=0.0003;THETA=0.0371;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30998579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.890;LDAF=0.4476;AVGPOST=0.9290;RSQ=0.9038;ERATE=0.0243;THETA=0.0363;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 30998590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9295;ERATE=0.0004;THETA=0.0205;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 30998783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0004;THETA=0.0184;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30998810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6738;ERATE=0.0004;THETA=0.0089;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30998823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8125;ERATE=0.0003;THETA=0.0133;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30998903 rs10676456 T TGCCAGA 4215 PASS INDEL;BAVGPOST=0.994;BRSQ=0.834;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.8916;ERATE=0.0004;THETA=0.0140;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 30998912 . C CAG 756 PASS INDEL;BAVGPOST=0.994;BRSQ=0.831;LDAF=0.0159;AVGPOST=0.9959;RSQ=0.8983;ERATE=0.0004;THETA=0.0163;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 30999020 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0178;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.924;LDAF=0.0534;AVGPOST=0.9911;RSQ=0.9411;ERATE=0.0004;THETA=0.0275;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 30999075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9754;ERATE=0.0003;THETA=0.0215;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 30999115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7257;ERATE=0.0004;THETA=0.0290;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 30999184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8127;ERATE=0.0005;THETA=0.0059;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 30999210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.9056;AVGPOST=0.9935;RSQ=0.9717;ERATE=0.0003;THETA=0.0031;AC=1978;AN=2184 GT:DS:GL:BD 0.90567768 1
1 30999226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0177;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0495;AVGPOST=0.9961;RSQ=0.9681;ERATE=0.0005;THETA=0.0041;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 30999345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9051;AVGPOST=0.9973;RSQ=0.9877;ERATE=0.0005;THETA=0.0049;AC=1977;AN=2184 GT:DS:GL:BD 0.90521979 1
1 30999381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0731;AVGPOST=0.9975;RSQ=0.9863;ERATE=0.0003;THETA=0.0039;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 30999413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8599;ERATE=0.0004;THETA=0.0049;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 30999593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9603;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0040;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 30999687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9606;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0067;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 30999764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8818;ERATE=0.0003;THETA=0.0034;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 30999766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9987;RSQ=0.9750;ERATE=0.0004;THETA=0.0015;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 30999790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7024;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 30999849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 30999903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0559;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0021;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 30999924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31000023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0425;AVGPOST=0.9963;RSQ=0.9670;ERATE=0.0004;THETA=0.0024;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31000037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31000078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0505;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0003;THETA=0.0029;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 31000191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5640;AVGPOST=0.9883;RSQ=0.9838;ERATE=0.0007;THETA=0.0011;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 31000290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8050;AVGPOST=0.9956;RSQ=0.9899;ERATE=0.0004;THETA=0.0007;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 31000400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8453;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31000418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0564;AVGPOST=0.9984;RSQ=0.9892;ERATE=0.0004;THETA=0.0007;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31000557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31000580 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0261;AVGPOST=0.9990;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31000635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6762;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 31000735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31000783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31000821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1739;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 31000968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31001099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0509;AVGPOST=0.9984;RSQ=0.9857;ERATE=0.0005;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 31001111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3958;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31001140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0560;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31001231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9318;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31001385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31001553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31001686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7299;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31001700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6748;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 31001718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1584;AVGPOST=0.9951;RSQ=0.9880;ERATE=0.0005;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 31001966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31002038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31002057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7296;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31002099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9812;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 31002123 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7559;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31002165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31002286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0481;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31002314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31002335 . T TA 678 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31002427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9811;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0010;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 31002565 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8073;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31002602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0513;AVGPOST=0.9983;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 31002675 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6022;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31002721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.6378;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31002748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4916;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31002809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8302;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31002810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9266;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31002882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.669;LDAF=0.0040;AVGPOST=0.9969;RSQ=0.7154;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31002966 . CATATT C 115 PASS INDEL;BAVGPOST=0.994;BRSQ=0.236;LDAF=0.0135;AVGPOST=0.9894;RSQ=0.6658;ERATE=0.0011;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31002988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.177;LDAF=0.0310;AVGPOST=0.9564;RSQ=0.4537;ERATE=0.0041;THETA=0.0023;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31003020 . A ATAT 978 PASS INDEL;BAVGPOST=0.923;BRSQ=0.510;LDAF=0.0952;AVGPOST=0.9574;RSQ=0.8159;ERATE=0.0021;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 31003021 . T TATA 1415 PASS INDEL;BAVGPOST=0.923;BRSQ=0.514;LDAF=0.0823;AVGPOST=0.9741;RSQ=0.8796;ERATE=0.0007;THETA=0.0009;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 31003027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.812;LDAF=0.0628;AVGPOST=0.9818;RSQ=0.8746;ERATE=0.0016;THETA=0.0012;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 31003042 . CATATAAT C 1495 PASS INDEL;BAVGPOST=0.983;BRSQ=0.825;LDAF=0.0603;AVGPOST=0.9818;RSQ=0.8735;ERATE=0.0014;THETA=0.0007;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31003077 . AAT A 1847 PASS INDEL;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0566;AVGPOST=0.9915;RSQ=0.9455;ERATE=0.0008;THETA=0.0008;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31003081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.391;LDAF=0.0132;AVGPOST=0.9893;RSQ=0.6655;ERATE=0.0009;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31003091 . CATATATT C 128 PASS INDEL;BAVGPOST=0.997;BRSQ=0.485;LDAF=0.0076;AVGPOST=0.9909;RSQ=0.4774;ERATE=0.0013;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31003207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.436;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.5994;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31003352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1249;AVGPOST=0.9928;RSQ=0.9753;ERATE=0.0005;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 31003383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0036;AVGPOST=0.9960;RSQ=0.5384;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31003415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31003452 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9211;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 31003453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5605;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31003519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31003561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0535;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 31003582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31003625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.9048;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31003643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31003718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7807;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31003855 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0559;AVGPOST=0.9993;RSQ=0.9943;ERATE=0.0003;THETA=0.0011;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31004134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0556;AVGPOST=0.9984;RSQ=0.9873;ERATE=0.0004;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31004240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1654;AVGPOST=0.9963;RSQ=0.9889;ERATE=0.0004;THETA=0.0018;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 31004303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8723;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31004321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9286;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31004366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31004375 . CA C 519 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7382;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31004399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31004457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31004598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31004599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31004607 . AT A 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8858;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31004680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0886;AVGPOST=0.9972;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 31004689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4855;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31004742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9983;RSQ=0.9726;ERATE=0.0003;THETA=0.0020;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31004757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8275;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31004768 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31004796 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31004800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1301;AVGPOST=0.9971;RSQ=0.9901;ERATE=0.0005;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 31004885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9610;AVGPOST=0.9973;RSQ=0.9758;ERATE=0.0005;THETA=0.0008;AC=2101;AN=2184 GT:DS:GL:BD 0.96199632 1
1 31004906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0168;AVGPOST=0.9991;RSQ=0.9779;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31004945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9629;AVGPOST=0.9990;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 31005006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31005097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6349;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31005150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4698;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31005227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7768;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31005274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31005359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9798;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 31005459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31005513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31005579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3682;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 31005581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7907;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31005669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2177;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 31005674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31005677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7580;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31005698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7949;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31005713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9799;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 31005728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5970;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31005733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31005777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31005827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9839;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 31005831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.935;LDAF=0.0758;AVGPOST=0.9907;RSQ=0.9525;ERATE=0.0007;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 31005852 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31005869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31005884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31005890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31006103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9633;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 31006110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1670;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 31006247 . T TG 19565 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1667;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 31006276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31006306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31006307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31006372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0548;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31006621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5390;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0006;THETA=0.0004;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 31006657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31006714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3474;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 31006814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0206;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31006871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5110;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31006968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5402;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 31007005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31007022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1025;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 31007037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3476;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 31007066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31007197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0490;AVGPOST=0.9974;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 31007222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6824;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31007291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9495;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31007300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9633;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 31007373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9627;AVGPOST=0.9987;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 31007409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7889;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31007442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8649;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31007472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1155;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 31007532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31007591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7600;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31007607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0049;AVGPOST=0.9977;RSQ=0.8523;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31007671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31007734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31007772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9634;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 31007873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31007890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0525;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 31008040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31008094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0492;AVGPOST=0.9965;RSQ=0.9751;ERATE=0.0004;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 31008123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1737;AVGPOST=0.9957;RSQ=0.9885;ERATE=0.0004;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 31008130 . TCTCC T 27 PASS INDEL;BAVGPOST=0.997;BRSQ=0.574;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5612;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31008154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31008215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5097;AVGPOST=0.9958;RSQ=0.9931;ERATE=0.0005;THETA=0.0003;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 31008363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7020;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31008382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9634;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 31008430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9098;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31008441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31008616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1591;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 31008629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31008668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31008700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0683;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 31008714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0197;AVGPOST=0.9977;RSQ=0.9608;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31008729 . TG T 366 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31008736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31008761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31008763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31009071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31009087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1581;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 31009117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9838;AVGPOST=0.9990;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 31009118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0550;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31009239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3859;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 31009293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6306;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31009384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8189;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31009385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0200;AVGPOST=0.9985;RSQ=0.9750;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31009392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31009394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2277;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 31009476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31009479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31009650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31009659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31009683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31009691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31009761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0183;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31009805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31009908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9993;RSQ=0.9868;ERATE=0.0003;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31010022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31010176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8435;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31010195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0526;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 31010198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5684;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0012;THETA=0.0005;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 31010203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31010275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1650;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 31010290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31010302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3855;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 31010331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31010413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2823;AVGPOST=0.9976;RSQ=0.9945;ERATE=0.0006;THETA=0.0003;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 31010415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9166;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31010792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31011046 . GTCAT G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7211;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31011107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9349;ERATE=0.0004;THETA=0.0053;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31011147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31011165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6050;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0005;THETA=0.0009;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 31011242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31011245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0039;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31011267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9790;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31011283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8612;AVGPOST=0.9965;RSQ=0.9897;ERATE=0.0004;THETA=0.0004;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 31011331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31011439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31011445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31011460 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31011473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31011584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5637;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31011589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7198;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31011600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31011624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31011626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1137;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31011676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0118;AVGPOST=0.9964;RSQ=0.8787;ERATE=0.0004;THETA=0.0021;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31011906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6583;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31011960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0111;AVGPOST=0.9982;RSQ=0.9266;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31011962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5848;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31011967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31011987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3811;AVGPOST=0.9928;RSQ=0.9867;ERATE=0.0017;THETA=0.0029;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 31011998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31012014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.4044;AVGPOST=0.9874;RSQ=0.9806;ERATE=0.0005;THETA=0.0003;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 31012152 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31012257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3350;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 31012481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7425;ERATE=0.0005;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31012518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.2092;AVGPOST=0.9961;RSQ=0.9898;ERATE=0.0006;THETA=0.0058;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 31012751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31012781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31012793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31012888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31012933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31012991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8664;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31013051 . GT G 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4279;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31013131 . G GT 46 PASS INDEL;BAVGPOST=0.985;BRSQ=0.464;LDAF=0.0193;AVGPOST=0.9780;RSQ=0.5409;ERATE=0.0061;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31013182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0138;AVGPOST=0.9980;RSQ=0.9399;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31013255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9743;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31013393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5220;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31013426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9990;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 31013451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31013570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8559;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31013611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31013627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31013628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31013636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9579;ERATE=0.0004;THETA=0.0022;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31013661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31013663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5489;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31013687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0159;AVGPOST=0.9985;RSQ=0.9650;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31013764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31013775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5105;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0005;THETA=0.0007;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 31013815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31013884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31013894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8898;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31013958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9370;AVGPOST=0.9981;RSQ=0.9875;ERATE=0.0005;THETA=0.0021;AC=2048;AN=2184 GT:DS:GL:BD 0.93772894 1
1 31014063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31014133 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31014136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5241;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 31014249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31014254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31014327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31014340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1644;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0009;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 31014421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31014506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6793;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 31014522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31014554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0159;AVGPOST=0.9989;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31014649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31014660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31014731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31014759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8182;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31014760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0485;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31014761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31014874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.900;LDAF=0.0768;AVGPOST=0.9926;RSQ=0.9602;ERATE=0.0003;THETA=0.0002;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 31014939 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7383;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31014982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=0.9990;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31015008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31015122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5692;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 31015161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9023;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31015268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0078;AVGPOST=0.9966;RSQ=0.8273;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31015269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0552;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31015271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31015349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9305;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 31015373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31015397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9783;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31015512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6400;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31015528 . CTGA C 9615 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0551;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31015618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31015727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5783;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 31015877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8555;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31015911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8873;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31015998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31016037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0187;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31016114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31016289 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31016350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0154;AVGPOST=0.9962;RSQ=0.9035;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31016465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31016467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31016532 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1627;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 31016564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2356;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 31016614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31016615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31016661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31016672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31016778 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31016809 . G GA 166 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31016813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31016825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31016945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1572;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 31016948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0227;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31017001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31017002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31017048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9992;RSQ=0.9772;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31017055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31017075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31017152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0550;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31017153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1626;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 31017178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0558;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31017262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7541;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31017273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31017281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31017300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6938;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31017376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5739;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0007;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 31017448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9369;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31017505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0245;AVGPOST=0.9992;RSQ=0.9888;ERATE=0.0004;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 31017541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31017683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 31017702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31017706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31017725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31017736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7037;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31017792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8356;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31017897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31017956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8024;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31018122 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1329;AVGPOST=0.9949;RSQ=0.9815;ERATE=0.0005;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 31018161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31018198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8312;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31018248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9706;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 31018252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0540;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31018283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31018299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5746;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 31018346 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 31018398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0544;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 31018410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31018459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0056;AVGPOST=0.9977;RSQ=0.8159;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31018495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9985;AVGPOST=0.9989;RSQ=0.7320;ERATE=0.0004;THETA=0.0003;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 31018509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8865;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31018688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31018916 . TTTTG T 33 PASS INDEL;BAVGPOST=0.996;BRSQ=0.667;LDAF=0.0102;AVGPOST=0.9907;RSQ=0.6233;ERATE=0.0033;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31018962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31019001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31019002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31019011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31019064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31019187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7906;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31019321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31019504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8173;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31019564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0150;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31019588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31019650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3496;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31019668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1111;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31019794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5814;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 31020107 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31020194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31020235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31020468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31020549 rs67072908 T TC 75708 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5169;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0008;THETA=0.0002;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 31020748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31020767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31020772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31020806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31020986 . AC A 622 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31021053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8626;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31021189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8430;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31021213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0097;AVGPOST=0.9966;RSQ=0.8795;ERATE=0.0008;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31021276 . TTAA T 53 PASS INDEL;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0054;AVGPOST=0.9943;RSQ=0.5251;ERATE=0.0010;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31021287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0536;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 31021291 . AT A 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.2845;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31021370 . TTAA T 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0053;AVGPOST=0.9946;RSQ=0.6057;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31021384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0324;AVGPOST=0.9976;RSQ=0.9656;ERATE=0.0006;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31021410 rs71682711 TTTA T 4720 PASS INDEL;BAVGPOST=0.991;BRSQ=0.917;LDAF=0.0623;AVGPOST=0.9891;RSQ=0.9377;ERATE=0.0011;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31021658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7712;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31021678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1726;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 31021685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1112;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31021701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6992;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31021773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7413;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31021813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3654;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31021870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0551;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31021911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31021941 . AT A 5399 PASS INDEL;BAVGPOST=0.964;BRSQ=0.920;LDAF=0.2720;AVGPOST=0.9804;RSQ=0.9625;ERATE=0.0026;THETA=0.0002;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 31021942 rs68144884 TA T 34435 PASS INDEL;BAVGPOST=0.714;BRSQ=0.546;LDAF=0.6154;AVGPOST=0.7242;RSQ=0.5820;ERATE=0.0502;THETA=0.0007;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 31022056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5801;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 31022170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5804;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 31022237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5016;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 31022302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31022482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1847;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 31022488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31022501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31022580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.9351;AVGPOST=0.9965;RSQ=0.9796;ERATE=0.0009;THETA=0.0006;AC=2043;AN=2184 GT:DS:GL:BD 0.93543959 1
1 31022636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31022700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31022714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7590;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 31022792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31022832 . AT A 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5853;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31022931 . A ATC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6894;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31023017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31023022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9400;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31023053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31023291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7815;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 31023303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7818;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 31023412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0111;AVGPOST=0.9969;RSQ=0.8973;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31023427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.663;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8301;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31023478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.7140;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31023493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8410;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31023529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5865;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31023600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7380;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31023685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0952;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31023690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31023706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9138;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31023734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1568;AVGPOST=0.9964;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 31023736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31023741 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8777;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31023813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0137;AVGPOST=0.9988;RSQ=0.9684;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31023814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8333;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31023843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4012;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31023909 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1815;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31023952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31023954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6620;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31024138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.644;LDAF=0.0056;AVGPOST=0.9968;RSQ=0.7948;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31024144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1816;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0005;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31024273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7264;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31024342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1432;AVGPOST=0.9975;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 31024399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.9394;AVGPOST=0.9969;RSQ=0.9792;ERATE=0.0007;THETA=0.0008;AC=2054;AN=2184 GT:DS:GL:BD 0.94047618 1
1 31024454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31024478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31024501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7183;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31024502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1052;AVGPOST=0.9983;RSQ=0.9931;ERATE=0.0007;THETA=0.0004;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31024521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1762;AVGPOST=0.9957;RSQ=0.9912;ERATE=0.0008;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 31024522 . AAGAAG A 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31024533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0163;AVGPOST=0.9980;RSQ=0.9529;ERATE=0.0006;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31024575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9983;RSQ=0.9877;ERATE=0.0003;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 31024601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9205;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31024623 . CA C 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6825;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31024641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31024662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5258;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31024670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5124;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31024756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1824;AVGPOST=0.9973;RSQ=0.9929;ERATE=0.0008;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31024758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1814;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31024772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1853;AVGPOST=0.9940;RSQ=0.9874;ERATE=0.0009;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 31024788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31024804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1812;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31024967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0902;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 31025002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1817;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31025067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31025109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31025129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31025255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1816;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31025270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31025300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1813;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31025391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1861;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 31025396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31025518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31025567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31025580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31025680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8762;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31025775 . GCT G 269 PASS INDEL;BAVGPOST=0.987;BRSQ=0.690;LDAF=0.0357;AVGPOST=0.9650;RSQ=0.5773;ERATE=0.0146;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31025779 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3439;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 31025875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1826;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31026018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9853;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31026055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0044;AVGPOST=0.9966;RSQ=0.7044;ERATE=0.0018;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31026056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31026087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31026189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8008;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31026190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31026226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31026353 . CT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31026402 rs59475634 A AG 28130 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1822;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31026544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0550;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31026558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1818;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31026642 . GA G 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31026649 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1949;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31026770 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31026795 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0114;AVGPOST=0.9979;RSQ=0.9280;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31026801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9571;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31026896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1821;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31026949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8776;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31026959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31027063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6431;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31027070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8497;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31027130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1820;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31027142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31027213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31027266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1824;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31027360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31027393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9988;RSQ=0.9772;ERATE=0.0004;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31027486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31027543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31027560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1820;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31027579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31027583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31027724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1824;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31027853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0134;AVGPOST=0.9972;RSQ=0.9203;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31027878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31027917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1826;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31028001 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0551;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31028135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1821;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31028207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7561;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31028253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0983;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 31028258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7782;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31028283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1819;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31028289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0005;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31028309 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31028315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31028513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31028517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1818;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31028520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1818;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 31028531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8232;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31028604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31028622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31028685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31028718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1274;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 31028740 . G GT 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5424;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31028778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31028846 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1110;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31028973 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5736;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 31028980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9408;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=2055;AN=2184 GT:DS:GL:BD 0.94093406 1
1 31029026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9408;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=2055;AN=2184 GT:DS:GL:BD 0.94093406 1
1 31029106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8255;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31029182 . CA C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31029307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7489;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 31029346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6592;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31029357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8142;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31029376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3289;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 31029455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7096;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029480 . AAGGTAAAC A 471 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31029545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029598 . T TG 45695 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8789;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 31029655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31029711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4908;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3367;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31029713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2834;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 31029769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9105;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31029886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0053;AVGPOST=0.9980;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31029896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0081;AVGPOST=0.9975;RSQ=0.8802;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31029908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6611;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31029927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0077;AVGPOST=0.9982;RSQ=0.9014;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31029972 rs58871496 A AAG 14159 PASS INDEL;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0978;AVGPOST=0.9945;RSQ=0.9793;ERATE=0.0010;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 31030042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31030092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0558;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 31030186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31030205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31030362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31030493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.9625;AVGPOST=0.9917;RSQ=0.9122;ERATE=0.0009;THETA=0.0004;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 31030553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6401;AVGPOST=0.9953;RSQ=0.9909;ERATE=0.0007;THETA=0.0002;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 31030554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.9871;AVGPOST=0.9926;RSQ=0.7656;ERATE=0.0011;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 31030598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1122;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0010;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31031063 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31031206 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31031214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8061;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31031307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7915;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31031347 . AAAAC A 852 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31031350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31031408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0537;AVGPOST=0.9981;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31031495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1100;AVGPOST=0.9983;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31031545 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1108;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0004;THETA=0.0007;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31031687 . A AC 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31031794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1104;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0005;THETA=0.0001;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31031804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1135;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31031876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31031893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1425;AVGPOST=0.9976;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 31031962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9974;RSQ=0.9612;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31031995 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9718;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31032047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31032051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6728;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31032066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6474;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31032081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1125;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31032134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31032209 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1135;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31032211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31032320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31032335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8830;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31032445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1134;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31032565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0075;AVGPOST=0.9984;RSQ=0.9233;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31032605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31032686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9992;RSQ=0.9740;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31032749 rs78059806 CAGA C 71884 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5146;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0006;THETA=0.0004;AC=1124;AN=2184 GT:DS:GL:BD 0.51465201 1
1 31032785 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9371;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31032890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31033075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7398;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31033097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31033238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7854;AVGPOST=0.9983;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 31033299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31033468 rs75515612 AT A 165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7907;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31033532 . AT A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7110;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31033741 rs35128883 G GA 7401 PASS INDEL;BAVGPOST=0.980;BRSQ=0.914;LDAF=0.1373;AVGPOST=0.9604;RSQ=0.8715;ERATE=0.0072;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 31033774 . TAAGA T 147 PASS INDEL;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0035;AVGPOST=0.9955;RSQ=0.4825;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31033778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31033812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.920;LDAF=0.1012;AVGPOST=0.9882;RSQ=0.9522;ERATE=0.0005;THETA=0.0004;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 31033820 . T TA 6956 PASS INDEL;BAVGPOST=0.985;BRSQ=0.913;LDAF=0.1017;AVGPOST=0.9864;RSQ=0.9487;ERATE=0.0005;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 31033823 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.915;LDAF=0.1004;AVGPOST=0.9883;RSQ=0.9545;ERATE=0.0005;THETA=0.0008;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 31033825 . AT A 5415 PASS INDEL;BAVGPOST=0.985;BRSQ=0.913;LDAF=0.1009;AVGPOST=0.9867;RSQ=0.9480;ERATE=0.0005;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 31033832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.927;LDAF=0.0500;AVGPOST=0.9926;RSQ=0.9455;ERATE=0.0005;THETA=0.0012;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 31033835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.921;LDAF=0.0998;AVGPOST=0.9874;RSQ=0.9497;ERATE=0.0005;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 31033845 . AC A 1493 PASS INDEL;BAVGPOST=0.989;BRSQ=0.943;LDAF=0.1024;AVGPOST=0.9888;RSQ=0.9571;ERATE=0.0004;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 31033851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.965;LDAF=0.1081;AVGPOST=0.9902;RSQ=0.9650;ERATE=0.0005;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 31033881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31034003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31034039 . CT C 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31034051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31034077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31034125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31034129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9984;RSQ=0.9767;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31034236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5740;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31034360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31034364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7746;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31034441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8165;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31034476 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31034483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31034489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1103;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31034527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034540 . G GA 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8321;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31034663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5400;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0006;THETA=0.0006;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 31034678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7036;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31034737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4889;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034770 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8297;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31034782 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5697;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31034859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7856;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 31034888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1142;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 31034954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9414;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31035013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8955;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31035045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5086;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31035049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31035108 . T TA 1606 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31035129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31035244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1137;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0012;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31035274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31035369 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31035380 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9663;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31035498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6594;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=1439;AN=2184 GT:DS:GL:BD 0.65888280 1
1 31035525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1110;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31035707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5438;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31035805 . AG A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31035877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7625;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31035982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8064;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31036008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31036053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.5131;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31036068 . G GA 317 PASS INDEL;BAVGPOST=0.995;BRSQ=0.740;LDAF=0.0097;AVGPOST=0.9937;RSQ=0.7551;ERATE=0.0009;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31036118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31036159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31036227 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31036354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9464;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31036528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1138;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31036602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1135;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31036620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31036695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31036767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8327;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31036815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7457;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31036834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7384;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31036843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31036896 . TGTGC T 38116 PASS INDEL;BAVGPOST=0.945;BRSQ=0.524;LDAF=0.9085;AVGPOST=0.9028;RSQ=0.5304;ERATE=0.0146;THETA=0.0003;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 31036919 rs112436479 CTTGCTCTG C 70374 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9687;AVGPOST=0.9963;RSQ=0.9501;ERATE=0.0007;THETA=0.0016;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 31036952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8693;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31037038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31037051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1329;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31037077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0111;AVGPOST=0.9990;RSQ=0.9599;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31037176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1635;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 31037253 . A AT 1662 PASS INDEL;BAVGPOST=0.624;BRSQ=0.387;LDAF=0.4241;AVGPOST=0.6800;RSQ=0.4896;ERATE=0.0557;THETA=0.0004;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 31037257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7835;AVGPOST=0.9961;RSQ=0.9902;ERATE=0.0005;THETA=0.0013;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 31037265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7962;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31037476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1146;AVGPOST=0.9967;RSQ=0.9863;ERATE=0.0009;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31037477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9092;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31037723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1104;AVGPOST=0.9979;RSQ=0.9907;ERATE=0.0007;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31037724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0069;AVGPOST=0.9963;RSQ=0.7552;ERATE=0.0014;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31037886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6407;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31037986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8053;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31038029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0062;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31038236 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31038328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9500;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31038404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0568;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0004;THETA=0.0011;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31038441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0088;AVGPOST=0.9983;RSQ=0.9175;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31038491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9811;ERATE=0.0004;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31038571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9564;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31038732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0548;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31038742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31038747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1305;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31038779 . ATT A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6885;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31038812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31038813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1114;AVGPOST=0.9972;RSQ=0.9907;ERATE=0.0004;THETA=0.0008;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 31038917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31039349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0113;AVGPOST=0.9973;RSQ=0.9145;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31039411 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31039544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0569;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31039616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4853;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31039861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0067;AVGPOST=0.9952;RSQ=0.7083;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31039873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4454;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31040023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6895;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31040045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8698;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31040066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31040157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31040273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31040327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31040408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1303;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0007;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31040434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31040554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31040596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31040644 rs79805652 T TA 49938 PASS INDEL;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5262;AVGPOST=0.9883;RSQ=0.9817;ERATE=0.0022;THETA=0.0006;AC=1147;AN=2184 GT:DS:GL:BD 0.52518314 1
1 31040738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0169;AVGPOST=0.9878;RSQ=0.7159;ERATE=0.0011;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31041523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.831;LDAF=0.1859;AVGPOST=0.9649;RSQ=0.9018;ERATE=0.0021;THETA=0.0005;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 31041651 . AAT A 1714 PASS INDEL;BAVGPOST=0.648;BRSQ=0.319;LDAF=0.2987;AVGPOST=0.7069;RSQ=0.4435;ERATE=0.0220;THETA=0.0009;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 31041661 . A AG 1648 PASS INDEL;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0625;AVGPOST=0.9902;RSQ=0.9439;ERATE=0.0008;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 31041722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1307;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0008;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31041724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1131;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 31041806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5206;AVGPOST=0.9971;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 31041837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1315;AVGPOST=0.9982;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 31041916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1306;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31041973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1312;AVGPOST=0.9980;RSQ=0.9941;ERATE=0.0004;THETA=0.0017;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31041984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8046;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31042136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31042200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31042204 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1311;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 31042250 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31042277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31042511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5802;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31042542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31042578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7892;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0004;THETA=0.0011;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 31042635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1298;AVGPOST=0.9975;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31042640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1292;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 31042643 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1293;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 31042708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31042714 . CTT C 343 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31042756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31042798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9106;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31042877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0113;AVGPOST=0.9985;RSQ=0.9427;ERATE=0.0007;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31042911 rs71814369 CAGGATGGGGAA C 12176 PASS INDEL;BAVGPOST=0.984;BRSQ=0.939;LDAF=0.1306;AVGPOST=0.9925;RSQ=0.9761;ERATE=0.0005;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 31042955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1310;AVGPOST=0.9981;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31042956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7316;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31042977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31043041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1301;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1301;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1301;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9476;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31043096 . T TGGC 9920 PASS INDEL;BAVGPOST=0.994;BRSQ=0.942;LDAF=0.0577;AVGPOST=0.9967;RSQ=0.9769;ERATE=0.0006;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31043142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9610;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31043168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8379;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31043175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31043210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1304;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043322 . GA G 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7651;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31043344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31043373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31043460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5220;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7477;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31043498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1303;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31043625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1305;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31043637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043662 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8564;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31043713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31043740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31043743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8340;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31043891 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31043951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31044054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1130;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 31044062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31044097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5221;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 31044098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0578;AVGPOST=0.9987;RSQ=0.9899;ERATE=0.0004;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 31044182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31044240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31044282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31044284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31044329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5661;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31044356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31044392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31044446 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31044613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8850;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31044643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5954;AVGPOST=0.9958;RSQ=0.9936;ERATE=0.0010;THETA=0.0010;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 31044737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31044768 . C CA 342 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31044990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7675;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31045037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9603;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31045085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8870;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31045223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31045410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7050;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31045501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.4185;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31045509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7873;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 31045517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.8990;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31045585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31045596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0027;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31045822 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0580;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31045848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31045885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31046289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31046439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6212;ERATE=0.0004;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31046442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0029;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31046444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0075;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31046559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31046621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9192;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31046917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31047015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7597;ERATE=0.0003;THETA=0.0078;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31047205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.0534;AVGPOST=0.9979;RSQ=0.9850;ERATE=0.0004;THETA=0.0060;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 31047330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31047362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4228;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0007;THETA=0.0005;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 31047462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31047511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31047670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31047682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31047749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31047795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9594;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 31047895 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7582;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31048060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9147;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31048073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7230;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31048077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31048162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.8112;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31048163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6953;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31048397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8186;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31048434 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0270;AVGPOST=0.9984;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31048458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8981;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31048487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31048544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5712;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3108;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 31048605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3739;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 31048758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7823;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 31048886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6501;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 31048894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6492;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0013;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 31048969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31048990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1341;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31049054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31049181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31049215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31049277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31049278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8814;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31049307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9756;ERATE=0.0004;THETA=0.0016;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31049466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 31049518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8444;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31049588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8601;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31049591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7148;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31049600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 31049688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.883;LDAF=0.0283;AVGPOST=0.9961;RSQ=0.9441;ERATE=0.0004;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31049741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31049746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3586;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 31049808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8615;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31049821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7455;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 31049826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1588;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 31049835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0063;AVGPOST=0.9975;RSQ=0.8485;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31049836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5002;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31049848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4170;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 31049969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31050470 . TC T 273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31050491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31050526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0581;AVGPOST=0.9979;RSQ=0.9869;ERATE=0.0004;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 31050613 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.693;LDAF=0.8754;AVGPOST=0.8844;RSQ=0.6099;ERATE=0.0180;THETA=0.0003;AC=1980;AN=2184 GT:DS:GL:BD 0.90659338 1
1 31050804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0608;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31050840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6759;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31050841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.7921;AVGPOST=0.9917;RSQ=0.9782;ERATE=0.0016;THETA=0.0003;AC=1736;AN=2184 GT:DS:GL:BD 0.79487181 1
1 31050995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0110;AVGPOST=0.9968;RSQ=0.8954;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31050998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4916;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31051050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0180;AVGPOST=0.9951;RSQ=0.8883;ERATE=0.0007;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31052184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.902;LDAF=0.1323;AVGPOST=0.9759;RSQ=0.9218;ERATE=0.0013;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 31052336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3606;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0007;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 31052364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31052462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7778;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31052481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4927;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31052601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31052680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9505;ERATE=0.0004;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31052687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0577;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 31053032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8940;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31053044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8856;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31053071 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6716;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31053082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1398;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 31053106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7124;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31053270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31053447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31053533 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31053579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0132;AVGPOST=0.9942;RSQ=0.8232;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31053689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.941;LDAF=0.7838;AVGPOST=0.9732;RSQ=0.9419;ERATE=0.0048;THETA=0.0003;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 31053797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.650;LDAF=0.0078;AVGPOST=0.9947;RSQ=0.7410;ERATE=0.0019;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31053879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3292;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054011 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3045;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 31054077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9981;RSQ=0.9489;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31054079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31054143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3581;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 31054180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0573;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 31054333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1149;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31054347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4205;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1150;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31054417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7581;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31054475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31054493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1588;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0004;THETA=0.0008;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 31054510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1567;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 31054537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9992;RSQ=0.9280;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31054566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6500;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31054577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31054595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7998;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31054628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.9721;AVGPOST=0.9970;RSQ=0.9551;ERATE=0.0006;THETA=0.0003;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 31054833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.1090;AVGPOST=0.9949;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31054846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7952;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31054892 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8938;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31054894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8418;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31054895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1147;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31054935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31054936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0555;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31054945 . TG T 4566 PASS INDEL;BAVGPOST=0.935;BRSQ=0.802;LDAF=0.1848;AVGPOST=0.9091;RSQ=0.7787;ERATE=0.0192;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 31055011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.790;LDAF=0.8942;AVGPOST=0.9263;RSQ=0.7028;ERATE=0.0178;THETA=0.0007;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 31055038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5159;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31055156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9602;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31055346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9505;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31055366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6757;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31055443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31055659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31055718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31055764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0159;AVGPOST=0.9974;RSQ=0.9381;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31055765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.881;BRSQ=0.764;LDAF=0.6646;AVGPOST=0.8300;RSQ=0.7221;ERATE=0.0280;THETA=0.0004;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 31055818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.860;LDAF=0.0545;AVGPOST=0.9943;RSQ=0.9627;ERATE=0.0005;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 31055915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31055955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0061;AVGPOST=0.9926;RSQ=0.4894;ERATE=0.0015;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31055961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.804;LDAF=0.1069;AVGPOST=0.9777;RSQ=0.9136;ERATE=0.0026;THETA=0.0007;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 31056008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1564;AVGPOST=0.9969;RSQ=0.9897;ERATE=0.0007;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 31056013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0072;AVGPOST=0.9981;RSQ=0.9051;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31056061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7536;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31056079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1133;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 31056140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8982;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31056149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31056166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.946;LDAF=0.9557;AVGPOST=0.9932;RSQ=0.9382;ERATE=0.0017;THETA=0.0003;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 31056196 . CT C 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31056260 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6511;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31056269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3986;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31056343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31056365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6374;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31056373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31056374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0556;AVGPOST=0.9957;RSQ=0.9743;ERATE=0.0004;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31056451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.960;LDAF=0.1634;AVGPOST=0.9947;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 31056472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.790;LDAF=0.9263;AVGPOST=0.9593;RSQ=0.7817;ERATE=0.0039;THETA=0.0005;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 31056474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.1139;AVGPOST=0.9971;RSQ=0.9882;ERATE=0.0006;THETA=0.0008;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 31056495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.960;LDAF=0.1104;AVGPOST=0.9898;RSQ=0.9605;ERATE=0.0005;THETA=0.0004;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 31056528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1149;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31056608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31056615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0043;AVGPOST=0.9953;RSQ=0.5531;ERATE=0.0012;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31056654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31056655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.944;LDAF=0.1095;AVGPOST=0.9938;RSQ=0.9801;ERATE=0.0003;THETA=0.0002;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 31056726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.1118;AVGPOST=0.9968;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 31056826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31056863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1154;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 31056895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31056951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31057027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1778;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 31057061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1589;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 31057081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1147;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31057096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8919;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31057201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.892;LDAF=0.1160;AVGPOST=0.9883;RSQ=0.9597;ERATE=0.0009;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 31057308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1588;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 31057315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1164;AVGPOST=0.9973;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 31057389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31057453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4521;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31057495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1147;AVGPOST=0.9973;RSQ=0.9904;ERATE=0.0004;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 31057567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1144;AVGPOST=0.9982;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 31057574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31057575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4483;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31057604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9542;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31057706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0110;AVGPOST=0.9980;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31057708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1064;AVGPOST=0.9956;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 31057709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0613;AVGPOST=0.9963;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 31057709 . A AG 3042 PASS INDEL;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0517;AVGPOST=0.9924;RSQ=0.9533;ERATE=0.0009;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 31057788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31057842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0090;AVGPOST=0.9979;RSQ=0.8969;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31057853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1776;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 31057920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1576;AVGPOST=0.9964;RSQ=0.9885;ERATE=0.0009;THETA=0.0002;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 31057923 . CT C 494 PASS INDEL;BAVGPOST=0.947;BRSQ=0.570;LDAF=0.0790;AVGPOST=0.9472;RSQ=0.7510;ERATE=0.0054;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 31057944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0045;AVGPOST=0.9949;RSQ=0.5700;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31057987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1148;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 31058143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.943;LDAF=0.1057;AVGPOST=0.9895;RSQ=0.9652;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 31058144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.943;LDAF=0.1048;AVGPOST=0.9912;RSQ=0.9698;ERATE=0.0005;THETA=0.0002;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 31058189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0257;AVGPOST=0.9996;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31058302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5046;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0007;THETA=0.0004;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 31058397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5060;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31058398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8733;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31058475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1220;AVGPOST=0.9950;RSQ=0.9824;ERATE=0.0005;THETA=0.0007;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 31058499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.925;LDAF=0.0710;AVGPOST=0.9956;RSQ=0.9765;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 31058536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9246;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31058537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.876;LDAF=0.1483;AVGPOST=0.9676;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 31058543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.949;LDAF=0.4692;AVGPOST=0.9713;RSQ=0.9608;ERATE=0.0007;THETA=0.0004;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 31058547 . GGA G 4978 PASS INDEL;BAVGPOST=0.974;BRSQ=0.872;LDAF=0.1037;AVGPOST=0.9646;RSQ=0.8709;ERATE=0.0005;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 31058552 . GC G 1894 PASS INDEL;BAVGPOST=0.975;BRSQ=0.873;LDAF=0.1020;AVGPOST=0.9676;RSQ=0.8797;ERATE=0.0003;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 31058553 . C CT 7289 PASS INDEL;BAVGPOST=0.974;BRSQ=0.873;LDAF=0.1144;AVGPOST=0.9641;RSQ=0.8743;ERATE=0.0024;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31058785 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1778;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0020;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 31058793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9575;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31058821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1781;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 31058845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31058914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1579;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 31058934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6338;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31058963 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31058990 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8876;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31058996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1348;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 31059025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0421;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 31059083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31059158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1769;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 31059220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31059416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31059510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31059546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1572;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 31059571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0582;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0004;THETA=0.0001;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31059584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31059595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31059605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.966;LDAF=0.2669;AVGPOST=0.9851;RSQ=0.9746;ERATE=0.0004;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 31059747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31059759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31059794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8192;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31059824 . C CT 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4808;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31059864 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3253;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31059931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9427;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31059969 . TC T 1809 PASS INDEL;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0241;AVGPOST=0.9983;RSQ=0.9705;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31059975 . T TC 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0081;AVGPOST=0.9935;RSQ=0.6854;ERATE=0.0008;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31059981 rs5773307 A AC 34201 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2655;AVGPOST=0.9882;RSQ=0.9793;ERATE=0.0029;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 31060050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31060094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8200;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31060136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3250;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31060260 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3916;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31060334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3250;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31060364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3256;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31060398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2845;AVGPOST=0.9957;RSQ=0.9922;ERATE=0.0008;THETA=0.0003;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 31060480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4911;AVGPOST=0.9904;RSQ=0.9845;ERATE=0.0015;THETA=0.0002;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 31060643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31060657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4932;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31060757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31060762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31060780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31060794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6896;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31060824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0303;AVGPOST=0.9983;RSQ=0.9791;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31060950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31060963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7973;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31060981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31060982 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31060996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9088;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31061042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0604;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 31061085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31061152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0541;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 31061185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31061249 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31061271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31061274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31061327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3255;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0006;THETA=0.0002;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31061424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3248;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0006;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31061501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.6383;AVGPOST=0.9896;RSQ=0.9834;ERATE=0.0013;THETA=0.0015;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 31061611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8403;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31061719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3248;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31061740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31061765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0108;AVGPOST=0.9955;RSQ=0.8462;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31061773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3295;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0012;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 31061778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.6359;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31061832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31061925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31061973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3253;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 31061998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2577;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0014;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 31062119 . GC G 1030 PASS INDEL;BAVGPOST=0.995;BRSQ=0.853;LDAF=0.0152;AVGPOST=0.9950;RSQ=0.8687;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31062148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7170;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31062202 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31062229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4598;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0022;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 31062283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6156;ERATE=0.0005;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31062295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4603;AVGPOST=0.9984;RSQ=0.9979;ERATE=0.0004;THETA=0.0066;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 31062384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31062430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31062474 . CTAAA C 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31062535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31062580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3316;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0003;THETA=0.0035;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 31062584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2400;AVGPOST=0.9929;RSQ=0.9877;ERATE=0.0016;THETA=0.0006;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31062654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9990;RSQ=0.9813;ERATE=0.0003;THETA=0.0024;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31062695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8787;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31062726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7674;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31062764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9577;ERATE=0.0003;THETA=0.0126;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31062790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5056;AVGPOST=0.9900;RSQ=0.9870;ERATE=0.0018;THETA=0.0055;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 31062858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31062903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0469;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0003;THETA=0.0122;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31063005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31063171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0067;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31063203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9513;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31063249 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0579;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0051;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 31063254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0121;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31063285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5316;AVGPOST=0.9959;RSQ=0.9941;ERATE=0.0004;THETA=0.0053;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 31063349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31063390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1447;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 31063403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2753;AVGPOST=0.9959;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 31063480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8993;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31063493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7296;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31063508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31063528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1245;AVGPOST=0.9986;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 31063690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31063778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9619;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31063818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1449;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 31063855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5631;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31063900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0739;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 31064058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8852;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31064071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5407;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5410;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5404;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0007;THETA=0.0004;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0766;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 31064203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5405;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0004;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8329;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=1820;AN=2184 GT:DS:GL:BD 0.83333331 1
1 31064278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31064279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0387;AVGPOST=0.9989;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 31064360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5405;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5410;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 31064395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5413;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 31064459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1249;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 31064461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31064527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5404;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5405;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31064569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.5407;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31064587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2550;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0004;THETA=0.0001;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 31064658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0004;THETA=0.0001;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 31064683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31064719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0226;AVGPOST=0.9980;RSQ=0.9624;ERATE=0.0005;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31064726 . G GA 146 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4425;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31064752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5264;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 31064885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0273;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31064896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31064919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8969;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31064930 . AG A 10327 PASS INDEL;BAVGPOST=0.918;BRSQ=0.880;LDAF=0.4813;AVGPOST=0.9108;RSQ=0.8891;ERATE=0.0111;THETA=0.0001;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 31064931 rs34420418 GA G 69735 PASS INDEL;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5394;AVGPOST=0.9960;RSQ=0.9936;ERATE=0.0005;THETA=0.0007;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 31064934 . AT A 9055 PASS INDEL;BAVGPOST=0.914;BRSQ=0.873;LDAF=0.4699;AVGPOST=0.9021;RSQ=0.8747;ERATE=0.0125;THETA=0.0002;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 31064994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1344;AVGPOST=0.9982;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 31065054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5404;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0006;THETA=0.0008;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 31065088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31065139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3954;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 31065226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3953;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 31065432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065437 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5405;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0008;THETA=0.0003;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31065530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31065562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7085;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31065786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31065850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5407;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 31065974 . CAAAG C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31066055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4695;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31066058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0398;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31066070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0561;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31066171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5415;AVGPOST=0.9919;RSQ=0.9882;ERATE=0.0017;THETA=0.0005;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 31066305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31066312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0286;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0005;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 31066348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3747;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0007;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 31066402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7915;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31066438 rs3075386 C CA 11233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 31066446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6734;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31066494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7342;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 31066555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1254;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 31066567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3751;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0007;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 31066611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9029;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31066622 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31066632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31066636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31066791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6073;ERATE=0.0009;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31066805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0005;THETA=0.0014;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31066833 . AAT A 9652 PASS INDEL;BAVGPOST=0.899;BRSQ=0.813;LDAF=0.3794;AVGPOST=0.8688;RSQ=0.7973;ERATE=0.0205;THETA=0.0007;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 31066834 rs36023039 AT A 30328 PASS INDEL;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.4591;AVGPOST=0.9818;RSQ=0.9749;ERATE=0.0006;THETA=0.0005;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 31066927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0642;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 31067022 rs112626304 GGGAAGGAAGAAAAGAAAGAA G 9353 PASS INDEL;BAVGPOST=0.986;BRSQ=0.874;LDAF=0.0551;AVGPOST=0.9964;RSQ=0.9745;ERATE=0.0005;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 31067057 . A AC 94 PASS INDEL;BAVGPOST=0.996;BRSQ=0.574;LDAF=0.0080;AVGPOST=0.9915;RSQ=0.5875;ERATE=0.0018;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31067074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0201;AVGPOST=0.9982;RSQ=0.9727;ERATE=0.0003;THETA=0.0017;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31067137 . G GA 1629 PASS INDEL;BAVGPOST=0.952;BRSQ=0.686;LDAF=0.0880;AVGPOST=0.9722;RSQ=0.8854;ERATE=0.0008;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 31067154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.601;LDAF=0.0872;AVGPOST=0.9173;RSQ=0.6120;ERATE=0.0107;THETA=0.0043;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 31067159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.605;LDAF=0.0539;AVGPOST=0.9678;RSQ=0.7908;ERATE=0.0006;THETA=0.0019;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 31067169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.517;LDAF=0.0587;AVGPOST=0.9459;RSQ=0.6457;ERATE=0.0053;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 31067182 . AGAAG A 57 PASS INDEL;BAVGPOST=0.995;BRSQ=0.356;LDAF=0.0153;AVGPOST=0.9816;RSQ=0.5248;ERATE=0.0012;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31067196 . AAGGGAAGGGAGGG A 24006 PASS INDEL;BAVGPOST=0.924;BRSQ=0.862;LDAF=0.3825;AVGPOST=0.8733;RSQ=0.7977;ERATE=0.0202;THETA=0.0022;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 31067228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.4253;AVGPOST=0.9617;RSQ=0.9421;ERATE=0.0077;THETA=0.0038;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 31067308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.8583;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 31067316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4535;AVGPOST=0.9941;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 31067327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5301;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31067333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8790;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31067427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31067484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31067658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31067753 . AC A 511 PASS INDEL;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7236;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31067784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31067794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31067856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31067910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6892;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31067930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31067949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31067962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9779;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31068008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31068091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31068099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31068173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0727;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 31068252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8659;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=1891;AN=2184 GT:DS:GL:BD 0.86584246 1
1 31068337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31068506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31068642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8869;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31068668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31068986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3217;AVGPOST=0.9972;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 31069049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8237;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31069194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3626;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 31069218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9305;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31069253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6698;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31069418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069454 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31069702 . TGA T 834 PASS INDEL;BAVGPOST=0.977;BRSQ=0.880;LDAF=0.0759;AVGPOST=0.9922;RSQ=0.9603;ERATE=0.0006;THETA=0.0019;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 31069705 rs56895715 GAGA G 18028 PASS INDEL;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0860;AVGPOST=0.9963;RSQ=0.9849;ERATE=0.0004;THETA=0.0032;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 31069766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4249;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0013;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 31069768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31069899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0189;AVGPOST=0.9981;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31069935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9225;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31069975 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9455;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31070015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31070065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3611;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 31070154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0234;AVGPOST=0.9991;RSQ=0.9840;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31070175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2222;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 31070186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0806;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 31070205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31070231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31070301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8402;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 31070315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2835;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 31070339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1130;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 31070340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3373;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0056;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 31070465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1122;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31070524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0527;AVGPOST=0.9968;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 31070536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31070552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31070635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3957;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0009;THETA=0.0011;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 31070708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1107;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 31070713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9231;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31070733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31070779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8643;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0003;THETA=0.0008;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 31070786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0604;AVGPOST=0.9964;RSQ=0.9792;ERATE=0.0007;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 31070793 . GC G 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8438;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31070859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3832;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0007;THETA=0.0005;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 31070862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8765;AVGPOST=0.9964;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=1916;AN=2184 GT:DS:GL:BD 0.87728935 1
1 31070970 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7328;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31071054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3859;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 31071133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31071209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2901;AVGPOST=0.9964;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 31071253 rs75955599 G GC 45979 PASS INDEL;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5033;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0007;THETA=0.0004;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 31071340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31071412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.9965;AVGPOST=0.9980;RSQ=0.8025;ERATE=0.0003;THETA=0.0003;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 31071417 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5118;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31071431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9452;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31071436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4511;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 31071444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4513;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 31071509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3854;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 31071744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3929;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0011;THETA=0.0006;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 31071787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8366;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 31071864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3856;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 31071877 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3858;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 31071884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31071907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31071959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3855;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 31071968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8646;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31072065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31072084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31072289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31072367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9379;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31072397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0931;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 31072510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3087;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0007;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 31072532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31072656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072740 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8074;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31072834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2900;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0007;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 31072850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31073014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7008;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31073035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2918;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 31073045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8094;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31073114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8072;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31073124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5127;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0852;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 31073175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2912;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 31073201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7395;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31073202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2916;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 31073240 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4335;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073270 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6257;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31073273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7477;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31073347 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2913;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 31073453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.890;LDAF=0.0213;AVGPOST=0.9958;RSQ=0.9225;ERATE=0.0007;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31073469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31073488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0244;AVGPOST=0.9946;RSQ=0.9090;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31073519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9572;ERATE=0.0006;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31073684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9285;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31073726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.6054;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31073762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8274;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31073849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9791;ERATE=0.0003;THETA=0.0021;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31073892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31073926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4059;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0006;THETA=0.0005;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 31074033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31074065 . ACT A 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4592;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31074124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9271;ERATE=0.0003;THETA=0.0035;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31074513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0576;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0012;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 31074602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9501;ERATE=0.0003;THETA=0.0024;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31074606 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7363;ERATE=0.0009;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31074611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0239;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31074645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31074667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0146;AVGPOST=0.9989;RSQ=0.9720;ERATE=0.0003;THETA=0.0024;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31074716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8893;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31074793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.4382;AVGPOST=0.9857;RSQ=0.9785;ERATE=0.0019;THETA=0.0007;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 31074886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9136;ERATE=0.0004;THETA=0.0077;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31075021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2995;AVGPOST=0.9950;RSQ=0.9906;ERATE=0.0008;THETA=0.0006;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 31075050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9567;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31075075 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5686;AVGPOST=0.9849;RSQ=0.9759;ERATE=0.0057;THETA=0.0011;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 31075132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0175;AVGPOST=0.9971;RSQ=0.9350;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31075150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8800;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31075173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31075185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6126;AVGPOST=0.9930;RSQ=0.9882;ERATE=0.0019;THETA=0.0045;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 31075319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6253;AVGPOST=0.9957;RSQ=0.9925;ERATE=0.0006;THETA=0.0007;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 31075354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6242;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 31075361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1052;AVGPOST=0.9977;RSQ=0.9909;ERATE=0.0006;THETA=0.0071;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31075421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7422;ERATE=0.0004;THETA=0.0093;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31075580 rs4012781 T TAA 51406 PASS INDEL;BAVGPOST=0.953;BRSQ=0.917;LDAF=0.6791;AVGPOST=0.9574;RSQ=0.9320;ERATE=0.0009;THETA=0.0005;AC=1502;AN=2184 GT:DS:GL:BD 0.68772894 1
1 31075582 . A AAC 14633 PASS INDEL;BAVGPOST=0.929;BRSQ=0.870;LDAF=0.6239;AVGPOST=0.8764;RSQ=0.8148;ERATE=0.0263;THETA=0.0039;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 31075595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.952;LDAF=0.6060;AVGPOST=0.9780;RSQ=0.9662;ERATE=0.0008;THETA=0.0004;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 31075598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.949;LDAF=0.6064;AVGPOST=0.9786;RSQ=0.9680;ERATE=0.0005;THETA=0.0009;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 31075651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0111;AVGPOST=0.9972;RSQ=0.9043;ERATE=0.0004;THETA=0.0062;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31075753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.949;LDAF=0.5613;AVGPOST=0.9690;RSQ=0.9542;ERATE=0.0025;THETA=0.0012;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 31075883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6539;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31075953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9655;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31075969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7181;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31076006 . TA T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6707;ERATE=0.0005;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31076036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0205;AVGPOST=0.9986;RSQ=0.9764;ERATE=0.0003;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31076043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9050;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31076077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6198;AVGPOST=0.9965;RSQ=0.9944;ERATE=0.0008;THETA=0.0002;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 31076123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6223;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 31076174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31076211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6218;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31076292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31076329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31076349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6221;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31076387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31076399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6226;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0007;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31076423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31076557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6213;AVGPOST=0.9947;RSQ=0.9920;ERATE=0.0016;THETA=0.0004;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 31076599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6216;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31076628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31076688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31076701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3202;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 31076713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31076775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31076870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0482;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 31076916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31076928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9960;RSQ=0.8878;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31076931 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4918;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31076994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3204;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 31077028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8335;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=1820;AN=2184 GT:DS:GL:BD 0.83333331 1
1 31077037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9723;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31077042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0053;AVGPOST=0.9997;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31077057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9606;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31077118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6223;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31077135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8526;AVGPOST=0.9976;RSQ=0.9930;ERATE=0.0007;THETA=0.0003;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 31077137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8576;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31077164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6199;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0007;THETA=0.0005;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 31077210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2428;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 31077284 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7868;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31077381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31077422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31077465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6219;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 31077547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0109;AVGPOST=0.9980;RSQ=0.9366;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31077570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7613;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31077637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7213;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31077669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6212;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 31077695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6216;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 31077773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0472;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31077818 . TC T 18 PASS INDEL;BAVGPOST=0.995;BRSQ=0.164;LDAF=0.0253;AVGPOST=0.9675;RSQ=0.5169;ERATE=0.0014;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31077829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31077832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31077833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3022;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 31078035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8045;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31078135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0100;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31078271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0179;AVGPOST=0.9966;RSQ=0.9185;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31078286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6229;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 31078312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9756;ERATE=0.0005;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31078325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31078347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0187;AVGPOST=0.9985;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31078362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31078366 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1096;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31078457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31078464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6346;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0009;THETA=0.0007;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 31078488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0665;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 31078533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31078545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2979;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 31078554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8979;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31078566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6320;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31078709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4261;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31078725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6333;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0004;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31078731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6907;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31078748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5709;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31078752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0498;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31078758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31078774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0498;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31078837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6338;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 31078922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6318;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=1381;AN=2184 GT:DS:GL:BD 0.63232601 1
1 31078963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8151;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31078999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1097;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31079083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31079155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31079204 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31079246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6342;AVGPOST=0.9957;RSQ=0.9922;ERATE=0.0012;THETA=0.0004;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 31079265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8411;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31079284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6354;AVGPOST=0.9947;RSQ=0.9914;ERATE=0.0010;THETA=0.0002;AC=1388;AN=2184 GT:DS:GL:BD 0.63553113 1
1 31079376 rs80079575 GA G 23259 PASS INDEL;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.3203;AVGPOST=0.9933;RSQ=0.9866;ERATE=0.0008;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 31079379 . AC A 2316 PASS INDEL;BAVGPOST=0.955;BRSQ=0.900;LDAF=0.2920;AVGPOST=0.9429;RSQ=0.8948;ERATE=0.0056;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 31079401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7833;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31079403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9533;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31079418 rs34407537 G GC 16236 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2226;AVGPOST=0.9977;RSQ=0.9941;ERATE=0.0006;THETA=0.0002;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 31079436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31079462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5600;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31079521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9285;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31079536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31079570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6340;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31079654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6031;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31079658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6318;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1380;AN=2184 GT:DS:GL:BD 0.63186812 1
1 31079684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0481;AVGPOST=0.9988;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 31079690 . C CT 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31079696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6328;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0007;THETA=0.0002;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31079698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31079733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31079739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6336;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0011;THETA=0.0002;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31079775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6334;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0005;THETA=0.0003;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31079796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8200;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31079958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6254;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 31080076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8557;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 31080173 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31080259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31080261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6249;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 31080262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7927;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31080445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31080540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31080567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6250;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0004;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 31080573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0471;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31080602 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31080612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6332;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 31080678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6254;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0005;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 31080680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8063;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 31080723 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31080795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31080800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31080835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8560;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 31080836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0316;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0004;THETA=0.0025;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31080899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31080911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4267;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0001;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 31080912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31080958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31080962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5083;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0008;THETA=0.0003;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 31080989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7663;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31081089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9988;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31081153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0330;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31081175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31081273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9623;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31081314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31081423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0003;THETA=0.0022;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31081441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0513;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 31081450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31081488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31081587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31081653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0382;AVGPOST=0.9978;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 31081772 . CAT C 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4767;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31081839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31081943 . G GA 57 PASS INDEL;BAVGPOST=0.988;BRSQ=0.550;LDAF=0.0219;AVGPOST=0.9717;RSQ=0.5009;ERATE=0.0087;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31082002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31082003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31082127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31082152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3022;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 31082287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31082299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9129;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31082313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31082320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.8040;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31082457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4443;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31082489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31082504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31082542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9987;RSQ=0.9822;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31082556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31082574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9596;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31082657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0162;AVGPOST=0.9830;RSQ=0.5991;ERATE=0.0024;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31082658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0121;AVGPOST=0.9889;RSQ=0.6464;ERATE=0.0013;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31082702 . TG T 301 PASS INDEL;BAVGPOST=0.973;BRSQ=0.709;LDAF=0.0423;AVGPOST=0.9781;RSQ=0.8306;ERATE=0.0006;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 31082703 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.777;LDAF=0.0163;AVGPOST=0.9932;RSQ=0.8242;ERATE=0.0009;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31082714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.871;LDAF=0.0654;AVGPOST=0.9979;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 31082715 . T TG 28 PASS INDEL;BAVGPOST=0.979;BRSQ=0.807;LDAF=0.0529;AVGPOST=0.9866;RSQ=0.9161;ERATE=0.0006;THETA=0.0007;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 31082716 . G GT 1060 PASS INDEL;BAVGPOST=0.979;BRSQ=0.813;LDAF=0.0539;AVGPOST=0.9893;RSQ=0.9361;ERATE=0.0004;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31082721 rs71882344 GAA G 2068 PASS INDEL;BAVGPOST=0.983;BRSQ=0.852;LDAF=0.0545;AVGPOST=0.9884;RSQ=0.9301;ERATE=0.0006;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31082778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31082781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31082831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31082842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0366;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31082844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0674;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 31083046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6197;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31083104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31083110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1185;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 31083123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8568;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31083181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7380;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 31083238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31083251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31083256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31083478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1173;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31083526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6638;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31083584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4428;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31083654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31083730 rs2307748 ATCT A 12295 PASS INDEL;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.1169;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0006;THETA=0.0005;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 31083800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31083809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31083986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1176;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31084031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31084058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31084125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31084142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31084180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.8482;AVGPOST=0.9885;RSQ=0.9669;ERATE=0.0026;THETA=0.0004;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 31084213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6888;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31084234 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1174;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31084259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1176;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31084369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31084378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31084398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0363;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31084404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9669;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31084450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31084470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8054;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31084494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31084527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31084642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31084875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31084945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9749;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31084975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31085165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31085175 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4292;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 31085182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31085183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31085204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31085300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31085426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0370;AVGPOST=0.9991;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31085464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6629;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31085465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3261;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 31085492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31085521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3048;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 31085581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31085726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4311;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0011;THETA=0.0001;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 31085855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31085967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31086005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0366;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31086100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9606;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31086197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8222;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31086258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31086328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31086401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31086526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.9956;AVGPOST=0.9984;RSQ=0.8698;ERATE=0.0004;THETA=0.0001;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 31086565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1188;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 31086685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4298;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0001;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 31086730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31086734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31086765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3262;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 31086935 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31086993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4684;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087011 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0381;AVGPOST=0.9977;RSQ=0.9787;ERATE=0.0005;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31087065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31087075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9703;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31087138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5285;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31087332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5829;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31087461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0665;AVGPOST=0.9988;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 31087497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7026;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31087500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7794;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31087534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4034;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.960;LDAF=0.2953;AVGPOST=0.9840;RSQ=0.9707;ERATE=0.0006;THETA=0.0003;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 31087585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.3102;AVGPOST=0.9862;RSQ=0.9752;ERATE=0.0004;THETA=0.0005;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 31087675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6249;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31087850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.1183;AVGPOST=0.9980;RSQ=0.9919;ERATE=0.0005;THETA=0.0002;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 31087876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5995;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087985 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31087990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3271;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 31088030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31088039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9494;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31088050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3269;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 31088365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31088382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31088391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9586;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31088492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31088518 . CA C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4666;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31088587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31088642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31088699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0098;AVGPOST=0.9981;RSQ=0.9348;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31088700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31088755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31088765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9684;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31088848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6443;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31088923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3181;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0006;THETA=0.0008;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 31088967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3116;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 31089050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31089071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31089227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4245;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 31089240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7669;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31089249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4613;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31089346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1052;AVGPOST=0.9981;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 31089372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31089452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7642;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31089697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.8015;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31089707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31089900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0460;AVGPOST=0.9986;RSQ=0.9898;ERATE=0.0004;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31089922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31089991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6792;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31090051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7504;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31090064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31090081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6846;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31090096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31090165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8555;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31090185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31090317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6459;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7567;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31090392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31090445 . GA G 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5105;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2417;AVGPOST=0.9967;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31090466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31090483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8920;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31090515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0468;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31090551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9645;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31090704 rs112973392 CG C 475 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31090749 . CA C 85 PASS INDEL;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0048;AVGPOST=0.9949;RSQ=0.6519;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31090754 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7860;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31090770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31090777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4428;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31090784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0315;AVGPOST=0.9987;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31090923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31091070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5775;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31091089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6638;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31091105 . AT A 2300 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0200;AVGPOST=0.9985;RSQ=0.9676;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31091271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31091277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31091387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0057;AVGPOST=0.9972;RSQ=0.7953;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31091446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31091447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4851;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 31091519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31091580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9362;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31091592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31091656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31091723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0196;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31091752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9788;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31091793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9477;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31091840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0058;AVGPOST=0.9972;RSQ=0.8093;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31091865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9656;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31091933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31092046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9081;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31092203 . AT A 712 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31092318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0257;AVGPOST=0.9987;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31092642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31092788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31092872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31092904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31092986 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31093062 rs5773308 CACCTT C 3790 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0255;AVGPOST=0.9991;RSQ=0.9865;ERATE=0.0003;THETA=0.0019;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31093092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31093150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6781;ERATE=0.0006;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31093284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7700;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31093326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31093412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5241;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31093424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4676;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 31093447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0057;AVGPOST=0.9978;RSQ=0.8511;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31093448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31093532 . AT A 1749 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0193;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31093593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0323;AVGPOST=0.9985;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31093624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0281;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0003;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31093626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9033;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31093661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31093667 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31093716 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9723;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31093719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9997;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31093737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31093766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0230;AVGPOST=0.9986;RSQ=0.9803;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31093783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31093861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0405;AVGPOST=0.9988;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 31093864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0054;AVGPOST=0.9952;RSQ=0.6637;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31093937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9520;ERATE=0.0003;THETA=0.0040;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31094054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31094078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9698;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31094307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31094354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31094377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31094484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2406;AVGPOST=0.9941;RSQ=0.9879;ERATE=0.0007;THETA=0.0009;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31094584 . GGT G 53 PASS INDEL;BAVGPOST=0.991;BRSQ=0.613;LDAF=0.0279;AVGPOST=0.9676;RSQ=0.5302;ERATE=0.0097;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31094625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0409;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 31094637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9753;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31094651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31094706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31094733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31094792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31094917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31094965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9160;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31094974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31094987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1195;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 31095036 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31095115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31095193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31095200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31095256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31095268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0456;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31095281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1041;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0009;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 31095332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31095443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8553;AVGPOST=0.9957;RSQ=0.9862;ERATE=0.0012;THETA=0.0005;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 31095452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31095471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31095477 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31095478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31095572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31095635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9653;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31095661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6910;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31095723 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31095881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31095952 . AGTG A 1650 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9697;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31095965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31096032 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31096037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31096092 rs63526460 AC A 57917 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.4709;AVGPOST=0.9855;RSQ=0.9785;ERATE=0.0026;THETA=0.0004;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 31096096 . CT C 5400 PASS INDEL;BAVGPOST=0.873;BRSQ=0.772;LDAF=0.3511;AVGPOST=0.8452;RSQ=0.7711;ERATE=0.0299;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 31096114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31096152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.9945;AVGPOST=0.9995;RSQ=0.9620;ERATE=0.0003;THETA=0.0008;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 31096204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9186;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31096278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31096279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31096307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6944;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31096344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31096471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31096667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31096678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9600;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31096750 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0328;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0004;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 31096857 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31096874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31096920 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.9097;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31096980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1183;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31097281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0065;AVGPOST=0.9983;RSQ=0.8929;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31097351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31097354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4668;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0007;THETA=0.0001;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 31097521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31097545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31097552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2726;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0008;THETA=0.0003;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 31097678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8943;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31097719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7043;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31097737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2944;AVGPOST=0.9920;RSQ=0.9861;ERATE=0.0020;THETA=0.0002;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 31097756 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7682;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31097995 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9619;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31098015 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4944;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31098018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31098039 . CAAT C 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5361;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31098151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9978;RSQ=0.9179;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31098378 . CT C 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7738;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31098392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9051;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31098494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5092;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31098507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31098512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31098545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1182;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0005;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31098667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9982;RSQ=0.9766;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31098679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0232;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31098698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7153;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31098755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0117;AVGPOST=0.9963;RSQ=0.8788;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31098774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5285;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31098784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7375;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31098811 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5262;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31098839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9966;RSQ=0.8734;ERATE=0.0005;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31099011 rs59392987;rs61530805 AT A 4859 PASS INDEL;BAVGPOST=0.888;BRSQ=0.737;LDAF=0.2771;AVGPOST=0.8826;RSQ=0.7765;ERATE=0.0106;THETA=0.0003;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 31099012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.835;LDAF=0.3157;AVGPOST=0.8498;RSQ=0.7398;ERATE=0.0242;THETA=0.0003;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 31099178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6573;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31099187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0114;AVGPOST=0.9968;RSQ=0.8911;ERATE=0.0007;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31099234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.2402;AVGPOST=0.9937;RSQ=0.9865;ERATE=0.0007;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31099243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.2391;AVGPOST=0.9945;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 31099341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5712;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31099375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8872;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31099430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0305;AVGPOST=0.9958;RSQ=0.9478;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 31099455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9988;RSQ=0.9604;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31099501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3058;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 31099570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31099623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0264;AVGPOST=0.9981;RSQ=0.9757;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31099628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.7155;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31099747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1057;AVGPOST=0.9965;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 31099748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6925;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31099753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31099782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31099845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31099894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31099929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4680;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 31100004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8160;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31100040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9444;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31100042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31100185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1046;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31100194 . CCA C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31100216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31100285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31100569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31100638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7162;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31100667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31100668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0316;AVGPOST=0.9989;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31100727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31100778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8863;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31100812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31100819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31100824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8618;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31100874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31100933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31100963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9232;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31100996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31101036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31101037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4676;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101049 . G GC 6126 PASS INDEL;BAVGPOST=0.974;BRSQ=0.882;LDAF=0.1293;AVGPOST=0.9717;RSQ=0.9039;ERATE=0.0028;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 31101050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4752;AVGPOST=0.9938;RSQ=0.9910;ERATE=0.0014;THETA=0.0002;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 31101051 . AG A 1879 PASS INDEL;BAVGPOST=0.987;BRSQ=0.942;LDAF=0.1144;AVGPOST=0.9935;RSQ=0.9755;ERATE=0.0006;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 31101052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1167;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0004;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 31101134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8563;AVGPOST=0.9980;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 31101235 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3537;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9171;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31101318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1049;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31101400 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5410;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5592;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9972;RSQ=0.8620;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31101479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7016;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31101483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9333;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31101484 . G GC 164 PASS INDEL;BAVGPOST=0.998;BRSQ=0.329;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.6704;ERATE=0.0008;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31101485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.855;LDAF=0.0328;AVGPOST=0.9928;RSQ=0.9097;ERATE=0.0005;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31101489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9524;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31101600 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8807;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31101627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5424;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 31101641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31101679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8601;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 31101769 . GATAA G 1379 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0110;AVGPOST=0.9976;RSQ=0.9169;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31101820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31101827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31101876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9532;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31101887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2399;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 31101920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31101958 . GA G 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5553;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31102000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31102039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0319;AVGPOST=0.9990;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31102108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31102110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31102194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31102275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31102285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31102468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31102505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9761;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31102525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31102536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31102540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3155;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 31102558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0086;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31102633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8601;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 31102702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8677;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31102976 . A AAG 1975 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31103112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31103261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0930;AVGPOST=0.9987;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 31103262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0116;AVGPOST=0.9982;RSQ=0.9428;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31103319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31103479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31103634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3227;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0007;THETA=0.0006;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 31103702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6820;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31103713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6050;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31103728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31103729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6858;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31103857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1180;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31103903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31103918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31104100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31104267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1078;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0008;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 31104268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31104311 . GAGAA G 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31104398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9452;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31104450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31104616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31104618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31104640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31104690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31104731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8788;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31104847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31104914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8845;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31104971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31105060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31105107 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0267;AVGPOST=0.9984;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31105126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31105149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9524;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31105154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7358;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31105172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31105175 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31105194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3034;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 31105336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7419;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31105343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9338;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31105427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31105528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31105531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31105537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31105723 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9667;ERATE=0.0004;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31105758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0398;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31106029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0045;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31106131 . TAAAC T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31106187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5887;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31106200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8360;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31106249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31106272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1047;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31106295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31106300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0004;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31106347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31106364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31106399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31106667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3586;AVGPOST=0.9954;RSQ=0.9921;ERATE=0.0010;THETA=0.0004;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 31106724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31106764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8689;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31106775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8718;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31106778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31106840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31106955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31107051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107131 . T TGCTGG 54618 PASS INDEL;BAVGPOST=0.963;BRSQ=0.910;LDAF=0.2635;AVGPOST=0.9595;RSQ=0.9250;ERATE=0.0152;THETA=0.0004;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 31107156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31107157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31107198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31107389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6592;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0003;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 31107633 . CTGTG C 448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31107654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9992;RSQ=0.9900;ERATE=0.0003;THETA=0.0038;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31107718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31107761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0322;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31107846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31108061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4579;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31108070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7690;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31108078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3155;AVGPOST=0.9883;RSQ=0.9791;ERATE=0.0026;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 31108149 . TG T 890 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31108156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31108192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31108193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31108201 . T TC 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5237;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31108205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31108235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31108267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=0.9979;RSQ=0.9722;ERATE=0.0005;THETA=0.0009;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31108288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31108321 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0096;AVGPOST=0.9973;RSQ=0.8901;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31108388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6659;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 31108432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9646;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31108443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6595;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 31108450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31108457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31108507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31108609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8465;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31108647 . AG A 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9725;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31108678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31108694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1119;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31108780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31109150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31109208 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0010;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31109431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31109448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.6025;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0008;THETA=0.0002;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 31109468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4843;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31109479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6540;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 31109503 rs71795703 CG C 10620 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1098;AVGPOST=0.9975;RSQ=0.9903;ERATE=0.0004;THETA=0.0009;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31109507 . GC G 267 PASS INDEL;BAVGPOST=0.948;BRSQ=0.715;LDAF=0.0977;AVGPOST=0.9608;RSQ=0.8448;ERATE=0.0014;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 31109567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31109606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31109778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1203;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0006;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 31109909 . A AC 2874 PASS INDEL;BAVGPOST=0.969;BRSQ=0.839;LDAF=0.1103;AVGPOST=0.9787;RSQ=0.9172;ERATE=0.0011;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31109959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31109984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110036 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9191;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31110116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31110121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1165;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 31110137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31110140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31110144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8189;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31110181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7320;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31110186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1774;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 31110207 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31110350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0072;AVGPOST=0.9974;RSQ=0.8693;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31110395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1177;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31110476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31110499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0609;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31110663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4702;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31110707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0607;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31110749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31110816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9131;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31110919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9174;ERATE=0.0003;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31110951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31111005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7740;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31111028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31111085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9700;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31111107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31111132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31111183 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2455;AVGPOST=0.9966;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 31111412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6491;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31111429 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31111496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31111529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31111541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8546;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31111567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9608;ERATE=0.0003;THETA=0.0029;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31111594 . A ACTGC 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6218;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31111602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31111645 . CT C 489 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.7880;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31111752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6261;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31111886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7290;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31111903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9510;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31111927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0391;AVGPOST=0.9993;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 31112083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9607;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31112155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31112206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9115;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31112207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31112223 . AAAG A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7374;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31112237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8799;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31112241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0210;AVGPOST=0.9978;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31112243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0179;AVGPOST=0.9987;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31112273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8090;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31112375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31112392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0689;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 31112497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31112637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6020;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 31112644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31112807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1232;AVGPOST=0.9976;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31112814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31112857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9084;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31112902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6004;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0010;THETA=0.0003;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 31113015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31113027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5015;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31113053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31113142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1186;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31113232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1186;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31113362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5564;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31113382 rs72487846 T TC 11177 PASS INDEL;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.1190;AVGPOST=0.9968;RSQ=0.9875;ERATE=0.0007;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31113383 . C CA 1492 PASS INDEL;BAVGPOST=0.986;BRSQ=0.934;LDAF=0.1131;AVGPOST=0.9883;RSQ=0.9566;ERATE=0.0005;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 31113405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31113414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7599;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31113480 MERGED_DEL_2_2733 TCAGTCGGTCCTGCCAGGGGTTCCCAAAGGGAAGTGGAGCAATGGTGGGGCAGAGTGAGGTGAGGTCTGATCCGGGAGATTCCACAGGCTGGGATAAGGGAGTTTGGATTTTTCCACCAAGCAATAAGGAGCTGTTGGTGTCTCTGAGCAGGGCAGGGTTGAGAATCTGAGGAACCCCTGGGAGGGTGCT T . . SV;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5814;ERATE=0.0007;THETA=0.0003;CIEND=-14,37;CIPOS=-28,21;END=31116605;HOMLEN=5;HOMSEQ=CAGTC;SOURCE=EMBLdelly_31113480_31116606,G GT:DS:GL:BD 0.00091575 0
1 31113552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31113559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7933;ERATE=0.0007;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31113573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8112;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31113653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8832;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31113723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4019;AVGPOST=0.9941;RSQ=0.9908;ERATE=0.0007;THETA=0.0006;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 31113740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31113887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31113893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7572;ERATE=0.0005;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31114260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1180;AVGPOST=0.9960;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31114334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.8881;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31114357 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.3044;AVGPOST=0.9813;RSQ=0.9642;ERATE=0.0009;THETA=0.0005;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 31114470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8513;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31114483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7074;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31114488 . G GC 44 PASS INDEL;BAVGPOST=0.995;BRSQ=0.373;LDAF=0.0058;AVGPOST=0.9901;RSQ=0.3492;ERATE=0.0016;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31114492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5795;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31114494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4006;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31114524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9754;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31114587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.848;LDAF=0.0144;AVGPOST=0.9947;RSQ=0.8617;ERATE=0.0007;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31114660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7222;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31114767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31114811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31114850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9196;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31114853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31114914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0088;AVGPOST=0.9972;RSQ=0.8753;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31114934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7280;AVGPOST=0.9962;RSQ=0.9921;ERATE=0.0009;THETA=0.0006;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 31114978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8562;AVGPOST=0.9945;RSQ=0.9844;ERATE=0.0005;THETA=0.0008;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 31114985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.773;LDAF=0.0095;AVGPOST=0.9964;RSQ=0.8395;ERATE=0.0007;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31114990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7886;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31115015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.4283;AVGPOST=0.9860;RSQ=0.9797;ERATE=0.0013;THETA=0.0002;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 31115112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4410;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31115178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1156;AVGPOST=0.9975;RSQ=0.9911;ERATE=0.0004;THETA=0.0047;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 31115248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31115293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4685;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31115351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0457;AVGPOST=0.9977;RSQ=0.9815;ERATE=0.0006;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 31115380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8103;AVGPOST=0.9884;RSQ=0.9715;ERATE=0.0011;THETA=0.0044;AC=1777;AN=2184 GT:DS:GL:BD 0.81364471 1
1 31115390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0077;AVGPOST=0.9962;RSQ=0.8015;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31115405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0174;AVGPOST=0.9957;RSQ=0.9016;ERATE=0.0012;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31115646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7321;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31115667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.656;LDAF=0.0056;AVGPOST=0.9952;RSQ=0.6502;ERATE=0.0010;THETA=0.0076;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31115758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.5344;AVGPOST=0.9725;RSQ=0.9574;ERATE=0.0028;THETA=0.0068;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 31115765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.899;LDAF=0.0671;AVGPOST=0.9771;RSQ=0.8778;ERATE=0.0006;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 31115782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9973;RSQ=0.9782;ERATE=0.0004;THETA=0.0009;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 31115812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0096;AVGPOST=0.9955;RSQ=0.7772;ERATE=0.0013;THETA=0.0096;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31115988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0888;AVGPOST=0.9962;RSQ=0.9834;ERATE=0.0004;THETA=0.0032;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 31115997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8366;AVGPOST=0.9969;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 31116010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0492;AVGPOST=0.9977;RSQ=0.9831;ERATE=0.0003;THETA=0.0011;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 31116014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3414;AVGPOST=0.9960;RSQ=0.9933;ERATE=0.0003;THETA=0.0001;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 31116018 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31116022 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.8513;AVGPOST=0.9968;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 31116037 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3401;AVGPOST=0.9943;RSQ=0.9906;ERATE=0.0006;THETA=0.0008;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 31116076 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0139;AVGPOST=0.9986;RSQ=0.9649;ERATE=0.0003;THETA=0.0064;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31116217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9846;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31116247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31116286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0004;THETA=0.0023;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31116317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0345;AVGPOST=0.9984;RSQ=0.9812;ERATE=0.0004;THETA=0.0028;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31116329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8484;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31116332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31116344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6593;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31116372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.3341;AVGPOST=0.9809;RSQ=0.9681;ERATE=0.0015;THETA=0.0020;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 31116380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8863;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31116388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.8318;AVGPOST=0.9836;RSQ=0.9586;ERATE=0.0008;THETA=0.0005;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 31116436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8461;ERATE=0.0003;THETA=0.0225;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31116511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31116576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0101;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31116592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9827;ERATE=0.0003;THETA=0.0065;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31116618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31116736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0059;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31116813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.954;LDAF=0.3645;AVGPOST=0.9677;RSQ=0.9495;ERATE=0.0009;THETA=0.0179;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 31116964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0109;AVGPOST=0.9987;RSQ=0.9492;ERATE=0.0003;THETA=0.0439;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31116994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0004;THETA=0.0152;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31117021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0282;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31117130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0205;AVGPOST=0.9970;RSQ=0.9504;ERATE=0.0004;THETA=0.0073;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31117158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.903;LDAF=0.2332;AVGPOST=0.9612;RSQ=0.9191;ERATE=0.0025;THETA=0.0144;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 31117227 . TTTCC T 251 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31117257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31117367 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4523;ERATE=0.0004;THETA=0.0178;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31117591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9343;ERATE=0.0004;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31117651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9701;ERATE=0.0003;THETA=0.0089;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31117686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9237;ERATE=0.0004;THETA=0.0232;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31117734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.860;LDAF=0.4216;AVGPOST=0.9100;RSQ=0.8731;ERATE=0.0006;THETA=0.0027;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 31117735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.863;LDAF=0.4209;AVGPOST=0.9106;RSQ=0.8726;ERATE=0.0009;THETA=0.0054;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 31117949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0052;AVGPOST=0.9939;RSQ=0.6007;ERATE=0.0006;THETA=0.0127;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31117955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0083;AVGPOST=0.9940;RSQ=0.7296;ERATE=0.0011;THETA=0.0069;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31117962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.957;LDAF=0.1450;AVGPOST=0.9817;RSQ=0.9479;ERATE=0.0009;THETA=0.0011;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 31117966 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.921;LDAF=0.0223;AVGPOST=0.9943;RSQ=0.8917;ERATE=0.0005;THETA=0.0016;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31117988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0148;AVGPOST=0.9949;RSQ=0.8746;ERATE=0.0006;THETA=0.0035;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31117991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0080;AVGPOST=0.9938;RSQ=0.6859;ERATE=0.0008;THETA=0.0038;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31118048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4745;ERATE=0.0008;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31118107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8726;ERATE=0.0004;THETA=0.0097;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31118153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0074;AVGPOST=0.9952;RSQ=0.7684;ERATE=0.0003;THETA=0.0075;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31118219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31118261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0620;AVGPOST=0.9957;RSQ=0.9707;ERATE=0.0005;THETA=0.0017;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 31118350 rs74835108 AG A 6736 PASS INDEL;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0702;AVGPOST=0.9928;RSQ=0.9579;ERATE=0.0006;THETA=0.0015;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 31118369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7072;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31118372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.9003;ERATE=0.0006;THETA=0.0059;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31118373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.2534;AVGPOST=0.9879;RSQ=0.9764;ERATE=0.0009;THETA=0.0016;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 31118394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31118478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9245;ERATE=0.0003;THETA=0.0035;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31118498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2593;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 31118550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31118585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31118620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31118729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3848;AVGPOST=0.9908;RSQ=0.9856;ERATE=0.0005;THETA=0.0011;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 31118731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2600;AVGPOST=0.9954;RSQ=0.9915;ERATE=0.0004;THETA=0.0011;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 31118741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2601;AVGPOST=0.9951;RSQ=0.9909;ERATE=0.0004;THETA=0.0006;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 31118783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31118851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0080;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31118864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31118880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31119000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31119073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0851;AVGPOST=0.9967;RSQ=0.9852;ERATE=0.0005;THETA=0.0024;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 31119137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2388;AVGPOST=0.9943;RSQ=0.9883;ERATE=0.0004;THETA=0.0009;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 31119175 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9861;ERATE=0.0003;THETA=0.0037;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31119306 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9971;RSQ=0.4061;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119347 . A AG 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4406;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0186;AVGPOST=0.9984;RSQ=0.9623;ERATE=0.0007;THETA=0.0019;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31119380 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31119421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0567;AVGPOST=0.9977;RSQ=0.9835;ERATE=0.0003;THETA=0.0173;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 31119486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0135;AVGPOST=0.9966;RSQ=0.9135;ERATE=0.0004;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31119536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31119545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31119550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.2181;AVGPOST=0.9903;RSQ=0.9784;ERATE=0.0010;THETA=0.0048;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 31119737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8819;ERATE=0.0003;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31119745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2214;AVGPOST=0.9865;RSQ=0.9729;ERATE=0.0020;THETA=0.0046;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 31119929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0577;AVGPOST=0.9965;RSQ=0.9750;ERATE=0.0004;THETA=0.0017;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31119971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9598;ERATE=0.0003;THETA=0.0051;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31120009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31120101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7451;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31120122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31120168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.3865;AVGPOST=0.9853;RSQ=0.9772;ERATE=0.0004;THETA=0.0005;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 31120256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.884;LDAF=0.9608;AVGPOST=0.9916;RSQ=0.9109;ERATE=0.0006;THETA=0.0002;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 31120290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8795;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31120375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8065;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31120386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8095;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31120408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0128;AVGPOST=0.9961;RSQ=0.8678;ERATE=0.0007;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31120462 . GA G 1697 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31120496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31120640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31120648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.6023;AVGPOST=0.9860;RSQ=0.9802;ERATE=0.0016;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 31120659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0168;AVGPOST=0.9973;RSQ=0.9367;ERATE=0.0004;THETA=0.0036;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31120751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0139;AVGPOST=0.9973;RSQ=0.9307;ERATE=0.0005;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31120933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0669;AVGPOST=0.9985;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 31120935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0047;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31120972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31121049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31121171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5872;AVGPOST=0.9947;RSQ=0.9926;ERATE=0.0004;THETA=0.0007;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 31121187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0059;AVGPOST=0.9988;RSQ=0.9124;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31121221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.9219;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31121343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5706;AVGPOST=0.9919;RSQ=0.9881;ERATE=0.0005;THETA=0.0047;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 31121459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0108;AVGPOST=0.9954;RSQ=0.8393;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31121475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8095;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31121527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0443;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0004;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31121539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0003;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31121571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0123;AVGPOST=0.9952;RSQ=0.8337;ERATE=0.0005;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31121611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8898;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31121698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0404;AVGPOST=0.9985;RSQ=0.9836;ERATE=0.0004;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31121841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31121844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31121849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31121962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7560;ERATE=0.0007;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31122013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31122057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31122134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31122164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31122202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31122217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31122221 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.0657;AVGPOST=0.9974;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 31122309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31122326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31122374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31122379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0412;AVGPOST=0.9990;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 31122400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8754;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31122425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1425;AVGPOST=0.9977;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 31122431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31122583 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.524;LDAF=0.0024;AVGPOST=0.9964;RSQ=0.3952;ERATE=0.0015;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31122603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0274;AVGPOST=0.9974;RSQ=0.9645;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31122628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0004;THETA=0.0033;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31122677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0593;AVGPOST=0.9981;RSQ=0.9867;ERATE=0.0003;THETA=0.0035;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 31122741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8669;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31122767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7553;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31122795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.9040;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31122930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31123065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5370;AVGPOST=0.9938;RSQ=0.9907;ERATE=0.0004;THETA=0.0022;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 31123095 rs55900241 TC T 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7754;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31123172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8676;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31123233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0338;AVGPOST=0.9981;RSQ=0.9816;ERATE=0.0003;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 31123502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7093;ERATE=0.0004;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31123536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8375;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31123590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7936;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31123659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7722;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31123660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31123665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8262;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31123942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5192;ERATE=0.0012;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31124009 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4362;AVGPOST=0.9929;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 31124039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31124069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31124134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9608;ERATE=0.0003;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31124245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0234;AVGPOST=0.9987;RSQ=0.9767;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31124376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.807;LDAF=0.2026;AVGPOST=0.9524;RSQ=0.8860;ERATE=0.0036;THETA=0.0054;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 31124987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7895;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31125072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2371;AVGPOST=0.9941;RSQ=0.9877;ERATE=0.0006;THETA=0.0056;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 31125081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8985;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31125108 rs63171160 AG A 24859 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2398;AVGPOST=0.9933;RSQ=0.9843;ERATE=0.0014;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 31125192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0132;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31125234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31125275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31125281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2305;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0004;THETA=0.0010;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 31125287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7897;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31125319 . C CA 757 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8826;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31125424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0414;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0004;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 31125483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31125492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31125562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31125580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9606;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31125588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31125590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31125595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0411;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 31125653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8867;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31125748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0089;AVGPOST=0.9990;RSQ=0.9509;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31125772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31125802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31125889 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9122;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31125900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8760;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31125966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31126011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31126037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31126056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31126105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31126216 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31126222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8749;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31126241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6928;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31126393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31126542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31126557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1335;AVGPOST=0.9953;RSQ=0.9822;ERATE=0.0006;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 31126584 . C CGGAT 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9956;RSQ=0.7555;ERATE=0.0004;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31126595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0049;AVGPOST=0.9965;RSQ=0.7115;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31126636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0313;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31126668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31126678 . G GC 3026 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0332;AVGPOST=0.9973;RSQ=0.9668;ERATE=0.0005;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31126705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9467;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31126781 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8425;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31126896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9227;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31126961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6980;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31127056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9718;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31127061 . CA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31127118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31127266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9597;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31127291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2261;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0008;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 31127315 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.9205;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31127437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31127472 . G GA 394 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8891;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31127477 . T TA 473 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8952;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31127507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31127527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8716;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31128007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31128037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.2333;AVGPOST=0.9729;RSQ=0.9381;ERATE=0.0278;THETA=0.0007;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 31128078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7099;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31128080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.2625;AVGPOST=0.9616;RSQ=0.9330;ERATE=0.0087;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 31128177 . ATGG A 316 PASS INDEL;BAVGPOST=0.927;BRSQ=0.291;LDAF=0.1443;AVGPOST=0.7870;RSQ=0.2960;ERATE=0.0308;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31128281 rs72371979 GACA G 761 PASS INDEL;BAVGPOST=0.950;BRSQ=0.436;LDAF=0.1055;AVGPOST=0.8622;RSQ=0.4390;ERATE=0.0165;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31128626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31128733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.790;LDAF=0.0186;AVGPOST=0.9874;RSQ=0.7351;ERATE=0.0104;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31128751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31128759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31128789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7155;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31128951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31129137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8811;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31129174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5463;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31129175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8911;ERATE=0.0005;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31129180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31129231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8875;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31129237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7657;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31129344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6665;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31129346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31129411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31129418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5961;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31129424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9459;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31129479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9561;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31129481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31129641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.716;LDAF=0.0237;AVGPOST=0.9767;RSQ=0.6158;ERATE=0.0037;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31129659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.740;LDAF=0.0172;AVGPOST=0.9813;RSQ=0.5920;ERATE=0.0030;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31129672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.755;LDAF=0.0288;AVGPOST=0.9703;RSQ=0.5930;ERATE=0.0062;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31129712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9989;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31129733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.505;LDAF=0.0049;AVGPOST=0.9923;RSQ=0.3921;ERATE=0.0018;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31129739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31129779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8929;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31129780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9202;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31129840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0130;AVGPOST=0.9967;RSQ=0.9003;ERATE=0.0008;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31129879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9968;RSQ=0.9513;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31129898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0295;AVGPOST=0.9991;RSQ=0.9892;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31129910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.695;LDAF=0.0356;AVGPOST=0.9671;RSQ=0.6214;ERATE=0.0123;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31129939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.524;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6410;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31129979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0143;AVGPOST=0.9963;RSQ=0.9056;ERATE=0.0007;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31130040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7769;ERATE=0.0006;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31130085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7506;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31130127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7666;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31130226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9345;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31130238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0050;AVGPOST=0.9968;RSQ=0.7563;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31130359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31130364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31130552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31130554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6671;AVGPOST=0.9912;RSQ=0.9859;ERATE=0.0006;THETA=0.0004;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 31130680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.5921;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31130694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31130786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31130904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0071;AVGPOST=0.9935;RSQ=0.6453;ERATE=0.0009;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31131001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5910;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31131092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.780;LDAF=0.0195;AVGPOST=0.9897;RSQ=0.7876;ERATE=0.0010;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31131116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0702;AVGPOST=0.9952;RSQ=0.9713;ERATE=0.0006;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 31131301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7167;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31131304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9642;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31131447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8821;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31131453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9139;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31131460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6942;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9417;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31131493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.539;LDAF=0.0167;AVGPOST=0.9761;RSQ=0.4455;ERATE=0.0051;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31131494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5535;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31131570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31131625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4555;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31131677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31131696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8982;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8356;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8068;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9107;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31131802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0300;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31131807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8703;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31131829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.9044;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31131870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9390;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131908 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9399;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31131947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9528;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31131974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7487;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31132088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9223;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31132127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.8825;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31132153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2169;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 31132345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31132359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9322;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31132405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31132595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31132662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7937;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31132783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31132901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1115;AVGPOST=0.9970;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31132954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31132991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31133008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31133047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31133097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9991;RSQ=0.9678;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31133242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2404;AVGPOST=0.9961;RSQ=0.9921;ERATE=0.0007;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31133243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31133250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31133305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8476;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31133363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31133471 rs72478010 CTGT C 57802 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4316;AVGPOST=0.9918;RSQ=0.9862;ERATE=0.0013;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 31133489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31133517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31133542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31133697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7536;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31133799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31133874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8389;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31133939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31133974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31134058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7697;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31134062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9327;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31134063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31134122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6945;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31134160 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6623;AVGPOST=0.9917;RSQ=0.9874;ERATE=0.0006;THETA=0.0004;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 31134206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31134236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0313;AVGPOST=0.9981;RSQ=0.9753;ERATE=0.0006;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31134298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31134380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31134397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0230;AVGPOST=0.9991;RSQ=0.9812;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31134572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8695;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31134575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31134576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31134601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8622;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31134662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5997;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31134813 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9450;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31134940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9988;RSQ=0.9863;ERATE=0.0004;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31134944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0584;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31134954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5577;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31135005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0380;AVGPOST=0.9988;RSQ=0.9850;ERATE=0.0005;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31135125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0233;AVGPOST=0.9947;RSQ=0.9213;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31135137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0079;AVGPOST=0.9968;RSQ=0.8245;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31135173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0691;AVGPOST=0.9967;RSQ=0.9793;ERATE=0.0007;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 31135178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31135205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31135252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6539;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31135261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8799;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31135278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4680;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31135283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31135338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0682;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 31135404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.949;LDAF=0.0674;AVGPOST=0.9967;RSQ=0.9804;ERATE=0.0007;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 31135429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0682;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 31135459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31135500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31135530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31135550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31135566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31135670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1580;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 31135739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9725;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31135750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31135795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7327;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31135883 . C CA 20865 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6644;AVGPOST=0.9914;RSQ=0.9867;ERATE=0.0005;THETA=0.0001;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 31135886 rs35589353 A AG 70912 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6655;AVGPOST=0.9902;RSQ=0.9848;ERATE=0.0009;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 31135958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31136024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9659;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31136081 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2210;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0011;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 31136148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0334;AVGPOST=0.9990;RSQ=0.9873;ERATE=0.0010;THETA=0.0013;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 31136191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31136263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31136438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9165;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31136441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31136467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9302;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31136488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31136515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0532;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 31136530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2343;AVGPOST=0.9966;RSQ=0.9929;ERATE=0.0006;THETA=0.0004;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 31136594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8482;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31136726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31136751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0093;AVGPOST=0.9955;RSQ=0.8270;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31136759 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31136850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8869;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31136867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5861;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31136913 . GGGCCCTGCCT G 7797 PASS INDEL;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0218;AVGPOST=0.9983;RSQ=0.9695;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31137080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31137150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1952;AVGPOST=0.9962;RSQ=0.9898;ERATE=0.0005;THETA=0.0029;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31137328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9539;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31137340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9597;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31137349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0611;AVGPOST=0.9968;RSQ=0.9790;ERATE=0.0004;THETA=0.0001;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31137364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0535;AVGPOST=0.9972;RSQ=0.9789;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31137390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6611;AVGPOST=0.9904;RSQ=0.9850;ERATE=0.0013;THETA=0.0003;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 31137399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7729;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31137488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0230;AVGPOST=0.9988;RSQ=0.9801;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31137505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8922;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31137554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31137567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8249;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31137569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0723;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 31137577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7780;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31137680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31137720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6809;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31137793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9043;ERATE=0.0003;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31137866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9790;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31137891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1910;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 31137908 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31137915 . ACATT A 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31137976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6262;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31138057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8043;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31138088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31138156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8910;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31138398 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9740;ERATE=0.0003;THETA=0.0033;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31138429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8524;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31138473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8511;ERATE=0.0003;THETA=0.0084;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31138494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9634;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31138528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31138544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31138574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31138595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31138663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31138789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0882;AVGPOST=0.9980;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 31139032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8929;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31139043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31139078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.995;LDAF=0.3396;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 31139156 . C CT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7234;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31139182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4844;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31139204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2024;AVGPOST=0.9944;RSQ=0.9881;ERATE=0.0007;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 31139300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31139304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8100;ERATE=0.0011;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31139388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8660;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31139481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2320;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0009;THETA=0.0001;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 31139567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0533;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0004;THETA=0.0002;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 31139580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.997;LDAF=0.4208;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 31139591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2325;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 31139599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8869;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31139795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31139863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31139884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6474;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31139947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31140229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31140248 rs74398722 G GT 1561 PASS INDEL;BAVGPOST=0.982;BRSQ=0.792;LDAF=0.0561;AVGPOST=0.9594;RSQ=0.7032;ERATE=0.0051;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 31140344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6968;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31140351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0087;AVGPOST=0.9978;RSQ=0.9009;ERATE=0.0005;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31140459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7596;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31140460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31140568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8217;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31140632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6686;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0008;THETA=0.0003;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 31140715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6104;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31140725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31141010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5311;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8778;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31141057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31141149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1160;AVGPOST=0.9976;RSQ=0.9915;ERATE=0.0005;THETA=0.0011;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 31141242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8446;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31141262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9979;RSQ=0.9671;ERATE=0.0007;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31141283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8726;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31141363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4604;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31141503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31141512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31141555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0001;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31141572 rs71924153 CCA C 5236 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0307;AVGPOST=0.9985;RSQ=0.9779;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31141741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1294;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 31141779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0643;AVGPOST=0.9976;RSQ=0.9859;ERATE=0.0005;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 31141785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31141973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31142012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1154;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 31142109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.9056;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31142182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9672;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31142211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8424;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31142221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8952;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31142290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31142440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7835;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31142468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6246;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31142524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0050;AVGPOST=0.9933;RSQ=0.4678;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31142540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5972;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31142746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31142811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2293;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 31143025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31143030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31143035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6672;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 31143052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31143061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7021;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31143063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31143161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9152;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31143243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4307;AVGPOST=0.9960;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 31143328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31143345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31143416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8358;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31143528 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4060;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0016;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 31143563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31143867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2393;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 31143892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.848;LDAF=0.2841;AVGPOST=0.9474;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 31143907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31143956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8610;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31144147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31144244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31144303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31144363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6641;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31144412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.929;LDAF=0.2379;AVGPOST=0.9943;RSQ=0.9881;ERATE=0.0007;THETA=0.0002;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 31144422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.936;LDAF=0.2363;AVGPOST=0.9924;RSQ=0.9847;ERATE=0.0005;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 31144465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31144480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0119;AVGPOST=0.9915;RSQ=0.7474;ERATE=0.0013;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31144496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5823;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31144553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0059;AVGPOST=0.9926;RSQ=0.4878;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31144559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0100;AVGPOST=0.9979;RSQ=0.9029;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31144560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2304;AVGPOST=0.9964;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 31144622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2472;AVGPOST=0.9957;RSQ=0.9908;ERATE=0.0006;THETA=0.0002;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 31144633 . GAAATA G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3286;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31144666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0332;AVGPOST=0.9979;RSQ=0.9716;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31144785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2407;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31144862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0104;AVGPOST=0.9979;RSQ=0.9240;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31145051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31145179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31145237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31145244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6703;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31145328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31145333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31145368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7957;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31145392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31145459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31145469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2419;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 31145478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31145513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31145577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31145579 rs78933796 CA C 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31145731 . CCA C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31145762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3715;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 31145925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2416;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 31145926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8796;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31145975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31145998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9780;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31146000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31146008 . CA C 2702 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31146078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9688;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31146111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31146125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3983;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31146253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31146311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8923;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31146338 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7515;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31146356 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31146357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31146414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2403;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31146489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2413;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31146552 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.8812;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31146637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7852;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31146661 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31147220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8797;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31147244 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31147284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31147344 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31147464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31147595 . TCTC T 10371 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0703;AVGPOST=0.9984;RSQ=0.9894;ERATE=0.0004;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 31147611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31147654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31147664 . TAC T 2185 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9567;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31147792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31147858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2423;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 31147919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31147987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31147993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6679;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 31148023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2396;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31148084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31148135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9627;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31148380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148381 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148497 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31148549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2410;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0005;THETA=0.0008;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 31148566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31148588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8951;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31148628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31148634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31148636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2403;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31148710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31148734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31148740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8121;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31148820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31148940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31148956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1097;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 31149060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9210;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31149068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31149085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31149086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31149124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7069;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31149134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31149193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8568;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31149214 . CCTAA C 406 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8524;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31149303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0302;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31149337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31149472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7011;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31149544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0046;AVGPOST=0.9953;RSQ=0.5684;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31149545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.656;LDAF=0.9868;AVGPOST=0.9898;RSQ=0.7048;ERATE=0.0009;THETA=0.0002;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 31149584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0304;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31149649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2406;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31149702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9541;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31149706 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9078;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31149715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9269;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31149813 rs67768502 TC T 56444 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5018;AVGPOST=0.9867;RSQ=0.9796;ERATE=0.0037;THETA=0.0002;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 31149851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31149907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31149985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2418;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0005;THETA=0.0005;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31150105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31150128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4226;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31150267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8778;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31150268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31150328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0081;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31150482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31150498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31150602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9342;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31150816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.8860;ERATE=0.0006;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31150832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2411;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31150875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6862;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31150990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31151072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31151131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31151219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0368;AVGPOST=0.9948;RSQ=0.9467;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31151266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0082;AVGPOST=0.9964;RSQ=0.8099;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31151319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6682;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 31151363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31151452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2100;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 31151500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2404;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31151532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31151590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31151617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0298;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31151710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31151806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8993;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31151866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8591;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31151881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31151987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0683;AVGPOST=0.9991;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 31151998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0090;AVGPOST=0.9990;RSQ=0.9618;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31152015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9003;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31152051 . T TC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31152209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1189;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 31152318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7476;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31152329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2407;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0006;THETA=0.0007;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31152395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5210;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31152505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.8956;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31152548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8356;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31152606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0064;AVGPOST=0.9950;RSQ=0.6801;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31152707 . TC T 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31152850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5252;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31152954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6494;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31152997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2406;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0010;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31153044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7174;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31153061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7224;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31153082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31153117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31153119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31153120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6805;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31153185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31153252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31153376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9039;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31153432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5182;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31153446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9230;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31153728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31153890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31153891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5197;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31153912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0051;AVGPOST=0.9964;RSQ=0.7542;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31154006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4229;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31154025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.2061;AVGPOST=0.9836;RSQ=0.9630;ERATE=0.0032;THETA=0.0004;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 31154048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.531;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5434;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31154081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7027;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31154101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31154249 . AAAAG A 7293 PASS INDEL;BAVGPOST=0.900;BRSQ=0.752;LDAF=0.2637;AVGPOST=0.8599;RSQ=0.7100;ERATE=0.0459;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 31154250 . AAAG A 16637 PASS INDEL;BAVGPOST=0.963;BRSQ=0.933;LDAF=0.3509;AVGPOST=0.9632;RSQ=0.9446;ERATE=0.0052;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 31154377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0050;AVGPOST=0.9969;RSQ=0.7470;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31154412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2430;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 31154425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8701;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31154446 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31154489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31154533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.8205;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31154594 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.863;LDAF=0.0108;AVGPOST=0.9969;RSQ=0.8847;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31154695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31154713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31154731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2056;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 31154746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31154788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8682;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31154823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31155108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2005;AVGPOST=0.9949;RSQ=0.9891;ERATE=0.0005;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 31155294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0182;AVGPOST=0.9989;RSQ=0.9734;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31155424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.7366;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31155515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31155590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2416;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 31155705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31155745 rs78422901 GC G 8936 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0645;AVGPOST=0.9970;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 31155795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31155851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2406;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31155853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31155956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31155999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6676;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31156009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31156065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31156071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31156210 rs71580103 T TTTTC 24958 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2399;AVGPOST=0.9901;RSQ=0.9782;ERATE=0.0015;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31156426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1208;AVGPOST=0.9972;RSQ=0.9901;ERATE=0.0007;THETA=0.0002;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 31156524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31156604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31156610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2407;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31156758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31156859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31156890 . TC T 2578 PASS INDEL;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.2322;AVGPOST=0.9855;RSQ=0.9679;ERATE=0.0014;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 31156893 rs34152364 CA C 19805 PASS INDEL;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.2387;AVGPOST=0.9953;RSQ=0.9894;ERATE=0.0005;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 31156978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2406;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31156978 . CACA C 191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7134;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31157161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31157334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8256;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31157411 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31157455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0147;AVGPOST=0.9960;RSQ=0.8954;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31157549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31157676 . C CA 297 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7727;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31157681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0312;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31157735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7054;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31157749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31157778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4128;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31157831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9991;RSQ=0.9838;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31158039 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2407;AVGPOST=0.9961;RSQ=0.9910;ERATE=0.0007;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31158067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.0571;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31158102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3708;AVGPOST=0.9958;RSQ=0.9932;ERATE=0.0005;THETA=0.0055;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 31158155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9968;RSQ=0.8040;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31158166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9519;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31158183 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0186;AVGPOST=0.9974;RSQ=0.9400;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31158214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.7547;AVGPOST=0.9874;RSQ=0.9717;ERATE=0.0019;THETA=0.0006;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 31158288 rs113383999 C CCCTT 27570 PASS INDEL;BAVGPOST=0.977;BRSQ=0.941;LDAF=0.7586;AVGPOST=0.9950;RSQ=0.9887;ERATE=0.0007;THETA=0.0002;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 31158291 . T TTCCA 11131 PASS INDEL;BAVGPOST=0.863;BRSQ=0.710;LDAF=0.6367;AVGPOST=0.7238;RSQ=0.5147;ERATE=0.0473;THETA=0.0004;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 31158305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.922;LDAF=0.7304;AVGPOST=0.9076;RSQ=0.8214;ERATE=0.0098;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 31158436 . GC G 402 PASS INDEL;BAVGPOST=0.982;BRSQ=0.486;LDAF=0.0218;AVGPOST=0.9749;RSQ=0.5308;ERATE=0.0017;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31158440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2407;AVGPOST=0.9971;RSQ=0.9933;ERATE=0.0008;THETA=0.0007;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 31158651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6562;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31158778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6495;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31158878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2465;AVGPOST=0.9883;RSQ=0.9751;ERATE=0.0025;THETA=0.0006;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 31159078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31159103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.957;LDAF=0.2299;AVGPOST=0.9879;RSQ=0.9763;ERATE=0.0004;THETA=0.0009;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 31159109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.956;LDAF=0.2298;AVGPOST=0.9878;RSQ=0.9764;ERATE=0.0005;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 31159117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.959;LDAF=0.2299;AVGPOST=0.9872;RSQ=0.9755;ERATE=0.0004;THETA=0.0004;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 31159160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2412;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 31159171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9347;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31159280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8855;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31159412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2398;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0003;THETA=0.0009;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31159460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.7937;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31159508 . A AG 81 PASS INDEL;BAVGPOST=0.968;BRSQ=0.313;LDAF=0.0477;AVGPOST=0.9512;RSQ=0.5910;ERATE=0.0044;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31159526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1051;AVGPOST=0.9945;RSQ=0.9779;ERATE=0.0005;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 31159554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9978;RSQ=0.9734;ERATE=0.0006;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31159586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31159613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31159619 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2406;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0005;THETA=0.0009;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31159761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31159764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31159783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2386;AVGPOST=0.9964;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31159797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2386;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0003;THETA=0.0038;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31159817 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5861;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31159838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9362;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31159852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6217;ERATE=0.0014;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31159865 . G GGA 2031 PASS INDEL;BAVGPOST=0.994;BRSQ=0.866;LDAF=0.0287;AVGPOST=0.9980;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31159868 . A AAG 1714 PASS INDEL;BAVGPOST=0.992;BRSQ=0.834;LDAF=0.0299;AVGPOST=0.9974;RSQ=0.9627;ERATE=0.0005;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31159936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2401;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 31160183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7111;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31160227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9379;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31160250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31160294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6927;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31160295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8850;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31160313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31160359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2421;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0005;THETA=0.0002;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 31160377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31160447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31160478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2413;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 31160495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31160499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9404;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31160569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7930;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31160583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31160672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31160682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31160731 rs112201328 AAG A 115 PASS INDEL;BAVGPOST=0.988;BRSQ=0.616;LDAF=0.0298;AVGPOST=0.9659;RSQ=0.5255;ERATE=0.0089;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31160772 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0680;AVGPOST=0.9956;RSQ=0.9741;ERATE=0.0006;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 31160845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.9015;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31160874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9480;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31161029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31161042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7530;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31161095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8851;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31161412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31161417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31161444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8139;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31161483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1012;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0014;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31161505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0815;AVGPOST=0.9972;RSQ=0.9850;ERATE=0.0004;THETA=0.0009;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 31161514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31161574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2413;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 31161580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1016;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31161746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8018;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31161747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31161761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1291;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 31161852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31162051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8585;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31162177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31162298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31162302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4258;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31162430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5710;AVGPOST=0.9923;RSQ=0.9885;ERATE=0.0011;THETA=0.0006;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 31162442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31162613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31162653 . C CG 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0005;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31162727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7333;ERATE=0.0003;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31162780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5943;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31162805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0004;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31162865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31162942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31163036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1535;AVGPOST=0.9957;RSQ=0.9874;ERATE=0.0004;THETA=0.0008;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 31163044 rs63216060 AC A 27176 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2485;AVGPOST=0.9927;RSQ=0.9851;ERATE=0.0017;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 31163167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31163248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7787;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31163293 . AG A 69 PASS INDEL;BAVGPOST=0.998;BRSQ=0.659;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31163353 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6711;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31163390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0319;AVGPOST=0.9970;RSQ=0.9652;ERATE=0.0006;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31163393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1331;AVGPOST=0.9974;RSQ=0.9918;ERATE=0.0004;THETA=0.0038;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 31163440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7749;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31163443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9333;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31163456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4398;AVGPOST=0.9940;RSQ=0.9916;ERATE=0.0004;THETA=0.0049;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 31163532 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9476;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31163610 rs72224069 T TG 3003 PASS INDEL;BAVGPOST=0.974;BRSQ=0.854;LDAF=0.0996;AVGPOST=0.9833;RSQ=0.9317;ERATE=0.0013;THETA=0.0051;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31163712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31163773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9700;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31163876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3002;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 31164009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9837;ERATE=0.0003;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31164167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.5336;AVGPOST=0.9805;RSQ=0.9703;ERATE=0.0057;THETA=0.0004;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 31164172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31164253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0136;AVGPOST=0.9982;RSQ=0.9419;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31164338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31164379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31164488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3561;AVGPOST=0.9925;RSQ=0.9868;ERATE=0.0018;THETA=0.0037;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 31164489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8786;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31164543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0145;AVGPOST=0.9985;RSQ=0.9633;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31164569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5295;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31164624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5381;AVGPOST=0.9958;RSQ=0.9936;ERATE=0.0004;THETA=0.0042;AC=1177;AN=2184 GT:DS:GL:BD 0.53891939 1
1 31164635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31164648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31164720 rs112807556 T TCTGA 65840 PASS INDEL;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.3124;AVGPOST=0.9750;RSQ=0.9616;ERATE=0.0030;THETA=0.0071;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 31164849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5650;ERATE=0.0003;THETA=0.0143;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31164850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0113;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31164900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7042;ERATE=0.0003;THETA=0.0186;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31164943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7315;ERATE=0.0003;THETA=0.0112;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31165022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0004;THETA=0.0021;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31165108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31165135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0004;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31165198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0083;AVGPOST=0.9975;RSQ=0.8793;ERATE=0.0003;THETA=0.0097;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31165219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7581;ERATE=0.0003;THETA=0.0075;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31165227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0098;AVGPOST=0.9973;RSQ=0.8781;ERATE=0.0009;THETA=0.0043;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31165235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4645;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31165444 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.903;LDAF=0.4167;AVGPOST=0.9302;RSQ=0.8982;ERATE=0.0117;THETA=0.0202;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 31165507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.9129;ERATE=0.0004;THETA=0.0130;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31165525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31165562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6503;ERATE=0.0008;THETA=0.0158;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31165598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7930;ERATE=0.0005;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31165614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0233;AVGPOST=0.9960;RSQ=0.9388;ERATE=0.0005;THETA=0.0117;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31165641 . AAG A 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6638;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31165648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31165703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31165744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9292;ERATE=0.0003;THETA=0.0197;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31165784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0384;AVGPOST=0.9961;RSQ=0.9623;ERATE=0.0012;THETA=0.0124;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31165807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0194;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31165813 . GAAC G 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31165840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0179;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31166308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9647;ERATE=0.0004;THETA=0.0058;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31166320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31166374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8449;ERATE=0.0005;THETA=0.0200;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31166425 rs71919119 T TG 29666 PASS INDEL;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3053;AVGPOST=0.9761;RSQ=0.9565;ERATE=0.0012;THETA=0.0071;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 31166449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1444;AVGPOST=0.9898;RSQ=0.9716;ERATE=0.0004;THETA=0.0055;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 31166565 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4747;ERATE=0.0004;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31166684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9115;ERATE=0.0004;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31166775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0004;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31166788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2484;AVGPOST=0.9936;RSQ=0.9874;ERATE=0.0004;THETA=0.0006;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 31166791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31166793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7389;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31166887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0055;AVGPOST=0.9959;RSQ=0.7016;ERATE=0.0013;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31166902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2443;AVGPOST=0.9940;RSQ=0.9883;ERATE=0.0006;THETA=0.0017;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 31166912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3091;AVGPOST=0.9898;RSQ=0.9812;ERATE=0.0014;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 31166915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8001;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31166931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6253;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31166945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.964;LDAF=0.3042;AVGPOST=0.9880;RSQ=0.9797;ERATE=0.0005;THETA=0.0005;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 31166947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.3043;AVGPOST=0.9873;RSQ=0.9786;ERATE=0.0006;THETA=0.0065;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 31167079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8425;ERATE=0.0005;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31167129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7805;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31167199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31167492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3043;AVGPOST=0.9944;RSQ=0.9898;ERATE=0.0005;THETA=0.0002;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 31167511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9095;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31167561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1957;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31167781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31167806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31167816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8384;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31167843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8956;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31167976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4676;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31167998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1453;AVGPOST=0.9976;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 31168078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 31168083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.8059;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31168092 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31168162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3493;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 31168219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5525;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0006;THETA=0.0007;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 31168270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1081;AVGPOST=0.9977;RSQ=0.9907;ERATE=0.0004;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 31168284 . GC G 105 PASS INDEL;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0042;AVGPOST=0.9963;RSQ=0.6329;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31168315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8995;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31168396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.407;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6556;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31168526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7861;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31168720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31168767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3444;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0007;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 31168784 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0044;AVGPOST=0.9972;RSQ=0.7257;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31168800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31168824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9270;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31168840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7684;ERATE=0.0006;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31168866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8556;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31168922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9319;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31168935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9575;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31168979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31169030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31169104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1914;AVGPOST=0.9963;RSQ=0.9910;ERATE=0.0006;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 31169272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9320;ERATE=0.0006;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31169359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31169411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5142;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31169434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8792;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31169519 MERGED_DEL_2_2738 ATCAGAGAAAGAAACTAGGGCCTTGAGGGCCTGAGGGAGGGGTGTCCTGGAAGAGAAGGAGGAGAGGAGGGAGAGAGGAAGGGAGGTTGGGTTTTGAGCCCCCACTCCCCACCAGATCTTATAATGGGCACTCCACACACTCTGGTCTCTCCCAGCAAGGACTCAGAGCCCTCAGGGTTCAAGGAAACAT A . . SV;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0151;AVGPOST=0.9978;RSQ=0.9346;ERATE=0.0022;THETA=0.0006;CIEND=0,0;CIPOS=0,0;END=31171884;HOMLEN=143;HOMSEQ=TCAGAGAAAGAAACTAGGGCCTTGAGGGCCTGAGGGAGGGGTGTCC GT:DS:GL:BD 0.01419414 0
1 31169677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8522;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31169775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31169846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5880;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31169904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4815;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31169933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31169964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9093;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31170011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31170020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31170025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31170138 . TGA T 310 PASS INDEL;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.8986;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31170153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31170154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31170191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4377;AVGPOST=0.9971;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 31170237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4651;AVGPOST=0.9980;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 31170269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4381;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0005;THETA=0.0006;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 31170298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7621;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31170335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31170348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31170374 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31170431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31170462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5950;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31170463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.8986;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31170532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4359;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 31170602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8440;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31170653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4759;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 31170790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4288;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0008;THETA=0.0002;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 31170823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4289;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0006;THETA=0.0004;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 31170866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8893;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31171038 . TG T 8261 PASS INDEL;BAVGPOST=0.953;BRSQ=0.922;LDAF=0.4292;AVGPOST=0.9154;RSQ=0.8856;ERATE=0.0181;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 31171041 rs66904109 GT G 36539 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4749;AVGPOST=0.9909;RSQ=0.9877;ERATE=0.0024;THETA=0.0007;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 31171232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8982;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31171352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.7796;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31171521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31171647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1340;AVGPOST=0.9982;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31171673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0273;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31171692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8967;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31171745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4156;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31171796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31171840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31171856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31171904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.8135;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31172039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31172113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31172173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31172248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31172250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6459;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31172474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4532;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 31172597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31172636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31172707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31172746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1093;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 31172791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31172858 . CATCT C 3899 PASS INDEL;BAVGPOST=0.994;BRSQ=0.898;LDAF=0.0315;AVGPOST=0.9909;RSQ=0.8784;ERATE=0.0040;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31172900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8229;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31172999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31173032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4200;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0002;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 31173035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31173060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31173073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31173099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31173131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31173133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2735;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 31173295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8255;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31173348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31173369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31173381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31173498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1091;AVGPOST=0.9979;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 31173545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31173577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31173644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6805;ERATE=0.0010;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31173651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4239;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0003;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 31173708 . A AG 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6649;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31173904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1380;AVGPOST=0.9976;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 31174029 rs5773311 GGTTT G 34611 PASS INDEL;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2727;AVGPOST=0.9971;RSQ=0.9940;ERATE=0.0007;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 31174053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4239;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0011;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 31174071 . GCT G 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31174163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31174170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31174211 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0100;AVGPOST=0.9969;RSQ=0.8733;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31174234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9352;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31174371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31174398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31174417 . TCA T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4361;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31174420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31174519 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1368;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 31174677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1491;AVGPOST=0.9983;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 31174740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2712;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0006;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 31174767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4179;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0010;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31174777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31174839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31175002 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4116;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31175124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31175142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31175144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9018;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31175214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31175263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31175280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31175294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31175312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31175361 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31175505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4005;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 31175571 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5813;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 31175676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5813;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 31175688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7528;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31175844 rs67363800 AAGAT A 19501 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1388;AVGPOST=0.9957;RSQ=0.9848;ERATE=0.0026;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 31175889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31175907 . AATAG A 811 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9003;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31175910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.8976;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31175975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31176003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31176056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31176175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4187;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31176224 rs59133811 T TG 55225 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4184;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31176261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7863;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31176419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31176512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.0832;AVGPOST=0.9945;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 31176680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31176804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4185;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31176910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7029;ERATE=0.0012;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31176942 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2819;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 31176972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31177003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8388;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31177073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4187;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31177163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31177269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4080;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31177275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.890;LDAF=0.5356;AVGPOST=0.8971;RSQ=0.8447;ERATE=0.0493;THETA=0.0002;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 31177340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.5370;ERATE=0.0013;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31177378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4185;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0006;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4188;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4182;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4187;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7615;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31177610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6382;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31177802 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0127;AVGPOST=0.9986;RSQ=0.9552;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31177806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9479;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31177847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4195;AVGPOST=0.9842;RSQ=0.9761;ERATE=0.0032;THETA=0.0006;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 31177880 rs66700654 C CG 18859 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4199;AVGPOST=0.9910;RSQ=0.9857;ERATE=0.0015;THETA=0.0002;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31177881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31177888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4187;AVGPOST=0.9898;RSQ=0.9846;ERATE=0.0026;THETA=0.0008;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 31177993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1520;AVGPOST=0.9975;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 31178042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4186;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31178080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31178137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31178147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8604;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31178177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7339;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31178222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7993;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31178240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.5937;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31178294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7421;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31178310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4179;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 31178333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31178351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4183;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 31178389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7296;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31178444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1469;AVGPOST=0.9962;RSQ=0.9867;ERATE=0.0005;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 31178501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0414;AVGPOST=0.9941;RSQ=0.9470;ERATE=0.0003;THETA=0.0024;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31178545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1446;AVGPOST=0.9977;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178606 . GT G 5061 PASS INDEL;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1320;AVGPOST=0.9899;RSQ=0.9676;ERATE=0.0005;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 31178608 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.964;LDAF=0.1323;AVGPOST=0.9909;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 31178609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.964;LDAF=0.1320;AVGPOST=0.9905;RSQ=0.9695;ERATE=0.0003;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 31178609 rs34303518 A AC 7153 PASS INDEL;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1317;AVGPOST=0.9893;RSQ=0.9649;ERATE=0.0005;THETA=0.0010;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 31178639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1447;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1447;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8933;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31178783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2745;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0008;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 31178820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31178823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1449;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1452;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31178941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1449;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31178961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31179008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1449;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31179088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1449;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 31179146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6076;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31179262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1419;AVGPOST=0.9942;RSQ=0.9803;ERATE=0.0009;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 31179399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31179415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7033;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31179428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.8994;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31179472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31179604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0087;AVGPOST=0.9994;RSQ=0.9662;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31179605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8720;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31179677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4815;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 31179717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0169;AVGPOST=0.9977;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31179720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0153;AVGPOST=0.9977;RSQ=0.9371;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31179803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1463;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31179853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8731;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31180025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0129;AVGPOST=0.9967;RSQ=0.9028;ERATE=0.0010;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31180054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7808;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31180063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31180121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8873;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31180138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1463;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0011;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31180164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8033;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31180294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31180400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6819;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31180418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0005;THETA=0.0007;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 31180424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8370;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31180507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8800;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31180537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1365;AVGPOST=0.9971;RSQ=0.9899;ERATE=0.0006;THETA=0.0004;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 31180553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31180578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31180610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1484;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 31180646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0047;AVGPOST=0.9942;RSQ=0.5467;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31180714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1465;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31180761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1460;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31180888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0079;AVGPOST=0.9972;RSQ=0.8494;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31180921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.867;LDAF=0.0144;AVGPOST=0.9926;RSQ=0.7973;ERATE=0.0013;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31180972 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1463;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31181032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31181054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1462;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31181074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2064;AVGPOST=0.9952;RSQ=0.9882;ERATE=0.0005;THETA=0.0009;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 31181105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6882;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5424;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31181192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1603;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 31181212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1345;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 31181302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8578;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31181308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7501;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31181363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31181392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1340;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31181395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1593;AVGPOST=0.9983;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 31181478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1341;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31181528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8572;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31181639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1340;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31181702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31181786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4782;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31181886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8345;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31182055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31182312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6113;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 31182390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1344;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 31182395 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31182399 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9174;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31182401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31182428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4768;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0006;THETA=0.0002;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 31182450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8574;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31182488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0282;AVGPOST=0.9981;RSQ=0.9743;ERATE=0.0004;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31182515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31182516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31182549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8860;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31182572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7878;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31182587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31182613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31182616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31182619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31182651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31182652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31182656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31182715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9408;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31182762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31182892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2749;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0007;THETA=0.0003;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 31182945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8347;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31182951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31183001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31183003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1312;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 31183030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1626;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0008;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 31183057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1625;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 31183067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31183112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5758;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31183138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31183251 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31183335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1213;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 31183369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31183385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31183387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31183435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1235;AVGPOST=0.9980;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31183461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7297;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31183486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2911;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0007;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 31183593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31183608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8134;ERATE=0.0014;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31183670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8767;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31183708 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4304;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31183711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31183728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8964;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31183742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7305;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31183767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1628;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 31183812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2923;AVGPOST=0.9969;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 31183905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0043;AVGPOST=0.9933;RSQ=0.3967;ERATE=0.0012;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31183907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31184218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5628;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 31184290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31184319 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8331;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31184326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31184340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9615;ERATE=0.0005;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31184368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5602;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 31184529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5591;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 31184549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1264;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 31184552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5623;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 31184636 . A AC 28 PASS INDEL;BAVGPOST=0.900;BRSQ=0.043;LDAF=0.1317;AVGPOST=0.8048;RSQ=0.3204;ERATE=0.0100;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 31184648 . A AGG 162 PASS INDEL;BAVGPOST=0.977;BRSQ=0.392;LDAF=0.0402;AVGPOST=0.9427;RSQ=0.4056;ERATE=0.0094;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31184669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31184747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0157;AVGPOST=0.9970;RSQ=0.9380;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31184749 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2705;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 31184763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5589;AVGPOST=0.9958;RSQ=0.9936;ERATE=0.0016;THETA=0.0002;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 31184779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5624;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 31184820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31184846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31184857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5618;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 31184878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5619;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 31184944 . TG T 251 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31185020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7388;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31185036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31185087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31185098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9231;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31185100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31185106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5608;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0007;THETA=0.0002;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 31185125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5607;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 31185127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8639;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31185190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31185371 . TCA T 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0039;AVGPOST=0.9952;RSQ=0.4919;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31185428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31185431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31185443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9363;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31185448 . CTT C 4113 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0293;AVGPOST=0.9972;RSQ=0.9579;ERATE=0.0009;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 31185499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9997;RSQ=0.9220;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31185530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31185531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1602;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 31185551 rs78546272 TC T 25156 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.5535;AVGPOST=0.9578;RSQ=0.9351;ERATE=0.0084;THETA=0.0003;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 31185574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31185582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31185870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31186035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31186094 rs72510618 T TA 32274 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2889;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0008;THETA=0.0002;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 31186254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.942;LDAF=0.5480;AVGPOST=0.9564;RSQ=0.9270;ERATE=0.0328;THETA=0.0003;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 31186265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31186271 . C CTT 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6319;ERATE=0.0019;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31186379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31186387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2702;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 31186398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31186400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31186459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31186551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7807;ERATE=0.0012;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31186620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9997;RSQ=0.9550;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31186720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31186729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.8995;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31186872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0451;AVGPOST=0.9981;RSQ=0.9842;ERATE=0.0006;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 31187164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31187213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8516;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31187223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31187488 . TG T 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1598;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 31187563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31187596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31187789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31187807 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6376;AVGPOST=0.9991;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 31187861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31187862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8774;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31187899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31187930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31188019 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31188026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2852;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 31188286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31188316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2947;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 31188460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31188546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31188700 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31188901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6101;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0004;THETA=0.0015;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 31188923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31188971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31189044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31189060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31189194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0014;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31189196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31189444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31189494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31189499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31189598 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31189614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31189645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31189686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31189689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31189700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31189701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31189794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31189812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31190276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31190278 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0176;AVGPOST=0.9964;RSQ=0.9202;ERATE=0.0004;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31190340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7741;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31190480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.521;LDAF=0.9044;AVGPOST=0.8953;RSQ=0.5242;ERATE=0.0261;THETA=0.0003;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 31190506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.834;BRSQ=0.717;LDAF=0.4908;AVGPOST=0.7926;RSQ=0.6941;ERATE=0.0477;THETA=0.0003;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 31190506 . G GT 727 PASS INDEL;BAVGPOST=0.716;BRSQ=0.392;LDAF=0.2896;AVGPOST=0.7365;RSQ=0.5171;ERATE=0.0254;THETA=0.0004;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 31190511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.610;LDAF=0.0366;AVGPOST=0.9558;RSQ=0.4967;ERATE=0.0059;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31190660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6685;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31190843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.873;LDAF=0.0270;AVGPOST=0.9850;RSQ=0.7767;ERATE=0.0028;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31191032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0284;AVGPOST=0.9979;RSQ=0.9643;ERATE=0.0006;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31191093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.5731;AVGPOST=0.9905;RSQ=0.9849;ERATE=0.0010;THETA=0.0002;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 31191214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0156;AVGPOST=0.9979;RSQ=0.9360;ERATE=0.0007;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31191257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0374;AVGPOST=0.9883;RSQ=0.8735;ERATE=0.0011;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31191438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.533;LDAF=0.2610;AVGPOST=0.8246;RSQ=0.6401;ERATE=0.0106;THETA=0.0006;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 31191466 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.919;LDAF=0.6126;AVGPOST=0.9493;RSQ=0.9211;ERATE=0.0030;THETA=0.0003;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 31191516 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2820;AVGPOST=0.9931;RSQ=0.9868;ERATE=0.0007;THETA=0.0003;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 31191575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31191579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31191849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5556;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31192039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0225;AVGPOST=0.9966;RSQ=0.9373;ERATE=0.0010;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31192128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1297;AVGPOST=0.9963;RSQ=0.9860;ERATE=0.0007;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 31192173 . C CG 318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9968;RSQ=0.8211;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31192296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0084;AVGPOST=0.9979;RSQ=0.9078;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31192301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6645;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31192304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5754;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0007;THETA=0.0004;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 31192318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0138;AVGPOST=0.9986;RSQ=0.9532;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31192330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2686;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0002;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 31192388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8615;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31192494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31192650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2716;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 31192712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31192726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31192769 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31192836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31192945 rs10553997 CTA C 18222 PASS INDEL;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1616;AVGPOST=0.9856;RSQ=0.9604;ERATE=0.0027;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 31193041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6136;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31193092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1282;AVGPOST=0.9928;RSQ=0.9741;ERATE=0.0012;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 31193114 . G GAGCT 392 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7634;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31193236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31193433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31193559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31193792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31193809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31193860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5471;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31193994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31194216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31194489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0013;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31194516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31194539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31194702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8881;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31194784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1564;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 31194799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31194826 rs6143177 CCTTGGGCCATTTG C 43829 PASS INDEL;BAVGPOST=0.939;BRSQ=0.859;LDAF=0.2899;AVGPOST=0.9728;RSQ=0.9480;ERATE=0.0033;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 31194921 rs35123244 A AG 21877 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2746;AVGPOST=0.9939;RSQ=0.9886;ERATE=0.0007;THETA=0.0005;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 31194922 . G GC 2900 PASS INDEL;BAVGPOST=0.953;BRSQ=0.883;LDAF=0.2354;AVGPOST=0.9262;RSQ=0.8519;ERATE=0.0127;THETA=0.0003;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 31194997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31195021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9467;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31195107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7202;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31195108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2702;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 31195192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31195241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0045;AVGPOST=0.9962;RSQ=0.6540;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31195277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4188;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31195423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6737;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31195572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9370;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31195670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31195673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31195740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31195776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31196047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31196179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31196184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31196255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2060;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 31196329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31196423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31196424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8585;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31196464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0934;AVGPOST=0.9970;RSQ=0.9862;ERATE=0.0005;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 31196473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9108;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31196474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0095;AVGPOST=0.9964;RSQ=0.8442;ERATE=0.0008;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31196528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0067;AVGPOST=0.9957;RSQ=0.7189;ERATE=0.0011;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31196544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.6442;ERATE=0.0012;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31196547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.3760;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31196585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31196620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8473;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31196670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31196706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.891;LDAF=0.0387;AVGPOST=0.9902;RSQ=0.8922;ERATE=0.0010;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31196823 . T TC 1278 PASS INDEL;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0165;AVGPOST=0.9972;RSQ=0.9347;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31196896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31196900 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0092;AVGPOST=0.9978;RSQ=0.9057;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31196975 . GC G 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31197006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31197024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31197045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2468;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 31197064 . T TGGGCA 214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5796;ERATE=0.0011;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31197158 . G GC 1131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9624;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31197326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8725;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31197401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2693;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0001;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 31197569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31197612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0086;AVGPOST=0.9970;RSQ=0.8649;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31197650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9438;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31197739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9441;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31197784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8544;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31197799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3836;AVGPOST=0.9969;RSQ=0.9943;ERATE=0.0006;THETA=0.0003;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 31197901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31197913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1553;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 31198011 . ATCAC A 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4503;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31198094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9300;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31198124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0828;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 31198168 . AG A 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8185;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31198428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5946;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31198517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4652;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 31198561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0125;AVGPOST=0.9990;RSQ=0.9684;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31198613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31198637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6249;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31198699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0157;AVGPOST=0.9970;RSQ=0.9220;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31198733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6195;AVGPOST=0.9947;RSQ=0.9912;ERATE=0.0007;THETA=0.0005;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 31198755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4134;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31198925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7631;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31198930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8116;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31198978 . CAG C 72 PASS INDEL;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4641;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31199146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31199157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31199254 . CG C 160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.5678;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31199421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0233;AVGPOST=0.9983;RSQ=0.9718;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31199651 . C CAAAT 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31199762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31199878 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1561;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 31199940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5778;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4423;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7582;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31200070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200147 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7350;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31200194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1540;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0005;THETA=0.0002;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 31200240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8714;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31200255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7672;ERATE=0.0008;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31200293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8252;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31200295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1258;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 31200342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8392;AVGPOST=0.9968;RSQ=0.9910;ERATE=0.0013;THETA=0.0003;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 31200344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31200436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2064;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 31200474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3652;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0005;THETA=0.0005;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 31200523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7502;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31200696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8279;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31200707 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0528;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 31200712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8335;ERATE=0.0003;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31200732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31200819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6782;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31201002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6541;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31201005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8181;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31201251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7075;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31201285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9238;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31201288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6039;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31201299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1231;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0004;THETA=0.0002;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 31201340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5242;AVGPOST=0.9849;RSQ=0.9781;ERATE=0.0029;THETA=0.0014;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 31201350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8248;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31201382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8615;ERATE=0.0003;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31201490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31201587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31201626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0256;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0003;THETA=0.0093;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31201832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7791;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31201899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6521;AVGPOST=0.9931;RSQ=0.9883;ERATE=0.0007;THETA=0.0003;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 31201917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.2992;AVGPOST=0.9896;RSQ=0.9821;ERATE=0.0007;THETA=0.0070;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 31201956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2473;AVGPOST=0.9941;RSQ=0.9874;ERATE=0.0007;THETA=0.0002;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 31201980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2489;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 31202087 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9650;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31202199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8519;ERATE=0.0004;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31202203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31202258 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9253;ERATE=0.0003;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31202269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31202272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31202377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.9030;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31202390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8753;ERATE=0.0003;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31202485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7560;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31202489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31202566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31202575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31202615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8223;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31202630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9110;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31202635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31202663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4324;AVGPOST=0.9929;RSQ=0.9882;ERATE=0.0007;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 31202841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6765;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31203044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31203246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6633;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31203249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8436;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31203397 . CCA C 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3700;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31203422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6484;ERATE=0.0005;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31203428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0176;AVGPOST=0.9971;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31203470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31203488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2160;AVGPOST=0.9940;RSQ=0.9857;ERATE=0.0004;THETA=0.0002;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 31203489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7124;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31203563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31203614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0035;AVGPOST=0.9955;RSQ=0.5184;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31203621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0697;AVGPOST=0.9953;RSQ=0.9735;ERATE=0.0006;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 31203713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9201;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31203741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8574;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31203773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9994;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31203860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0966;AVGPOST=0.9984;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 31204005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7393;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31204376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31204512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31204528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7248;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31204563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31204582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31204770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5943;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31204779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7583;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31204869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9959;RSQ=0.5730;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31204883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8809;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31204957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31205126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.525;LDAF=0.0861;AVGPOST=0.8935;RSQ=0.4458;ERATE=0.0258;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 31205279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0093;AVGPOST=0.9957;RSQ=0.8076;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31205286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8939;ERATE=0.0005;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31205395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0729;AVGPOST=0.9969;RSQ=0.9831;ERATE=0.0003;THETA=0.0008;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 31205487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3856;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31205535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4169;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31205562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9574;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31205630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9523;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31205678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31205681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5892;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31205690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8349;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31205700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9260;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31205789 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0116;AVGPOST=0.9978;RSQ=0.9295;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31205796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6372;AVGPOST=0.9944;RSQ=0.9914;ERATE=0.0008;THETA=0.0002;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 31206061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0006;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31206062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9568;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31206169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5602;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31206200 . TA T 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8722;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31206201 rs28362505 AG A 28 PASS INDEL;BAVGPOST=0.997;BRSQ=0.493;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.5610;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31206357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.7399;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31206375 . TCAC T 823 PASS INDEL;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0258;AVGPOST=0.9961;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 31206376 . CACCA C 5034 PASS INDEL;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0264;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31206488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31206637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1321;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 31206719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31206746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31206771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31206806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3826;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 31206957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3826;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 31206960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7311;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31207171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0267;AVGPOST=0.9992;RSQ=0.9875;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31207234 . TA T 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4978;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31207256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2140;AVGPOST=0.9976;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 31207492 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207502 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31207566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7077;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2838;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0014;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 31207792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9209;ERATE=0.0004;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31207795 . G GA 159 PASS INDEL;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0060;AVGPOST=0.9961;RSQ=0.7115;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31207800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31207826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207867 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31207902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0731;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0046;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 31207995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31208042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1367;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0005;THETA=0.0056;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 31208135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0114;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31208162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0044;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31208239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9779;ERATE=0.0003;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31208427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0003;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31208486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31208783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9591;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31208904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0166;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31208916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9403;ERATE=0.0003;THETA=0.0111;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31209005 . G GGT 246 PASS INDEL;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0094;AVGPOST=0.9963;RSQ=0.8352;ERATE=0.0006;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31209172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0058;AVGPOST=0.9969;RSQ=0.8127;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31209219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9518;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31209384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.956;LDAF=0.0974;AVGPOST=0.9806;RSQ=0.9214;ERATE=0.0015;THETA=0.0010;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 31209454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.2853;ERATE=0.0003;THETA=0.0022;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31209625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8747;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31209774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1541;ERATE=0.0004;THETA=0.0078;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31209796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3730;AVGPOST=0.9864;RSQ=0.9796;ERATE=0.0008;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 31209840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0224;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0003;THETA=0.0018;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31210053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31210111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0179;AVGPOST=0.9987;RSQ=0.9697;ERATE=0.0005;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31210150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31210178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7574;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31210192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7425;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31210200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9529;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31210212 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0038;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31210272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31210294 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5043;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31210442 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8863;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31210614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31210653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31210667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1802;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0003;THETA=0.0016;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 31210757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31210790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0231;AVGPOST=0.9987;RSQ=0.9777;ERATE=0.0006;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31210852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1932;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 31210855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7031;AVGPOST=0.9959;RSQ=0.9922;ERATE=0.0004;THETA=0.0025;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 31211018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31211020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7942;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31211034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31211082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1925;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 31211211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31211256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9803;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31211282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7035;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0005;THETA=0.0007;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 31211389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1120;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0007;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31211515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31211542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9176;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31211679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31211894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31211913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31212062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31212074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31212154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9986;RSQ=0.9659;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31212241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1911;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 31212251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0117;AVGPOST=0.9954;RSQ=0.8534;ERATE=0.0006;THETA=0.0018;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31212297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31212306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31212314 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1948;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31212338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31212376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5618;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 31212578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31212666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31212687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7865;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31212731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31212838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31212971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31213180 . GA G 469 PASS INDEL;BAVGPOST=0.994;BRSQ=0.832;LDAF=0.0089;AVGPOST=0.9954;RSQ=0.7944;ERATE=0.0008;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31213246 . TC T 2724 PASS INDEL;BAVGPOST=0.792;BRSQ=0.599;LDAF=0.4121;AVGPOST=0.8014;RSQ=0.6560;ERATE=0.0184;THETA=0.0045;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 31213286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5682;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31213420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31213537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8223;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31213558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7922;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31213574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1201;AVGPOST=0.9894;RSQ=0.9636;ERATE=0.0005;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 31213587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9051;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31213608 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8282;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31213616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7545;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31213853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31213854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.728;LDAF=0.0098;AVGPOST=0.9924;RSQ=0.7362;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31213924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31214017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7233;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31214195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31214265 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9257;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31214283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9265;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31214346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31214369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0830;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 31214388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9999;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31214391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31214462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31214468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31214495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31214558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31214571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31214597 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31214600 . GC G 616 PASS INDEL;BAVGPOST=0.947;BRSQ=0.372;LDAF=0.1211;AVGPOST=0.8414;RSQ=0.3909;ERATE=0.0060;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31214604 . CT C 2603 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0248;AVGPOST=0.9964;RSQ=0.9435;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31214613 rs3833525 CAG C 1934 PASS INDEL;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0154;AVGPOST=0.9941;RSQ=0.8704;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31214820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3754;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0032;THETA=0.0035;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 31214879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31214884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31214971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5002;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0026;THETA=0.0004;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 31215048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31215062 rs3833526 TG T 1201 PASS INDEL;BAVGPOST=0.994;BRSQ=0.795;LDAF=0.0113;AVGPOST=0.9948;RSQ=0.8094;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31215067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9674;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31215141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8967;ERATE=0.0015;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31215154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31215274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31215287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31215304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31215364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6092;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0022;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 31215429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31215446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31215534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0029;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31215547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31215568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31215712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31215766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8145;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31215783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31215800 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31215958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31215975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216139 . GTATT G 795 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8390;ERATE=0.0013;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31216263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31216280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6624;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31216383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9800;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31216450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8509;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31216465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31216639 . T TG 21 PASS INDEL;BAVGPOST=0.992;BRSQ=0.382;LDAF=0.0145;AVGPOST=0.9768;RSQ=0.3630;ERATE=0.0036;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31216969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.1569;AVGPOST=0.9848;RSQ=0.9622;ERATE=0.0004;THETA=0.0006;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 31216999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6312;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31217342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7698;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31217386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31217459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8767;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31217474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31217557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7467;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31217584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31217611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5250;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31217728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31217851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1305;AVGPOST=0.9926;RSQ=0.9754;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 31218002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31218011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.8927;ERATE=0.0011;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31218118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6072;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31218197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6026;ERATE=0.0008;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31218271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0080;AVGPOST=0.9947;RSQ=0.7274;ERATE=0.0011;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31218279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0957;AVGPOST=0.9934;RSQ=0.9696;ERATE=0.0006;THETA=0.0007;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 31218356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9065;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31218374 . C CT 676 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8758;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31218395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7663;ERATE=0.0004;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31218436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0153;AVGPOST=0.9925;RSQ=0.8278;ERATE=0.0006;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31218463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9244;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31218489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31218529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.750;LDAF=0.0056;AVGPOST=0.9960;RSQ=0.6952;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31218544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8925;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31218608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31218652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7548;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31218931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31219069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0256;AVGPOST=0.9976;RSQ=0.9690;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31219070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31219289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1003;AVGPOST=0.9938;RSQ=0.9737;ERATE=0.0005;THETA=0.0010;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 31219301 . CA C 668 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0120;AVGPOST=0.9987;RSQ=0.9565;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31219348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9743;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31219349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7607;ERATE=0.0007;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31219369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31219488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31219550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31219627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31219682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31219705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0026;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31219707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31219712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.8945;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31219715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.3501;AVGPOST=0.9811;RSQ=0.9694;ERATE=0.0005;THETA=0.0017;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 31219721 . AG A 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.4459;ERATE=0.0013;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31219744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31219823 . ACT A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4608;ERATE=0.0004;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31220184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7118;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31220200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0007;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31220219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.801;LDAF=0.0160;AVGPOST=0.9927;RSQ=0.8144;ERATE=0.0003;THETA=0.0052;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31220250 . C CA 613 PASS INDEL;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.6787;ERATE=0.0009;THETA=0.0084;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31220429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.573;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6316;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31220510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0209;AVGPOST=0.9982;RSQ=0.9653;ERATE=0.0004;THETA=0.0048;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31220629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31220655 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9294;ERATE=0.0003;THETA=0.0036;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31220736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8967;ERATE=0.0004;THETA=0.0104;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31220752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31220867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31220939 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31220999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8663;ERATE=0.0006;THETA=0.0058;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31221066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7314;ERATE=0.0007;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31221219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9405;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31221232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31221292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31221382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31221512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0117;AVGPOST=0.9988;RSQ=0.9617;ERATE=0.0003;THETA=0.0136;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31221515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.938;LDAF=0.0623;AVGPOST=0.9863;RSQ=0.9207;ERATE=0.0005;THETA=0.0011;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 31221542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8971;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31221552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0060;AVGPOST=0.9956;RSQ=0.6941;ERATE=0.0004;THETA=0.0063;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31221554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31221577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8827;ERATE=0.0003;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31221608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0004;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31221704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0117;AVGPOST=0.9976;RSQ=0.9287;ERATE=0.0003;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31221767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0107;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31221888 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0180;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31221918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.905;LDAF=0.1856;AVGPOST=0.9609;RSQ=0.9060;ERATE=0.0018;THETA=0.0021;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 31221991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.882;LDAF=0.3070;AVGPOST=0.9421;RSQ=0.9034;ERATE=0.0031;THETA=0.0124;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 31222011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31222026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8637;ERATE=0.0005;THETA=0.0145;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31222032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0292;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31222034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0108;AVGPOST=0.9973;RSQ=0.9068;ERATE=0.0003;THETA=0.0161;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31222068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7289;ERATE=0.0005;THETA=0.0314;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31222098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6835;ERATE=0.0004;THETA=0.0151;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31222100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0151;AVGPOST=0.9953;RSQ=0.8696;ERATE=0.0004;THETA=0.0191;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31222121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.773;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8224;ERATE=0.0004;THETA=0.0239;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31222138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0144;AVGPOST=0.9967;RSQ=0.9016;ERATE=0.0009;THETA=0.0120;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31222161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0162;AVGPOST=0.9946;RSQ=0.8753;ERATE=0.0006;THETA=0.0232;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31222170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.833;LDAF=0.1526;AVGPOST=0.9441;RSQ=0.8386;ERATE=0.0033;THETA=0.0271;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 31222192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5995;ERATE=0.0004;THETA=0.0222;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31222196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6607;ERATE=0.0005;THETA=0.0333;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31222316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.863;LDAF=0.4456;AVGPOST=0.9158;RSQ=0.8800;ERATE=0.0249;THETA=0.0271;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 31222317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.854;LDAF=0.0851;AVGPOST=0.9734;RSQ=0.8626;ERATE=0.0041;THETA=0.0606;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 31222327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0005;THETA=0.0299;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31222491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.655;LDAF=0.2948;AVGPOST=0.8590;RSQ=0.7346;ERATE=0.0243;THETA=0.0244;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 31222522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.819;LDAF=0.0112;AVGPOST=0.9966;RSQ=0.8778;ERATE=0.0006;THETA=0.0575;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31222529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.803;LDAF=0.0793;AVGPOST=0.9649;RSQ=0.8163;ERATE=0.0105;THETA=0.0289;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 31222592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0162;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31222625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0250;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31222629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.878;LDAF=0.0684;AVGPOST=0.9791;RSQ=0.8622;ERATE=0.0172;THETA=0.0296;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 31222758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.792;LDAF=0.0112;AVGPOST=0.9954;RSQ=0.8372;ERATE=0.0013;THETA=0.0201;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31222774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4554;ERATE=0.0004;THETA=0.0226;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31222857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.925;LDAF=0.1061;AVGPOST=0.9820;RSQ=0.9441;ERATE=0.0005;THETA=0.0208;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 31222858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7503;ERATE=0.0005;THETA=0.0143;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31222867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0277;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31222918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6894;ERATE=0.0004;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31222989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7753;ERATE=0.0008;THETA=0.0144;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31223004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0219;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9078;ERATE=0.0004;THETA=0.0180;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31223024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7631;ERATE=0.0010;THETA=0.0130;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31223157 . A AG 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0180;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7066;ERATE=0.0006;THETA=0.0275;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31223260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0182;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.809;LDAF=0.0189;AVGPOST=0.9938;RSQ=0.8588;ERATE=0.0010;THETA=0.0185;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31223311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31223350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6423;ERATE=0.0026;THETA=0.0197;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31223351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.935;LDAF=0.1870;AVGPOST=0.9701;RSQ=0.9425;ERATE=0.0025;THETA=0.0059;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 31223356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0004;THETA=0.0138;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31223358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31223375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0113;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31223385 . TG T 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0270;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.0697;AVGPOST=0.9884;RSQ=0.9437;ERATE=0.0011;THETA=0.0062;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 31223394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0174;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9219;ERATE=0.0003;THETA=0.0067;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31223449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.928;LDAF=0.0220;AVGPOST=0.9959;RSQ=0.9315;ERATE=0.0004;THETA=0.0402;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31223486 . AC A 33 PASS INDEL;BAVGPOST=0.947;BRSQ=0.039;LDAF=0.0194;AVGPOST=0.9657;RSQ=0.1988;ERATE=0.0012;THETA=0.0223;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31223587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.924;LDAF=0.0244;AVGPOST=0.9975;RSQ=0.9585;ERATE=0.0006;THETA=0.0232;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31223632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0167;AVGPOST=0.9961;RSQ=0.9231;ERATE=0.0006;THETA=0.0105;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31223657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.841;LDAF=0.2231;AVGPOST=0.9193;RSQ=0.8387;ERATE=0.0023;THETA=0.0061;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 31223704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5638;ERATE=0.0006;THETA=0.0179;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31223718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4029;ERATE=0.0005;THETA=0.0202;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0216;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4905;ERATE=0.0003;THETA=0.0175;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31223941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0140;AVGPOST=0.9963;RSQ=0.8935;ERATE=0.0004;THETA=0.0059;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31224000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.961;LDAF=0.3510;AVGPOST=0.9612;RSQ=0.9390;ERATE=0.0017;THETA=0.0037;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 31224072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0230;AVGPOST=0.9985;RSQ=0.9757;ERATE=0.0004;THETA=0.0072;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31224079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0152;AVGPOST=0.9975;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31224166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4327;ERATE=0.0010;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31224193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3082;AVGPOST=0.9857;RSQ=0.9763;ERATE=0.0008;THETA=0.0016;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 31224229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31224318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31224396 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0238;AVGPOST=0.9956;RSQ=0.9300;ERATE=0.0004;THETA=0.0027;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31224536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3294;AVGPOST=0.9819;RSQ=0.9679;ERATE=0.0011;THETA=0.0004;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 31224585 rs35757328 C CA 11508 PASS INDEL;BAVGPOST=0.954;BRSQ=0.904;LDAF=0.2814;AVGPOST=0.9543;RSQ=0.9163;ERATE=0.0049;THETA=0.0006;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 31224593 . A AG 648 PASS INDEL;BAVGPOST=0.859;BRSQ=0.504;LDAF=0.1521;AVGPOST=0.8565;RSQ=0.6047;ERATE=0.0114;THETA=0.0022;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31224843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31224845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0266;AVGPOST=0.9976;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31224998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9565;ERATE=0.0003;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31225053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0046;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31225218 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9595;ERATE=0.0005;THETA=0.0043;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31225249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31225271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0285;AVGPOST=0.9975;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31225301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0441;AVGPOST=0.9987;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31225341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31225408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8301;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31225648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0507;AVGPOST=0.9981;RSQ=0.9856;ERATE=0.0005;THETA=0.0007;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 31225678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1856;AVGPOST=0.9905;RSQ=0.9775;ERATE=0.0007;THETA=0.0006;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 31225684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0276;AVGPOST=0.9991;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31225712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6158;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31225722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.908;LDAF=0.5180;AVGPOST=0.9538;RSQ=0.9323;ERATE=0.0013;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 31225734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0084;AVGPOST=0.9980;RSQ=0.8898;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31225875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.502;LDAF=0.0045;AVGPOST=0.9961;RSQ=0.6453;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31225921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.730;LDAF=0.0617;AVGPOST=0.9387;RSQ=0.5782;ERATE=0.0095;THETA=0.0010;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 31225937 . T TC 18 PASS INDEL;BAVGPOST=0.994;BRSQ=0.273;LDAF=0.0085;AVGPOST=0.9878;RSQ=0.3892;ERATE=0.0013;THETA=0.0042;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31225999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226059 . TA T 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3850;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6326;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31226160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7338;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31226256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9676;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31226259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9427;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31226308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6206;AVGPOST=0.9962;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 31226375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6205;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0004;THETA=0.0032;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 31226381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9797;ERATE=0.0003;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31226586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31226619 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31226925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9601;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31226927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31226947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7771;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31226948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9770;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31226988 . TG T 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4903;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31227027 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1873;AVGPOST=0.9968;RSQ=0.9920;ERATE=0.0011;THETA=0.0004;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 31227107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.6748;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31227121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.7935;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31227131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5898;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31227133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31227255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1824;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31227372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31227441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6044;AVGPOST=0.9883;RSQ=0.9816;ERATE=0.0031;THETA=0.0004;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 31227466 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.6337;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31227478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31227742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4043;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31227842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31227851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8652;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31227938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31228040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31228047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9709;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31228162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31228198 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1830;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31228361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0440;AVGPOST=0.9982;RSQ=0.9842;ERATE=0.0005;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31228504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7702;ERATE=0.0009;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31228646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.906;LDAF=0.0246;AVGPOST=0.9947;RSQ=0.9155;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31228710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0303;AVGPOST=0.9983;RSQ=0.9805;ERATE=0.0004;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31228711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31228778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0843;AVGPOST=0.9947;RSQ=0.9743;ERATE=0.0018;THETA=0.0039;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 31228989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31228999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31229075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2487;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 31229120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31229123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31229127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7657;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31229259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31229516 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0122;AVGPOST=0.9966;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31229569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31229883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7251;AVGPOST=0.9945;RSQ=0.9906;ERATE=0.0006;THETA=0.0005;AC=1584;AN=2184 GT:DS:GL:BD 0.72527474 1
1 31230002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31230007 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1834;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 31230010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2244;AVGPOST=0.9875;RSQ=0.9766;ERATE=0.0004;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 31230025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31230099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1834;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 31230126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6958;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0006;THETA=0.0017;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 31230158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31230195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6970;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 31230304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31230366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31230480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31230532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31230540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31230583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31230668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2588;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0021;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 31230738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8530;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31231126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2841;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 31231158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31231170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31231254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5864;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 31231333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5434;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 31231370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31231385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31231386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5432;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 31231438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7789;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31231680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2593;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0014;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 31231686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31231730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31231737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31231767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31231870 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0107;AVGPOST=0.9979;RSQ=0.9248;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31232059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31232076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31232183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6176;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31232202 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7247;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31232216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7459;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31232276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0737;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 31232359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0229;AVGPOST=0.9941;RSQ=0.9015;ERATE=0.0004;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31232496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9713;ERATE=0.0004;THETA=0.0043;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31232662 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6454;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31232775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6220;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31232880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31232926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6335;AVGPOST=0.9948;RSQ=0.9918;ERATE=0.0006;THETA=0.0012;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 31233046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9408;ERATE=0.0003;THETA=0.0043;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31233132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7072;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31233238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6450;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31233279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31233403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6831;AVGPOST=0.9907;RSQ=0.9843;ERATE=0.0017;THETA=0.0042;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 31233480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6963;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 31233504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.505;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31233547 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0072;AVGPOST=0.9947;RSQ=0.6973;ERATE=0.0013;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31233597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31233743 . TC T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4831;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31233802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8630;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31233815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31233882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6061;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31233919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0068;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31233962 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8266;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31234304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0155;AVGPOST=0.9941;RSQ=0.8387;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31234319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31234345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31234356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31234438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9169;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31234769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31234873 . GA G 1825 PASS INDEL;BAVGPOST=0.989;BRSQ=0.773;LDAF=0.0210;AVGPOST=0.9857;RSQ=0.7389;ERATE=0.0003;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31234888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31234919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31234931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5087;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31234958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0448;AVGPOST=0.9981;RSQ=0.9826;ERATE=0.0006;THETA=0.0032;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 31234971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5768;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31235046 . GC G 735 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0176;AVGPOST=0.9951;RSQ=0.8774;ERATE=0.0010;THETA=0.0019;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31235094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.960;LDAF=0.0579;AVGPOST=0.9956;RSQ=0.9714;ERATE=0.0003;THETA=0.0006;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31235121 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.716;LDAF=0.0252;AVGPOST=0.9804;RSQ=0.7001;ERATE=0.0022;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31235128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0450;AVGPOST=0.9954;RSQ=0.9588;ERATE=0.0005;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 31235311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0274;AVGPOST=0.9987;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31235453 . C CA 6661 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0434;AVGPOST=0.9990;RSQ=0.9893;ERATE=0.0005;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 31235524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9390;ERATE=0.0003;THETA=0.0041;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31235835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9228;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31235936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6699;AVGPOST=0.9960;RSQ=0.9931;ERATE=0.0006;THETA=0.0005;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 31235991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31236084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5604;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31236102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31236134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31236175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31236225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5142;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31236579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6603;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31236618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31236665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0462;AVGPOST=0.9988;RSQ=0.9878;ERATE=0.0004;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31237014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7944;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31237019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31237104 . AC A 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7979;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31237122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6811;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0005;THETA=0.0011;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 31237280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5105;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31237397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0098;AVGPOST=0.9987;RSQ=0.9480;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31237463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8038;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31237506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5281;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31237510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0320;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31237523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0121;AVGPOST=0.9962;RSQ=0.8733;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31237577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8643;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31237614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.676;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7541;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31237734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31237829 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.8221;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31237959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8368;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31237987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6435;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31238055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4680;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5127;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31238104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31238357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8367;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31238460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7661;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31238496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0426;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31238528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31238552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31238706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6796;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0140;AVGPOST=0.9989;RSQ=0.9653;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31238824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6918;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31238909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31238917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31239091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.593;LDAF=0.0008;AVGPOST=0.9984;RSQ=0.2042;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31239154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7645;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31239225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31239260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31239262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2178;AVGPOST=0.9935;RSQ=0.9871;ERATE=0.0003;THETA=0.0021;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 31239297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31239298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0115;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31239413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31239668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31239747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8924;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31239829 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6564;ERATE=0.0007;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31239947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31239966 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7757;ERATE=0.0003;THETA=0.0065;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31240050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7762;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31240146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31240147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31240163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31240222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31240379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31240480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0943;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 31240482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31240499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0569;AVGPOST=0.9977;RSQ=0.9855;ERATE=0.0003;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 31240531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31240623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0164;AVGPOST=0.9939;RSQ=0.8429;ERATE=0.0010;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31240685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4532;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31240739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.6838;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31240800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.645;LDAF=0.0241;AVGPOST=0.9859;RSQ=0.7612;ERATE=0.0009;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31240801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0174;AVGPOST=0.9952;RSQ=0.8829;ERATE=0.0012;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31240802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3420;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31240938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7023;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31241026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7546;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31241154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7167;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31241168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31241258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31241295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31241312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1983;AVGPOST=0.9916;RSQ=0.9821;ERATE=0.0023;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 31241391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31241446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9085;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31241573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8155;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31241610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31241777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2459;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 31241886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8424;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31241974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31242040 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9741;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31242151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8983;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31242272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0154;AVGPOST=0.9985;RSQ=0.9646;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31242375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0180;AVGPOST=0.9955;RSQ=0.8952;ERATE=0.0006;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31242508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31242612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31242742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0155;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31242885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8526;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31242948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4954;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31243062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2430;AVGPOST=0.9951;RSQ=0.9905;ERATE=0.0005;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 31243211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0212;AVGPOST=0.9988;RSQ=0.9783;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31243216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4996;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31243219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7148;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31243252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7309;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31243284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4808;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4113;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31243410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0100;AVGPOST=0.9968;RSQ=0.8876;ERATE=0.0005;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31243414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3862;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2112;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 31243600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.5291;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31243618 . A AAAAC 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5574;ERATE=0.0005;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31243802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31243831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31243844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31243913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6783;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=1484;AN=2184 GT:DS:GL:BD 0.67948717 1
1 31244094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31244137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31244195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31244292 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31244441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31244607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.3669;AVGPOST=0.9862;RSQ=0.9789;ERATE=0.0009;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 31244670 rs59493736 C CT 5026 PASS INDEL;BAVGPOST=0.866;BRSQ=0.537;LDAF=0.1763;AVGPOST=0.8388;RSQ=0.6162;ERATE=0.0143;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 31244695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.788;BRSQ=0.677;LDAF=0.3441;AVGPOST=0.8482;RSQ=0.7852;ERATE=0.0012;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 31244701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.876;BRSQ=0.703;LDAF=0.2173;AVGPOST=0.8906;RSQ=0.7847;ERATE=0.0042;THETA=0.0002;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 31244702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.804;BRSQ=0.693;LDAF=0.3587;AVGPOST=0.8518;RSQ=0.7991;ERATE=0.0023;THETA=0.0012;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 31244716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.839;BRSQ=0.760;LDAF=0.5329;AVGPOST=0.9101;RSQ=0.8885;ERATE=0.0006;THETA=0.0005;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 31244734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.936;LDAF=0.6087;AVGPOST=0.9732;RSQ=0.9624;ERATE=0.0004;THETA=0.0006;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 31244744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.944;LDAF=0.6100;AVGPOST=0.9756;RSQ=0.9651;ERATE=0.0012;THETA=0.0003;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 31244926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4956;ERATE=0.0005;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31244970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7309;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31245089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7646;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31245275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6062;AVGPOST=0.9957;RSQ=0.9933;ERATE=0.0007;THETA=0.0013;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 31245450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31245456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31245569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7169;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31245650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9562;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31245716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31245760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31245764 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0488;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 31245882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2137;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 31245951 . GCT G 182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31246020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7777;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31246026 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.1005;AVGPOST=0.9966;RSQ=0.9865;ERATE=0.0004;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31246049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.956;LDAF=0.1000;AVGPOST=0.9942;RSQ=0.9768;ERATE=0.0005;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 31246257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.870;LDAF=0.0432;AVGPOST=0.9955;RSQ=0.9558;ERATE=0.0008;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31246289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.944;LDAF=0.0628;AVGPOST=0.9836;RSQ=0.8964;ERATE=0.0056;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 31246311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31246337 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2441;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0006;THETA=0.0016;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 31246349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9044;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31246384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6022;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31246441 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9373;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31246442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9219;ERATE=0.0004;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31246443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7330;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31246499 . C CA 76 PASS INDEL;BAVGPOST=0.987;BRSQ=0.500;LDAF=0.0192;AVGPOST=0.9747;RSQ=0.4524;ERATE=0.0082;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31246509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31246658 . GA G 5666 PASS INDEL;BAVGPOST=0.817;BRSQ=0.719;LDAF=0.4586;AVGPOST=0.7913;RSQ=0.7226;ERATE=0.0379;THETA=0.0011;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 31246659 rs71897109 AC A 45068 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6660;AVGPOST=0.9947;RSQ=0.9909;ERATE=0.0014;THETA=0.0002;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 31246664 . CA C 2644 PASS INDEL;BAVGPOST=0.813;BRSQ=0.718;LDAF=0.4425;AVGPOST=0.7853;RSQ=0.7138;ERATE=0.0272;THETA=0.0004;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 31246754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31246789 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.865;LDAF=0.0302;AVGPOST=0.9868;RSQ=0.8244;ERATE=0.0010;THETA=0.0021;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31246810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4489;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 31246864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31246949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31246994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0607;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 31247012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.9023;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31247028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6591;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 31247089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6677;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31247140 . G GT 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31247222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7217;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31247233 . TG T 5174 PASS INDEL;BAVGPOST=0.981;BRSQ=0.750;LDAF=0.0366;AVGPOST=0.9892;RSQ=0.8828;ERATE=0.0005;THETA=0.0014;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31247236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4494;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 31247277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8308;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31247334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6655;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0011;THETA=0.0006;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 31247358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6673;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0011;THETA=0.0005;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31247499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0619;AVGPOST=0.9942;RSQ=0.9689;ERATE=0.0005;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 31247502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.877;LDAF=0.0329;AVGPOST=0.9960;RSQ=0.9564;ERATE=0.0006;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31247504 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.507;LDAF=0.0066;AVGPOST=0.9960;RSQ=0.7283;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31247514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6674;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31247540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6664;AVGPOST=0.9949;RSQ=0.9914;ERATE=0.0011;THETA=0.0004;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31247674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6663;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0007;THETA=0.0005;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 31247693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0593;AVGPOST=0.9988;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 31247720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.789;LDAF=0.0100;AVGPOST=0.9938;RSQ=0.7936;ERATE=0.0006;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31247727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0427;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0004;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31247745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9611;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31247811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6675;AVGPOST=0.9943;RSQ=0.9900;ERATE=0.0013;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31247837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31247864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4916;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31247991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6652;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0006;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 31248076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5273;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31248146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0106;AVGPOST=0.9980;RSQ=0.9245;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31248289 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6675;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31248378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31248428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31248430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31248432 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6674;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0008;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31248435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6674;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 31248471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4792;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31248474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7964;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31248500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7729;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31248562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4482;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 31248580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31248639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31248666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4924;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31248708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7216;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31248716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31248725 . AC A 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6441;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31248919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2039;AVGPOST=0.9956;RSQ=0.9890;ERATE=0.0006;THETA=0.0007;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 31248956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31249012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5998;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31249049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.949;LDAF=0.5779;AVGPOST=0.9589;RSQ=0.9389;ERATE=0.0116;THETA=0.0005;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 31249139 . GAAA G 27 PASS INDEL;BAVGPOST=0.992;BRSQ=0.331;LDAF=0.0304;AVGPOST=0.9536;RSQ=0.3531;ERATE=0.0051;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31249144 . GAAA G 12211 PASS INDEL;BAVGPOST=0.803;BRSQ=0.156;LDAF=0.8236;AVGPOST=0.7474;RSQ=0.2824;ERATE=0.0271;THETA=0.0007;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 31249149 . GAAA G 104 PASS INDEL;BAVGPOST=0.986;BRSQ=0.282;LDAF=0.0192;AVGPOST=0.9765;RSQ=0.4968;ERATE=0.0015;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31249172 . AGC A 948 PASS INDEL;BAVGPOST=0.857;BRSQ=0.236;LDAF=0.1738;AVGPOST=0.7973;RSQ=0.4430;ERATE=0.0209;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31249173 rs34236363 GC G 75 PASS INDEL;BAVGPOST=0.889;BRSQ=0.159;LDAF=0.0981;AVGPOST=0.8545;RSQ=0.3572;ERATE=0.0117;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31249174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.764;BRSQ=0.392;LDAF=0.2946;AVGPOST=0.7645;RSQ=0.5645;ERATE=0.0549;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 31249189 rs35292863 AGG A 1093 PASS INDEL;BAVGPOST=0.933;BRSQ=0.506;LDAF=0.1138;AVGPOST=0.8996;RSQ=0.6668;ERATE=0.0043;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 31249218 . A AGG 1538 PASS INDEL;BAVGPOST=0.955;BRSQ=0.512;LDAF=0.0977;AVGPOST=0.8777;RSQ=0.4255;ERATE=0.0160;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 31249223 . A AGG 1228 PASS INDEL;BAVGPOST=0.981;BRSQ=0.645;LDAF=0.0554;AVGPOST=0.9383;RSQ=0.5111;ERATE=0.0066;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31249227 . A AAG 2169 PASS INDEL;BAVGPOST=0.936;BRSQ=0.583;LDAF=0.1231;AVGPOST=0.8606;RSQ=0.4818;ERATE=0.0133;THETA=0.0006;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 31249250 . G GA 1742 PASS INDEL;BAVGPOST=0.846;BRSQ=0.419;LDAF=0.1985;AVGPOST=0.8197;RSQ=0.5202;ERATE=0.0451;THETA=0.0006;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 31249258 rs34776061 AAG A 11489 PASS INDEL;BAVGPOST=0.797;BRSQ=0.632;LDAF=0.3998;AVGPOST=0.7841;RSQ=0.6593;ERATE=0.0524;THETA=0.0004;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 31249307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.545;LDAF=0.0036;AVGPOST=0.9953;RSQ=0.4933;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31249361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.9969;AVGPOST=0.9957;RSQ=0.4326;ERATE=0.0004;THETA=0.0005;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 31249364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0439;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0006;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 31249365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8130;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31249379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0169;AVGPOST=0.9976;RSQ=0.9428;ERATE=0.0006;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31249452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8187;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31249480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8654;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31249528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6053;AVGPOST=0.9944;RSQ=0.9921;ERATE=0.0006;THETA=0.0003;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 31249555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7794;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31249573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0430;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 31249574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0583;AVGPOST=0.9980;RSQ=0.9872;ERATE=0.0004;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31249642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6285;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31249881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7261;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31250187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.822;LDAF=0.0210;AVGPOST=0.9927;RSQ=0.8669;ERATE=0.0004;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31250201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6131;ERATE=0.0005;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31250212 . G GT 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5262;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31250370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9990;RSQ=0.9680;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31250373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4457;AVGPOST=0.9961;RSQ=0.9939;ERATE=0.0006;THETA=0.0012;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 31250409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9736;ERATE=0.0003;THETA=0.0022;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31250456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6962;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31250491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31250506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.5466;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31250525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0056;AVGPOST=0.9963;RSQ=0.7422;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31250586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4328;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31250587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6720;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31250591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.935;LDAF=0.1836;AVGPOST=0.9866;RSQ=0.9681;ERATE=0.0005;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 31250653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.763;LDAF=0.0095;AVGPOST=0.9978;RSQ=0.9024;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31250683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9015;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31250957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6667;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31251051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6623;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0008;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 31251131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0699;AVGPOST=0.9974;RSQ=0.9889;ERATE=0.0004;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 31251264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0571;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31251274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31251304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31251308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31251393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8405;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31251524 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5509;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31251540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0462;AVGPOST=0.9983;RSQ=0.9869;ERATE=0.0003;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31251637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31251698 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2045;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0001;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 31251722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7663;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31251723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9164;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31252039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31252044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7621;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31252078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31252114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31252206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6610;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 31252270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0440;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31252312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31252386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7377;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31252583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31252616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0152;AVGPOST=0.9976;RSQ=0.9376;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31252854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0060;AVGPOST=0.9971;RSQ=0.7933;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31252900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0441;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31252932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0458;AVGPOST=0.9970;RSQ=0.9743;ERATE=0.0005;THETA=0.0043;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 31252972 . AC A 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7852;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31253133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5012;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7938;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31253553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31253554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9570;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31253737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7810;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31253779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0340;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31253829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0439;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0019;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31253889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31253957 rs71028720 G GTCT 9545 PASS INDEL;BAVGPOST=0.963;BRSQ=0.887;LDAF=0.1802;AVGPOST=0.9682;RSQ=0.9257;ERATE=0.0011;THETA=0.0005;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 31253965 rs35802769 C CT 2769 PASS INDEL;BAVGPOST=0.745;BRSQ=0.123;LDAF=0.8142;AVGPOST=0.7482;RSQ=0.3256;ERATE=0.0141;THETA=0.0002;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 31253967 rs71278782 T TC 7715 PASS INDEL;BAVGPOST=0.972;BRSQ=0.897;LDAF=0.1624;AVGPOST=0.9709;RSQ=0.9211;ERATE=0.0005;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 31253968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.895;LDAF=0.1614;AVGPOST=0.9715;RSQ=0.9202;ERATE=0.0008;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 31254019 rs71569942 C CTGGAG 15815 PASS INDEL;BAVGPOST=0.920;BRSQ=0.784;LDAF=0.1944;AVGPOST=0.9246;RSQ=0.8380;ERATE=0.0040;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 31254020 . T TGGAGA 7330 PASS INDEL;BAVGPOST=0.936;BRSQ=0.781;LDAF=0.1630;AVGPOST=0.9283;RSQ=0.8047;ERATE=0.0075;THETA=0.0012;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 31254094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6746;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31254218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2789;AVGPOST=0.9945;RSQ=0.9888;ERATE=0.0007;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 31254231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6618;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 31254258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2356;AVGPOST=0.9955;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 31254270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.4517;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31254273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2043;AVGPOST=0.9971;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 31254388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0163;AVGPOST=0.9984;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31254389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0233;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31254530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5309;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31254554 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5658;ERATE=0.0006;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31254579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0150;AVGPOST=0.9981;RSQ=0.9456;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31254585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1010;AVGPOST=0.9981;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31254716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6606;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 31254746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31254765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31254924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.7963;ERATE=0.0007;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31254934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9965;RSQ=0.9288;ERATE=0.0005;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31254955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0067;AVGPOST=0.9950;RSQ=0.6872;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31254970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.744;LDAF=0.0210;AVGPOST=0.9850;RSQ=0.7075;ERATE=0.0010;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31254975 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.870;LDAF=0.0379;AVGPOST=0.9803;RSQ=0.8093;ERATE=0.0007;THETA=0.0019;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31255051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0150;AVGPOST=0.9993;RSQ=0.9815;ERATE=0.0006;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31255060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5368;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31255376 . TG T 2183 PASS INDEL;BAVGPOST=0.976;BRSQ=0.710;LDAF=0.0376;AVGPOST=0.9848;RSQ=0.8597;ERATE=0.0009;THETA=0.0025;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31255398 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0072;AVGPOST=0.9936;RSQ=0.6453;ERATE=0.0009;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31255399 rs113714151 GA G 2080 PASS INDEL;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0298;AVGPOST=0.9925;RSQ=0.8992;ERATE=0.0007;THETA=0.0019;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31255447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0229;AVGPOST=0.9977;RSQ=0.9662;ERATE=0.0004;THETA=0.0033;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31255606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31255616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6799;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31255634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2964;AVGPOST=0.9843;RSQ=0.9725;ERATE=0.0004;THETA=0.0041;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 31255677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6858;ERATE=0.0005;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31255862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31255881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4356;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31255905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.5707;AVGPOST=0.9668;RSQ=0.9508;ERATE=0.0009;THETA=0.0194;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 31255923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0100;AVGPOST=0.9952;RSQ=0.8006;ERATE=0.0019;THETA=0.0138;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31255961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4198;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0122;AVGPOST=0.9970;RSQ=0.9018;ERATE=0.0005;THETA=0.0024;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31256212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6521;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31256360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8320;ERATE=0.0004;THETA=0.0154;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31256394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4995;ERATE=0.0003;THETA=0.0242;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0200;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31256586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0288;AVGPOST=0.9947;RSQ=0.9244;ERATE=0.0003;THETA=0.0294;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31256739 . T TA 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.3814;ERATE=0.0007;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31256819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0122;AVGPOST=0.9966;RSQ=0.8995;ERATE=0.0004;THETA=0.0132;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31256923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0070;AVGPOST=0.9984;RSQ=0.8989;ERATE=0.0003;THETA=0.0109;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31257043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4367;ERATE=0.0004;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31257165 . GC G 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8059;ERATE=0.0004;THETA=0.0100;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31257166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.5140;ERATE=0.0007;THETA=0.0236;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31257172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.652;LDAF=0.0064;AVGPOST=0.9940;RSQ=0.6144;ERATE=0.0011;THETA=0.0178;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31257173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6657;ERATE=0.0003;THETA=0.0060;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31257262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0004;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31257416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8204;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31257428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0004;THETA=0.0054;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31257535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0057;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31257572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.652;LDAF=0.0039;AVGPOST=0.9954;RSQ=0.5117;ERATE=0.0008;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31257573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4927;ERATE=0.0004;THETA=0.0282;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31257599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8233;ERATE=0.0003;THETA=0.0139;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31257670 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.951;LDAF=0.3891;AVGPOST=0.9497;RSQ=0.9224;ERATE=0.0009;THETA=0.0013;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 31257693 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4699;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31257805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.890;LDAF=0.9114;AVGPOST=0.9718;RSQ=0.8700;ERATE=0.0005;THETA=0.0003;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 31257815 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5101;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31257827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6534;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31257994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8635;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31258059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31258088 . G GA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31258095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7335;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31258120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5916;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31258180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6240;ERATE=0.0006;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31258203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.8876;ERATE=0.0004;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31258259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.940;LDAF=0.2722;AVGPOST=0.9668;RSQ=0.9381;ERATE=0.0021;THETA=0.0014;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 31258328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.949;LDAF=0.0376;AVGPOST=0.9949;RSQ=0.9499;ERATE=0.0003;THETA=0.0026;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31258427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5458;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31258427 . CG C 7499 PASS INDEL;BAVGPOST=0.986;BRSQ=0.920;LDAF=0.0819;AVGPOST=0.9819;RSQ=0.9139;ERATE=0.0006;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 31258533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8252;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31258545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31258572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31258698 rs59538733 GC G 21385 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2389;AVGPOST=0.9867;RSQ=0.9750;ERATE=0.0005;THETA=0.0013;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 31258724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.2388;AVGPOST=0.9870;RSQ=0.9758;ERATE=0.0005;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 31258787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31258821 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31258827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.940;LDAF=0.4916;AVGPOST=0.9559;RSQ=0.9368;ERATE=0.0010;THETA=0.0130;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 31258853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.6045;ERATE=0.0005;THETA=0.0114;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31258973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0179;AVGPOST=0.9952;RSQ=0.9021;ERATE=0.0003;THETA=0.0049;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31259050 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5389;ERATE=0.0004;THETA=0.0162;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31259154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2598;ERATE=0.0003;THETA=0.0093;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31259195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8827;ERATE=0.0003;THETA=0.0133;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31259325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9068;ERATE=0.0003;THETA=0.0077;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31259359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0063;AVGPOST=0.9953;RSQ=0.6943;ERATE=0.0007;THETA=0.0176;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31259494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31259506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.940;LDAF=0.9203;AVGPOST=0.9843;RSQ=0.9188;ERATE=0.0003;THETA=0.0061;AC=2018;AN=2184 GT:DS:GL:BD 0.92399269 1
1 31259534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8216;ERATE=0.0014;THETA=0.0183;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31259636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.540;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5859;ERATE=0.0004;THETA=0.0116;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31259875 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.699;LDAF=0.0095;AVGPOST=0.9911;RSQ=0.6364;ERATE=0.0004;THETA=0.0229;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31259890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.540;LDAF=0.0078;AVGPOST=0.9920;RSQ=0.5997;ERATE=0.0007;THETA=0.0165;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31259911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0071;AVGPOST=0.9962;RSQ=0.7916;ERATE=0.0004;THETA=0.0178;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31259963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.799;LDAF=0.1042;AVGPOST=0.9391;RSQ=0.7435;ERATE=0.0019;THETA=0.0103;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 31259977 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.853;LDAF=0.0620;AVGPOST=0.9754;RSQ=0.8631;ERATE=0.0015;THETA=0.0252;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31259998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.723;LDAF=0.0130;AVGPOST=0.9896;RSQ=0.6840;ERATE=0.0021;THETA=0.0133;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31260060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.830;LDAF=0.5732;AVGPOST=0.8464;RSQ=0.7668;ERATE=0.0107;THETA=0.0037;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 31260190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9439;ERATE=0.0003;THETA=0.0155;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31260254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0090;AVGPOST=0.9975;RSQ=0.8913;ERATE=0.0004;THETA=0.0069;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31260293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.960;LDAF=0.1799;AVGPOST=0.9767;RSQ=0.9443;ERATE=0.0009;THETA=0.0038;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 31260391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9745;ERATE=0.0003;THETA=0.0042;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31260468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0583;AVGPOST=0.9931;RSQ=0.9550;ERATE=0.0004;THETA=0.0045;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31260471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8608;ERATE=0.0005;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31260480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31260493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7877;ERATE=0.0005;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31260501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0622;AVGPOST=0.9957;RSQ=0.9789;ERATE=0.0004;THETA=0.0009;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31260572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0005;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31260625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0110;AVGPOST=0.9983;RSQ=0.9291;ERATE=0.0005;THETA=0.0025;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31260641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0316;AVGPOST=0.9971;RSQ=0.9638;ERATE=0.0003;THETA=0.0045;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31260665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8169;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31260702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8915;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31260738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7858;ERATE=0.0008;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31260739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6286;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31260814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9994;RSQ=0.9830;ERATE=0.0003;THETA=0.0053;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31260898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7161;ERATE=0.0003;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31261012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31261026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31261037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6386;AVGPOST=0.9873;RSQ=0.9806;ERATE=0.0006;THETA=0.0007;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 31261082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31261268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9662;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31261291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1122;AVGPOST=0.9973;RSQ=0.9899;ERATE=0.0005;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31261304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31261518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31261554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31261609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9370;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31261623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7965;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31262050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0193;AVGPOST=0.9972;RSQ=0.9470;ERATE=0.0003;THETA=0.0043;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31262095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31262147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9147;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31262163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31262362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31262374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31262499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4700;AVGPOST=0.9852;RSQ=0.9791;ERATE=0.0009;THETA=0.0005;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 31262647 rs78578255 TC T 5041 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0341;AVGPOST=0.9951;RSQ=0.9449;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31262683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31262775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1448;AVGPOST=0.9967;RSQ=0.9913;ERATE=0.0003;THETA=0.0012;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 31262823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9640;ERATE=0.0003;THETA=0.0046;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31263325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31263360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.917;LDAF=0.7295;AVGPOST=0.9633;RSQ=0.9375;ERATE=0.0011;THETA=0.0005;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 31263363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.918;LDAF=0.7240;AVGPOST=0.9606;RSQ=0.9336;ERATE=0.0014;THETA=0.0003;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 31263372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.950;LDAF=0.1393;AVGPOST=0.9814;RSQ=0.9475;ERATE=0.0023;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 31263402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0662;AVGPOST=0.9953;RSQ=0.9754;ERATE=0.0004;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 31263425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.933;LDAF=0.7317;AVGPOST=0.9682;RSQ=0.9438;ERATE=0.0033;THETA=0.0003;AC=1607;AN=2184 GT:DS:GL:BD 0.73580587 1
1 31263446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6574;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31263510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5377;AVGPOST=0.9918;RSQ=0.9886;ERATE=0.0005;THETA=0.0007;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 31263518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31263625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31263633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9257;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31263670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31263782 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31263795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31263833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31263883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8647;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0263;AVGPOST=0.9949;RSQ=0.9239;ERATE=0.0004;THETA=0.0012;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 31264224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8073;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8873;ERATE=0.0005;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31264256 . AAGAG A 275 PASS INDEL;BAVGPOST=0.997;BRSQ=0.600;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6185;ERATE=0.0008;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31264264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0004;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9218;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31264295 . AAG A 83 PASS INDEL;BAVGPOST=0.990;BRSQ=0.596;LDAF=0.0234;AVGPOST=0.9766;RSQ=0.5975;ERATE=0.0070;THETA=0.0026;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31264334 . GAA G 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6688;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264335 . AAG A 118 PASS INDEL;BAVGPOST=0.984;BRSQ=0.607;LDAF=0.0354;AVGPOST=0.9587;RSQ=0.5074;ERATE=0.0151;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31264426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5064;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31264455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3575;AVGPOST=0.9854;RSQ=0.9784;ERATE=0.0032;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 31264468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1228;AVGPOST=0.9935;RSQ=0.9766;ERATE=0.0017;THETA=0.0012;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 31264515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0185;AVGPOST=0.9975;RSQ=0.9467;ERATE=0.0004;THETA=0.0021;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31264590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0378;AVGPOST=0.9982;RSQ=0.9814;ERATE=0.0005;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31264600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31264763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9429;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31264888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31264928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31264933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9421;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31264936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0013;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31264968 . CAG C 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4311;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31264978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3515;AVGPOST=0.9931;RSQ=0.9886;ERATE=0.0008;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 31265030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8853;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31265031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9773;ERATE=0.0003;THETA=0.0032;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31265050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.6949;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31265102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.8742;ERATE=0.0009;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31265134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0003;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31265189 . TAA T 5168 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0334;AVGPOST=0.9978;RSQ=0.9775;ERATE=0.0006;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 31265215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1164;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 31265240 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9661;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31265296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9315;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31265331 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31265388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8279;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31265445 rs71569943 A AT 7244 PASS INDEL;BAVGPOST=0.986;BRSQ=0.954;LDAF=0.1554;AVGPOST=0.9654;RSQ=0.8972;ERATE=0.0083;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 31265449 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31265490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8285;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31265525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4966;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9205;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31265595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5767;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1086;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 31265843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1086;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 31265844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31265985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7992;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31266006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4467;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31266029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6140;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31266036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31266070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31266076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7940;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31266254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0267;AVGPOST=0.9978;RSQ=0.9690;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31266267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0202;AVGPOST=0.9983;RSQ=0.9660;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31266268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6282;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31266417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9983;RSQ=0.9860;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31266418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9320;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31266526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31266540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=0.9987;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 31266630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31266717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0116;AVGPOST=0.9979;RSQ=0.9274;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31266734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5077;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31266769 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31266779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6957;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31266945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1160;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 31267076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267090 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9661;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31267154 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31267225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31267240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31267335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1660;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 31267470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1171;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31267517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31267541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31267545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31267546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31267651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.932;LDAF=0.0304;AVGPOST=0.9938;RSQ=0.9247;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31267862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31267958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31268009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9553;ERATE=0.0003;THETA=0.0043;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31268040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5908;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31268280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31268302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8728;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31268327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31268350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1372;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31268374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31268508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.1836;AVGPOST=0.9926;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31268514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.903;LDAF=0.0497;AVGPOST=0.9891;RSQ=0.9218;ERATE=0.0004;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 31268520 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.903;LDAF=0.0479;AVGPOST=0.9909;RSQ=0.9310;ERATE=0.0005;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31268545 . C CA 33 PASS INDEL;BAVGPOST=0.996;BRSQ=0.535;LDAF=0.0050;AVGPOST=0.9953;RSQ=0.6144;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31268574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.879;LDAF=0.0484;AVGPOST=0.9850;RSQ=0.8913;ERATE=0.0024;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31268580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.811;LDAF=0.0669;AVGPOST=0.9648;RSQ=0.7990;ERATE=0.0098;THETA=0.0007;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31268641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5949;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31268699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7478;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31268728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1098;AVGPOST=0.9968;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 31268784 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31268896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31269194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6669;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31269260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.675;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6627;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31269311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0121;AVGPOST=0.9938;RSQ=0.8215;ERATE=0.0009;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31269457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0250;AVGPOST=0.9978;RSQ=0.9621;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 31269495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8165;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31269537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.875;LDAF=0.0572;AVGPOST=0.9907;RSQ=0.9377;ERATE=0.0006;THETA=0.0012;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31269545 . G GA 424 PASS INDEL;BAVGPOST=0.959;BRSQ=0.522;LDAF=0.0718;AVGPOST=0.9214;RSQ=0.5322;ERATE=0.0173;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 31269548 . AG A 7973 PASS INDEL;BAVGPOST=0.942;BRSQ=0.893;LDAF=0.3553;AVGPOST=0.9538;RSQ=0.9299;ERATE=0.0057;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 31269555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8297;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31269627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5595;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31269660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.519;LDAF=0.0108;AVGPOST=0.9899;RSQ=0.6180;ERATE=0.0012;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31269681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.674;LDAF=0.0126;AVGPOST=0.9905;RSQ=0.7098;ERATE=0.0012;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31269727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0238;AVGPOST=0.9935;RSQ=0.9002;ERATE=0.0006;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31269773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.605;LDAF=0.0172;AVGPOST=0.9802;RSQ=0.5587;ERATE=0.0031;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31269774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9982;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31269856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0284;AVGPOST=0.9918;RSQ=0.8889;ERATE=0.0005;THETA=0.0023;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31269866 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1825;AVGPOST=0.9894;RSQ=0.9751;ERATE=0.0004;THETA=0.0006;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 31269910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.7665;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31270001 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7675;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31270090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7878;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31270161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31270290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3548;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31270291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0109;AVGPOST=0.9984;RSQ=0.9443;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31270365 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8859;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31270446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1141;AVGPOST=0.9926;RSQ=0.9761;ERATE=0.0006;THETA=0.0007;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 31270503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0064;AVGPOST=0.9965;RSQ=0.7768;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31270543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31270615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4407;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31270659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9386;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31270808 . CA C 1229 PASS INDEL;BAVGPOST=0.979;BRSQ=0.939;LDAF=0.1866;AVGPOST=0.9909;RSQ=0.9771;ERATE=0.0008;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 31270810 rs66836441 AC A 12261 PASS INDEL;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.1949;AVGPOST=0.9915;RSQ=0.9796;ERATE=0.0008;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31270921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8638;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31270954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0171;AVGPOST=0.9988;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31270995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31270996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31271101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9654;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31271103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1490;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 31271327 . A AC 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31271328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31271409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0374;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31271466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0028;AVGPOST=0.9952;RSQ=0.3317;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31271477 . GCCT G 311 PASS INDEL;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5692;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31271673 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31271717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31271730 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4193;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31271763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0353;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0008;THETA=0.0015;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31271902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31271921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9306;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31271960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31272051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3481;AVGPOST=0.9905;RSQ=0.9855;ERATE=0.0026;THETA=0.0002;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 31272160 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31272216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31272279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3679;AVGPOST=0.9908;RSQ=0.9855;ERATE=0.0019;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 31272283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0338;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31272413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1100;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31272450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1164;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 31272560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31272574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31272701 . GA G 11 PASS INDEL;BAVGPOST=0.995;BRSQ=0.420;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6920;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31272705 . AAAAG A 10982 PASS INDEL;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1407;AVGPOST=0.9933;RSQ=0.9804;ERATE=0.0010;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 31272732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0068;AVGPOST=0.9999;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31272751 . A AG 71 PASS INDEL;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0058;AVGPOST=0.9954;RSQ=0.6682;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31272752 . A AG 7813 PASS INDEL;BAVGPOST=0.939;BRSQ=0.766;LDAF=0.1723;AVGPOST=0.9023;RSQ=0.7218;ERATE=0.0282;THETA=0.0025;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 31272833 rs71028721 GAA G 23019 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3431;AVGPOST=0.9933;RSQ=0.9893;ERATE=0.0006;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 31272972 rs71028723 G GGAAAGAAAGAGAAA 89636 PASS INDEL;BAVGPOST=0.880;BRSQ=0.705;LDAF=0.7212;AVGPOST=0.8202;RSQ=0.6635;ERATE=0.0255;THETA=0.0029;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 31273018 . G GAGGA 4395 PASS INDEL;BAVGPOST=0.974;BRSQ=0.865;LDAF=0.0987;AVGPOST=0.9845;RSQ=0.9346;ERATE=0.0006;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 31273055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6677;ERATE=0.0011;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31273136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.960;LDAF=0.1078;AVGPOST=0.9957;RSQ=0.9837;ERATE=0.0003;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 31273198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0830;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0003;THETA=0.0008;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 31273388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8541;ERATE=0.0004;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31273400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31273401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0232;AVGPOST=0.9968;RSQ=0.9453;ERATE=0.0016;THETA=0.0081;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31273402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31273407 . TG T 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7923;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31273500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31273501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0120;AVGPOST=0.9976;RSQ=0.9269;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31273602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31273613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31273744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0251;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0003;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31273745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9530;ERATE=0.0015;THETA=0.0016;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31273756 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31273777 . TAC T 93 PASS INDEL;BAVGPOST=0.992;BRSQ=0.695;LDAF=0.0184;AVGPOST=0.9806;RSQ=0.5616;ERATE=0.0099;THETA=0.0062;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31273857 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8424;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31273996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9036;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31274023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31274051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31274118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9989;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 31274133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31274152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31274260 . GAC G 166 PASS INDEL;BAVGPOST=0.982;BRSQ=0.639;LDAF=0.0400;AVGPOST=0.9552;RSQ=0.5214;ERATE=0.0129;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31274317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.900;LDAF=0.8913;AVGPOST=0.9560;RSQ=0.8358;ERATE=0.0084;THETA=0.0002;AC=1977;AN=2184 GT:DS:GL:BD 0.90521979 1
1 31274484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.720;LDAF=0.0153;AVGPOST=0.9892;RSQ=0.7267;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31274539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9975;RSQ=0.9287;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31274562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7021;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31274704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31274795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7590;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31274914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5016;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31275310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5234;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.928;LDAF=0.0477;AVGPOST=0.9856;RSQ=0.8899;ERATE=0.0005;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 31275462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.625;LDAF=0.0107;AVGPOST=0.9888;RSQ=0.5788;ERATE=0.0023;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31275473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0121;AVGPOST=0.9913;RSQ=0.7335;ERATE=0.0007;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31275889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.804;LDAF=0.0108;AVGPOST=0.9941;RSQ=0.7889;ERATE=0.0004;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31275957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31275977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0118;AVGPOST=0.9927;RSQ=0.7658;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31276120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1160;AVGPOST=0.9963;RSQ=0.9855;ERATE=0.0004;THETA=0.0008;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 31276134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8152;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31276152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0582;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 31276194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6386;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31276275 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6805;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31276308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0875;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 31276324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31276394 . CCAAA C 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6308;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31276472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31276496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31276562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5455;AVGPOST=0.9942;RSQ=0.9916;ERATE=0.0007;THETA=0.0003;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 31276628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6567;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31276634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8887;ERATE=0.0012;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31276993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8983;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31277183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9180;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31277346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0716;AVGPOST=0.9967;RSQ=0.9779;ERATE=0.0004;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 31277404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0356;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31277468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4934;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277521 . TG T 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8317;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31277582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277621 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5354;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31277724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31277750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3375;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 31277796 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31277913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1021;AVGPOST=0.9978;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 31277936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31277974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0156;AVGPOST=0.9985;RSQ=0.9629;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31278219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.4442;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31278372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31278481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8384;AVGPOST=0.9971;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 31278563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6083;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7115;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31278675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31278825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31278870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7459;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31278897 rs72498306 T TCAAC 14132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0358;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31279003 . GC G 209 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.5909;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31279007 . AC A 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7023;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31279017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9713;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31279159 . GT G 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7177;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31279201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5854;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31279352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.908;LDAF=0.7475;AVGPOST=0.9782;RSQ=0.9576;ERATE=0.0006;THETA=0.0003;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 31279394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9007;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31279456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0322;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 31279485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31279506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9282;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31279522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31279600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9240;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31279759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7528;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31279805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31279829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6838;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31279963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31279979 . CG C 101 PASS INDEL;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0061;AVGPOST=0.9957;RSQ=0.7246;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31280008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31280045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0062;AVGPOST=0.9952;RSQ=0.7034;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31280257 . CCCG C 716 PASS INDEL;BAVGPOST=0.984;BRSQ=0.751;LDAF=0.0505;AVGPOST=0.9682;RSQ=0.7489;ERATE=0.0017;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31280262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.888;LDAF=0.1093;AVGPOST=0.9621;RSQ=0.8613;ERATE=0.0011;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 31280311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.903;LDAF=0.0262;AVGPOST=0.9841;RSQ=0.7622;ERATE=0.0013;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31281086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7882;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31281089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31281275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31281351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9575;ERATE=0.0003;THETA=0.0039;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31281385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6599;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31281395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31281711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0088;AVGPOST=0.9969;RSQ=0.8484;ERATE=0.0011;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31281767 . AAAAAAAAAAAG A 984 PASS INDEL;BAVGPOST=0.996;BRSQ=0.852;LDAF=0.0096;AVGPOST=0.9935;RSQ=0.7147;ERATE=0.0006;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31281849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31281900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6350;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31281921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31281964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8268;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31282091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7060;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31282144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31282154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31282181 rs67423118 CT C 142 PASS INDEL;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6125;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31282326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8369;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 31282519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0460;AVGPOST=0.9923;RSQ=0.9347;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 31282609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0056;AVGPOST=0.9982;RSQ=0.8733;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31282655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9626;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31282759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31282760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31282777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31282838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31282892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8386;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 31282899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31282906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31283037 . AG A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4852;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31283139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4876;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31283180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31283364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0161;AVGPOST=0.9987;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31283404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0186;AVGPOST=0.9992;RSQ=0.9789;ERATE=0.0003;THETA=0.0042;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31283493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4021;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31283525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7011;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31283600 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0020;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31283705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6256;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31283851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8328;AVGPOST=0.9977;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 31284029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31284090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31284243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0756;AVGPOST=0.9954;RSQ=0.9784;ERATE=0.0020;THETA=0.0088;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 31284348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0217;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0003;THETA=0.0015;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31284531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3702;ERATE=0.0005;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31284596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.1937;AVGPOST=0.9941;RSQ=0.9855;ERATE=0.0005;THETA=0.0030;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 31284672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.941;LDAF=0.0579;AVGPOST=0.9891;RSQ=0.9308;ERATE=0.0005;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31284679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7338;ERATE=0.0003;THETA=0.0085;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31284694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0701;AVGPOST=0.9956;RSQ=0.9771;ERATE=0.0007;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 31284738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0095;AVGPOST=0.9959;RSQ=0.8263;ERATE=0.0004;THETA=0.0082;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31284746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31284921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31284954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31285083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4812;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31285088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4827;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31285466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3776;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 31285547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31285654 . GAA G 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31285678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0937;AVGPOST=0.9981;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 31285977 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0963;AVGPOST=0.9981;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 31286001 . C CT 536 PASS INDEL;BAVGPOST=0.892;BRSQ=0.496;LDAF=0.0813;AVGPOST=0.9180;RSQ=0.6122;ERATE=0.0020;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 31286049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5430;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31286099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31286148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9954;RSQ=0.6190;ERATE=0.0010;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31286204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.692;LDAF=0.0087;AVGPOST=0.9973;RSQ=0.8704;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31286207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5978;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31286210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0057;AVGPOST=0.9916;RSQ=0.3852;ERATE=0.0014;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31286309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31286345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.1880;AVGPOST=0.9953;RSQ=0.9896;ERATE=0.0007;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 31286492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1909;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 31286629 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3723;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0005;THETA=0.0009;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 31286659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.8219;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31286738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31286796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3754;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 31286821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31286884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1935;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 31287029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3780;ERATE=0.0004;THETA=0.0001;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31287054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1946;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0006;THETA=0.0033;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 31287103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9992;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31287236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0164;AVGPOST=0.9972;RSQ=0.9333;ERATE=0.0010;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31287390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31287507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31287514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31287563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8634;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31287636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31287673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3053;AVGPOST=0.9884;RSQ=0.9815;ERATE=0.0047;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 31287688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7257;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31287742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31287831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1787;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 31287902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6029;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31287973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31288108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7710;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31288190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9999;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31288209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31288239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3800;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 31288293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9275;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31288332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31288343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0210;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0004;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31288406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8699;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31288563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31288594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31288599 . TAG T 442 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31288652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31288695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7340;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31288704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31288707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9259;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31288737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7501;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31288786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0928;AVGPOST=0.9966;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 31288980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9723;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31288981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31289078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0943;AVGPOST=0.9983;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 31289188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8700;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31289235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31289265 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0939;AVGPOST=0.9963;RSQ=0.9847;ERATE=0.0006;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 31289272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7936;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31289285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7822;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31289587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31289593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4752;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0004;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 31289667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31289677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6583;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31289759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7883;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31289842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8848;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31289919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6128;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0006;THETA=0.0002;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 31290036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31290056 . TC T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4982;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31290102 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31290110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31290147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0813;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 31290148 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31290250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.949;LDAF=0.3918;AVGPOST=0.9366;RSQ=0.9017;ERATE=0.0223;THETA=0.0002;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 31290265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.778;LDAF=0.0107;AVGPOST=0.9912;RSQ=0.6826;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31290266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7242;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31290280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2995;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 31290285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.630;LDAF=0.0287;AVGPOST=0.9695;RSQ=0.5895;ERATE=0.0099;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31290316 . TCA T 40 PASS INDEL;BAVGPOST=0.991;BRSQ=0.615;LDAF=0.0165;AVGPOST=0.9819;RSQ=0.5648;ERATE=0.0064;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31290388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31290444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31290452 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0269;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31290488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0004;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31290494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31290524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6719;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31290725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.910;LDAF=0.0520;AVGPOST=0.9870;RSQ=0.9136;ERATE=0.0012;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 31290813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31290817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31290840 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31290915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31290927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31291105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0947;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 31291148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31291189 . GA G 1181 PASS INDEL;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9082;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31291197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1839;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 31291198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31291273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31291302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31291348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7978;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0005;THETA=0.0002;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 31291365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31291476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9423;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31291499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9151;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31291503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1085;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 31291522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31291529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0205;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31291539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 31291565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31291577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7135;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31291701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31291853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31291884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7487;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31291928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6946;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31291983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8365;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31291987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.9198;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31292101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31292292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0163;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0020;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31292305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31292338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2283;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 31292406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0469;AVGPOST=0.9951;RSQ=0.9577;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31292455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0033;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31292552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5918;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31292568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9526;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31292608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0900;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 31292634 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0204;AVGPOST=0.9986;RSQ=0.9796;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31292641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1914;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0006;THETA=0.0012;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 31292684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.813;LDAF=0.9798;AVGPOST=0.9894;RSQ=0.8035;ERATE=0.0006;THETA=0.0004;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 31292768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31292823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0272;AVGPOST=0.9987;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31292900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0128;AVGPOST=0.9983;RSQ=0.9555;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31292940 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9592;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31293027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9499;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31293308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5320;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31293339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9031;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31293390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7412;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31293469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0263;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31293643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6694;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31293653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0043;AVGPOST=0.9961;RSQ=0.6654;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31293880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6985;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 31293886 . CG C 2881 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31293954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0362;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31293987 . GT G 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6386;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31294043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0120;AVGPOST=0.9974;RSQ=0.9116;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31294057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5597;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31294082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.839;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8248;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31294146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0257;AVGPOST=0.9974;RSQ=0.9638;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31294170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4287;AVGPOST=0.9943;RSQ=0.9912;ERATE=0.0010;THETA=0.0002;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 31294303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6379;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31294412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1845;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 31294572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0003;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31294746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31294767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7674;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0012;THETA=0.0002;AC=1674;AN=2184 GT:DS:GL:BD 0.76648355 1
1 31294774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 31294834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31294885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4251;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31294941 . C CTCA 31941 PASS INDEL;BAVGPOST=0.962;BRSQ=0.920;LDAF=0.7278;AVGPOST=0.9385;RSQ=0.8782;ERATE=0.0154;THETA=0.0003;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 31294942 . T TCCA 32258 PASS INDEL;BAVGPOST=0.959;BRSQ=0.915;LDAF=0.7184;AVGPOST=0.9220;RSQ=0.8470;ERATE=0.0235;THETA=0.0002;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 31294988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31295057 . CT C 2929 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0249;AVGPOST=0.9986;RSQ=0.9811;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31295117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0771;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 31295302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8016;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31295440 . TA T 12051 PASS INDEL;BAVGPOST=0.913;BRSQ=0.779;LDAF=0.2322;AVGPOST=0.8756;RSQ=0.7556;ERATE=0.0236;THETA=0.0007;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 31295443 . TTA T 18993 PASS INDEL;BAVGPOST=0.919;BRSQ=0.866;LDAF=0.5420;AVGPOST=0.9087;RSQ=0.8662;ERATE=0.0108;THETA=0.0004;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 31295444 rs78446373 TA T 27548 PASS INDEL;BAVGPOST=0.927;BRSQ=0.875;LDAF=0.5574;AVGPOST=0.9114;RSQ=0.8668;ERATE=0.0134;THETA=0.0011;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 31295485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0048;AVGPOST=0.9954;RSQ=0.6272;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31295546 . T TG 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0074;AVGPOST=0.9924;RSQ=0.5781;ERATE=0.0009;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31295660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1901;AVGPOST=0.9872;RSQ=0.9702;ERATE=0.0018;THETA=0.0024;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 31295718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.738;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.6918;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31295729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6763;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31295730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5425;AVGPOST=0.9950;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 31295904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7926;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 31295920 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31295985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31296012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31296070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31296085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31296093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31296153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3805;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 31296268 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31296349 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31296392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3026;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 31296585 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2043;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0005;THETA=0.0016;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 31296610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6623;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31296617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31296780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31296910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8355;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31297092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0262;AVGPOST=0.9987;RSQ=0.9816;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31297154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31297238 . AGAG A 1875 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9794;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31297301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4700;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31297337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6106;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31297379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0226;AVGPOST=0.9980;RSQ=0.9649;ERATE=0.0006;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31297433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5182;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31297519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7899;AVGPOST=0.9953;RSQ=0.9896;ERATE=0.0005;THETA=0.0002;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 31297664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8031;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31297746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3723;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 31298028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31298086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31298095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31298101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0319;AVGPOST=0.9980;RSQ=0.9720;ERATE=0.0004;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31298143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6636;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31298288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0489;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 31298356 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31298424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31298437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31298488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31298500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7560;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31298700 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9696;ERATE=0.0003;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31298728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4986;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31298750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7547;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31298769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.8271;AVGPOST=0.9957;RSQ=0.9885;ERATE=0.0004;THETA=0.0002;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 31298844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3765;AVGPOST=0.9854;RSQ=0.9785;ERATE=0.0031;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 31298910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31298931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31298934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0219;AVGPOST=0.9987;RSQ=0.9729;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31299107 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9001;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31299336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8426;ERATE=0.0005;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31299367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31299371 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.851;LDAF=0.0290;AVGPOST=0.9926;RSQ=0.8986;ERATE=0.0006;THETA=0.0020;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31299379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0006;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31299381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9812;ERATE=0.0003;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31299465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31299518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3735;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 31299574 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3749;AVGPOST=0.9923;RSQ=0.9878;ERATE=0.0015;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 31299639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31299750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31299766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7735;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31299870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31299901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8409;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31299979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31300032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0908;AVGPOST=0.9968;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 31300073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7420;ERATE=0.0004;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31300097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0127;AVGPOST=0.9975;RSQ=0.9241;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31300135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7627;ERATE=0.0008;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31300136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31300296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7758;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31300494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31300530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31300716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0200;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31300729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31300801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31300862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2953;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31300932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31300949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8461;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31301130 . CTG C 11673 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1011;AVGPOST=0.9944;RSQ=0.9781;ERATE=0.0005;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 31301214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31301355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9386;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31301412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0270;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31301605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9606;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31301779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0489;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 31301797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7849;AVGPOST=0.9980;RSQ=0.9949;ERATE=0.0003;THETA=0.0013;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 31301821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0242;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 31301877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31301919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7620;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31302040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9481;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31302116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8135;ERATE=0.0007;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31302123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7783;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31302126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31302161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2188;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31302186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1118;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0004;THETA=0.0061;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31302332 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7973;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31302335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7830;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31302341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.5416;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31302489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0250;AVGPOST=0.9949;RSQ=0.9313;ERATE=0.0006;THETA=0.0013;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31302558 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31302604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31302714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31302796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31302872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8568;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31302874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31303005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8164;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31303026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31303068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31303114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31303139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7715;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31303152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9523;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31303208 . CATT C 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5680;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31303345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9310;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31303401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31303503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8275;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31303541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7435;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31303747 . TGAGA T 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4613;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31303964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.312;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31304006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0275;AVGPOST=0.9983;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31304049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0510;AVGPOST=0.9975;RSQ=0.9818;ERATE=0.0006;THETA=0.0040;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 31304073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9208;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31304092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.638;LDAF=0.0105;AVGPOST=0.9894;RSQ=0.6113;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31304126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4322;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31304133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7684;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31304141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1856;AVGPOST=0.9943;RSQ=0.9866;ERATE=0.0008;THETA=0.0013;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 31304261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31304305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1915;AVGPOST=0.9969;RSQ=0.9924;ERATE=0.0005;THETA=0.0006;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 31304383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6373;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31304396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.668;LDAF=0.0368;AVGPOST=0.9785;RSQ=0.7800;ERATE=0.0007;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31304398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.627;LDAF=0.0095;AVGPOST=0.9913;RSQ=0.6368;ERATE=0.0007;THETA=0.0021;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31304625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.864;LDAF=0.3143;AVGPOST=0.9672;RSQ=0.9438;ERATE=0.0037;THETA=0.0004;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 31304773 . G GA 104 PASS INDEL;BAVGPOST=0.989;BRSQ=0.463;LDAF=0.0195;AVGPOST=0.9707;RSQ=0.4110;ERATE=0.0052;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31304936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31304979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4111;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31305037 . GT G 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4847;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31305106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0049;AVGPOST=0.9932;RSQ=0.4574;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31305240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.889;LDAF=0.0290;AVGPOST=0.9902;RSQ=0.8715;ERATE=0.0007;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31305242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1117;AVGPOST=0.9940;RSQ=0.9768;ERATE=0.0004;THETA=0.0010;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 31305366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31305490 . GTA G 6023 PASS INDEL;BAVGPOST=0.884;BRSQ=0.742;LDAF=0.2992;AVGPOST=0.8615;RSQ=0.7406;ERATE=0.0134;THETA=0.0006;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 31305492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.774;LDAF=0.1698;AVGPOST=0.9542;RSQ=0.8867;ERATE=0.0015;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 31305502 . A ATG 2113 PASS INDEL;BAVGPOST=0.894;BRSQ=0.677;LDAF=0.2196;AVGPOST=0.8312;RSQ=0.6167;ERATE=0.0194;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 31305504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.881;BRSQ=0.695;LDAF=0.2544;AVGPOST=0.8182;RSQ=0.6016;ERATE=0.0246;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 31305504 rs67209100 ATG A 895 PASS INDEL;BAVGPOST=0.854;BRSQ=0.654;LDAF=0.2830;AVGPOST=0.7730;RSQ=0.5452;ERATE=0.0278;THETA=0.0011;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 31305506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.620;LDAF=0.3202;AVGPOST=0.7703;RSQ=0.5459;ERATE=0.0440;THETA=0.0004;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 31305520 . ATATGTG A 1037 PASS INDEL;BAVGPOST=0.940;BRSQ=0.455;LDAF=0.0993;AVGPOST=0.9316;RSQ=0.6955;ERATE=0.0049;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 31305542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.805;BRSQ=0.490;LDAF=0.3090;AVGPOST=0.7423;RSQ=0.4608;ERATE=0.0584;THETA=0.0007;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 31305562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.766;BRSQ=0.467;LDAF=0.3087;AVGPOST=0.7640;RSQ=0.5059;ERATE=0.0502;THETA=0.0004;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 31305576 . G GTA 3008 PASS INDEL;BAVGPOST=0.930;BRSQ=0.388;LDAF=0.0855;AVGPOST=0.9019;RSQ=0.5406;ERATE=0.0100;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 31305578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.362;LDAF=0.1205;AVGPOST=0.8436;RSQ=0.4086;ERATE=0.0185;THETA=0.0008;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 31305586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.402;LDAF=0.1145;AVGPOST=0.8481;RSQ=0.3958;ERATE=0.0230;THETA=0.0017;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 31305646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.746;BRSQ=0.494;LDAF=0.4493;AVGPOST=0.7178;RSQ=0.4880;ERATE=0.1080;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 31305750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6660;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31305839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0040;AVGPOST=0.9957;RSQ=0.6130;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31305845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2067;AVGPOST=0.9963;RSQ=0.9910;ERATE=0.0005;THETA=0.0010;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 31305937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8981;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31306030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0173;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31306075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31306078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0065;AVGPOST=0.9959;RSQ=0.7428;ERATE=0.0013;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31306112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31306231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31306274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7249;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31306486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.984;LDAF=0.6232;AVGPOST=0.9883;RSQ=0.9823;ERATE=0.0011;THETA=0.0005;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 31306491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0068;AVGPOST=0.9966;RSQ=0.8229;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31306541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0555;AVGPOST=0.9973;RSQ=0.9781;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31306614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31306689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31306710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9742;ERATE=0.0003;THETA=0.0045;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31306714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5465;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31306756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6543;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31306958 . CTTAA C 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31307016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1103;AVGPOST=0.9941;RSQ=0.9768;ERATE=0.0008;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 31307031 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.769;LDAF=0.0083;AVGPOST=0.9976;RSQ=0.8816;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31307069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4731;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31307193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0335;AVGPOST=0.9985;RSQ=0.9854;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31307235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0192;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31307236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31307272 . T TA 4868 PASS INDEL;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0348;AVGPOST=0.9966;RSQ=0.9676;ERATE=0.0005;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31307356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31307357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31307425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31307440 . AC A 674 PASS INDEL;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0086;AVGPOST=0.9963;RSQ=0.8213;ERATE=0.0014;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31307578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8332;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31307594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31307667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31307693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9771;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31307709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8150;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31307790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8581;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31307940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5814;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31307993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31308074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31308092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31308177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1936;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 31308257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5073;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31308271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5201;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31308373 rs35104901 A AT 619 PASS INDEL;BAVGPOST=0.875;BRSQ=0.262;LDAF=0.1518;AVGPOST=0.7798;RSQ=0.3130;ERATE=0.0213;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 31308378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.725;BRSQ=0.533;LDAF=0.4688;AVGPOST=0.7209;RSQ=0.5574;ERATE=0.0373;THETA=0.0027;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 31308419 . TATATA T 1200 PASS INDEL;BAVGPOST=0.431;BRSQ=0.015;LDAF=0.6389;AVGPOST=0.6679;RSQ=0.3967;ERATE=0.0136;THETA=0.0008;AC=1484;AN=2184 GT:DS:GL:BD 0.67948717 1
1 31308421 . TATA T 835 PASS INDEL;BAVGPOST=0.362;BRSQ=0.015;LDAF=0.7563;AVGPOST=0.6904;RSQ=0.3047;ERATE=0.0121;THETA=0.0005;AC=1811;AN=2184 GT:DS:GL:BD 0.82921243 1
1 31308423 . TA T 445 PASS INDEL;BAVGPOST=0.401;BRSQ=0.018;LDAF=0.6624;AVGPOST=0.7354;RSQ=0.5194;ERATE=0.0134;THETA=0.0007;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 31308494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.892;LDAF=0.2300;AVGPOST=0.9101;RSQ=0.8040;ERATE=0.0116;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 31308714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9220;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31308726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3451;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31308803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.3585;AVGPOST=0.9829;RSQ=0.9720;ERATE=0.0009;THETA=0.0006;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 31308850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1140;AVGPOST=0.9942;RSQ=0.9796;ERATE=0.0005;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31308883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1926;AVGPOST=0.9900;RSQ=0.9768;ERATE=0.0009;THETA=0.0005;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 31308918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2462;AVGPOST=0.9962;RSQ=0.9923;ERATE=0.0007;THETA=0.0006;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 31309041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.390;LDAF=0.0106;AVGPOST=0.9877;RSQ=0.5347;ERATE=0.0011;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31309176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4382;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31309298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7810;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31309300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5775;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31309316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0189;AVGPOST=0.9984;RSQ=0.9712;ERATE=0.0003;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31309449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9548;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31309461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6758;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31309496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31309641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31309650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31309683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0005;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31309714 . GAT G 8840 PASS INDEL;BAVGPOST=0.823;BRSQ=0.729;LDAF=0.4477;AVGPOST=0.8024;RSQ=0.7254;ERATE=0.0529;THETA=0.0003;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 31309717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.947;LDAF=0.5973;AVGPOST=0.9712;RSQ=0.9598;ERATE=0.0005;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 31309718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.947;LDAF=0.5952;AVGPOST=0.9696;RSQ=0.9573;ERATE=0.0003;THETA=0.0002;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 31309718 . T TGG 28837 PASS INDEL;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.5934;AVGPOST=0.9672;RSQ=0.9533;ERATE=0.0024;THETA=0.0021;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 31309733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31309737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.7018;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31309760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31309765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31309912 rs113802352 CAGTT C 28929 PASS INDEL;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.2039;AVGPOST=0.9899;RSQ=0.9789;ERATE=0.0009;THETA=0.0008;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 31310007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31310094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31310105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7547;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31310289 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31310332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7500;ERATE=0.0005;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31310380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31310422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3199;AVGPOST=0.9940;RSQ=0.9902;ERATE=0.0003;THETA=0.0017;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 31310472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31310648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31310683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9413;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31310696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31310720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31310752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0087;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8876;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31311062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1152;AVGPOST=0.9933;RSQ=0.9781;ERATE=0.0005;THETA=0.0074;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 31311145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31311179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9755;ERATE=0.0003;THETA=0.0038;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31311181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8605;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31311187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9565;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31311247 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0004;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31311272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0369;AVGPOST=0.9961;RSQ=0.9605;ERATE=0.0011;THETA=0.0035;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31311418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.6666;AVGPOST=0.9775;RSQ=0.9618;ERATE=0.0053;THETA=0.0069;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 31311443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0239;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31311460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0455;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0003;THETA=0.0021;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 31311517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8787;ERATE=0.0004;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31311527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8979;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31311533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0248;AVGPOST=0.9976;RSQ=0.9657;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 31311579 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2235;AVGPOST=0.9928;RSQ=0.9846;ERATE=0.0011;THETA=0.0031;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 31311870 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311880 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1658;AVGPOST=0.9969;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 31311932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31311971 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31311972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31312012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8980;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31312023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7234;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31312049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31312055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31312099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31312207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9672;ERATE=0.0003;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31312321 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31312382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31312571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8564;AVGPOST=0.9957;RSQ=0.9881;ERATE=0.0003;THETA=0.0076;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 31312602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31312706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31312825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9028;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31312848 . GTGGA G 88 PASS INDEL;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0062;AVGPOST=0.9919;RSQ=0.4834;ERATE=0.0014;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31312862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31312874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31312892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9026;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31312903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9994;RSQ=0.0923;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 31313008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6682;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31313110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.906;LDAF=0.0412;AVGPOST=0.9963;RSQ=0.9655;ERATE=0.0006;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31313121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.682;LDAF=0.0914;AVGPOST=0.9258;RSQ=0.6489;ERATE=0.0174;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 31313122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.755;LDAF=0.0132;AVGPOST=0.9913;RSQ=0.7473;ERATE=0.0010;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31313143 . ATGGC A 72172 PASS INDEL;BAVGPOST=0.992;BRSQ=0.388;LDAF=0.9897;AVGPOST=0.9828;RSQ=0.3328;ERATE=0.0020;THETA=0.0007;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 31313196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31313299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8253;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31313309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0803;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 31313378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8597;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31313405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0240;AVGPOST=0.9992;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31313417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1939;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0006;THETA=0.0006;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 31313444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8010;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31313455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5954;ERATE=0.0009;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31313578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0249;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 31313653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0329;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 31313666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9409;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31313752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1656;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0005;THETA=0.0015;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 31313863 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0102;AVGPOST=0.9991;RSQ=0.9712;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31313866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31313969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31313978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2559;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0003;THETA=0.0001;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 31314185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6786;AVGPOST=0.9980;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 31314200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31314225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0774;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 31314294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0336;AVGPOST=0.9991;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31314325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31314433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31314549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1980;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 31314554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2022;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 31314575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31314604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9517;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31314609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31314613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1628;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 31314636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8722;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31314664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31314687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1982;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 31314834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31314851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2123;AVGPOST=0.9963;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 31314861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9072;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31314946 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0201;AVGPOST=0.9992;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31315031 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31315101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31315135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7170;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31315153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2433;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 31315191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8472;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 31315198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9290;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31315206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7893;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31315235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31315286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1041;AVGPOST=0.9938;RSQ=0.9771;ERATE=0.0003;THETA=0.0006;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 31315318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1987;AVGPOST=0.9971;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 31315328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31315402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8473;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 31315415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31315520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5492;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31315535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7136;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31315593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6199;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 31315599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0501;AVGPOST=0.9963;RSQ=0.9724;ERATE=0.0003;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 31315608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31315624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9990;RSQ=0.9913;ERATE=0.0003;THETA=0.0015;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 31315685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31315755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8599;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31315793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31315944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9987;RSQ=0.9689;ERATE=0.0003;THETA=0.0017;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31315959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31316029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1990;AVGPOST=0.9961;RSQ=0.9910;ERATE=0.0005;THETA=0.0059;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 31316212 . T TA 634 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0109;AVGPOST=0.9985;RSQ=0.9412;ERATE=0.0004;THETA=0.0039;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31316213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9530;ERATE=0.0003;THETA=0.0025;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31316274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7422;ERATE=0.0010;THETA=0.0081;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31316280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.694;LDAF=0.0046;AVGPOST=0.9951;RSQ=0.6141;ERATE=0.0004;THETA=0.0066;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31316300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0228;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0003;THETA=0.0020;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31316324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5794;ERATE=0.0005;THETA=0.0093;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31316336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0290;AVGPOST=0.9957;RSQ=0.9443;ERATE=0.0005;THETA=0.0081;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 31316347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8701;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31316455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.389;LDAF=0.0074;AVGPOST=0.9927;RSQ=0.6004;ERATE=0.0013;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31316465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0053;AVGPOST=0.9974;RSQ=0.8353;ERATE=0.0004;THETA=0.0065;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31316495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1612;AVGPOST=0.9869;RSQ=0.9674;ERATE=0.0004;THETA=0.0197;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 31316596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0003;THETA=0.0152;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31316646 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0005;THETA=0.0210;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31316726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8036;ERATE=0.0003;THETA=0.0225;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31316789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0160;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31316845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0004;THETA=0.0268;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31316962 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8431;ERATE=0.0009;THETA=0.0056;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31317007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0192;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31317094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5621;ERATE=0.0004;THETA=0.0274;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31317102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.836;LDAF=0.0200;AVGPOST=0.9922;RSQ=0.8465;ERATE=0.0020;THETA=0.0220;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31317106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0005;THETA=0.0170;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31317129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0082;AVGPOST=0.9956;RSQ=0.7970;ERATE=0.0005;THETA=0.0149;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31317184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31317186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31317233 rs71844667 A AC 5476 PASS INDEL;BAVGPOST=0.967;BRSQ=0.747;LDAF=0.0680;AVGPOST=0.9587;RSQ=0.7299;ERATE=0.0097;THETA=0.0328;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 31317259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7446;ERATE=0.0003;THETA=0.0117;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31317480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.930;LDAF=0.2517;AVGPOST=0.9592;RSQ=0.9252;ERATE=0.0157;THETA=0.0156;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 31317530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.942;LDAF=0.7916;AVGPOST=0.9721;RSQ=0.9419;ERATE=0.0006;THETA=0.0431;AC=1736;AN=2184 GT:DS:GL:BD 0.79487181 1
1 31317660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.959;LDAF=0.0923;AVGPOST=0.9926;RSQ=0.9658;ERATE=0.0010;THETA=0.0063;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 31317692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0822;AVGPOST=0.9957;RSQ=0.9777;ERATE=0.0005;THETA=0.0084;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 31317699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7666;ERATE=0.0004;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31317723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0004;THETA=0.0140;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31317754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9348;ERATE=0.0003;THETA=0.0123;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31317903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0012;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31317953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31317968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9542;ERATE=0.0003;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31318030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0267;AVGPOST=0.9956;RSQ=0.9414;ERATE=0.0003;THETA=0.0018;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31318133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0862;AVGPOST=0.9961;RSQ=0.9825;ERATE=0.0003;THETA=0.0046;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 31318159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0293;AVGPOST=0.9947;RSQ=0.9407;ERATE=0.0003;THETA=0.0076;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31318208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31318218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31318262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7265;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31318388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8613;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31318408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0884;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0003;THETA=0.0012;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 31318427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31318457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8326;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31318515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9139;ERATE=0.0003;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31318578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8063;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31318604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.4894;AVGPOST=0.9863;RSQ=0.9810;ERATE=0.0010;THETA=0.0005;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 31318671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31318754 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0881;AVGPOST=0.9977;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 31318777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31318852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31318896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9038;ERATE=0.0004;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31318918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.9148;AVGPOST=0.9954;RSQ=0.9798;ERATE=0.0003;THETA=0.0010;AC=2000;AN=2184 GT:DS:GL:BD 0.91575092 1
1 31318922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.6502;AVGPOST=0.9931;RSQ=0.9891;ERATE=0.0005;THETA=0.0002;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 31318939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7656;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31318963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31318965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8829;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31318995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.827;LDAF=0.0101;AVGPOST=0.9958;RSQ=0.8423;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31319003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1264;AVGPOST=0.9974;RSQ=0.9914;ERATE=0.0004;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 31319403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0102;AVGPOST=0.9970;RSQ=0.8880;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31319466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1291;AVGPOST=0.9973;RSQ=0.9905;ERATE=0.0006;THETA=0.0006;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 31319511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0005;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31319662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.9093;AVGPOST=0.9979;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=1987;AN=2184 GT:DS:GL:BD 0.90979856 1
1 31319674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6535;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31319676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31319683 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3264;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0003;THETA=0.0001;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 31319705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31319706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7555;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31319736 rs57333837 G GA 525 PASS INDEL;BAVGPOST=0.991;BRSQ=0.805;LDAF=0.0151;AVGPOST=0.9858;RSQ=0.6203;ERATE=0.0028;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31319768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0113;AVGPOST=0.9981;RSQ=0.9287;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31319769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9120;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31319985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31320036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9417;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31320072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0843;AVGPOST=0.9982;RSQ=0.9917;ERATE=0.0004;THETA=0.0011;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 31320174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1178;AVGPOST=0.9970;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 31320178 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31320210 rs60255852 AGAGTCCACGAGTCCT A 50330 PASS INDEL;BAVGPOST=0.950;BRSQ=0.900;LDAF=0.3063;AVGPOST=0.9445;RSQ=0.9061;ERATE=0.0095;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 31320380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0072;AVGPOST=0.9909;RSQ=0.5434;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31320381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.4430;AVGPOST=0.9944;RSQ=0.9908;ERATE=0.0006;THETA=0.0012;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 31320523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0565;AVGPOST=0.9944;RSQ=0.9621;ERATE=0.0004;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31320529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8454;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31320554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9984;RSQ=0.3357;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31320632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31320651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3249;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 31320710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9242;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31320785 . GA G 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31320794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0212;AVGPOST=0.9987;RSQ=0.9767;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31320804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.938;LDAF=0.1142;AVGPOST=0.9845;RSQ=0.9446;ERATE=0.0020;THETA=0.0006;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 31320881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0206;AVGPOST=0.9980;RSQ=0.9610;ERATE=0.0005;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31320905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31320978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.7315;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31321130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4694;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0226;AVGPOST=0.9993;RSQ=0.9855;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31321233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9608;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31321279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0003;THETA=0.0111;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31321341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9816;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31321409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9490;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31321491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31321544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0197;AVGPOST=0.9984;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31321549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0199;AVGPOST=0.9986;RSQ=0.9782;ERATE=0.0003;THETA=0.0035;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31321573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0282;AVGPOST=0.9967;RSQ=0.9538;ERATE=0.0006;THETA=0.0018;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31321577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0883;AVGPOST=0.9971;RSQ=0.9858;ERATE=0.0005;THETA=0.0074;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 31321648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7742;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31321677 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0122;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0003;THETA=0.0039;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31321781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8871;ERATE=0.0003;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31321867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31321910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0270;AVGPOST=0.9977;RSQ=0.9661;ERATE=0.0003;THETA=0.0085;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31321995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7917;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31322065 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31322089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7902;ERATE=0.0004;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31322146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9442;ERATE=0.0005;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31322183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9625;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31322236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31322237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31322360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1208;AVGPOST=0.9964;RSQ=0.9860;ERATE=0.0005;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 31322371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9697;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31322430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7665;ERATE=0.0003;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31322457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7357;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31322463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5519;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31322475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0070;AVGPOST=0.9940;RSQ=0.6428;ERATE=0.0012;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31322485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0061;AVGPOST=0.9959;RSQ=0.7662;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31322580 . CAT C 1696 PASS INDEL;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0274;AVGPOST=0.9963;RSQ=0.9479;ERATE=0.0004;THETA=0.0026;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31322657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0048;AVGPOST=0.9947;RSQ=0.5408;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31322767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.896;LDAF=0.1715;AVGPOST=0.9775;RSQ=0.9402;ERATE=0.0017;THETA=0.0011;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 31322817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31322826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6507;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31322835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0260;AVGPOST=0.9988;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31322927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31323072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8686;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31323142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0142;AVGPOST=0.9987;RSQ=0.9641;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31323151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5578;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31323539 . GC G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.7179;AVGPOST=0.9880;RSQ=0.9783;ERATE=0.0003;THETA=0.0004;AC=1572;AN=2184 GT:DS:GL:BD 0.71978021 1
1 31323602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31323666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31323723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6625;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31323880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3413;AVGPOST=0.9943;RSQ=0.9906;ERATE=0.0004;THETA=0.0012;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 31323884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31323895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3412;AVGPOST=0.9945;RSQ=0.9906;ERATE=0.0007;THETA=0.0003;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 31323907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.7040;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31323909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1224;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 31324093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7680;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 31324138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31324142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8315;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31324200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7974;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31324246 . TG T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6887;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31324318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7674;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0007;THETA=0.0003;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 31324420 . TGGGGATAC T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8308;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31324476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31324539 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9680;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31324558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.796;LDAF=0.0113;AVGPOST=0.9935;RSQ=0.7956;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31324620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7397;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31324881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3691;AVGPOST=0.9959;RSQ=0.9929;ERATE=0.0011;THETA=0.0002;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 31325027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1074;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 31325042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31325090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2053;AVGPOST=0.9962;RSQ=0.9911;ERATE=0.0012;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 31325108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31325180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31325217 . G GGT 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.4753;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31325236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31325237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.7938;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31325283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31325329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31325399 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8847;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31325421 . CCA C 315 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7518;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31325541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31325574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31325710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31325813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31325880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7176;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31325894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8529;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31326005 . A AC 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4246;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31326018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31326033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31326069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9362;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31326169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0359;AVGPOST=0.9985;RSQ=0.9806;ERATE=0.0004;THETA=0.0001;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31326201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3346;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0006;THETA=0.0002;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 31326299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1234;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31326377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31326404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7660;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 31326527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1984;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0004;THETA=0.0009;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 31326533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0006;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31326540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31326571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31326589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0254;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31326636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31326763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31326841 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6669;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31326887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31326941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8374;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31326966 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3814;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 31327011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3345;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 31327020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4946;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31327229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 31327251 . TATC T 5415 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9985;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31327492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31327541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0132;AVGPOST=0.9967;RSQ=0.8946;ERATE=0.0003;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31327654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.1229;AVGPOST=0.9926;RSQ=0.9746;ERATE=0.0016;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 31327761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31327804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1237;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31327810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9242;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31327821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31327925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31327941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3733;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 31328033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9141;ERATE=0.0004;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31328202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7322;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31328220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31328520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6234;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31328566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31328666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3796;AVGPOST=0.9954;RSQ=0.9921;ERATE=0.0010;THETA=0.0040;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 31328860 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31328935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31328955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5525;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.818;LDAF=0.0294;AVGPOST=0.9918;RSQ=0.8969;ERATE=0.0005;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31329115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9451;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31329128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0383;AVGPOST=0.9989;RSQ=0.9890;ERATE=0.0004;THETA=0.0011;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 31329153 . CT C 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9286;ERATE=0.0003;THETA=0.0029;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31329225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.3316;AVGPOST=0.9880;RSQ=0.9794;ERATE=0.0005;THETA=0.0002;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 31329343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329414 . A ACG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31329451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31329483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7127;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31329484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329501 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31329526 . CA C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6868;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31329552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7199;ERATE=0.0003;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31329583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31329695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31329703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6046;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31329797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.752;LDAF=0.0069;AVGPOST=0.9955;RSQ=0.7565;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31329812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.9234;AVGPOST=0.9975;RSQ=0.9871;ERATE=0.0004;THETA=0.0011;AC=2018;AN=2184 GT:DS:GL:BD 0.92399269 1
1 31330181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8726;AVGPOST=0.9981;RSQ=0.9927;ERATE=0.0005;THETA=0.0010;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 31330271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0146;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31330389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.959;LDAF=0.3945;AVGPOST=0.9669;RSQ=0.9460;ERATE=0.0039;THETA=0.0065;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 31330402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.7861;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31330437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9234;ERATE=0.0005;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31330607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8005;ERATE=0.0003;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31330732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3120;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 31330759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4861;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31330836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31330841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8927;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31330844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3120;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0006;THETA=0.0002;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 31330926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31331008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31331057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5309;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31331127 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.933;LDAF=0.0316;AVGPOST=0.9940;RSQ=0.9309;ERATE=0.0004;THETA=0.0001;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 31331135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.932;LDAF=0.0314;AVGPOST=0.9943;RSQ=0.9358;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 31331137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1006;AVGPOST=0.9980;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 31331152 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31331276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0117;AVGPOST=0.9981;RSQ=0.9400;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31331335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31331349 . G GC 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31331387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9175;AVGPOST=0.9981;RSQ=0.9897;ERATE=0.0006;THETA=0.0002;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 31331398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31331419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6775;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31331466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0944;AVGPOST=0.9986;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 31331677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6145;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31331751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.8987;ERATE=0.0004;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31331963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31332102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.945;LDAF=0.0694;AVGPOST=0.9921;RSQ=0.9551;ERATE=0.0004;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 31332112 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9268;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31332191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1013;AVGPOST=0.9974;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 31332249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3819;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0004;THETA=0.0012;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 31332317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9984;RSQ=0.9695;ERATE=0.0003;THETA=0.0001;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31332378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31332394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.0991;AVGPOST=0.9974;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 31332520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31332556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31332633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31332659 rs76925672 TC T 3192 PASS INDEL;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0380;AVGPOST=0.9988;RSQ=0.9873;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 31332726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9050;ERATE=0.0003;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31332855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31332873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.9164;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31332983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31333023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3851;AVGPOST=0.9913;RSQ=0.9862;ERATE=0.0014;THETA=0.0005;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 31333066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31333137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31333190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31333219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31333225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31333243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0218;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0003;THETA=0.0012;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31333355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31333408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0116;AVGPOST=0.9991;RSQ=0.9651;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31333474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2327;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 31333495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31333496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31333551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7671;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31333582 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31333599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8809;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 31333749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6672;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31333780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1348;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 31333848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7096;ERATE=0.0005;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31333854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31333868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8309;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31333901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3919;AVGPOST=0.9926;RSQ=0.9879;ERATE=0.0021;THETA=0.0007;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 31333930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5359;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31333993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8806;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0006;THETA=0.0003;AC=1925;AN=2184 GT:DS:GL:BD 0.88141024 1
1 31334044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31334130 . TC T 909 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.9106;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31334135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7619;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31334186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31334215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0105;AVGPOST=0.9980;RSQ=0.9186;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31334306 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31334310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7008;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31334415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2361;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 31334447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31334451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31334525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31334617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3883;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0006;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 31334639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31334750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31334814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31334846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7668;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31334868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4561;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31335147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9529;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31335176 . TTAC T 29080 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2125;AVGPOST=0.9961;RSQ=0.9911;ERATE=0.0008;THETA=0.0008;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 31335379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2348;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 31335410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31335497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8519;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31335505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31335556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.0985;AVGPOST=0.9935;RSQ=0.9743;ERATE=0.0009;THETA=0.0002;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 31335577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5446;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31335623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9253;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31335661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.512;LDAF=0.0038;AVGPOST=0.9952;RSQ=0.4910;ERATE=0.0009;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31335673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6827;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31335744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0070;AVGPOST=0.9927;RSQ=0.6126;ERATE=0.0006;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31335762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3892;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0007;THETA=0.0002;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 31335779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6231;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31335800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6564;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31335810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1846;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 31335877 . T TTTTTG 3983 PASS INDEL;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0211;AVGPOST=0.9979;RSQ=0.9578;ERATE=0.0005;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31335902 . G GT 634 PASS INDEL;BAVGPOST=0.967;BRSQ=0.613;LDAF=0.0605;AVGPOST=0.9326;RSQ=0.5354;ERATE=0.0149;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 31335917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.890;LDAF=0.8488;AVGPOST=0.9514;RSQ=0.8486;ERATE=0.0110;THETA=0.0002;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 31336189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0030;AVGPOST=0.9950;RSQ=0.2974;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31336267 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2351;AVGPOST=0.9962;RSQ=0.9916;ERATE=0.0008;THETA=0.0003;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 31336320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0992;AVGPOST=0.9968;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 31336331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0373;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31336420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31336439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2191;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 31336477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31336547 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9486;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31336693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0226;AVGPOST=0.9981;RSQ=0.9713;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 31336926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2137;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 31336957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4340;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 31336990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7872;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31337198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31337263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7399;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31337293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9242;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0013;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 31337325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3849;AVGPOST=0.9906;RSQ=0.9853;ERATE=0.0033;THETA=0.0005;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 31337398 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7494;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31337417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2241;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 31337443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31337526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31337560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9237;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 31337563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8861;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31337671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6876;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31337703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0440;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 31337739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1922;AVGPOST=0.9968;RSQ=0.9926;ERATE=0.0004;THETA=0.0050;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 31337751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8825;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31337851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4814;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31337875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31337942 rs71569952 A ATTATT 10873 PASS INDEL;BAVGPOST=0.936;BRSQ=0.848;LDAF=0.2421;AVGPOST=0.9255;RSQ=0.8510;ERATE=0.0071;THETA=0.0008;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 31337975 . TTG T 247 PASS INDEL;BAVGPOST=0.759;BRSQ=0.204;LDAF=0.1931;AVGPOST=0.7527;RSQ=0.3598;ERATE=0.0233;THETA=0.0009;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 31338020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.919;LDAF=0.9128;AVGPOST=0.9792;RSQ=0.9018;ERATE=0.0008;THETA=0.0008;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 31338024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.954;LDAF=0.8741;AVGPOST=0.9874;RSQ=0.9541;ERATE=0.0010;THETA=0.0004;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 31338307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7971;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31338312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31338321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31338360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0951;AVGPOST=0.9938;RSQ=0.9711;ERATE=0.0007;THETA=0.0013;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 31338387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7546;ERATE=0.0003;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31338635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8626;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31338832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6169;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31338842 . A AT 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9956;RSQ=0.7166;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31338843 . A AT 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9947;RSQ=0.7072;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31339011 . C CT 80 PASS INDEL;BAVGPOST=0.993;BRSQ=0.492;LDAF=0.0168;AVGPOST=0.9772;RSQ=0.4354;ERATE=0.0051;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31339127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6184;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31339175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5418;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31339240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31339306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6798;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31339313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31339493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9306;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31339570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3889;AVGPOST=0.9908;RSQ=0.9855;ERATE=0.0003;THETA=0.0013;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 31339615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1086;AVGPOST=0.9920;RSQ=0.9682;ERATE=0.0007;THETA=0.0079;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 31339743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9792;ERATE=0.0003;THETA=0.0023;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31339792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7732;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31339932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31340044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2063;AVGPOST=0.9960;RSQ=0.9934;ERATE=0.0003;THETA=0.0078;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 31340208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0158;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31340240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9745;ERATE=0.0003;THETA=0.0165;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31340254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31340371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8382;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31340436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0504;AVGPOST=0.9926;RSQ=0.9411;ERATE=0.0010;THETA=0.0015;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 31340550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.9116;ERATE=0.0003;THETA=0.0112;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31340601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.956;LDAF=0.1959;AVGPOST=0.9833;RSQ=0.9679;ERATE=0.0011;THETA=0.0038;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 31340736 . AC A 1637 PASS INDEL;BAVGPOST=0.635;BRSQ=0.437;LDAF=0.4507;AVGPOST=0.7076;RSQ=0.5370;ERATE=0.0173;THETA=0.0086;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 31340743 . CCCT C 8069 PASS INDEL;BAVGPOST=0.751;BRSQ=0.572;LDAF=0.5997;AVGPOST=0.7734;RSQ=0.6505;ERATE=0.0140;THETA=0.0007;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 31340744 . CCT C 14543 PASS INDEL;BAVGPOST=0.797;BRSQ=0.634;LDAF=0.6877;AVGPOST=0.8178;RSQ=0.7029;ERATE=0.0041;THETA=0.0039;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 31340745 rs10715912 CT C 19640 PASS INDEL;BAVGPOST=0.966;BRSQ=0.209;LDAF=0.9525;AVGPOST=0.9313;RSQ=0.4163;ERATE=0.0030;THETA=0.0033;AC=2123;AN=2184 GT:DS:GL:BD 0.97206962 1
1 31340746 rs10715912 TC T 906 PASS INDEL;BAVGPOST=0.603;BRSQ=0.379;LDAF=0.4241;AVGPOST=0.7166;RSQ=0.5418;ERATE=0.0106;THETA=0.0066;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 31340958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7834;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31341118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0004;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31341186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31341297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31341331 . CAAG C 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3434;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31341476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7280;ERATE=0.0003;THETA=0.0105;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31341478 . GC G 14107 PASS INDEL;BAVGPOST=0.963;BRSQ=0.941;LDAF=0.3573;AVGPOST=0.9642;RSQ=0.9500;ERATE=0.0014;THETA=0.0073;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 31341479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.3649;AVGPOST=0.9738;RSQ=0.9648;ERATE=0.0005;THETA=0.0002;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 31341480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.3662;AVGPOST=0.9731;RSQ=0.9639;ERATE=0.0004;THETA=0.0006;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 31341555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6051;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31341564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0140;AVGPOST=0.9989;RSQ=0.9653;ERATE=0.0004;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31341565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31341710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31341903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31341951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31341966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.8140;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31341976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5895;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31342050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31342124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0385;AVGPOST=0.9971;RSQ=0.9718;ERATE=0.0004;THETA=0.0089;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31342385 rs10624994 A AAC 11780 PASS INDEL;BAVGPOST=0.897;BRSQ=0.800;LDAF=0.3942;AVGPOST=0.9041;RSQ=0.8453;ERATE=0.0014;THETA=0.0004;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 31342386 . A AC 10766 PASS INDEL;BAVGPOST=0.898;BRSQ=0.801;LDAF=0.3895;AVGPOST=0.9005;RSQ=0.8390;ERATE=0.0023;THETA=0.0004;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 31342415 . C CA 44 PASS INDEL;BAVGPOST=0.961;BRSQ=0.083;LDAF=0.0763;AVGPOST=0.8869;RSQ=0.3884;ERATE=0.0074;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31342455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.5112;ERATE=0.0003;THETA=0.0122;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31342488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31342498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31342590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1437;AVGPOST=0.9915;RSQ=0.9722;ERATE=0.0004;THETA=0.0005;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 31342952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8567;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31342992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5523;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31343007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7591;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31343079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9467;ERATE=0.0003;THETA=0.0053;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31343104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5648;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31343303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9117;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31343398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31343548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6319;ERATE=0.0007;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31343609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31343754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8342;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31343924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6480;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31343989 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7272;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31344055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8928;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31344250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1847;AVGPOST=0.9889;RSQ=0.9741;ERATE=0.0021;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 31344424 . CA C 1001 PASS INDEL;BAVGPOST=0.983;BRSQ=0.692;LDAF=0.0245;AVGPOST=0.9858;RSQ=0.7782;ERATE=0.0006;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31344506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4170;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31344626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7347;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31344628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0286;AVGPOST=0.9979;RSQ=0.9685;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31344672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8570;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31344765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.841;LDAF=0.0103;AVGPOST=0.9956;RSQ=0.8407;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31344846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0111;AVGPOST=0.9971;RSQ=0.9099;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31344864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8898;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31344952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.986;LDAF=0.3827;AVGPOST=0.9864;RSQ=0.9799;ERATE=0.0006;THETA=0.0005;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 31344960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31344994 . A ATTTAC 399 PASS INDEL;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5742;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31345228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8459;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31345261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7767;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31345274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9474;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31345295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31345330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31345434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9723;ERATE=0.0003;THETA=0.0039;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31345572 . GC G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5174;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31345672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31345731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31345747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1715;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 31345775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.9066;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31345778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31345785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0504;AVGPOST=0.9987;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 31345817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31345823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8870;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31345848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31345892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0769;AVGPOST=0.9979;RSQ=0.9885;ERATE=0.0007;THETA=0.0007;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 31345981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9513;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31346057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1825;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 31346102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31346172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31346199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0687;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0010;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 31346246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31346260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31346357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31346414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7984;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31346618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0201;AVGPOST=0.9966;RSQ=0.9446;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31346818 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31346995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31347062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1860;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 31347074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0285;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 31347148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31347160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31347238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7954;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31347242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1796;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 31347342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31347394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31347399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1759;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 31347401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347439 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.8533;ERATE=0.0003;THETA=0.0046;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31347466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31347515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31347544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31347569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31347717 . CACA C 1829 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31347835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5314;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31347878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6392;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31347879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31347954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8758;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31348070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8476;ERATE=0.0005;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31348095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31348125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31348142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7942;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31348312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0068;AVGPOST=0.9974;RSQ=0.8480;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31348354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8604;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31348356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0066;AVGPOST=0.9971;RSQ=0.8095;ERATE=0.0010;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31348418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8885;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31348427 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31348498 . GGC G 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31348620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7601;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31348640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1836;AVGPOST=0.9945;RSQ=0.9891;ERATE=0.0008;THETA=0.0002;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 31348692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0120;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31348697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31348869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.7045;ERATE=0.0005;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31349155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0604;AVGPOST=0.9974;RSQ=0.9852;ERATE=0.0005;THETA=0.0032;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 31349308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31349365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7350;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31349425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31349445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31349489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0020;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31349542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9552;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31349557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8963;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31349561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349571 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.875;LDAF=0.0339;AVGPOST=0.9891;RSQ=0.8795;ERATE=0.0112;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31349647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1016;AVGPOST=0.9985;RSQ=0.9928;ERATE=0.0004;THETA=0.0021;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 31349675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0776;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0020;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 31349677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31349679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31349736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8923;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31349763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31349977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31349983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9999;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31349997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31350117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31350122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0136;AVGPOST=0.9973;RSQ=0.9310;ERATE=0.0003;THETA=0.0014;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31350307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4840;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31350414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0100;AVGPOST=0.9967;RSQ=0.8751;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31350501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2064;AVGPOST=0.9946;RSQ=0.9898;ERATE=0.0004;THETA=0.0035;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 31350525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0348;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 31350566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7504;AVGPOST=0.9936;RSQ=0.9869;ERATE=0.0005;THETA=0.0004;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 31350643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31350856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3880;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31350938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31350993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8446;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31351037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6849;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31351168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9326;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31351236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8931;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31351280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2514;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 31351347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7772;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31351394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0384;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 31351425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31351459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31351510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31351513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1825;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 31351522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31351551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31351608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31351713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31351729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0460;AVGPOST=0.9983;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31351955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5217;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31351989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0622;AVGPOST=0.9953;RSQ=0.9692;ERATE=0.0006;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 31352028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6474;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31352095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6400;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31352130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0066;AVGPOST=0.9929;RSQ=0.5629;ERATE=0.0013;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31352178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8914;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31352275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4934;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31352419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5385;AVGPOST=0.9841;RSQ=0.9775;ERATE=0.0034;THETA=0.0004;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 31352541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0400;AVGPOST=0.9991;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 31352587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31352640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31352740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9298;ERATE=0.0003;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31352786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0316;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31352843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9239;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31352906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9624;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31353019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31353082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.680;LDAF=0.0596;AVGPOST=0.9496;RSQ=0.6373;ERATE=0.0249;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 31353118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4592;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31353169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0090;AVGPOST=0.9955;RSQ=0.7928;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31353194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0096;AVGPOST=0.9975;RSQ=0.9007;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31353241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0310;AVGPOST=0.9958;RSQ=0.9507;ERATE=0.0009;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 31353291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9122;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31353360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31353400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31353409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3208;AVGPOST=0.9923;RSQ=0.9877;ERATE=0.0013;THETA=0.0003;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 31353598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7266;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31353623 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31353850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7281;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31353875 . C CAA 8432 PASS INDEL;BAVGPOST=0.927;BRSQ=0.772;LDAF=0.1718;AVGPOST=0.9141;RSQ=0.7976;ERATE=0.0184;THETA=0.0006;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 31353877 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.2067;AVGPOST=0.9919;RSQ=0.9838;ERATE=0.0003;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 31353888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7590;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31353894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0283;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 31353923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0292;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 31353945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31354042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31354045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31354062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31354077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0556;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31354110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31354112 . GAC G 179 PASS INDEL;BAVGPOST=0.982;BRSQ=0.640;LDAF=0.0355;AVGPOST=0.9626;RSQ=0.5568;ERATE=0.0135;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31354118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.9050;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31354164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2192;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 31354225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9009;ERATE=0.0015;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31354380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2260;AVGPOST=0.9949;RSQ=0.9906;ERATE=0.0007;THETA=0.0003;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 31354497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2142;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 31354717 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31354797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31354813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6342;AVGPOST=0.9955;RSQ=0.9930;ERATE=0.0007;THETA=0.0005;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 31354841 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31354878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31354951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31355066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31355087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6895;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31355307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0628;AVGPOST=0.9985;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 31355480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8564;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31355501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31355530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8786;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31355690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8092;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31355761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31355860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9518;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31355893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0256;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31355904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31356060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7397;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31356131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31356134 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31356147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31356264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31356450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0247;AVGPOST=0.9976;RSQ=0.9604;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31356472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31356602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5690;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31356623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8593;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31356685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9254;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31356686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6790;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31356692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31356713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8907;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31356722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31356763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0561;AVGPOST=0.9984;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 31356804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31356819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9378;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31356832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31356898 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3255;AVGPOST=0.9946;RSQ=0.9914;ERATE=0.0009;THETA=0.0005;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 31357170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0176;AVGPOST=0.9984;RSQ=0.9630;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31357257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0169;AVGPOST=0.9967;RSQ=0.9170;ERATE=0.0005;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31357398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31357454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31357516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4242;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 31357636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31357668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0486;AVGPOST=0.9957;RSQ=0.9673;ERATE=0.0008;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31357699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31357700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4246;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0006;THETA=0.0006;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 31357766 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0454;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0010;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 31357850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7338;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31357990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31358156 rs34167099 CT C 6017 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0546;AVGPOST=0.9979;RSQ=0.9830;ERATE=0.0006;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31358273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31358611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4867;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31358727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6401;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31358787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0125;AVGPOST=0.9924;RSQ=0.7522;ERATE=0.0015;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31358942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.7254;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31359061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8094;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31359096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9472;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31359282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7993;ERATE=0.0009;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31359323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31359471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31359578 . GA G 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31359662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31359913 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31360019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9328;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31360031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.884;LDAF=0.9849;AVGPOST=0.9962;RSQ=0.8918;ERATE=0.0003;THETA=0.0002;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 31360123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8474;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31360234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31360261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31360301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31360372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31360422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31360447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0426;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31360517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31360603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8601;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31360683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31360799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0540;AVGPOST=0.9974;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 31360852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31360942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.954;LDAF=0.9208;AVGPOST=0.9914;RSQ=0.9596;ERATE=0.0003;THETA=0.0005;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 31360964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0130;AVGPOST=0.9980;RSQ=0.9440;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31360973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31361050 . T TAG 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6605;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31361120 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31361327 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6350;AVGPOST=0.9934;RSQ=0.9893;ERATE=0.0007;THETA=0.0008;AC=1388;AN=2184 GT:DS:GL:BD 0.63553113 1
1 31361419 . GCA G 238 PASS INDEL;BAVGPOST=0.980;BRSQ=0.618;LDAF=0.0376;AVGPOST=0.9570;RSQ=0.5249;ERATE=0.0090;THETA=0.0039;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31361460 . ATG A 74 PASS INDEL;BAVGPOST=0.989;BRSQ=0.652;LDAF=0.0249;AVGPOST=0.9747;RSQ=0.5741;ERATE=0.0060;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31361462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0033;AVGPOST=0.9953;RSQ=0.4470;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31361496 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3669;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31361572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31361575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6118;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31361741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2440;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0004;THETA=0.0012;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 31361784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6886;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31361792 . G GC 13279 PASS INDEL;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.3822;AVGPOST=0.9713;RSQ=0.9616;ERATE=0.0019;THETA=0.0004;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 31361864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8954;ERATE=0.0003;THETA=0.0041;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31361906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9774;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31362033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31362103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31362224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6381;AVGPOST=0.9904;RSQ=0.9859;ERATE=0.0005;THETA=0.0022;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 31362253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5512;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31362310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31362321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4822;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31362333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6559;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31363034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6031;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31363104 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31363145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.940;LDAF=0.0671;AVGPOST=0.9925;RSQ=0.9582;ERATE=0.0004;THETA=0.0013;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 31363238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7614;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31363377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8941;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31363409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.982;LDAF=0.3994;AVGPOST=0.9836;RSQ=0.9766;ERATE=0.0004;THETA=0.0115;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 31363417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0168;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31363632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5932;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31363633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8915;ERATE=0.0003;THETA=0.0211;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31363646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0176;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31363713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0325;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31363730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0003;THETA=0.0178;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31364261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4254;ERATE=0.0005;THETA=0.0135;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31364374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0138;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31364376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.0726;AVGPOST=0.9911;RSQ=0.9579;ERATE=0.0005;THETA=0.0173;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 31364438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7247;ERATE=0.0007;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31364496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0250;AVGPOST=0.9901;RSQ=0.8536;ERATE=0.0005;THETA=0.0165;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31364506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0003;THETA=0.0144;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31364537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.8049;ERATE=0.0005;THETA=0.0064;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31364830 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.552;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.5636;ERATE=0.0006;THETA=0.0369;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31364865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0331;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31365085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0122;AVGPOST=0.9969;RSQ=0.9112;ERATE=0.0003;THETA=0.0127;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 31365289 rs71916891 GGAAT G 13966 PASS INDEL;BAVGPOST=0.935;BRSQ=0.868;LDAF=0.2439;AVGPOST=0.8946;RSQ=0.8007;ERATE=0.0131;THETA=0.0101;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 31365362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0181;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31365401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0137;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31365662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0106;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31365767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31365850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9453;ERATE=0.0003;THETA=0.0062;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31365887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5481;ERATE=0.0006;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31366052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.775;LDAF=0.0082;AVGPOST=0.9957;RSQ=0.8216;ERATE=0.0006;THETA=0.0081;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31366068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4140;ERATE=0.0004;THETA=0.0152;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31366164 . CA C 287 PASS INDEL;BAVGPOST=0.792;BRSQ=0.171;LDAF=0.2060;AVGPOST=0.7314;RSQ=0.3513;ERATE=0.0146;THETA=0.0101;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 31366222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.906;LDAF=0.2650;AVGPOST=0.9485;RSQ=0.9085;ERATE=0.0014;THETA=0.0016;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 31366390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7128;ERATE=0.0006;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31366494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31366515 . T TC 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6046;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31366540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31366735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6712;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31366764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0151;AVGPOST=0.9977;RSQ=0.9399;ERATE=0.0003;THETA=0.0025;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31366771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5302;AVGPOST=0.9924;RSQ=0.9885;ERATE=0.0006;THETA=0.0012;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 31366820 . CCA C 11 PASS INDEL;BAVGPOST=0.997;BRSQ=0.541;LDAF=0.0080;AVGPOST=0.9890;RSQ=0.4661;ERATE=0.0015;THETA=0.0027;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31366884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7080;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31366949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1098;AVGPOST=0.9962;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 31366952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31366967 . AGT A 214 PASS INDEL;BAVGPOST=0.993;BRSQ=0.704;LDAF=0.0144;AVGPOST=0.9878;RSQ=0.6663;ERATE=0.0036;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31367007 rs68075280 CGT C 4452 PASS INDEL;BAVGPOST=0.992;BRSQ=0.919;LDAF=0.0420;AVGPOST=0.9971;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 31367008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31367015 . TGA T 473 PASS INDEL;BAVGPOST=0.989;BRSQ=0.859;LDAF=0.0405;AVGPOST=0.9925;RSQ=0.9271;ERATE=0.0006;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 31367034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0391;AVGPOST=0.9977;RSQ=0.9788;ERATE=0.0004;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 31367039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.612;LDAF=0.0105;AVGPOST=0.9896;RSQ=0.6394;ERATE=0.0021;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31367065 . TGA T 123 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0055;AVGPOST=0.9953;RSQ=0.6490;ERATE=0.0011;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31367084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31367102 rs5773326 ATG A 55289 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5410;AVGPOST=0.9793;RSQ=0.9700;ERATE=0.0056;THETA=0.0003;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 31367151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5324;AVGPOST=0.9928;RSQ=0.9893;ERATE=0.0010;THETA=0.0003;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 31367170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5331;AVGPOST=0.9944;RSQ=0.9914;ERATE=0.0011;THETA=0.0014;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 31367171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0769;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 31367174 . ATGAG A 232 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8462;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31367210 rs35634718 AGT A 6526 PASS INDEL;BAVGPOST=0.995;BRSQ=0.958;LDAF=0.0687;AVGPOST=0.9835;RSQ=0.9069;ERATE=0.0057;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 31367228 . AGT A 341 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0064;AVGPOST=0.9961;RSQ=0.7671;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31367262 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0376;AVGPOST=0.9937;RSQ=0.9340;ERATE=0.0009;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 31367266 . GGTGA G 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31367298 . GT G 499 PASS INDEL;BAVGPOST=0.923;BRSQ=0.373;LDAF=0.0824;AVGPOST=0.9025;RSQ=0.5271;ERATE=0.0034;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 31367301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.750;LDAF=0.0194;AVGPOST=0.9905;RSQ=0.8061;ERATE=0.0009;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31367360 . TGA T 866 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0111;AVGPOST=0.9963;RSQ=0.8556;ERATE=0.0005;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31367380 . A AGT 11645 PASS INDEL;BAVGPOST=0.985;BRSQ=0.936;LDAF=0.1335;AVGPOST=0.9598;RSQ=0.8739;ERATE=0.0082;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 31367386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7239;AVGPOST=0.9931;RSQ=0.9873;ERATE=0.0009;THETA=0.0013;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 31367445 . GGTGT G 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5940;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31367448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0971;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 31367456 . ATGAGTG A 623 PASS INDEL;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8621;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31367485 . GGT G 9787 PASS INDEL;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0779;AVGPOST=0.9971;RSQ=0.9856;ERATE=0.0004;THETA=0.0023;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 31367488 rs10665246 G GTA 99 PASS INDEL;BAVGPOST=0.991;BRSQ=0.533;LDAF=0.0179;AVGPOST=0.9780;RSQ=0.4855;ERATE=0.0045;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31367519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.3625;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31367524 . ACT A 1616 PASS INDEL;BAVGPOST=0.798;BRSQ=0.689;LDAF=0.3427;AVGPOST=0.8352;RSQ=0.7826;ERATE=0.0046;THETA=0.0003;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 31367530 rs10578427 AGT A 13130 PASS INDEL;BAVGPOST=0.846;BRSQ=0.764;LDAF=0.3969;AVGPOST=0.8493;RSQ=0.8048;ERATE=0.0205;THETA=0.0002;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 31367548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0429;AVGPOST=0.9991;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31367626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31367678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31367744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0582;AVGPOST=0.9983;RSQ=0.9894;ERATE=0.0006;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 31367749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0965;AVGPOST=0.9983;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 31367798 . CCTGTCT C 1259 PASS INDEL;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7266;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31367918 . CCA C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7725;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31367929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8020;AVGPOST=0.9968;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 31367970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5311;AVGPOST=0.9960;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 31367971 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.545;LDAF=0.0095;AVGPOST=0.9885;RSQ=0.5367;ERATE=0.0030;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31367976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9091;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31367980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.918;LDAF=0.0718;AVGPOST=0.9897;RSQ=0.9477;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 31367996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31368008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.7761;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31368118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31368366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7364;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31368489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.948;LDAF=0.1228;AVGPOST=0.9827;RSQ=0.9472;ERATE=0.0007;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 31368684 rs35411668 GA G 557 PASS INDEL;BAVGPOST=0.987;BRSQ=0.835;LDAF=0.0437;AVGPOST=0.9858;RSQ=0.8781;ERATE=0.0009;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 31368688 rs35214484 CG C 575 PASS INDEL;BAVGPOST=0.987;BRSQ=0.834;LDAF=0.0400;AVGPOST=0.9913;RSQ=0.9196;ERATE=0.0008;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 31368691 rs35845663 GTA G 741 PASS INDEL;BAVGPOST=0.987;BRSQ=0.832;LDAF=0.0410;AVGPOST=0.9861;RSQ=0.8671;ERATE=0.0009;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31368731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0094;AVGPOST=0.9882;RSQ=0.5234;ERATE=0.0010;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31368744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.545;LDAF=0.0061;AVGPOST=0.9932;RSQ=0.5675;ERATE=0.0009;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31368831 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0565;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 31368844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4609;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31368883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7720;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31369290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0111;AVGPOST=0.9971;RSQ=0.8937;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31369513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0560;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 31369553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9425;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31369606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6268;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31369695 . A AG 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31369700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31369726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0745;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 31369879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8193;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31369929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8029;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31369979 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31370092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31370188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6677;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31370271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31370335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31370411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8328;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31370446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31370554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9286;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31370571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.940;LDAF=0.1579;AVGPOST=0.9772;RSQ=0.9397;ERATE=0.0006;THETA=0.0005;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 31370599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31370604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0420;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 31370664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8196;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31370695 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31370710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8689;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31370776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31370831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31370847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31370941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4808;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31371089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0421;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 31371103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31371110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31371172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7403;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31371204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8125;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31371292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31371444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4688;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31371497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0421;AVGPOST=0.9984;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 31371686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5934;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31371848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31371870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31371881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31371928 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0424;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0024;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 31371934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4937;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31372046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.919;LDAF=0.5014;AVGPOST=0.9626;RSQ=0.9441;ERATE=0.0060;THETA=0.0006;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 31372291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.395;LDAF=0.0038;AVGPOST=0.9941;RSQ=0.4057;ERATE=0.0013;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31372376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31372393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7158;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31372429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5503;AVGPOST=0.9931;RSQ=0.9892;ERATE=0.0008;THETA=0.0008;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 31372464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0041;AVGPOST=0.9960;RSQ=0.5719;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31372497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8777;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31372509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5260;AVGPOST=0.9923;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=1147;AN=2184 GT:DS:GL:BD 0.52518314 1
1 31372679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7723;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31372686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.1051;AVGPOST=0.9973;RSQ=0.9880;ERATE=0.0003;THETA=0.0041;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 31372713 . GC G 883 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0185;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31372734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1288;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 31372771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31372774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6856;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31372935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31373273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0194;AVGPOST=0.9987;RSQ=0.9714;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31373493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6496;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31373677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4094;ERATE=0.0005;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31374181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8665;ERATE=0.0004;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31374326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31374426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31374436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31374476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31374481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.7466;AVGPOST=0.9864;RSQ=0.9733;ERATE=0.0006;THETA=0.0024;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 31374657 . TG T 718 PASS INDEL;BAVGPOST=0.814;BRSQ=0.396;LDAF=0.1889;AVGPOST=0.8083;RSQ=0.5178;ERATE=0.0272;THETA=0.0037;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 31374680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7743;ERATE=0.0003;THETA=0.0109;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31374746 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31374974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31375036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0003;THETA=0.0087;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31375121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.725;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7355;ERATE=0.0004;THETA=0.0060;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31375159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0065;AVGPOST=0.9969;RSQ=0.8363;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31375202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.658;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.6914;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31375223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.928;LDAF=0.0626;AVGPOST=0.9844;RSQ=0.9077;ERATE=0.0010;THETA=0.0029;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 31375312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3820;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31375569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.901;LDAF=0.0551;AVGPOST=0.9869;RSQ=0.9014;ERATE=0.0007;THETA=0.0103;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 31375626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8842;ERATE=0.0004;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31375651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.646;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.6005;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31375762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6434;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31375965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0004;THETA=0.0235;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31376031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8711;ERATE=0.0003;THETA=0.0116;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31376148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9150;ERATE=0.0003;THETA=0.0054;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31376254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.884;LDAF=0.0293;AVGPOST=0.9922;RSQ=0.8954;ERATE=0.0008;THETA=0.0011;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31376320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0212;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31376377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8843;ERATE=0.0005;THETA=0.0028;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31376434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0123;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31376458 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6636;ERATE=0.0007;THETA=0.0164;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31376580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7338;ERATE=0.0004;THETA=0.0095;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31376588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0346;AVGPOST=0.9947;RSQ=0.9453;ERATE=0.0003;THETA=0.0091;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 31376869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.828;LDAF=0.0411;AVGPOST=0.9875;RSQ=0.8718;ERATE=0.0012;THETA=0.0193;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 31376954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8292;ERATE=0.0007;THETA=0.0086;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31376986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.862;LDAF=0.0136;AVGPOST=0.9964;RSQ=0.8999;ERATE=0.0004;THETA=0.0115;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31377211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.411;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0005;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31377257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.6940;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31377322 . A AT 135 PASS INDEL;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6238;ERATE=0.0007;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31377524 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5059;ERATE=0.0004;THETA=0.0118;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31377565 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8655;ERATE=0.0003;THETA=0.0141;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31377646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9632;ERATE=0.0003;THETA=0.0033;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31377647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7709;ERATE=0.0009;THETA=0.0107;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31377683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31377743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.958;LDAF=0.7107;AVGPOST=0.9777;RSQ=0.9611;ERATE=0.0005;THETA=0.0075;AC=1550;AN=2184 GT:DS:GL:BD 0.70970696 1
1 31377822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6176;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31377916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.477;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8809;ERATE=0.0003;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31377957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0162;AVGPOST=0.9968;RSQ=0.9234;ERATE=0.0004;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31377972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31377975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.934;LDAF=0.4416;AVGPOST=0.9493;RSQ=0.9289;ERATE=0.0024;THETA=0.0116;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 31378028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8973;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31378183 . CGTA C 153 PASS INDEL;BAVGPOST=0.975;BRSQ=0.223;LDAF=0.0440;AVGPOST=0.9388;RSQ=0.4209;ERATE=0.0038;THETA=0.0028;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 31378211 . C CAA 136 PASS INDEL;BAVGPOST=0.954;BRSQ=0.306;LDAF=0.0702;AVGPOST=0.9101;RSQ=0.4567;ERATE=0.0054;THETA=0.0121;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 31378277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.5948;ERATE=0.0005;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31378286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.0808;AVGPOST=0.9886;RSQ=0.9503;ERATE=0.0006;THETA=0.0038;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 31378320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9714;ERATE=0.0003;THETA=0.0039;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31378385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8737;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31378417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31378494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3705;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31378518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7679;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31378604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0141;AVGPOST=0.9982;RSQ=0.9591;ERATE=0.0003;THETA=0.0036;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31378834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0181;AVGPOST=0.9983;RSQ=0.9619;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31378834 rs71028729 A ACG 1423 PASS INDEL;BAVGPOST=0.946;BRSQ=0.602;LDAF=0.0855;AVGPOST=0.9298;RSQ=0.6475;ERATE=0.0103;THETA=0.0082;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 31378867 . GTCCCTGCCCT G 607 PASS INDEL;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8627;ERATE=0.0004;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31378949 . GATCTAACCTC G 1017 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9273;ERATE=0.0003;THETA=0.0058;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31378965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3480;AVGPOST=0.9936;RSQ=0.9896;ERATE=0.0003;THETA=0.0009;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 31379000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4167;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31379129 . CCCA C 188 PASS INDEL;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5734;ERATE=0.0007;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31379144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31379288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31379301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1669;AVGPOST=0.9919;RSQ=0.9786;ERATE=0.0003;THETA=0.0009;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 31379445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0486;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 31379472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31379567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5360;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31379599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31379689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.3933;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31379863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9242;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31380004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0153;AVGPOST=0.9991;RSQ=0.9755;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31380129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0195;AVGPOST=0.9988;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 31380174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6948;AVGPOST=0.9960;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=1517;AN=2184 GT:DS:GL:BD 0.69459707 1
1 31380183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0452;AVGPOST=0.9979;RSQ=0.9830;ERATE=0.0005;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31380293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31380332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31380498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31380696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2370;AVGPOST=0.9943;RSQ=0.9887;ERATE=0.0006;THETA=0.0002;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 31380703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31381104 . A AG 12 PASS INDEL;BAVGPOST=0.989;BRSQ=0.125;LDAF=0.0452;AVGPOST=0.9268;RSQ=0.3133;ERATE=0.0051;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31381106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.861;LDAF=0.1624;AVGPOST=0.9683;RSQ=0.9149;ERATE=0.0011;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 31381123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.865;LDAF=0.7588;AVGPOST=0.9125;RSQ=0.8194;ERATE=0.0069;THETA=0.0003;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 31381582 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.025;LDAF=0.1202;AVGPOST=0.8255;RSQ=0.3557;ERATE=0.0052;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 31381674 . C CG 2215 PASS INDEL;BAVGPOST=0.834;BRSQ=0;LDAF=0.9327;AVGPOST=0.9142;RSQ=0.5106;ERATE=0.0015;THETA=0.0005;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 31381684 . GC G 2244 PASS INDEL;BAVGPOST=0.847;BRSQ=0.005;LDAF=0.9642;AVGPOST=0.9407;RSQ=0.3431;ERATE=0.0015;THETA=0.0003;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 31381700 . GC G 2336 PASS INDEL;BAVGPOST=0.894;BRSQ=0;LDAF=0.9386;AVGPOST=0.9070;RSQ=0.3665;ERATE=0.0048;THETA=0.0004;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 31381704 . CA C 730 PASS INDEL;BAVGPOST=0.567;BRSQ=0.022;LDAF=0.7232;AVGPOST=0.6305;RSQ=0.2135;ERATE=0.0271;THETA=0.0005;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 31381718 . CG C 2942 PASS INDEL;BAVGPOST=0.929;BRSQ=0;LDAF=0.9426;AVGPOST=0.9151;RSQ=0.4316;ERATE=0.0015;THETA=0.0004;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 31381726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.815;BRSQ=0.535;LDAF=0.2626;AVGPOST=0.8638;RSQ=0.7478;ERATE=0.0066;THETA=0.0011;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31382082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8600;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31382105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9308;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31382136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0497;AVGPOST=0.9941;RSQ=0.9578;ERATE=0.0004;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 31382158 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31382296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31382447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31382501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9662;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31382622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5628;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31382631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31382692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5129;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31382708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0069;AVGPOST=0.9976;RSQ=0.8691;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31382743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7816;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31382825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9805;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31382965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0159;AVGPOST=0.9984;RSQ=0.9534;ERATE=0.0004;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31383043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0200;AVGPOST=0.9957;RSQ=0.9086;ERATE=0.0007;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31383247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9994;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31383345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6640;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31383397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2828;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 31383429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7881;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 31383546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31383634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31383668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31383682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31383734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7673;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31383742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8165;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31383840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31383848 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8737;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31383853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31383854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7104;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0004;THETA=0.0007;AC=1550;AN=2184 GT:DS:GL:BD 0.70970696 1
1 31383878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31383899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31383926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31383970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8291;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31384077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0379;AVGPOST=0.9967;RSQ=0.9665;ERATE=0.0005;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 31384079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31384130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31384197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31384330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31384382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3058;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 31384477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31384506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7641;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31384833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9320;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31384972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0217;AVGPOST=0.9990;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31384988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8652;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31385022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8706;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31385027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9504;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31385073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 31385093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31385155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31385187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7115;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=1553;AN=2184 GT:DS:GL:BD 0.71108061 1
1 31385238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2368;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 31385247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31385251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0221;AVGPOST=0.9982;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 31385347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6430;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31385393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31385530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31385632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3684;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31385657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6599;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31385708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9534;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31385911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9229;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31385925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31385954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8667;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31385963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0449;AVGPOST=0.9977;RSQ=0.9781;ERATE=0.0005;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 31385984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0237;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0004;THETA=0.0056;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31386061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7143;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31386125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31386173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4839;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31386217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4503;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31386484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1245;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 31386607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.489;LDAF=0.0051;AVGPOST=0.9942;RSQ=0.5609;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31386702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.480;LDAF=0.0247;AVGPOST=0.9713;RSQ=0.5441;ERATE=0.0066;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31386703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9608;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31386805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8102;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31386850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31386946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31386999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7089;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31387026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31387144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9621;ERATE=0.0004;THETA=0.0039;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31387235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7699;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31387330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2282;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0009;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 31387337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31387356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31387384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2692;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31387387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31387424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31387497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1194;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 31387550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31387684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31387701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3477;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 31387718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7737;AVGPOST=0.9967;RSQ=0.9924;ERATE=0.0006;THETA=0.0003;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 31387831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31387925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4774;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31387965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1193;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0013;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 31388168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0076;AVGPOST=0.9981;RSQ=0.9029;ERATE=0.0005;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31388176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.1105;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31388211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31388230 . T TC 377 PASS INDEL;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7216;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31388495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31388513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9466;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31388559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3465;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 31388564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.7594;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 31388585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3484;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0005;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 31388660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0130;AVGPOST=0.9974;RSQ=0.9247;ERATE=0.0006;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31388664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6192;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31388704 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2276;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0008;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 31388786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.929;LDAF=0.0766;AVGPOST=0.9947;RSQ=0.9716;ERATE=0.0004;THETA=0.0006;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 31388818 rs113704986 T TTTGTTG 7099 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0244;AVGPOST=0.9979;RSQ=0.9727;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 31388874 . A AGT 1517 PASS INDEL;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0156;AVGPOST=0.9981;RSQ=0.9532;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31388899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31388918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0243;AVGPOST=0.9984;RSQ=0.9765;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 31388956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31389026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0215;AVGPOST=0.9969;RSQ=0.9497;ERATE=0.0005;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 31389090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6285;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31389109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0098;AVGPOST=0.9976;RSQ=0.9041;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31389122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0236;AVGPOST=0.9947;RSQ=0.9242;ERATE=0.0006;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31389226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0481;AVGPOST=0.9979;RSQ=0.9805;ERATE=0.0006;THETA=0.0032;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 31389238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0171;AVGPOST=0.9950;RSQ=0.8774;ERATE=0.0008;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31389259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4479;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31389403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.9032;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31389410 . AG A 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8408;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31389415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0139;AVGPOST=0.9972;RSQ=0.9208;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31389573 . AATT A 93 PASS INDEL;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7948;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31389665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0046;AVGPOST=0.9927;RSQ=0.3619;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31389772 . A AT 190 PASS INDEL;BAVGPOST=0.896;BRSQ=0.252;LDAF=0.1531;AVGPOST=0.7910;RSQ=0.3470;ERATE=0.0202;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 31389837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.889;LDAF=0.7188;AVGPOST=0.9055;RSQ=0.8246;ERATE=0.0121;THETA=0.0006;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 31389844 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0060;AVGPOST=0.9958;RSQ=0.7705;ERATE=0.0007;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31389903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3648;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31389934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7093;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31389988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0223;AVGPOST=0.9983;RSQ=0.9646;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31390011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0090;AVGPOST=0.9967;RSQ=0.8319;ERATE=0.0006;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31390045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6939;AVGPOST=0.9898;RSQ=0.9817;ERATE=0.0013;THETA=0.0001;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 31390263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0169;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31390478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0245;AVGPOST=0.9973;RSQ=0.9508;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31390491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0085;AVGPOST=0.9952;RSQ=0.7710;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31390563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5522;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31390587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31390645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31390654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31390709 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31390734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6110;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31390782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9459;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31390800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31390844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31390907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31390916 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 31390921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31390961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8506;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31391010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3640;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 31391032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31391134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6197;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31391157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9714;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31391292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6731;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31391442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0246;AVGPOST=0.9861;RSQ=0.7636;ERATE=0.0017;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31391461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0171;AVGPOST=0.9984;RSQ=0.9535;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31391582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8497;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31391644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31391645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6099;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31391653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1380;AVGPOST=0.9944;RSQ=0.9811;ERATE=0.0008;THETA=0.0014;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 31391709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.5906;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31391761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1199;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 31391828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31391846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31391860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1550;AVGPOST=0.9971;RSQ=0.9914;ERATE=0.0004;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 31392142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31392160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7559;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31392291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31392321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7967;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31392429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31392443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31392451 rs34338895 C CG 50145 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3707;AVGPOST=0.9954;RSQ=0.9922;ERATE=0.0010;THETA=0.0003;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 31392610 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0448;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 31392621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31392687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0318;AVGPOST=0.9956;RSQ=0.9459;ERATE=0.0004;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 31392727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0155;AVGPOST=0.9979;RSQ=0.9583;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31392746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7783;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31392834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.9892;AVGPOST=0.9958;RSQ=0.8577;ERATE=0.0005;THETA=0.0004;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 31392911 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6715;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31392959 . GA G 5439 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0455;AVGPOST=0.9979;RSQ=0.9816;ERATE=0.0003;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31392960 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31393178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 31393185 . C CT 263 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5027;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31393227 . C CA 97 PASS INDEL;BAVGPOST=0.997;BRSQ=0.491;LDAF=0.0112;AVGPOST=0.9851;RSQ=0.4830;ERATE=0.0016;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31393314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.640;LDAF=0.0053;AVGPOST=0.9978;RSQ=0.8124;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31393322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0133;AVGPOST=0.9941;RSQ=0.8257;ERATE=0.0006;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31393343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0098;AVGPOST=0.9978;RSQ=0.9121;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31393349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.8951;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31393364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.769;LDAF=0.0131;AVGPOST=0.9954;RSQ=0.8558;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31393400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0208;AVGPOST=0.9925;RSQ=0.8698;ERATE=0.0006;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31393417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7422;AVGPOST=0.9948;RSQ=0.9891;ERATE=0.0008;THETA=0.0010;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 31393551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9606;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31393575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31393613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9529;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31393657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7114;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31393770 . TATG T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4997;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31393845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31393905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31393918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31393960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31393979 . TAA T 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31394177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0308;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31394195 rs59091385 CAT C 16320 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1198;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0008;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 31394202 rs34079692 CT C 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5748;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31394211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6145;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31394246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5804;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31394280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0315;AVGPOST=0.9990;RSQ=0.9851;ERATE=0.0004;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 31394332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0306;AVGPOST=0.9971;RSQ=0.9654;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 31394481 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0047;AVGPOST=0.9954;RSQ=0.6038;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31394482 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9611;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31394587 . TATATATAG T 554 PASS INDEL;BAVGPOST=0.994;BRSQ=0.555;LDAF=0.0118;AVGPOST=0.9901;RSQ=0.6925;ERATE=0.0009;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31394595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0138;AVGPOST=0.9960;RSQ=0.8830;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31394605 . TATATAGA T 350 PASS INDEL;BAVGPOST=0.974;BRSQ=0.280;LDAF=0.0895;AVGPOST=0.8682;RSQ=0.3850;ERATE=0.0089;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 31394611 . GA G 455 PASS INDEL;BAVGPOST=0.996;BRSQ=0.851;LDAF=0.0164;AVGPOST=0.9975;RSQ=0.9331;ERATE=0.0006;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31394869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.4882;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31394966 rs113265440 GA G 340 PASS INDEL;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31394980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31394984 . A AT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3724;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31395172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0468;AVGPOST=0.9984;RSQ=0.9859;ERATE=0.0004;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 31395198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1199;AVGPOST=0.9958;RSQ=0.9853;ERATE=0.0008;THETA=0.0007;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 31395324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7424;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31395334 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6664;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31395337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9544;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31395393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0176;AVGPOST=0.9963;RSQ=0.9184;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 31395431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1207;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0004;THETA=0.0005;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 31395458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.873;LDAF=0.0307;AVGPOST=0.9893;RSQ=0.8884;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 31395649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6839;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31395669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31395690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1969;AVGPOST=0.9971;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 31395762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0207;AVGPOST=0.9975;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31395876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3885;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31395940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9781;ERATE=0.0004;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31396026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5539;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31396033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31396081 . A AG 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7006;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31396102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31396195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31396430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7019;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31396470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.922;LDAF=0.0278;AVGPOST=0.9980;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31396499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9702;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31396735 . T TA 1615 PASS INDEL;BAVGPOST=0.989;BRSQ=0.858;LDAF=0.0426;AVGPOST=0.9854;RSQ=0.8618;ERATE=0.0018;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 31396744 rs80134585 AT A 122 PASS INDEL;BAVGPOST=0.993;BRSQ=0.521;LDAF=0.0147;AVGPOST=0.9878;RSQ=0.6817;ERATE=0.0012;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31396855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31396860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4749;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31396925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0101;AVGPOST=0.9952;RSQ=0.8023;ERATE=0.0009;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31396925 . TG T 460 PASS INDEL;BAVGPOST=0.995;BRSQ=0.795;LDAF=0.0147;AVGPOST=0.9970;RSQ=0.9222;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31396947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0133;AVGPOST=0.9957;RSQ=0.8711;ERATE=0.0006;THETA=0.0040;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31396962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9964;RSQ=0.7196;ERATE=0.0008;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31396989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.2798;AVGPOST=0.9600;RSQ=0.9311;ERATE=0.0041;THETA=0.0005;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 31397154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0171;AVGPOST=0.9982;RSQ=0.9520;ERATE=0.0006;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31397222 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0152;AVGPOST=0.9982;RSQ=0.9497;ERATE=0.0006;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31397231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0180;AVGPOST=0.9949;RSQ=0.8820;ERATE=0.0010;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31397502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.625;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7397;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31397547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4521;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31397701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31397729 rs112445750 CTTTTTA C 750 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9970;RSQ=0.8868;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31397824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7810;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31397864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6463;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31397971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31397981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31398030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9991;RSQ=0.9800;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31398150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31398167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31398210 . ATT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.5018;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31398211 . TTTAAC T 161 PASS INDEL;BAVGPOST=0.967;BRSQ=0.183;LDAF=0.0583;AVGPOST=0.9200;RSQ=0.4646;ERATE=0.0019;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 31398231 . TTTTA T 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4187;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31398342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.907;LDAF=0.7765;AVGPOST=0.9730;RSQ=0.9426;ERATE=0.0011;THETA=0.0003;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 31398348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.952;LDAF=0.3225;AVGPOST=0.9797;RSQ=0.9658;ERATE=0.0009;THETA=0.0006;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 31398373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0049;AVGPOST=0.9943;RSQ=0.5317;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31398389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31398520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.891;LDAF=0.0370;AVGPOST=0.9932;RSQ=0.9258;ERATE=0.0006;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 31398521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6491;ERATE=0.0013;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31398566 . TG T 1998 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9981;RSQ=0.9493;ERATE=0.0004;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31398692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31398837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0203;AVGPOST=0.9925;RSQ=0.8642;ERATE=0.0007;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31398917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31399134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0162;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31399255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0225;AVGPOST=0.9979;RSQ=0.9594;ERATE=0.0006;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 31399315 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.659;LDAF=0.0163;AVGPOST=0.9906;RSQ=0.7799;ERATE=0.0006;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31399421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9210;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31399523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31399745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.843;LDAF=0.2570;AVGPOST=0.9112;RSQ=0.8199;ERATE=0.0196;THETA=0.0005;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 31399747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.847;LDAF=0.0295;AVGPOST=0.9931;RSQ=0.9149;ERATE=0.0005;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 31399790 . GTA G 315 PASS INDEL;BAVGPOST=0.982;BRSQ=0.513;LDAF=0.0449;AVGPOST=0.9457;RSQ=0.5154;ERATE=0.0075;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 31399792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.551;LDAF=0.0985;AVGPOST=0.8972;RSQ=0.5245;ERATE=0.0286;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 31399801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0112;AVGPOST=0.9907;RSQ=0.6812;ERATE=0.0011;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31399824 . A ATG 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0105;AVGPOST=0.9972;RSQ=0.9043;ERATE=0.0007;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31399837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4398;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31399845 . C CAT 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5176;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31399853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0152;AVGPOST=0.9940;RSQ=0.8614;ERATE=0.0007;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31399879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7615;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31399931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31399935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31400003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7299;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31400046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.5424;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31400050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4886;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31400098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8974;ERATE=0.0004;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31400401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31400415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31400700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6783;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31400832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7842;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31400835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31400890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31401001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0045;AVGPOST=0.9932;RSQ=0.4612;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31401029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0160;AVGPOST=0.9982;RSQ=0.9522;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 31401077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8786;ERATE=0.0005;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31401082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31401084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5166;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31401101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8425;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31401106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31401110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0118;AVGPOST=0.9958;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31401150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.884;LDAF=0.0193;AVGPOST=0.9944;RSQ=0.8756;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31401207 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3399;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31401221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8234;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31401242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0309;AVGPOST=0.9966;RSQ=0.9582;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 31401282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0004;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 31401305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.6682;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31401368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7660;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31401558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31401689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31401906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7965;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31402040 . TGA T 1179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8417;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31402059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6585;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31402148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7226;AVGPOST=0.9967;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 31402468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31402569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0164;AVGPOST=0.9993;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31402570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31402628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31402731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9109;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31402732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31402739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31402777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31402895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8744;ERATE=0.0003;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31403015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9392;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31403047 . CAG C 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7878;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31403091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8350;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31403344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31403532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31403547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0049;AVGPOST=0.9968;RSQ=0.7494;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31403592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0748;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31403688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.6072;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31403711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7114;AVGPOST=0.9950;RSQ=0.9906;ERATE=0.0009;THETA=0.0005;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 31403713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9056;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31403731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6409;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31403767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0145;AVGPOST=0.9979;RSQ=0.9436;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31403891 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9698;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31404040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31404063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31404230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0068;AVGPOST=0.9975;RSQ=0.8527;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31404237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9818;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 31404295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0036;AVGPOST=0.9948;RSQ=0.4951;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31404322 . TG T 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0038;AVGPOST=0.9962;RSQ=0.6315;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31404634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31405112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8361;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31405176 . A AG 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5895;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31405250 . A AT 279 PASS INDEL;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0250;AVGPOST=0.9791;RSQ=0.6870;ERATE=0.0035;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31405291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6814;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31405404 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0465;AVGPOST=0.9962;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 31405485 . A ATT 57 PASS INDEL;BAVGPOST=0.869;BRSQ=0.009;LDAF=0.1103;AVGPOST=0.8505;RSQ=0.4005;ERATE=0.0049;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 31405511 rs59244838 TA T 2718 PASS INDEL;BAVGPOST=0.762;BRSQ=0.522;LDAF=0.3703;AVGPOST=0.7351;RSQ=0.5342;ERATE=0.0331;THETA=0.0008;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 31405643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1290;AVGPOST=0.9974;RSQ=0.9902;ERATE=0.0006;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 31405736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6335;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31405937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31406219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31406228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31406250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31406326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31406331 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0156;AVGPOST=0.9932;RSQ=0.8289;ERATE=0.0075;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31406388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31406410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31406465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8442;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31406500 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9018;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31406568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1231;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 31406592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8732;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31406629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6619;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31406695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31406707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31406732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2229;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 31406747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31406882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0264;AVGPOST=0.9910;RSQ=0.8753;ERATE=0.0014;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31407222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31407314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.916;LDAF=0.0527;AVGPOST=0.9950;RSQ=0.9608;ERATE=0.0004;THETA=0.0011;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 31407512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31407531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8930;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31407536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31407550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0193;AVGPOST=0.9988;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31407591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6932;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31407680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0336;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 31407711 . CAT C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6403;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31407755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31407844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31407874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8868;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31407945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31408024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31408056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7929;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 31408106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2052;AVGPOST=0.9965;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 31408199 . CG C 2555 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9990;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31408242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31408437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6881;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31409112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4011;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31409228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31409473 . T TGC 1186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31409483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31409502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31409629 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.658;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.7096;ERATE=0.0050;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31409634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31409643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31409726 . CCT C 31683 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1620;AVGPOST=0.9968;RSQ=0.9905;ERATE=0.0006;THETA=0.0003;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 31409770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31409784 . A AG 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0028;AVGPOST=0.9958;RSQ=0.4551;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31409898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3502;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 31410036 . G GA 404 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31410095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8285;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31410098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31410170 . G GA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31410351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0062;AVGPOST=0.9968;RSQ=0.8047;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31410441 . AT A 526 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0192;AVGPOST=0.9926;RSQ=0.8479;ERATE=0.0009;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31410541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4254;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31410560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31410565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31410577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31410638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8643;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31410667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5084;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31410708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.6888;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31410744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31410746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9287;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31410901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31410915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3446;AVGPOST=0.9960;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 31411092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9283;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31411297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31411508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9350;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31411583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0138;AVGPOST=0.9959;RSQ=0.8870;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31411674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.678;LDAF=0.1371;AVGPOST=0.9047;RSQ=0.6635;ERATE=0.0553;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 31411680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31411910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7150;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31411960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31412072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31412077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31412148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9346;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31412255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7536;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31412408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31412431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31412656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0047;AVGPOST=0.9937;RSQ=0.4849;ERATE=0.0014;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31412720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0107;AVGPOST=0.9953;RSQ=0.8253;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31412729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31412812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9754;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31412878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8076;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31412919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1232;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 31412929 . A AC 331 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.5964;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31412984 . TTC T 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5082;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31413077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4764;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31413192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9073;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31413197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6833;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31413243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.767;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8002;ERATE=0.0006;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31413307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7776;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31413310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31413314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31413376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31413504 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31413627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31413648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7465;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=1631;AN=2184 GT:DS:GL:BD 0.74679488 1
1 31413761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31413873 rs3838988 C CT 1118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9989;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31413925 . AATAAG A 902 PASS INDEL;BAVGPOST=0.995;BRSQ=0.785;LDAF=0.0074;AVGPOST=0.9982;RSQ=0.9038;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31413972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1229;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 31414020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31414418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31414425 . CAG C 526 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.8986;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31414442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31414455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5469;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31414462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1970;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 31414555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31414721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31414769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31414837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9003;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31414838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8959;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31414968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31414986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0011;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31414992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31414995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31415039 rs72137948 TA T 542 PASS INDEL;BAVGPOST=0.907;BRSQ=0.328;LDAF=0.1481;AVGPOST=0.8369;RSQ=0.5040;ERATE=0.0110;THETA=0.0008;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 31415040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3505;AVGPOST=0.9947;RSQ=0.9902;ERATE=0.0040;THETA=0.0005;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 31415237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31415251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9303;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31415545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31415602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8723;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31415620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31415654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31415933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31415943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31415966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0144;AVGPOST=0.9963;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 31416064 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31416066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31416068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31416151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4280;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.491;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6306;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31416388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0042;AVGPOST=0.9953;RSQ=0.5571;ERATE=0.0012;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31416389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4286;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31416634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1563;AVGPOST=0.9951;RSQ=0.9868;ERATE=0.0005;THETA=0.0002;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 31416888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31416906 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9517;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 31416918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8848;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31417024 . AT A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31417084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8589;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31417210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7230;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31417250 . AAAAC A 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0061;AVGPOST=0.9908;RSQ=0.4296;ERATE=0.0016;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31417304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1972;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 31417404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31417458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3697;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0010;THETA=0.0005;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 31417530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31417711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31417806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7178;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31417838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2195;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 31417911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 31417944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7739;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31417991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7721;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31418119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1970;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 31418454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31418487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31418538 . CAAT C 4694 PASS INDEL;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0239;AVGPOST=0.9975;RSQ=0.9595;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 31418668 . T TTA 318 PASS INDEL;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7090;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31418774 . A AGGTGTG 920 PASS INDEL;BAVGPOST=0.997;BRSQ=0.788;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8506;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31418925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31418928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5661;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31419183 . A AT 1424 PASS INDEL;BAVGPOST=0.979;BRSQ=0.653;LDAF=0.0281;AVGPOST=0.9874;RSQ=0.8189;ERATE=0.0009;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31419202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2006;AVGPOST=0.9936;RSQ=0.9862;ERATE=0.0008;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 31419282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0237;AVGPOST=0.9931;RSQ=0.8968;ERATE=0.0009;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 31419314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.380;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5979;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31419433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.933;LDAF=0.7658;AVGPOST=0.9529;RSQ=0.9052;ERATE=0.0066;THETA=0.0004;AC=1695;AN=2184 GT:DS:GL:BD 0.77609891 1
1 31419555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6060;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31419622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6217;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31419639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31419687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0039;AVGPOST=0.9952;RSQ=0.5981;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31419778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31419809 . TATG T 174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4930;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31419839 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9314;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31419887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2242;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0005;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 31419926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7205;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31419979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9600;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31419983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31420158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31420314 . C CT 1909 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31420408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31420605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31420845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9178;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31421189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31421242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1242;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 31421250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31421314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31421324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7458;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 31421420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8019;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31421588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9438;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31422443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8130;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31422505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9973;RSQ=0.8709;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 31422702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7446;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31422713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1969;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 31422799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2851;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 31422976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31423007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31423103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31423116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31423167 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6184;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31423207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31423305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31423361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0103;AVGPOST=0.9986;RSQ=0.9442;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 31423373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31423381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31423410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0163;AVGPOST=0.9986;RSQ=0.9636;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 31423620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31423701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.8915;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31423758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 31423790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31423903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8766;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31423904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31424056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7572;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31424118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31424177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31424195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2849;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 31424224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8027;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31424379 . C CTGG 345 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7009;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31424471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.0769;AVGPOST=0.9939;RSQ=0.9694;ERATE=0.0012;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 31424502 . GA G 188 PASS INDEL;BAVGPOST=0.962;BRSQ=0.733;LDAF=0.0894;AVGPOST=0.9288;RSQ=0.6706;ERATE=0.0038;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 31424503 rs68070467 AG A 8432 PASS INDEL;BAVGPOST=0.989;BRSQ=0.941;LDAF=0.0970;AVGPOST=0.9758;RSQ=0.9010;ERATE=0.0062;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 31424506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.951;LDAF=0.0430;AVGPOST=0.9947;RSQ=0.9580;ERATE=0.0027;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 31424519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31424523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31424590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1987;AVGPOST=0.9969;RSQ=0.9927;ERATE=0.0011;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 31424628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31424710 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31424889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5730;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 31424960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31425271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31425285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31425372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31425498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7743;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31425521 rs71719392 CGGGGGGGGCGG C 4373 PASS INDEL;BAVGPOST=0.562;BRSQ=0.239;LDAF=0.4602;AVGPOST=0.7353;RSQ=0.5937;ERATE=0.0241;THETA=0.0002;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 31425533 . G GA 689 PASS INDEL;BAVGPOST=0.594;BRSQ=0.116;LDAF=0.3512;AVGPOST=0.6219;RSQ=0.2821;ERATE=0.0352;THETA=0.0006;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 31425780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9958;RSQ=0.9107;ERATE=0.0006;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31425850 . C CA 4133 PASS INDEL;BAVGPOST=0.992;BRSQ=0.889;LDAF=0.0363;AVGPOST=0.9953;RSQ=0.9445;ERATE=0.0008;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31425912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31425932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31426014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7162;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5130;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6490;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31426161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0138;AVGPOST=0.9978;RSQ=0.9347;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31426213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7721;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31426225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31426235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31426545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31426638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3625;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0007;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 31426971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31426972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31427006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9712;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31427050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 31427300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31427461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6884;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31427541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31427646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9986;RSQ=0.9676;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 31427707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31427786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8288;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31427848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7920;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31427921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31427936 . AC A 46 PASS INDEL;BAVGPOST=0.997;BRSQ=0.603;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5608;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31428074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.418;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6931;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31428147 . C CA 1965 PASS INDEL;BAVGPOST=0.684;BRSQ=0.331;LDAF=0.3542;AVGPOST=0.6983;RSQ=0.4432;ERATE=0.0340;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 31428175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.780;LDAF=0.2162;AVGPOST=0.9059;RSQ=0.7946;ERATE=0.0129;THETA=0.0006;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 31428214 . TG T 457 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8582;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31428218 . GC G 477 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0076;AVGPOST=0.9960;RSQ=0.7953;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31428261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0199;AVGPOST=0.9956;RSQ=0.9250;ERATE=0.0005;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31428291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.501;LDAF=0.0169;AVGPOST=0.9861;RSQ=0.6784;ERATE=0.0010;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31428348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4952;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31428384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.9002;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 31428513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9984;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31428517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31428571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31428597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9362;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31428639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9498;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31428674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31428723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0362;AVGPOST=0.9979;RSQ=0.9782;ERATE=0.0006;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 31428852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7370;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 31428864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31429034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31429054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0066;AVGPOST=0.9980;RSQ=0.8813;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 31429095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8909;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31429099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31429232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0050;AVGPOST=0.9950;RSQ=0.6497;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31429260 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1971;AVGPOST=0.9865;RSQ=0.9699;ERATE=0.0031;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 31429268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5849;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31429354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1245;AVGPOST=0.9947;RSQ=0.9825;ERATE=0.0006;THETA=0.0005;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 31429374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9978;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31429403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.419;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4401;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31429407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9984;RSQ=0.9570;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 31429539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31429563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31429645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8417;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31429774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8585;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31429785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1972;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 31429839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31429999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5886;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31430149 . G GA 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4485;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31430178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4506;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31430242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31430261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5621;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31430285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6989;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31430362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1215;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 31430432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2412;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 31430539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31430542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8011;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31430601 . G GA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31430722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31430927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6139;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31431068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31431076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1227;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 31431148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5601;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31431176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7903;AVGPOST=0.9945;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 31431295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9272;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31431366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5999;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31431375 . G GT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4622;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31431419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0030;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 31431564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7934;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31431584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31431625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8454;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31431645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31431658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31431842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6148;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31432237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31432329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0189;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31432426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5113;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31432551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.6246;ERATE=0.0011;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31432595 . AT A 676 PASS INDEL;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8525;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31432677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9342;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31432780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8854;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31432889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31432923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0096;AVGPOST=0.9985;RSQ=0.9429;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31433104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.6951;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31433249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9295;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31433294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7947;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31433328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31433329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31433451 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31433511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3865;AVGPOST=0.9931;RSQ=0.9887;ERATE=0.0013;THETA=0.0002;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 31433515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31433544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31433709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0003;THETA=0.0031;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31433714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31433725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0201;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31433796 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7681;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31433844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.797;LDAF=0.0159;AVGPOST=0.9959;RSQ=0.9057;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31433896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6786;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31434107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6560;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31434154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7454;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31434169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7985;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31434348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9361;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31434383 . CG C 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6337;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31434420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31434633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9363;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 31434662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31434764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1988;AVGPOST=0.9976;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 31434787 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8342;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31434876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31435076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31435076 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3647;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31435127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8039;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31435245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6727;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31435246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31435323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31435448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7488;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31435510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1219;AVGPOST=0.9952;RSQ=0.9839;ERATE=0.0007;THETA=0.0005;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 31435720 . G GA 89 PASS INDEL;BAVGPOST=0.994;BRSQ=0.525;LDAF=0.0123;AVGPOST=0.9846;RSQ=0.5207;ERATE=0.0034;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 31435724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8695;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31435772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.927;LDAF=0.0574;AVGPOST=0.9952;RSQ=0.9663;ERATE=0.0003;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 31435940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31435944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 31435949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7247;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31436022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436223 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6152;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31436324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5513;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31436561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31436843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8801;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31436928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5484;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31436937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6678;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31437102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31437158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31437374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31437410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31437446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31437503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31437727 . C CG 40 PASS INDEL;BAVGPOST=0.974;BRSQ=0.295;LDAF=0.0461;AVGPOST=0.9302;RSQ=0.3665;ERATE=0.0082;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31437829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31437964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9402;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31438054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8849;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31438127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31438268 . TTTTG T 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31438303 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31438543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31438545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3613;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 31438615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 31438670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31438738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31438872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31438884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31439065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0006;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31439150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31439246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31439280 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1219;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 31439284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31439292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1220;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 31439312 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31439684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9268;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 31439688 rs59269080 A ATTATC 2905 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9985;RSQ=0.9678;ERATE=0.0006;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31439860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 31439891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 31439900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31439942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31440099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440212 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31440263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31440278 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440310 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7440;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 31440468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31440603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9793;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31440608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5742;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31440652 . ACAT A 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31440729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0274;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 31440773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31440904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31440921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7910;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 31440970 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441312 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31441495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441531 . CTTACT C 387 PASS INDEL;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7576;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31441599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31441650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31441850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4258;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31441888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0351;AVGPOST=0.9949;RSQ=0.9403;ERATE=0.0006;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 31441889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0120;AVGPOST=0.9941;RSQ=0.8254;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 31441917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4041;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31441980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0219;AVGPOST=0.9988;RSQ=0.9738;ERATE=0.0005;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 31442023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9699;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 31442036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 31442097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0197;AVGPOST=0.9980;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 31442184 . G GA 10044 PASS INDEL;BAVGPOST=0.846;BRSQ=0.209;LDAF=0.8120;AVGPOST=0.7493;RSQ=0.3232;ERATE=0.0330;THETA=0.0005;AC=1935;AN=2184 GT:DS:GL:BD 0.88598901 1
1 31442489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8898;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31442515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4649;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31442749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7428;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31442772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.784;LDAF=0.0144;AVGPOST=0.9948;RSQ=0.8599;ERATE=0.0005;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 31442864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8652;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31442985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 31443003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31443095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0287;AVGPOST=0.9973;RSQ=0.9673;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31443212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31443252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7241;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 31443269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 31443319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31443342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 31443383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31443524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31443558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8680;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31443612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.8015;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 31443681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8578;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 31443696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31444068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31444200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7354;AVGPOST=0.9943;RSQ=0.9891;ERATE=0.0004;THETA=0.0002;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 31444281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 31444388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31444576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.7132;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31444644 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5593;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 31444732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31444746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 31444801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0286;AVGPOST=0.9980;RSQ=0.9714;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 31444820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5297;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31444829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.6014;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 31445066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0051;AVGPOST=0.9955;RSQ=0.6287;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 31445101 . GAAAGA G 1217 PASS INDEL;BAVGPOST=0.745;BRSQ=0.453;LDAF=0.2300;AVGPOST=0.8694;RSQ=0.7410;ERATE=0.0038;THETA=0.0015;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 31445105 . GAA G 905 PASS INDEL;BAVGPOST=0.788;BRSQ=0.534;LDAF=0.2174;AVGPOST=0.8515;RSQ=0.6813;ERATE=0.0047;THETA=0.0008;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 31445109 . A AG 653 PASS INDEL;BAVGPOST=0.941;BRSQ=0.702;LDAF=0.1173;AVGPOST=0.9334;RSQ=0.7683;ERATE=0.0027;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 31445111 . A AGG 9139 PASS INDEL;BAVGPOST=0.877;BRSQ=0.752;LDAF=0.3106;AVGPOST=0.9327;RSQ=0.8924;ERATE=0.0006;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 31445114 . AGAAGGGAAGGGAAGG A 6629 PASS INDEL;BAVGPOST=0.761;BRSQ=0.607;LDAF=0.5922;AVGPOST=0.7508;RSQ=0.6264;ERATE=0.0224;THETA=0.0046;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 31445118 . G GA 995 PASS INDEL;BAVGPOST=0.776;BRSQ=0.449;LDAF=0.2452;AVGPOST=0.8163;RSQ=0.6366;ERATE=0.0075;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 31445121 . A AG 978 PASS INDEL;BAVGPOST=0.774;BRSQ=0.444;LDAF=0.2579;AVGPOST=0.8290;RSQ=0.6730;ERATE=0.0079;THETA=0.0006;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 31445292 . AGG A 1410 PASS INDEL;BAVGPOST=0.878;BRSQ=0.561;LDAF=0.1962;AVGPOST=0.8578;RSQ=0.6830;ERATE=0.0079;THETA=0.0007;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 31445301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.595;LDAF=0.2697;AVGPOST=0.7623;RSQ=0.5146;ERATE=0.0397;THETA=0.0022;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 31445313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0238;AVGPOST=0.9791;RSQ=0.6946;ERATE=0.0013;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 31445314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.516;LDAF=0.1968;AVGPOST=0.8290;RSQ=0.6108;ERATE=0.0179;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 31445318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0206;AVGPOST=0.9941;RSQ=0.8700;ERATE=0.0009;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 31445440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0029;AVGPOST=0.9958;RSQ=0.4808;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 31445486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.935;LDAF=0.1302;AVGPOST=0.9909;RSQ=0.9703;ERATE=0.0008;THETA=0.0009;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 31445568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.584;LDAF=0.0125;AVGPOST=0.9862;RSQ=0.5918;ERATE=0.0013;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 31445670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.5103;AVGPOST=0.9860;RSQ=0.9817;ERATE=0.0030;THETA=0.0043;AC=1122;AN=2184 GT:DS:GL:BD 0.51373625 1
1 31445799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.372;LDAF=0.9021;AVGPOST=0.8817;RSQ=0.4824;ERATE=0.0179;THETA=0.0005;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 31445932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7435;AVGPOST=0.9958;RSQ=0.9918;ERATE=0.0004;THETA=0.0002;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 31446051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0265;AVGPOST=0.9973;RSQ=0.9650;ERATE=0.0005;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 31446069 . TG T 10734 PASS INDEL;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1913;AVGPOST=0.9878;RSQ=0.9724;ERATE=0.0011;THETA=0.0002;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 31446103 . A AAC 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0034;AVGPOST=0.9945;RSQ=0.3497;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0