> summary(AncestMat) #SNPs #Nea #Ref #Alt Min. : 9.00 Min. : 0.00 Min. : 0 Min. : 0.000 1st Qu.: 9.00 1st Qu.: 9.00 1st Qu.: 8 1st Qu.: 0.000 Median : 10.00 Median : 10.00 Median : 9 Median : 1.000 Mean : 14.47 Mean : 13.98 Mean : 12 Mean : 1.881 3rd Qu.: 14.00 3rd Qu.: 14.00 3rd Qu.: 13 3rd Qu.: 2.000 Max. :266.00 Max. :264.00 Max. :180 Max. :82.000 #New NeaR RefR AltR Min. :0.00000 Min. :0.0000 Min. :0.0000 Min. :0.0000 1st Qu.:0.00000 1st Qu.:1.0000 1st Qu.:0.8125 1st Qu.:0.0000 Median :0.00000 Median :1.0000 Median :0.8958 Median :0.1000 Mean :0.09087 Mean :0.9694 Mean :0.8696 Mean :0.1162 3rd Qu.:0.00000 3rd Qu.:1.0000 3rd Qu.:1.0000 3rd Qu.:0.1667 Max. :7.00000 Max. :1.0000 Max. :1.0000 Max. :1.0000 NewR xAltCon xRefCon mAltCon Min. :0.000000 Min. : 0.000 Min. : 0.000 Min. : 0.000 1st Qu.:0.000000 1st Qu.: 0.000 1st Qu.: 1.000 1st Qu.: 0.000 Median :0.000000 Median : 0.000 Median : 1.000 Median : 0.000 Mean :0.006358 Mean : 1.305 Mean : 1.015 Mean : 1.402 3rd Qu.:0.000000 3rd Qu.: 2.000 3rd Qu.: 1.000 3rd Qu.: 2.000 Max. :1.000000 Max. :45.000 Max. :13.000 Max. :45.000 mRefCon NeaPosC AltPosC RefPosC Min. : 0.000 Min. : 7.0 Min. : 0 Min. : 0 1st Qu.: 1.000 1st Qu.: 984.2 1st Qu.: 0 1st Qu.: 1095 Median : 1.091 Median : 1493.5 Median : 0 Median : 1669 Mean : 1.129 Mean : 1635.3 Mean : 2319 Mean : 1954 3rd Qu.: 1.167 3rd Qu.: 2130.0 3rd Qu.: 1882 3rd Qu.: 2434 Max. :13.000 Max. :39758.0 Max. :505045 Max. :301216 > > > format(colSums(AncestMat),scientific=FALSE) #SNPs #Nea #Ref #Alt #New " 2406864.000" " 2324992.000" " 1996881.000" " 312993.000" " 15118.000" NeaR RefR AltR NewR xAltCon " 161277.019" " 144670.005" " 19328.264" " 1057.731" " 217138.000" xRefCon mAltCon mRefCon NeaPosC AltPosC " 168860.000" " 233239.589" " 187806.422" "272050917.000" "385876505.000" RefPosC "324997543.500"