1092
10000
1 104507149 . CATATT C 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4038;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104507181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8575;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104507219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.9023;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104507245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4508;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104507251 . GA G 367 PASS INDEL;BAVGPOST=0.987;BRSQ=0.789;LDAF=0.0382;AVGPOST=0.9917;RSQ=0.9062;ERATE=0.0010;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 104507379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.762;LDAF=0.0368;AVGPOST=0.9791;RSQ=0.7954;ERATE=0.0013;THETA=0.0010;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 104507403 . A ATC 1219 PASS INDEL;BAVGPOST=0.972;BRSQ=0.675;LDAF=0.0407;AVGPOST=0.9803;RSQ=0.8089;ERATE=0.0012;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104507403 . ATATATC A 1091 PASS INDEL;BAVGPOST=0.917;BRSQ=0.478;LDAF=0.1373;AVGPOST=0.8427;RSQ=0.4627;ERATE=0.0194;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 104507405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.778;LDAF=0.0707;AVGPOST=0.9513;RSQ=0.7324;ERATE=0.0042;THETA=0.0014;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 104507407 . A ATC 2285 PASS INDEL;BAVGPOST=0.967;BRSQ=0.744;LDAF=0.0826;AVGPOST=0.9363;RSQ=0.6934;ERATE=0.0045;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 104507407 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0340;AVGPOST=0.9973;RSQ=0.9727;ERATE=0.0004;THETA=0.0033;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104507481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9717;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104507604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0189;AVGPOST=0.9970;RSQ=0.9341;ERATE=0.0005;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104507612 . TTA T 50 PASS INDEL;BAVGPOST=0.984;BRSQ=0.536;LDAF=0.0250;AVGPOST=0.9750;RSQ=0.6122;ERATE=0.0028;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104507729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5016;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104507851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9982;RSQ=0.9609;ERATE=0.0002;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104507858 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6932;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104507961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104507963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1075;AVGPOST=0.9973;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 104508043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8404;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104508046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9765;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104508103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104508135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104508151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0502;AVGPOST=0.9964;RSQ=0.9710;ERATE=0.0003;THETA=0.0009;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104508184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104508197 . CA C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5046;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7899;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104508344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6490;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9778;AVGPOST=0.9977;RSQ=0.9627;ERATE=0.0003;THETA=0.0006;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 104508391 . G GC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6798;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104508535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7636;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104508559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0033;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104508573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7830;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104508643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104508653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9024;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104508656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7246;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104508660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7467;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8516;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104508679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5806;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5771;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104508824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104508841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6931;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104508941 . T TC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5200;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104508980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9982;RSQ=0.9559;ERATE=0.0005;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104509296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 104509311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9797;AVGPOST=0.9993;RSQ=0.9846;ERATE=0.0004;THETA=0.0043;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 104509504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9972;RSQ=0.9661;ERATE=0.0006;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104509513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0154;AVGPOST=0.9983;RSQ=0.9625;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104509564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7254;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104509605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104509626 . T TG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7418;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104509653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104509674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9053;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104509706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104509943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104510016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104510039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1321;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104510060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4557;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104510227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104510257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8143;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104510275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9087;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104510513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104510751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6264;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0009;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 104510850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8526;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104510925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6365;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 104510971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104510994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9139;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104511026 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.852;LDAF=0.3141;AVGPOST=0.9186;RSQ=0.8598;ERATE=0.0048;THETA=0.0006;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 104511584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.105;LDAF=0.8769;AVGPOST=0.8328;RSQ=0.3782;ERATE=0.0127;THETA=0.0007;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 104511592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.1761;AVGPOST=0.9873;RSQ=0.9638;ERATE=0.0011;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 104511627 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.8969;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104511667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.910;LDAF=0.0495;AVGPOST=0.9920;RSQ=0.9309;ERATE=0.0004;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 104511693 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104511787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104511828 . CT C 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4419;ERATE=0.0009;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104511836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6633;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104511935 . TG T 312 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9200;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104511970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104511973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104511976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0134;AVGPOST=0.9967;RSQ=0.9084;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104511997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9982;RSQ=0.9481;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104512015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1738;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 104512085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9493;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104512110 . AG A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0066;AVGPOST=0.9904;RSQ=0.4804;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104512153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8003;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104512155 . A AT 46 PASS INDEL;BAVGPOST=0.997;BRSQ=0.520;LDAF=0.0047;AVGPOST=0.9945;RSQ=0.5608;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104512207 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0359;AVGPOST=0.9950;RSQ=0.9463;ERATE=0.0004;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104512215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0077;AVGPOST=0.9954;RSQ=0.7581;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104512216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1308;AVGPOST=0.9954;RSQ=0.9845;ERATE=0.0005;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104512312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8638;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104512358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104512456 . C CA 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6210;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104512587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8964;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104512683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0123;AVGPOST=0.9985;RSQ=0.9522;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104512689 . ACT A 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7575;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104512894 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.4486;AVGPOST=0.9878;RSQ=0.9818;ERATE=0.0018;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 104512920 . T TA 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0093;AVGPOST=0.9947;RSQ=0.7782;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104513001 MERGED_DEL_2_6703 CTTATATATATATAATATATATAGTATATATACTATATATATTATATATATACTATATATATTATATATAGTGTGTATACTATATATATTATATATAGTGTGTATATATATATACACACACACACAAAGAGAGACTCTGACTGTGGCCACATATCCTAGTGAATTTCAGTACTATACATTTCAAGTTCCC C . . SV;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9166;ERATE=0.0003;THETA=0.0002;CIEND=-44;109;CIPOS=-91;66;END=195019758;HOMLEN=3;HOMSEQ=TTA;SOURCE=BreakDancer_195013811_1950197 GT:DS:GL:BD 0.00641026 0
1 104513014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0068;AVGPOST=0.9927;RSQ=0.5516;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104513015 . TTA T 9197 PASS INDEL;BAVGPOST=0.999;BRSQ=0;LDAF=0.9828;AVGPOST=0.9810;RSQ=0.5624;ERATE=0.0018;THETA=0.0006;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 104513015 rs35749467 AT A 7734 PASS INDEL;BAVGPOST=0.972;BRSQ=0.923;LDAF=0.2092;AVGPOST=0.9620;RSQ=0.9186;ERATE=0.0025;THETA=0.0003;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 104513034 . AG A 42 PASS INDEL;BAVGPOST=0.995;BRSQ=0.349;LDAF=0.0365;AVGPOST=0.9472;RSQ=0.4286;ERATE=0.0039;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104513036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.571;LDAF=0.0212;AVGPOST=0.9875;RSQ=0.7533;ERATE=0.0016;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104513038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.330;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3525;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104513044 . T TTA 127 PASS INDEL;BAVGPOST=0.990;BRSQ=0.277;LDAF=0.0366;AVGPOST=0.9610;RSQ=0.5748;ERATE=0.0020;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104513055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.483;LDAF=0.0071;AVGPOST=0.9904;RSQ=0.4695;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104513075 . C CTA 186 PASS INDEL;BAVGPOST=0.997;BRSQ=0.403;LDAF=0.0115;AVGPOST=0.9874;RSQ=0.5558;ERATE=0.0009;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104513093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3154;AVGPOST=0.9840;RSQ=0.9728;ERATE=0.0008;THETA=0.0002;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 104513126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6017;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104513146 . ACT A 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9963;RSQ=0.7167;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104513147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0962;AVGPOST=0.9979;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 104513180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0205;AVGPOST=0.9946;RSQ=0.8936;ERATE=0.0006;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104513357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0050;AVGPOST=0.9959;RSQ=0.6622;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104513433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2002;AVGPOST=0.9950;RSQ=0.9890;ERATE=0.0004;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 104513529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0174;AVGPOST=0.9988;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104513536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4535;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 104513555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0212;AVGPOST=0.9965;RSQ=0.9322;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104513593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6849;ERATE=0.0012;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104513607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8640;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104513619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9574;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104513788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1337;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 104513793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6021;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104514049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.6121;AVGPOST=0.9677;RSQ=0.9505;ERATE=0.0053;THETA=0.0007;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 104514229 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.5777;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104514239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.6485;ERATE=0.0012;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104514472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6740;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104514495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9569;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104514563 . GTA G 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0096;AVGPOST=0.9912;RSQ=0.6342;ERATE=0.0016;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104514563 . CAA C 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6901;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104514657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104514699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6167;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 104514714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5618;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104514783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104514834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9026;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104514882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4261;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104514930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6676;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104514982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6175;AVGPOST=0.9936;RSQ=0.9901;ERATE=0.0009;THETA=0.0008;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 104515024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515036 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515108 . TC T 21776 PASS INDEL;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.5471;AVGPOST=0.9450;RSQ=0.9237;ERATE=0.0096;THETA=0.0002;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 104515109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.959;LDAF=0.5678;AVGPOST=0.9750;RSQ=0.9641;ERATE=0.0004;THETA=0.0002;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 104515110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.5671;AVGPOST=0.9747;RSQ=0.9637;ERATE=0.0004;THETA=0.0005;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 104515111 . T TTA 33978 PASS INDEL;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.5630;AVGPOST=0.9658;RSQ=0.9511;ERATE=0.0062;THETA=0.0002;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 104515111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8630;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0006;THETA=0.0011;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 104515201 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5209;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4805;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4739;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0090;AVGPOST=0.9964;RSQ=0.8411;ERATE=0.0008;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104515529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2124;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 104515620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1714;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 104515640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=0.9992;RSQ=0.9898;ERATE=0.0003;THETA=0.0012;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 104515688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515695 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104515775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9638;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104515776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104515802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7727;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104515832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4910;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104515839 . T TA 87 PASS INDEL;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7779;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104515900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1142;AVGPOST=0.9978;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 104516037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7139;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104516062 . GA G 1559 PASS INDEL;BAVGPOST=0.887;BRSQ=0.529;LDAF=0.1884;AVGPOST=0.8129;RSQ=0.4819;ERATE=0.0551;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 104516076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.724;LDAF=0.6469;AVGPOST=0.8433;RSQ=0.6678;ERATE=0.0865;THETA=0.0003;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 104516079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2619;AVGPOST=0.9925;RSQ=0.9862;ERATE=0.0008;THETA=0.0004;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 104516263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104516272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0250;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104516285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6709;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104516301 . TA T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104516493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104516510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104516649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104516733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104516814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6765;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104516955 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104516963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6944;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104517025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104517280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4747;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104517364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1077;AVGPOST=0.9979;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104517365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7874;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104517427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1344;AVGPOST=0.9938;RSQ=0.9806;ERATE=0.0005;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 104517600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4770;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5114;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0133;AVGPOST=0.9957;RSQ=0.8757;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104517775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517779 . AT A 3923 PASS INDEL;BAVGPOST=0.994;BRSQ=0.918;LDAF=0.0335;AVGPOST=0.9979;RSQ=0.9725;ERATE=0.0004;THETA=0.0011;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104517869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104517894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9097;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104517958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4187;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518043 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9733;AVGPOST=0.9962;RSQ=0.9499;ERATE=0.0004;THETA=0.0002;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 104518083 . GT G 2754 PASS INDEL;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0421;AVGPOST=0.9952;RSQ=0.9569;ERATE=0.0008;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104518181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6265;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9160;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104518474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9626;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104518611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8636;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104518749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1728;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 104518758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104518800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5007;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104518828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3880;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104518997 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6839;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104519048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104519067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104519077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104519140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3593;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104519148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9175;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104519151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104519160 . CA C 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4315;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104519166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1658;AVGPOST=0.9971;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 104519194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3534;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 104519244 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104519309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6887;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104519363 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6910;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104519395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1731;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 104519533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104519563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104519801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9522;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104519831 . C CAT 1289 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0132;AVGPOST=0.9950;RSQ=0.8516;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104519851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.745;LDAF=0.0218;AVGPOST=0.9876;RSQ=0.7985;ERATE=0.0008;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104519905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.492;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5265;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104520024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9954;RSQ=0.8092;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104520056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.497;LDAF=0.0105;AVGPOST=0.9910;RSQ=0.6947;ERATE=0.0008;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104520112 rs71851833 AATATATTAT A 6563 PASS INDEL;BAVGPOST=0.830;BRSQ=0.458;LDAF=0.1879;AVGPOST=0.8587;RSQ=0.6422;ERATE=0.0082;THETA=0.0006;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 104520132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.301;LDAF=0.0817;AVGPOST=0.9063;RSQ=0.5104;ERATE=0.0035;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 104520147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.681;BRSQ=0.361;LDAF=0.3183;AVGPOST=0.7222;RSQ=0.4565;ERATE=0.0215;THETA=0.0024;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 104520160 . TTA T 923 PASS INDEL;BAVGPOST=0.838;BRSQ=0.147;LDAF=0.1406;AVGPOST=0.8489;RSQ=0.5172;ERATE=0.0072;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 104520172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.554;BRSQ=0.281;LDAF=0.4955;AVGPOST=0.6364;RSQ=0.3629;ERATE=0.0471;THETA=0.0005;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 104520194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.114;LDAF=0.1629;AVGPOST=0.7774;RSQ=0.3346;ERATE=0.0116;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 104520219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.560;BRSQ=0.233;LDAF=0.6414;AVGPOST=0.6804;RSQ=0.4461;ERATE=0.0301;THETA=0.0019;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 104520223 . TTA T 157 PASS INDEL;BAVGPOST=0.929;BRSQ=0.091;LDAF=0.1277;AVGPOST=0.8164;RSQ=0.3478;ERATE=0.0134;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 104520231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.536;BRSQ=0.092;LDAF=0.3703;AVGPOST=0.6600;RSQ=0.3349;ERATE=0.0295;THETA=0.0008;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 104520253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.503;BRSQ=0.119;LDAF=0.3527;AVGPOST=0.6866;RSQ=0.3836;ERATE=0.0246;THETA=0.0009;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 104520287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.127;LDAF=0.0642;AVGPOST=0.9090;RSQ=0.4045;ERATE=0.0044;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104520311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.701;BRSQ=0.123;LDAF=0.2824;AVGPOST=0.6773;RSQ=0.3043;ERATE=0.0298;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 104520321 rs67464127 ATATAT A 121 PASS INDEL;BAVGPOST=0.844;BRSQ=0.007;LDAF=0.0986;AVGPOST=0.8494;RSQ=0.3281;ERATE=0.0079;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104520328 rs67464127 AATATATTAT A 1258 PASS INDEL;BAVGPOST=0.861;BRSQ=0.112;LDAF=0.2023;AVGPOST=0.7282;RSQ=0.3250;ERATE=0.0171;THETA=0.0008;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 104520352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.239;LDAF=0.0231;AVGPOST=0.9770;RSQ=0.6075;ERATE=0.0013;THETA=0.0018;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104520391 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.772;LDAF=0.2935;AVGPOST=0.7965;RSQ=0.6035;ERATE=0.0193;THETA=0.0012;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 104520404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0044;AVGPOST=0.9941;RSQ=0.4862;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104520474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6842;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104520672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9569;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104520748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.655;LDAF=0.0207;AVGPOST=0.9855;RSQ=0.7234;ERATE=0.0011;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104520863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.791;LDAF=0.0099;AVGPOST=0.9960;RSQ=0.8446;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104520897 . TGGCGTCAACCCG T 1422 PASS INDEL;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0077;AVGPOST=0.9961;RSQ=0.7734;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104520949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2459;AVGPOST=0.9906;RSQ=0.9817;ERATE=0.0009;THETA=0.0009;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 104520953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.792;LDAF=0.0129;AVGPOST=0.9954;RSQ=0.8601;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104520956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9730;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104520990 . C CA 200 PASS INDEL;BAVGPOST=0.974;BRSQ=0.508;LDAF=0.0507;AVGPOST=0.9354;RSQ=0.4644;ERATE=0.0115;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104521035 . AAAAAAAAAC A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104521037 . C CA 186 PASS INDEL;BAVGPOST=0.992;BRSQ=0.504;LDAF=0.0170;AVGPOST=0.9760;RSQ=0.4545;ERATE=0.0037;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104521046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5534;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104521083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0141;AVGPOST=0.9975;RSQ=0.9221;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104521205 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0068;AVGPOST=0.9944;RSQ=0.6663;ERATE=0.0012;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104521207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104521368 . TG T 121 PASS INDEL;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0079;AVGPOST=0.9932;RSQ=0.6608;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104521471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.829;LDAF=0.0166;AVGPOST=0.9940;RSQ=0.8519;ERATE=0.0006;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104521522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104521523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6649;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104521549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4806;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104521578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0124;AVGPOST=0.9992;RSQ=0.9720;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104521630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6896;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104521696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5349;AVGPOST=0.9961;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 104521762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104521849 . TG T 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9090;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104521925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2436;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 104521939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104522037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7870;AVGPOST=0.9872;RSQ=0.9797;ERATE=0.0012;THETA=0.0006;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 104522088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0107;AVGPOST=0.9966;RSQ=0.8682;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104522138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6733;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104522284 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0180;AVGPOST=0.9896;RSQ=0.7968;ERATE=0.0010;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104522290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9631;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104522326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104522459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104522615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0365;AVGPOST=0.9989;RSQ=0.9870;ERATE=0.0004;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 104522716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8705;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104522769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0089;AVGPOST=0.9980;RSQ=0.9008;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104522777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6669;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104522872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104522894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104522920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8005;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0012;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 104522941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6742;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104522998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104523059 . T TA 213 PASS INDEL;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0092;AVGPOST=0.9915;RSQ=0.6781;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104523075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4544;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104523114 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104523137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104523165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7821;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104523317 . T TA 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5741;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104523409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7922;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0015;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 104523447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9849;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104523534 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0212;AVGPOST=0.9986;RSQ=0.9738;ERATE=0.0003;THETA=0.0014;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104523559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4886;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104523644 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9541;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104523659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104523682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9258;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104523715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.913;LDAF=0.0496;AVGPOST=0.9944;RSQ=0.9542;ERATE=0.0003;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104523744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9992;RSQ=0.9711;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104523970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104523980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2458;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0003;THETA=0.0009;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 104524049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104524090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104524099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0002;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104524185 . A AAT 262 PASS INDEL;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0099;AVGPOST=0.9910;RSQ=0.6443;ERATE=0.0025;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104524266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8959;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104524427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0171;AVGPOST=0.9982;RSQ=0.9563;ERATE=0.0004;THETA=0.0025;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104524489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104524594 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104524654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4597;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0006;THETA=0.0005;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 104524672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1525;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 104524774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8240;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104524776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9986;RSQ=0.9208;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104524860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7246;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104525007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9960;RSQ=0.4528;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104525018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9855;ERATE=0.0002;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104525209 . CT C 5839 PASS INDEL;BAVGPOST=0.882;BRSQ=0.803;LDAF=0.3187;AVGPOST=0.8986;RSQ=0.8562;ERATE=0.0038;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 104525231 . C CAGA 10679 PASS INDEL;BAVGPOST=0.888;BRSQ=0.816;LDAF=0.3234;AVGPOST=0.9033;RSQ=0.8666;ERATE=0.0037;THETA=0.0005;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 104525234 . T TAA 7595 PASS INDEL;BAVGPOST=0.887;BRSQ=0.814;LDAF=0.3095;AVGPOST=0.8685;RSQ=0.8069;ERATE=0.0101;THETA=0.0004;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 104525235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9573;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104525358 . TC T 207 PASS INDEL;BAVGPOST=0.963;BRSQ=0.425;LDAF=0.0663;AVGPOST=0.9176;RSQ=0.4743;ERATE=0.0124;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104525371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6305;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104525478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.4916;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104525493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7086;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104525502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2504;AVGPOST=0.9941;RSQ=0.9900;ERATE=0.0007;THETA=0.0005;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 104525529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5538;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104525676 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9430;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104525850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0107;AVGPOST=0.9969;RSQ=0.8909;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104526254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.913;LDAF=0.5859;AVGPOST=0.9309;RSQ=0.9100;ERATE=0.0109;THETA=0.0036;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 104526287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.827;LDAF=0.0169;AVGPOST=0.9926;RSQ=0.8377;ERATE=0.0005;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104526326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4445;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104526653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5886;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104526690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.913;LDAF=0.5806;AVGPOST=0.9199;RSQ=0.8926;ERATE=0.0126;THETA=0.0007;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 104526802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0073;AVGPOST=0.9977;RSQ=0.8909;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104526847 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.741;LDAF=0.1873;AVGPOST=0.9574;RSQ=0.9068;ERATE=0.0013;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 104526900 . CTT C 212 PASS INDEL;BAVGPOST=0.929;BRSQ=0.257;LDAF=0.0698;AVGPOST=0.9198;RSQ=0.5409;ERATE=0.0048;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 104527035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0120;AVGPOST=0.9947;RSQ=0.8059;ERATE=0.0010;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104527181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0200;AVGPOST=0.9991;RSQ=0.9805;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104527243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.950;LDAF=0.1786;AVGPOST=0.9857;RSQ=0.9619;ERATE=0.0016;THETA=0.0007;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 104527248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3518;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5632;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6866;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104527405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.955;LDAF=0.2390;AVGPOST=0.9870;RSQ=0.9780;ERATE=0.0012;THETA=0.0002;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 104527437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7679;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104527439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527522 . CAAG C 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9483;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104527787 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6325;AVGPOST=0.9929;RSQ=0.9907;ERATE=0.0008;THETA=0.0004;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 104527795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 104527847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8223;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104527861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104527898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9257;ERATE=0.0002;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104527941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2496;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 104527946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4547;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104527981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1779;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0004;THETA=0.0032;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 104528005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104528056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104528095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104528165 . AAC A 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6535;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104528201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104528208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2100;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 104528211 rs76535682 TTTA T 36204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2508;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 104528325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8911;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104528385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2493;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 104528386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8913;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104528489 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6387;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104528558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9590;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104528609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8008;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104528670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6809;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104528823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5159;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104528824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1766;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 104528828 . ATTC A 295 PASS INDEL;BAVGPOST=0.998;BRSQ=0.593;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7643;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104528984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0352;AVGPOST=0.9987;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104529029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6601;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104529115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104529155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4585;AVGPOST=0.9960;RSQ=0.9947;ERATE=0.0009;THETA=0.0009;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 104529176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4434;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104529265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.907;LDAF=0.0408;AVGPOST=0.9935;RSQ=0.9362;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104529312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6572;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104529431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9985;RSQ=0.9592;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104529443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104529512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2135;AVGPOST=0.9883;RSQ=0.9753;ERATE=0.0014;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 104529544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.6809;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104529568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.4555;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104529642 . GAGT G 350 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9922;RSQ=0.7005;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104529652 . AG A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104530023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104530177 . AAAAATAAACAG A 1004 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7736;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104530486 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104530518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9210;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104530627 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104530760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8080;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104530948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4743;AVGPOST=0.9921;RSQ=0.9875;ERATE=0.0006;THETA=0.0019;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 104530954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104531042 . TG T 454 PASS INDEL;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8002;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104531118 . G GT 285 PASS INDEL;BAVGPOST=0.974;BRSQ=0.565;LDAF=0.0427;AVGPOST=0.9545;RSQ=0.5504;ERATE=0.0100;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104531119 . TC T 1289 PASS INDEL;BAVGPOST=0.956;BRSQ=0.739;LDAF=0.0718;AVGPOST=0.9568;RSQ=0.7760;ERATE=0.0062;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 104531128 . CAT C 403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7639;ERATE=0.0005;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104531271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8327;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104531291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7800;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104531496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5946;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104531535 . G GA 13 PASS INDEL;BAVGPOST=0.989;BRSQ=0.502;LDAF=0.0158;AVGPOST=0.9793;RSQ=0.4871;ERATE=0.0043;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104531579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8185;ERATE=0.0005;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104531591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4790;AVGPOST=0.9837;RSQ=0.9743;ERATE=0.0008;THETA=0.0042;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 104531598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7989;ERATE=0.0005;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104531620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0339;AVGPOST=0.9976;RSQ=0.9718;ERATE=0.0004;THETA=0.0233;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104531766 . GT G 284 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.8740;ERATE=0.0003;THETA=0.0074;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104531791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8764;ERATE=0.0003;THETA=0.0085;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104531878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8847;ERATE=0.0003;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104531911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8532;ERATE=0.0003;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104531955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104531979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4489;ERATE=0.0005;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104532053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8692;ERATE=0.0003;THETA=0.0196;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104532104 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0198;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104532270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0182;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104532342 . A AC 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3543;ERATE=0.0009;THETA=0.0136;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104532368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0120;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104532377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9299;ERATE=0.0004;THETA=0.0110;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104532464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8583;ERATE=0.0004;THETA=0.0159;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104532508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0003;THETA=0.0228;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104532607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104532632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0136;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104532648 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8753;ERATE=0.0005;THETA=0.0108;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104533217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104533236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0115;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104533257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104533263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0005;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104533339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104533362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9615;ERATE=0.0003;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104533526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8851;ERATE=0.0005;THETA=0.0082;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104533527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104533651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104533779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104533782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6855;ERATE=0.0005;THETA=0.0174;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104534076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0149;AVGPOST=0.9983;RSQ=0.9518;ERATE=0.0003;THETA=0.0142;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104534160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5044;ERATE=0.0005;THETA=0.0151;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104534321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4714;ERATE=0.0004;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104534409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8738;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104534419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0705;AVGPOST=0.9923;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 104534466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104534635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104534715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104534804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0086;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104534819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5389;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104534864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7037;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 104535120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7731;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104535210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104535219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104535375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8515;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104535414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6510;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104535547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104535566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7009;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104535629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7431;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 104535736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2192;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 104535854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1421;AVGPOST=0.9950;RSQ=0.9901;ERATE=0.0004;THETA=0.0001;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 104535859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104535986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5787;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104536219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2956;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0006;THETA=0.0006;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 104536273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.829;LDAF=0.0262;AVGPOST=0.9918;RSQ=0.8892;ERATE=0.0004;THETA=0.0024;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104536291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0150;AVGPOST=0.9983;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104536423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4806;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104536437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9189;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104536448 . A AAG 53 PASS INDEL;BAVGPOST=0.987;BRSQ=0.393;LDAF=0.0354;AVGPOST=0.9500;RSQ=0.4352;ERATE=0.0057;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104536587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104536703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7428;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 104536891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0030;AVGPOST=0.9952;RSQ=0.4213;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104537007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7862;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104537117 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9981;RSQ=0.9443;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104537139 rs74793935 AC A 505 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8598;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104537384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104537427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104537531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.670;LDAF=0.0581;AVGPOST=0.9481;RSQ=0.6207;ERATE=0.0287;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104537566 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7984;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104537752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104537824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7242;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104537921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0502;AVGPOST=0.9992;RSQ=0.9939;ERATE=0.0004;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104538063 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0500;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104538066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7913;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104538083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1440;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0011;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 104538268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104538421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6980;AVGPOST=0.9948;RSQ=0.9885;ERATE=0.0015;THETA=0.0002;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 104538811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104538869 . C CA 59 PASS INDEL;BAVGPOST=0.981;BRSQ=0.518;LDAF=0.0359;AVGPOST=0.9550;RSQ=0.4974;ERATE=0.0098;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104538955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7004;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 104539022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0162;AVGPOST=0.9981;RSQ=0.9578;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104539112 . TTC T 513 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8634;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104539182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104539477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8477;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104539483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7010;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0010;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 104539600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0128;AVGPOST=0.9971;RSQ=0.9017;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104539608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104539690 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7924;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104539758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7003;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 104539804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104539828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0208;AVGPOST=0.9979;RSQ=0.9608;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104540045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7744;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104540111 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104540149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0095;AVGPOST=0.9973;RSQ=0.8971;ERATE=0.0008;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104540252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104540346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104540406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104540412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104540528 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0026;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104540630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540740 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104540765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104540767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9457;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104541289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104541394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0243;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0003;THETA=0.0017;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104541402 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5826;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104541429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8148;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104541837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104541855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104541969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104542013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104542355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7408;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104542390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6306;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104542505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104542509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104542631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8352;AVGPOST=0.9958;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 104542764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6502;ERATE=0.0009;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104542775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.5912;AVGPOST=0.9833;RSQ=0.9749;ERATE=0.0005;THETA=0.0003;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 104542822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104542824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7364;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104542880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104543122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104543363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104543389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104543506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104543585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0242;AVGPOST=0.9970;RSQ=0.9547;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104543632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6260;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104543849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4690;AVGPOST=0.9805;RSQ=0.9699;ERATE=0.0007;THETA=0.0007;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 104543990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6047;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104544201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7056;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104544450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0262;AVGPOST=0.9993;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104544451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0318;AVGPOST=0.9949;RSQ=0.9397;ERATE=0.0006;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104544496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7001;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104544514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7074;ERATE=0.0014;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104544586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104544689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104544736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0236;AVGPOST=0.9989;RSQ=0.9823;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104544776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8026;AVGPOST=0.9970;RSQ=0.9925;ERATE=0.0005;THETA=0.0003;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 104544777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8032;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 104544804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104544894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0026;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104544936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104544987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104545027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104545034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5917;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104545103 . ATG A 219 PASS INDEL;BAVGPOST=0.922;BRSQ=0.268;LDAF=0.0948;AVGPOST=0.8846;RSQ=0.5131;ERATE=0.0049;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 104545286 rs71142532 G GAA 4453 PASS INDEL;BAVGPOST=0.758;BRSQ=0.512;LDAF=0.2588;AVGPOST=0.8091;RSQ=0.6564;ERATE=0.0194;THETA=0.0008;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 104545288 . CAT C 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104545535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104545593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104545625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0154;AVGPOST=0.9988;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104545656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104545832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.8924;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104546065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.931;LDAF=0.4234;AVGPOST=0.9586;RSQ=0.9393;ERATE=0.0228;THETA=0.0005;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 104546173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104546196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8701;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104546455 . T TA 84 PASS INDEL;BAVGPOST=0.986;BRSQ=0.059;LDAF=0.0449;AVGPOST=0.9385;RSQ=0.4683;ERATE=0.0028;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104546705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8631;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104546720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104546744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104546995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104547050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5721;AVGPOST=0.9816;RSQ=0.9700;ERATE=0.0020;THETA=0.0007;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 104547319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4574;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104547334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9391;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104547350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4713;AVGPOST=0.9940;RSQ=0.9922;ERATE=0.0011;THETA=0.0008;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 104547622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.933;LDAF=0.0691;AVGPOST=0.9952;RSQ=0.9674;ERATE=0.0005;THETA=0.0009;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 104547811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104548020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104548021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1013;AVGPOST=0.9977;RSQ=0.9912;ERATE=0.0004;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104548237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6149;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104548476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0081;AVGPOST=0.9988;RSQ=0.9329;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104548606 . AT A 473 PASS INDEL;BAVGPOST=0.884;BRSQ=0.364;LDAF=0.1669;AVGPOST=0.8030;RSQ=0.4102;ERATE=0.0490;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 104548655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0354;AVGPOST=0.9981;RSQ=0.9788;ERATE=0.0004;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 104548669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1601;AVGPOST=0.9913;RSQ=0.9743;ERATE=0.0005;THETA=0.0006;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 104548692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4694;AVGPOST=0.9929;RSQ=0.9905;ERATE=0.0011;THETA=0.0004;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 104548758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4875;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 104548900 . T TG 45 PASS INDEL;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0143;AVGPOST=0.9826;RSQ=0.5147;ERATE=0.0034;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104548924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8680;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104549066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6058;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104549333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104549463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104549535 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3071;ERATE=0.0005;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104549595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9995;AVGPOST=0.9989;RSQ=0.0708;ERATE=0.0004;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 104549623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1012;AVGPOST=0.9981;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 104549660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104549923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8470;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104550018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.953;LDAF=0.5157;AVGPOST=0.9488;RSQ=0.9377;ERATE=0.0022;THETA=0.0005;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 104550050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104550079 . A AC 192 PASS INDEL;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7044;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104550221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9993;RSQ=0.9850;ERATE=0.0003;THETA=0.0022;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104550315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0664;AVGPOST=0.9972;RSQ=0.9837;ERATE=0.0005;THETA=0.0019;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 104550329 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6782;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104550367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2436;AVGPOST=0.9964;RSQ=0.9925;ERATE=0.0003;THETA=0.0012;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 104550390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9561;ERATE=0.0003;THETA=0.0036;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104550462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9803;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104550696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104550720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8378;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104550732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104550753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8675;ERATE=0.0004;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104550812 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8579;ERATE=0.0004;THETA=0.0050;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104550880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0198;AVGPOST=0.9985;RSQ=0.9742;ERATE=0.0003;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104550907 . A AT 120 PASS INDEL;BAVGPOST=0.994;BRSQ=0.644;LDAF=0.0097;AVGPOST=0.9911;RSQ=0.6255;ERATE=0.0017;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104551229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0342;AVGPOST=0.9950;RSQ=0.9422;ERATE=0.0005;THETA=0.0019;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104551252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104551413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0184;AVGPOST=0.9984;RSQ=0.9660;ERATE=0.0004;THETA=0.0017;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104551643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4344;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104551670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9241;ERATE=0.0004;THETA=0.0044;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104551734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0128;AVGPOST=0.9968;RSQ=0.9068;ERATE=0.0004;THETA=0.0035;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104551743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7827;ERATE=0.0004;THETA=0.0077;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104551822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.723;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7305;ERATE=0.0004;THETA=0.0146;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104551827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9347;ERATE=0.0004;THETA=0.0077;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104551928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0083;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104552048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8317;ERATE=0.0003;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104552064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0011;THETA=0.0061;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104552071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0600;AVGPOST=0.9943;RSQ=0.9635;ERATE=0.0021;THETA=0.0061;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 104552118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0098;AVGPOST=0.9980;RSQ=0.9107;ERATE=0.0008;THETA=0.0082;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104552159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104552162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0214;AVGPOST=0.9962;RSQ=0.9277;ERATE=0.0020;THETA=0.0057;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104552176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0004;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104552229 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4083;AVGPOST=0.9815;RSQ=0.9746;ERATE=0.0019;THETA=0.0077;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 104552417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9016;ERATE=0.0007;THETA=0.0018;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104552473 . CTTA C 208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7363;ERATE=0.0005;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104552518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104552559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9536;ERATE=0.0005;THETA=0.0060;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104552566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8146;ERATE=0.0026;THETA=0.0077;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104552714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8343;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104552778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7604;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104552915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5319;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104553112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5940;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104553117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104553282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3996;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104553411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4857;ERATE=0.0006;THETA=0.0080;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104553468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7197;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104553587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1826;AVGPOST=0.9925;RSQ=0.9806;ERATE=0.0006;THETA=0.0031;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 104553694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9277;ERATE=0.0005;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104553710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1836;AVGPOST=0.9953;RSQ=0.9877;ERATE=0.0005;THETA=0.0028;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 104553824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104553994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8145;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104554080 . CA C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0222;AVGPOST=0.9988;RSQ=0.9770;ERATE=0.0004;THETA=0.0016;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104554306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4997;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8529;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104554609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6200;ERATE=0.0008;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104554671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5825;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104554685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8629;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104554711 . CA C 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4308;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104554711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0128;AVGPOST=0.9984;RSQ=0.9591;ERATE=0.0004;THETA=0.0020;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104554759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104554975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104554998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0287;AVGPOST=0.9976;RSQ=0.9647;ERATE=0.0003;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104555038 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4739;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104555067 . AAT A 161 PASS INDEL;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6012;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104555123 . AACG A 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5668;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104555133 . G GTA 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3647;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104555259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104555368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9759;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104555487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7286;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104555575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.570;LDAF=0.0182;AVGPOST=0.9799;RSQ=0.5703;ERATE=0.0061;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104555594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6883;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104555630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104555756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0209;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104555905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104555919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104555991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5791;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104556021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104556026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0737;AVGPOST=0.9951;RSQ=0.9718;ERATE=0.0005;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 104556040 . G GT 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104556104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7679;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104556242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8397;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104556317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7654;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104556325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104556379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0156;AVGPOST=0.9984;RSQ=0.9635;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104556411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104556424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3230;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 104556511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5905;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104556585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7375;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104556602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6563;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104556823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3416;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 104556931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0275;AVGPOST=0.9978;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104556959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.556;LDAF=0.0096;AVGPOST=0.9879;RSQ=0.5244;ERATE=0.0022;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104556993 . TATC T 269 PASS INDEL;BAVGPOST=0.979;BRSQ=0.574;LDAF=0.0290;AVGPOST=0.9767;RSQ=0.6874;ERATE=0.0013;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104556993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.888;LDAF=0.0624;AVGPOST=0.9721;RSQ=0.8222;ERATE=0.0043;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 104556999 rs56970725 T TATC 1120 PASS INDEL;BAVGPOST=0.917;BRSQ=0.683;LDAF=0.1520;AVGPOST=0.9506;RSQ=0.8635;ERATE=0.0008;THETA=0.0004;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 104557002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2074;AVGPOST=0.9948;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 104557252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2154;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 104557408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4173;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104557438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104557454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2114;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 104557456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7769;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104557469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104557470 . CTT C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104557576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8244;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104557652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5551;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 104557680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104557684 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5569;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0006;THETA=0.0004;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 104557706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104557796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6206;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104557811 . GC G 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.5973;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104558023 . TTCAAGCAATTCTCCAGCC T 932 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.8845;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104558136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9081;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104558217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6884;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104558251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5672;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104558293 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1146;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 104558359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6342;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104558536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104558688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1145;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 104558846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104558859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5570;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 104558877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0109;AVGPOST=0.9954;RSQ=0.8449;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104558955 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5510;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0009;THETA=0.0003;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 104559394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104559418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3420;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 104559693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2057;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 104559735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7307;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104559766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5530;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104559796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0120;AVGPOST=0.9948;RSQ=0.8120;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104559812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6792;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104559854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.727;LDAF=0.0288;AVGPOST=0.9717;RSQ=0.6055;ERATE=0.0097;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104559976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0642;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 104560030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104560073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.698;LDAF=0.0122;AVGPOST=0.9929;RSQ=0.7738;ERATE=0.0007;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104560133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4754;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104560172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3103;AVGPOST=0.9949;RSQ=0.9901;ERATE=0.0006;THETA=0.0005;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 104560290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.472;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3654;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104560399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9719;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104560545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6126;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104560553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9979;RSQ=0.9517;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104560626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104560695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.879;LDAF=0.0332;AVGPOST=0.9935;RSQ=0.9247;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 104560700 . G GA 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104560762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104560855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0163;AVGPOST=0.9974;RSQ=0.9445;ERATE=0.0006;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104560957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8292;AVGPOST=0.9965;RSQ=0.9906;ERATE=0.0005;THETA=0.0004;AC=1810;AN=2184 GT:DS:GL:BD 0.82875460 1
1 104561114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8959;AVGPOST=0.9972;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 104561136 . AC A 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8889;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104561161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104561242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104561246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.464;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5548;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104561255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1662;AVGPOST=0.9831;RSQ=0.9539;ERATE=0.0038;THETA=0.0002;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 104561521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9338;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104561627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3122;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 104561660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104561719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6372;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104561837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0102;AVGPOST=0.9962;RSQ=0.8673;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104561911 . C CA 780 PASS INDEL;BAVGPOST=0.591;BRSQ=0.218;LDAF=0.3883;AVGPOST=0.7036;RSQ=0.4666;ERATE=0.0233;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 104561944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1268;AVGPOST=0.9971;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 104562000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0110;AVGPOST=0.9856;RSQ=0.4800;ERATE=0.0012;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104562022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104562104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104562274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0127;AVGPOST=0.9986;RSQ=0.9500;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104562344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4502;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104562528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1295;AVGPOST=0.9953;RSQ=0.9851;ERATE=0.0009;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 104562541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0138;AVGPOST=0.9984;RSQ=0.9508;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104562609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0140;AVGPOST=0.9980;RSQ=0.9385;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104562616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.7609;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104562655 . TC T 748 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0111;AVGPOST=0.9985;RSQ=0.9430;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104562675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0142;AVGPOST=0.9979;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104562711 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1566;AVGPOST=0.9956;RSQ=0.9880;ERATE=0.0006;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 104562726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.898;LDAF=0.4822;AVGPOST=0.9412;RSQ=0.9104;ERATE=0.0100;THETA=0.0009;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 104562799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104562843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9589;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104562898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104562918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7704;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104562932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.866;LDAF=0.0213;AVGPOST=0.9894;RSQ=0.7932;ERATE=0.0013;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104562953 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104563304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104563388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104563424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104563441 rs33998686 C CA 22907 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1590;AVGPOST=0.9980;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 104563484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104563521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5015;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104563593 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104563601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0530;AVGPOST=0.9976;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 104563617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104563821 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104563834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1422;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 104563846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5801;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104563854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.3203;AVGPOST=0.9910;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 104564047 . GT G 359 PASS INDEL;BAVGPOST=0.926;BRSQ=0.697;LDAF=0.1115;AVGPOST=0.9449;RSQ=0.8177;ERATE=0.0010;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 104564053 rs113677998 TA T 7698 PASS INDEL;BAVGPOST=0.964;BRSQ=0.870;LDAF=0.1522;AVGPOST=0.9918;RSQ=0.9780;ERATE=0.0007;THETA=0.0015;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 104564054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.659;LDAF=0.0233;AVGPOST=0.9800;RSQ=0.6934;ERATE=0.0015;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104564172 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.814;LDAF=0.0350;AVGPOST=0.9824;RSQ=0.8095;ERATE=0.0018;THETA=0.0027;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 104564232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0172;AVGPOST=0.9941;RSQ=0.8781;ERATE=0.0008;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104564279 rs71281133 G GA 9392 PASS INDEL;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1315;AVGPOST=0.9916;RSQ=0.9735;ERATE=0.0015;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 104564282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.763;LDAF=0.0117;AVGPOST=0.9910;RSQ=0.7034;ERATE=0.0009;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104564283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1279;AVGPOST=0.9977;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 104564430 . AC A 149 PASS INDEL;BAVGPOST=0.994;BRSQ=0.655;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7744;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104564462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104564464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9622;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104564560 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104564564 . GAC G 415 PASS INDEL;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7486;ERATE=0.0005;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104564584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0037;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104564777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104564941 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9639;ERATE=0.0004;THETA=0.0018;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104564974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8266;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104565117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3747;AVGPOST=0.9926;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 104565150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7198;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104565158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0511;AVGPOST=0.9989;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104565201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5671;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104565260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5284;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104565343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8622;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104565350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8254;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104565371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7077;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104565530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104565721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104566017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6722;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104566049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0311;AVGPOST=0.9986;RSQ=0.9832;ERATE=0.0005;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 104566135 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9166;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104566163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104566251 . CA C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5136;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104566452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8654;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104566490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104566505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5898;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104566605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0312;AVGPOST=0.9992;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 104566627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104566715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104566744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9746;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104566770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8261;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104566817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8135;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104566943 . AG A 70517 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5700;AVGPOST=0.9929;RSQ=0.9907;ERATE=0.0008;THETA=0.0003;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 104566984 . TC T 70271 PASS INDEL;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.5668;AVGPOST=0.9910;RSQ=0.9880;ERATE=0.0016;THETA=0.0003;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 104566990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0882;AVGPOST=0.9880;RSQ=0.9463;ERATE=0.0004;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 104567076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104567095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5103;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104567114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5729;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0006;THETA=0.0005;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 104567139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8141;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 104567223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104567354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8972;ERATE=0.0005;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104567454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7270;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104567525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7558;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104567849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7767;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104567886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104567930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568017 . TA T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5621;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8655;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104568056 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0072;AVGPOST=0.9893;RSQ=0.4332;ERATE=0.0022;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104568115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104568181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104568361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9990;RSQ=0.9791;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104568411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9433;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104568413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9996;RSQ=0.9838;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104568414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104568629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8876;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104568642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104568678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104568714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.729;LDAF=0.0495;AVGPOST=0.9559;RSQ=0.6357;ERATE=0.0120;THETA=0.0022;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104568934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0290;AVGPOST=0.9961;RSQ=0.9486;ERATE=0.0005;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104568969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.653;LDAF=0.0183;AVGPOST=0.9785;RSQ=0.5029;ERATE=0.0065;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104568983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8847;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104569065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104569119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1698;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 104569159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4022;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 104569322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0354;AVGPOST=0.9975;RSQ=0.9741;ERATE=0.0005;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104569377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8635;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104569418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569708 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6388;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104569963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104570014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104570032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0236;AVGPOST=0.9993;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570163 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9507;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104570289 . CTT C 1865 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0241;AVGPOST=0.9984;RSQ=0.9708;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104570452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104570632 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8707;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104570753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104570775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9986;RSQ=0.9788;ERATE=0.0003;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104570786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2161;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 104570823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0117;AVGPOST=0.9978;RSQ=0.9250;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104570839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104570884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8652;AVGPOST=0.9985;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 104570959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104571078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104571099 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104571114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104571122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104571141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104571227 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104571278 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104571287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104571486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9457;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104571574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104571581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9353;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104571672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6457;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104571724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6086;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 104571815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104571828 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6106;AVGPOST=0.9910;RSQ=0.9871;ERATE=0.0013;THETA=0.0007;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 104571881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.8903;AVGPOST=0.9924;RSQ=0.9733;ERATE=0.0007;THETA=0.0005;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 104571911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7092;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104571965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104571978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4736;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104572053 . C CA 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0045;AVGPOST=0.9954;RSQ=0.5625;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104572120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4151;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104572138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8190;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104572229 . CTCTT C 57559 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5161;AVGPOST=0.9917;RSQ=0.9890;ERATE=0.0009;THETA=0.0010;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 104572248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7791;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104572353 . AC A 1046 PASS INDEL;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0236;AVGPOST=0.9990;RSQ=0.9798;ERATE=0.0005;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104572419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104572582 . T TA 833 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0245;AVGPOST=0.9991;RSQ=0.9830;ERATE=0.0004;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104572630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0269;AVGPOST=0.9959;RSQ=0.9336;ERATE=0.0009;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104572679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0064;AVGPOST=0.9931;RSQ=0.5910;ERATE=0.0014;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104572750 . A AT 118 PASS INDEL;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.6491;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104572791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104572870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6293;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104573021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7624;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104573084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0077;AVGPOST=0.9975;RSQ=0.8919;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104573241 . T TA 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.504;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6166;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104573290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7252;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104573345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8679;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104573435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9703;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104573437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104573514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104573532 . GT G 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7782;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104573544 . T TC 1417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9812;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104573598 . G GCCC 2333 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0250;AVGPOST=0.9974;RSQ=0.9581;ERATE=0.0005;THETA=0.0012;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104573837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9386;ERATE=0.0003;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104573872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0237;AVGPOST=0.9991;RSQ=0.9826;ERATE=0.0004;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104573969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8654;AVGPOST=0.9972;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=1891;AN=2184 GT:DS:GL:BD 0.86584246 1
1 104573970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0826;AVGPOST=0.9973;RSQ=0.9861;ERATE=0.0004;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104573975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104574045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104574173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9095;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104574213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104574374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7646;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104574412 . CAT C 2246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0244;AVGPOST=0.9987;RSQ=0.9825;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104574436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0271;AVGPOST=0.9964;RSQ=0.9493;ERATE=0.0007;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104574445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104574471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5675;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104574706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104574731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8552;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104574772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104574862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104574964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104575069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.688;LDAF=0.0145;AVGPOST=0.9864;RSQ=0.6536;ERATE=0.0049;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104575093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0344;AVGPOST=0.9973;RSQ=0.9701;ERATE=0.0004;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 104575096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104575240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0066;AVGPOST=0.9938;RSQ=0.6646;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104575272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104575428 . TAA T 256 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104575576 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104575678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9853;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104576024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104576098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9286;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104576269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104576273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0055;AVGPOST=0.9948;RSQ=0.6419;ERATE=0.0013;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104576312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.938;LDAF=0.1004;AVGPOST=0.9884;RSQ=0.9509;ERATE=0.0007;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 104576795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9972;RSQ=0.8297;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104576833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0088;AVGPOST=0.9972;RSQ=0.8769;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104576907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7850;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104576967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0107;AVGPOST=0.9973;RSQ=0.8950;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104576988 . CA C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5730;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104577086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104577118 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104577137 . TA T 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5671;ERATE=0.0015;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104577268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104577302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104577341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4472;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 104577402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104577403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6966;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104577454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104577530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9982;RSQ=0.9602;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104577531 . TTG T 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7647;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104577580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8637;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104577643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.682;LDAF=0.0122;AVGPOST=0.9936;RSQ=0.7893;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104577779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8331;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104577953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2462;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 104578097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104578378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4507;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 104578464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9613;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104578473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104578753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104578816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104578843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8195;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104578860 . T TA 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6301;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104579004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6346;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104579027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0164;AVGPOST=0.9958;RSQ=0.8998;ERATE=0.0008;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104579176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104579356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8228;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104579406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6023;AVGPOST=0.9896;RSQ=0.9847;ERATE=0.0028;THETA=0.0004;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 104579443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0068;AVGPOST=0.9994;RSQ=0.9602;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104579468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0924;AVGPOST=0.9985;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 104579515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6533;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104579540 . GTAATGACA G 891 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9279;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104579560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0926;AVGPOST=0.9977;RSQ=0.9892;ERATE=0.0008;THETA=0.0033;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 104579640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0183;AVGPOST=0.9950;RSQ=0.8873;ERATE=0.0005;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104579679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0993;AVGPOST=0.9972;RSQ=0.9893;ERATE=0.0005;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104579757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.460;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5786;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104579821 . A AT 569 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0114;AVGPOST=0.9943;RSQ=0.8040;ERATE=0.0006;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104579879 . T TAAG 628 PASS INDEL;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0094;AVGPOST=0.9947;RSQ=0.7920;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104579882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104579998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8119;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104580030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9443;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104580183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0034;AVGPOST=0.9964;RSQ=0.6362;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104580191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104580197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0279;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104580237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8641;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104580256 . TA T 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6772;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104580321 . ATGT A 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4848;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104580625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104580664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1481;AVGPOST=0.9976;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 104580777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104581078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9042;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104581206 rs67376772 A AT 12101 PASS INDEL;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1500;AVGPOST=0.9872;RSQ=0.9571;ERATE=0.0009;THETA=0.0005;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 104581216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104581261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4570;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104581303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104581336 . TAGGC T 1704 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9323;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104581351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9833;ERATE=0.0004;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104581462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6878;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104581583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5514;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104581616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0839;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 104581691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7045;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104581754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104581755 . T TG 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0053;AVGPOST=0.9915;RSQ=0.3938;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104581844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9988;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104581925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.606;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6683;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104581938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.947;LDAF=0.1433;AVGPOST=0.9931;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 104581939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7710;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104581997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104582308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0002;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104582384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9144;AVGPOST=0.9965;RSQ=0.9823;ERATE=0.0003;THETA=0.0007;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 104582415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9413;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104582527 rs66734998 AC A 21830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1332;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 104582617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4554;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104582666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104582673 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0658;AVGPOST=0.9964;RSQ=0.9800;ERATE=0.0003;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 104582701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7735;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104582723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0931;AVGPOST=0.9985;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 104582775 . T TTAG 1508 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8471;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104582852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4262;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104582946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104583063 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8463;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104583306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104583356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104583448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104583585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104583641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104583667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6599;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104583796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2862;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 104583848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8180;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104583973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8039;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104584009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104584024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9783;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104584140 . CT C 144 PASS INDEL;BAVGPOST=0.985;BRSQ=0.459;LDAF=0.0373;AVGPOST=0.9517;RSQ=0.4979;ERATE=0.0060;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104584355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104584510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.5911;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104584543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7238;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104584827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9221;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104584831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6649;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104584860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2238;AVGPOST=0.9952;RSQ=0.9903;ERATE=0.0006;THETA=0.0004;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 104584912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9474;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104584916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0113;AVGPOST=0.9967;RSQ=0.8797;ERATE=0.0008;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104584957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104585006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1179;AVGPOST=0.9934;RSQ=0.9745;ERATE=0.0007;THETA=0.0005;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 104585037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5926;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104585123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104585180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104585222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8423;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104585274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1083;AVGPOST=0.9986;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104585284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104585364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5494;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104585446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6074;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104585511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104585596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1075;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104585638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6475;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104585792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3255;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 104585833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1560;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 104585866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104585924 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104585926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1558;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0006;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 104585946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104586043 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5417;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104586184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104586196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104586246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104586325 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104586499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7145;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104586519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104586531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104586569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7651;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104586571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0002;THETA=0.0020;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104586650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104586665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104586724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104586739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104586751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104587072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6299;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104587208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9285;ERATE=0.0002;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104587254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0114;AVGPOST=0.9980;RSQ=0.9333;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104587400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0306;AVGPOST=0.9968;RSQ=0.9569;ERATE=0.0004;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 104587511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.765;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7851;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104587548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104587558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104587578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104587644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104587744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4583;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104588139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104588169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7664;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104588245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9141;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104588262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9990;RSQ=0.9753;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104588290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104588389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8564;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104588550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0303;AVGPOST=0.9989;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104588583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0306;AVGPOST=0.9990;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104588599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8340;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104588622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0007;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104588684 . TA T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8099;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104588790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104588822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104588912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9799;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104588916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3044;ERATE=0.0003;THETA=0.0029;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104589068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9191;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104589096 . AT A 1229 PASS INDEL;BAVGPOST=0.757;BRSQ=0.454;LDAF=0.2649;AVGPOST=0.7638;RSQ=0.5490;ERATE=0.0410;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 104589214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0277;AVGPOST=0.9969;RSQ=0.9613;ERATE=0.0005;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104589288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8374;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104589309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.490;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7083;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104589372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0400;AVGPOST=0.9963;RSQ=0.9660;ERATE=0.0006;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104589503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0336;AVGPOST=0.9949;RSQ=0.9447;ERATE=0.0002;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104589724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5882;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104589785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8156;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104589886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104589907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104589910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7301;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104590100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0120;AVGPOST=0.9975;RSQ=0.9303;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104590108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104590149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7344;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104590200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1014;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104590268 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104590321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8380;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104590429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104590502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104590690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7106;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 104590862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2303;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 104590878 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8403;AVGPOST=0.9933;RSQ=0.9830;ERATE=0.0009;THETA=0.0010;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 104590893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5943;AVGPOST=0.9954;RSQ=0.9929;ERATE=0.0005;THETA=0.0007;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 104591132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104591223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104591361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104591386 rs72104745 GCAGTGGAATTGC G 22337 PASS INDEL;BAVGPOST=0.987;BRSQ=0.934;LDAF=0.1008;AVGPOST=0.9973;RSQ=0.9884;ERATE=0.0004;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104591408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104591528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8143;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104591614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104591678 . T TG 2680 PASS INDEL;BAVGPOST=0.982;BRSQ=0.884;LDAF=0.0775;AVGPOST=0.9851;RSQ=0.9184;ERATE=0.0008;THETA=0.0002;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 104591785 . T TG 2067 PASS INDEL;BAVGPOST=0.922;BRSQ=0.707;LDAF=0.1452;AVGPOST=0.9340;RSQ=0.8114;ERATE=0.0010;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 104591790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8661;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104591823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104591827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7873;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104591847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8012;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104591890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 104591920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104592097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104592112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104592326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104592330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104592389 . C CAGTT 4894 PASS INDEL;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0149;AVGPOST=0.9990;RSQ=0.9700;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104592418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5860;AVGPOST=0.9904;RSQ=0.9852;ERATE=0.0019;THETA=0.0009;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 104592421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104592553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104592608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0996;AVGPOST=0.9963;RSQ=0.9830;ERATE=0.0010;THETA=0.0007;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104592761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104592855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.856;LDAF=0.4659;AVGPOST=0.9274;RSQ=0.9088;ERATE=0.0004;THETA=0.0002;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 104592885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.856;LDAF=0.4644;AVGPOST=0.9281;RSQ=0.9102;ERATE=0.0005;THETA=0.0004;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 104592886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.856;LDAF=0.4640;AVGPOST=0.9276;RSQ=0.9088;ERATE=0.0005;THETA=0.0003;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 104592887 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.853;LDAF=0.4669;AVGPOST=0.9260;RSQ=0.9070;ERATE=0.0009;THETA=0.0003;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 104592889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.855;LDAF=0.7854;AVGPOST=0.9170;RSQ=0.8316;ERATE=0.0117;THETA=0.0005;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 104592917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.645;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5344;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104592923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6630;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104592949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0125;AVGPOST=0.9975;RSQ=0.9295;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104592978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593088 rs66967561 TTTTTG T 41498 PASS INDEL;BAVGPOST=0.960;BRSQ=0.931;LDAF=0.5671;AVGPOST=0.9537;RSQ=0.9257;ERATE=0.0096;THETA=0.0006;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 104593182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1640;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 104593451 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2303;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 104593467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104593551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6613;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104593594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5894;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 104593595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5660;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104593639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5921;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 104593666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104593732 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2863;AVGPOST=0.9936;RSQ=0.9897;ERATE=0.0007;THETA=0.0005;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 104593751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5598;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104593825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0506;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104593986 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104594009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104594060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104594204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0497;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104594252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0956;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 104594269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8578;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104594302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104594345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104594357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5853;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104594358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0039;AVGPOST=0.9960;RSQ=0.6220;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104594421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104594430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9001;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104594434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9046;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104594466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1750;AVGPOST=0.9972;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 104594509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7020;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104594538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0951;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 104594559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0953;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 104594616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104594644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104594701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104594735 . AG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104594837 . TA T 439 PASS INDEL;BAVGPOST=0.986;BRSQ=0.690;LDAF=0.0356;AVGPOST=0.9680;RSQ=0.6207;ERATE=0.0045;THETA=0.0010;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104595091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104595266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9409;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104595445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5090;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104595612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6945;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104595689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104595705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.807;LDAF=0.0499;AVGPOST=0.9892;RSQ=0.9168;ERATE=0.0004;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104595976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0078;AVGPOST=0.9958;RSQ=0.7993;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104595999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104596116 . ACATG A 196 PASS INDEL;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0038;AVGPOST=0.9964;RSQ=0.6174;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104596164 . C CT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6275;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104596319 . TA T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104596337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104596424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104596438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6471;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104596464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104596473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2844;AVGPOST=0.9959;RSQ=0.9918;ERATE=0.0004;THETA=0.0005;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 104596499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2847;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0005;THETA=0.0007;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 104596528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104596569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104596808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104596913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104596953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.9817;AVGPOST=0.9977;RSQ=0.9600;ERATE=0.0005;THETA=0.0005;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 104597157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8827;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104597188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104597294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9482;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104597390 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5677;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104597599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9826;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104598240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0050;AVGPOST=0.9956;RSQ=0.6683;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104598312 . TACAC T 388 PASS INDEL;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8270;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104598363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9669;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104598419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.9126;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104598741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0292;AVGPOST=0.9992;RSQ=0.9874;ERATE=0.0003;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104598802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.9204;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104598837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104598943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104598948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104599011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0078;AVGPOST=0.9984;RSQ=0.9246;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104599042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0580;AVGPOST=0.9950;RSQ=0.9650;ERATE=0.0005;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 104599365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6061;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104599472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104599606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104599635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0276;AVGPOST=0.9990;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104599651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6388;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104599654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8517;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104599792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4948;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104600000 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4970;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104600023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5443;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 104600166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9032;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104600546 . CCAGT C 1163 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9190;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104600583 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104600627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5448;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 104600790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104601005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104601025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104601136 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6416;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104601313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601370 rs66461949 AG A 26081 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5501;AVGPOST=0.9916;RSQ=0.9883;ERATE=0.0011;THETA=0.0003;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 104601388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104601602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9089;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104601657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601795 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104601819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0981;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104601824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5067;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104601889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.8007;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104601909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8871;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104601917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0983;AVGPOST=0.9987;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104601926 . A AT 743 PASS INDEL;BAVGPOST=0.991;BRSQ=0.749;LDAF=0.0302;AVGPOST=0.9731;RSQ=0.6494;ERATE=0.0054;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104601944 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6940;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104602103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104602255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7591;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 104602337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5800;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104602398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9452;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104602409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104602454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104602480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8773;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104602523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4954;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104602562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0441;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 104602571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.7781;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104602705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0298;AVGPOST=0.9980;RSQ=0.9719;ERATE=0.0004;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104602711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.631;LDAF=0.0054;AVGPOST=0.9947;RSQ=0.6278;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104602755 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.938;LDAF=0.5296;AVGPOST=0.9447;RSQ=0.9178;ERATE=0.0126;THETA=0.0001;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 104602762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104603104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104603203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104603213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9393;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104603291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8409;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104603311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104603370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5448;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 104603376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9464;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104603410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2075;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 104603452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104603506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9235;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104603554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5448;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 104603613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104603635 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0932;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0002;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 104603665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104603671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104603708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5450;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0005;THETA=0.0002;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 104603781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104603945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5455;AVGPOST=0.9982;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 104603961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104603986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9039;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104604060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104604063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104604103 . GGGTTC G 2578 PASS INDEL;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0179;AVGPOST=0.9959;RSQ=0.9150;ERATE=0.0005;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104604161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5670;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604341 . CGTA C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5233;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0046;AVGPOST=0.9968;RSQ=0.7403;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104604540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104604555 . CAG C 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8196;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104604592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8204;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104604718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8555;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104604739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104604817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104604850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104604853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0452;AVGPOST=0.9968;RSQ=0.9742;ERATE=0.0005;THETA=0.0002;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 104604902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104604959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1430;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0001;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 104605011 . C CA 8989 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0536;AVGPOST=0.9989;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104605022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5940;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104605098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4706;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104605133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104605159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3097;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0006;THETA=0.0002;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 104605160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7514;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104605228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0050;AVGPOST=0.9952;RSQ=0.6068;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104605243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104605332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104605378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9034;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104605409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8168;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104605420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104605466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0991;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0005;THETA=0.0017;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104605554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7083;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104605606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0004;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104605638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9383;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104605654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0535;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0018;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104605660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104605707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104605802 . TC T 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6908;ERATE=0.0008;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104605825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104605900 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5518;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104605945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8732;ERATE=0.0005;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104606004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6208;ERATE=0.0006;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104606017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104606024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0097;AVGPOST=0.9974;RSQ=0.9064;ERATE=0.0004;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104606046 rs67856082 CT C 7982 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0410;AVGPOST=0.9991;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104606107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104606201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104606258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9316;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104606310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5777;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104606315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0983;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104606355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0545;AVGPOST=0.9985;RSQ=0.9904;ERATE=0.0003;THETA=0.0009;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 104606376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0011;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104606439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0538;AVGPOST=0.9992;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104606456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0541;AVGPOST=0.9985;RSQ=0.9909;ERATE=0.0003;THETA=0.0014;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104606460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104606463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0463;AVGPOST=0.9970;RSQ=0.9759;ERATE=0.0004;THETA=0.0009;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 104606475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6741;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104606555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8327;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104606634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4801;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104606645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0387;AVGPOST=0.9994;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104606683 . C CT 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104606753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.927;LDAF=0.0379;AVGPOST=0.9926;RSQ=0.9258;ERATE=0.0007;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 104606896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104606979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7063;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104607085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0537;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104607223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0539;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0004;THETA=0.0013;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104607249 . AT A 60 PASS INDEL;BAVGPOST=0.981;BRSQ=0.829;LDAF=0.0393;AVGPOST=0.9920;RSQ=0.9257;ERATE=0.0004;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104607382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5434;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104607448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7850;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104607590 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104607643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104607739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0238;AVGPOST=0.9992;RSQ=0.9855;ERATE=0.0003;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104607825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104607843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8971;ERATE=0.0004;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104607975 . TA T 216 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7553;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104608012 . T TGAA 5600 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0538;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0005;THETA=0.0013;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104608042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4668;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104608331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104608349 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104608390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0388;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0004;THETA=0.0013;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104608412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0329;AVGPOST=0.9990;RSQ=0.9891;ERATE=0.0003;THETA=0.0034;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104608453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0992;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0012;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104608461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608469 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0070;AVGPOST=0.9965;RSQ=0.8192;ERATE=0.0007;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104608587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6244;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104608602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104608608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0992;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0008;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104608627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0535;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104608665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104608832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8379;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104608913 . AG A 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104609028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5667;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104609106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9652;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104609164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104609265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104609299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0389;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104609360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104609420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8191;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104609485 . GCA G 161 PASS INDEL;BAVGPOST=0.987;BRSQ=0.682;LDAF=0.0293;AVGPOST=0.9690;RSQ=0.5548;ERATE=0.0122;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104609640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0107;AVGPOST=0.9983;RSQ=0.9312;ERATE=0.0003;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104609670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8773;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104609708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104609823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104609831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0457;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0014;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 104609840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104609978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1378;AVGPOST=0.9889;RSQ=0.9620;ERATE=0.0004;THETA=0.0012;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 104609994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0534;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104610021 . CCTCT C 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4707;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104610062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0141;AVGPOST=0.9986;RSQ=0.9571;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104610074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6470;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104610078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0169;AVGPOST=0.9976;RSQ=0.9435;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104610079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6396;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0018;THETA=0.0004;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 104610124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104610206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104610356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104610407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7633;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 104610418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104610461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0732;AVGPOST=0.9976;RSQ=0.9900;ERATE=0.0004;THETA=0.0008;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 104610661 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9151;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104610722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104610747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104610761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104610773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8156;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104610774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104610782 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104610802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5358;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104610946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104611112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9718;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104611131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6114;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104611152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8177;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104611196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9992;RSQ=0.9848;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104611215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7358;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104611258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0064;AVGPOST=0.9977;RSQ=0.8585;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104611277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9357;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104611339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6541;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104611367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7860;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104611378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104611387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9305;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104611406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7648;AVGPOST=0.9974;RSQ=0.9937;ERATE=0.0004;THETA=0.0020;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 104611489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7656;AVGPOST=0.9947;RSQ=0.9885;ERATE=0.0009;THETA=0.0006;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 104611534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8859;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104611568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104611579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104611649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0157;AVGPOST=0.9973;RSQ=0.9317;ERATE=0.0007;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104611657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104611715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5735;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104611763 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104611785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104611800 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8248;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104611803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104611992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9984;RSQ=0.9698;ERATE=0.0003;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104612119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104612129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3778;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104612198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104612249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.768;LDAF=0.0084;AVGPOST=0.9944;RSQ=0.7562;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104612291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7843;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104612329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104612371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0121;AVGPOST=0.9993;RSQ=0.9736;ERATE=0.0003;THETA=0.0029;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104612427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9156;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104612463 . TA T 128 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8447;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104612658 . GCCATTA G 339 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4783;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104612754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104612850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0942;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 104612879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104612998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0133;AVGPOST=0.9994;RSQ=0.9787;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104613110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6401;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104613222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104613252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.1968;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104613376 . CCTGT C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5092;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104613385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104613428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104613474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7335;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104613481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104613561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104613612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104613697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7698;AVGPOST=0.9923;RSQ=0.9819;ERATE=0.0007;THETA=0.0003;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 104613705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0045;AVGPOST=0.9966;RSQ=0.7483;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104613812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104613842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0215;AVGPOST=0.9978;RSQ=0.9607;ERATE=0.0003;THETA=0.0028;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104614092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104614200 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1014;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0012;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 104614280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7296;ERATE=0.0003;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104614405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104614456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104614471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104614498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7332;ERATE=0.0007;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104614503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6829;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104614530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0089;AVGPOST=0.9951;RSQ=0.8068;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104614541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104614577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0004;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104614631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0222;AVGPOST=0.9937;RSQ=0.8984;ERATE=0.0005;THETA=0.0068;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104614644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9298;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104614712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104614715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104614838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104614937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104615055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104615077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104615198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104615219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104615368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1196;AVGPOST=0.9977;RSQ=0.9927;ERATE=0.0005;THETA=0.0008;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 104615403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104615464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104615771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104615773 . CCTGA C 1077 PASS INDEL;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0077;AVGPOST=0.9964;RSQ=0.8287;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104615781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104615903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104616081 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5520;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104616085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5842;AVGPOST=0.9879;RSQ=0.9798;ERATE=0.0008;THETA=0.0005;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 104616233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1312;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 104616392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8631;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104616420 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104616452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0180;AVGPOST=0.9976;RSQ=0.9449;ERATE=0.0004;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104616537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104616738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4938;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104616785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4911;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104616884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.880;LDAF=0.1235;AVGPOST=0.9883;RSQ=0.9639;ERATE=0.0006;THETA=0.0010;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 104617015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4365;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104617079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5449;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8274;ERATE=0.0005;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104617266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4492;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1277;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 104617592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6525;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1237;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0010;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 104617704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7341;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104617711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5029;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617783 . T TAC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7100;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104617893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104617969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104617988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104618081 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0011;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104618280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104618313 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104618367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104618399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7013;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104618474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4353;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104618524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0388;AVGPOST=0.9927;RSQ=0.9268;ERATE=0.0005;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 104618537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104618558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6791;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104618563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7259;ERATE=0.0009;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104618586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5712;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104618589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8496;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104618601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.9045;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104618914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0014;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104619108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104619148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0004;THETA=0.0023;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104619196 . CCA C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104619202 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0179;AVGPOST=0.9951;RSQ=0.8858;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104619416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104619531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104619567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5379;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104619737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104619807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.524;LDAF=0.0153;AVGPOST=0.9793;RSQ=0.4935;ERATE=0.0041;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104619984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6215;ERATE=0.0011;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104620130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2399;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0006;THETA=0.0002;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 104620243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2288;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 104620377 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104620492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8878;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104620625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104620646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0246;AVGPOST=0.9962;RSQ=0.9377;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104620908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104620970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104620979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6522;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104621109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2420;AVGPOST=0.9968;RSQ=0.9931;ERATE=0.0004;THETA=0.0027;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 104621110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0074;AVGPOST=0.9968;RSQ=0.8327;ERATE=0.0003;THETA=0.0032;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104621230 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104621246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104621276 . CA C 470 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8554;ERATE=0.0005;THETA=0.0084;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104621353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104621357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.2425;AVGPOST=0.9884;RSQ=0.9778;ERATE=0.0014;THETA=0.0385;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 104621387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7320;ERATE=0.0003;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104621575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0133;AVGPOST=0.9985;RSQ=0.9580;ERATE=0.0003;THETA=0.0178;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104621665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.950;LDAF=0.2407;AVGPOST=0.9775;RSQ=0.9582;ERATE=0.0007;THETA=0.0032;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 104622048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9511;ERATE=0.0003;THETA=0.0075;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104622068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104622101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9479;ERATE=0.0003;THETA=0.0051;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104622104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104622122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9489;ERATE=0.0004;THETA=0.0102;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104622136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0150;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104622196 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.961;LDAF=0.9299;AVGPOST=0.9943;RSQ=0.9657;ERATE=0.0003;THETA=0.0064;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 104622285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1460;AVGPOST=0.9966;RSQ=0.9892;ERATE=0.0004;THETA=0.0102;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 104622346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104622534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1863;AVGPOST=0.9812;RSQ=0.9585;ERATE=0.0004;THETA=0.0007;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 104622556 rs72012204 GA G 12073 PASS INDEL;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1636;AVGPOST=0.9948;RSQ=0.9845;ERATE=0.0007;THETA=0.0023;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 104622582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104622630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5041;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104622723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9553;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104622768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104622782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9603;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104622791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104623034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104623063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1410;AVGPOST=0.9956;RSQ=0.9866;ERATE=0.0005;THETA=0.0003;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 104623162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.641;LDAF=0.0039;AVGPOST=0.9941;RSQ=0.4054;ERATE=0.0011;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104623251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104623463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5818;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104623531 . AAAC A 963 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104623551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9610;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104623571 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0127;AVGPOST=0.9970;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104623658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104623730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104623745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104623779 . TC T 5143 PASS INDEL;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.1180;AVGPOST=0.9912;RSQ=0.9678;ERATE=0.0006;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104623855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7152;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104623906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2192;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 104623910 . CATAATAGAG C 1380 PASS INDEL;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0097;AVGPOST=0.9959;RSQ=0.8408;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104624080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6364;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104624099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4423;AVGPOST=0.9941;RSQ=0.9918;ERATE=0.0012;THETA=0.0005;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 104624200 rs112181419 C CA 19452 PASS INDEL;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2415;AVGPOST=0.9874;RSQ=0.9752;ERATE=0.0025;THETA=0.0007;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 104624506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0266;AVGPOST=0.9985;RSQ=0.9807;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104624518 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.8763;AVGPOST=0.9881;RSQ=0.9582;ERATE=0.0012;THETA=0.0004;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 104624523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5447;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104624639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3789;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104624653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104624814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104624836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104625016 . TG T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104625029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9507;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104625076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0095;AVGPOST=0.9987;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104625079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104625190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104625229 . A AT 970 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0084;AVGPOST=0.9968;RSQ=0.8582;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104625241 . C CT 356 PASS INDEL;BAVGPOST=0.939;BRSQ=0.394;LDAF=0.1258;AVGPOST=0.8327;RSQ=0.3972;ERATE=0.0114;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 104627137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1091;AVGPOST=0.9920;RSQ=0.9734;ERATE=0.0007;THETA=0.0053;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104627181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.5103;AVGPOST=0.9886;RSQ=0.9832;ERATE=0.0005;THETA=0.0002;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 104627259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9423;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104627275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8402;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104627446 . C CG 13521 PASS INDEL;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.5021;AVGPOST=0.9456;RSQ=0.9181;ERATE=0.0058;THETA=0.0002;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 104628242 . A AATCTC 696 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104628336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0653;AVGPOST=0.9962;RSQ=0.9737;ERATE=0.0008;THETA=0.0075;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 104628418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.820;BRSQ=0.727;LDAF=0.3876;AVGPOST=0.8252;RSQ=0.7610;ERATE=0.0134;THETA=0.0006;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 104628475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8021;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104628576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9050;ERATE=0.0006;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104628599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.828;LDAF=0.4806;AVGPOST=0.8699;RSQ=0.7766;ERATE=0.0917;THETA=0.0007;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 104629160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0022;AVGPOST=0.9963;RSQ=0.2517;ERATE=0.0006;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104631045 . AT A 648 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0063;AVGPOST=0.9966;RSQ=0.7694;ERATE=0.0005;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104631411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.811;LDAF=0.3948;AVGPOST=0.8550;RSQ=0.7998;ERATE=0.0170;THETA=0.0013;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 104631474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.738;LDAF=0.2966;AVGPOST=0.8621;RSQ=0.7850;ERATE=0.0012;THETA=0.0014;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 104631488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.751;LDAF=0.0511;AVGPOST=0.9657;RSQ=0.7130;ERATE=0.0053;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 104631566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.826;BRSQ=0.665;LDAF=0.1598;AVGPOST=0.9100;RSQ=0.7507;ERATE=0.0014;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104631673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0210;AVGPOST=0.9943;RSQ=0.8956;ERATE=0.0005;THETA=0.0018;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104631868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.807;BRSQ=0.658;LDAF=0.2515;AVGPOST=0.8404;RSQ=0.7089;ERATE=0.0130;THETA=0.0020;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 104632100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6648;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104632124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.953;LDAF=0.4136;AVGPOST=0.9827;RSQ=0.9759;ERATE=0.0003;THETA=0.0062;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 104632157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104632252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9433;ERATE=0.0004;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104632257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8913;ERATE=0.0004;THETA=0.0064;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104632269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7659;ERATE=0.0005;THETA=0.0062;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104632271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.925;LDAF=0.3616;AVGPOST=0.9392;RSQ=0.9044;ERATE=0.0139;THETA=0.0004;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 104632283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104632360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104632387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6900;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104632394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104632421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0502;AVGPOST=0.9989;RSQ=0.9916;ERATE=0.0003;THETA=0.0040;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104632622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4321;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104632626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9714;ERATE=0.0003;THETA=0.0030;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104632652 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5776;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104633061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4872;AVGPOST=0.9921;RSQ=0.9889;ERATE=0.0009;THETA=0.0006;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 104633064 . ATTGAG A 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104633138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104633191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104633272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4905;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104633282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8736;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104633493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104633508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104633534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9434;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104633565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6325;ERATE=0.0003;THETA=0.0034;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104633595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4962;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 104633654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.910;LDAF=0.0508;AVGPOST=0.9894;RSQ=0.9194;ERATE=0.0005;THETA=0.0009;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104633723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0466;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 104633729 . C CT 25 PASS INDEL;BAVGPOST=0.992;BRSQ=0.527;LDAF=0.0205;AVGPOST=0.9749;RSQ=0.5174;ERATE=0.0048;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104633938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7920;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104633951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5666;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104634001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104634157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104634243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4756;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104634304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104634305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104634422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104634430 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104634491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.9003;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104634495 . T TA 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0039;AVGPOST=0.9941;RSQ=0.4433;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104634545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4896;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104634810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2113;AVGPOST=0.9964;RSQ=0.9912;ERATE=0.0006;THETA=0.0006;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 104634818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6945;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104634848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104634858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0027;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104634868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104635069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0162;AVGPOST=0.9994;RSQ=0.9827;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104635092 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104635189 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104635197 . A AG 44347 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9976;AVGPOST=0.9970;RSQ=0.5150;ERATE=0.0005;THETA=0.0003;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 104635250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5281;ERATE=0.0005;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104635255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8671;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104635300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104635381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9437;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104635383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1925;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104635390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4259;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104635416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5896;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104635485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.7656;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104635540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8165;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104635563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104635678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5880;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104635876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0069;AVGPOST=0.9975;RSQ=0.8652;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104636103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104636170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9544;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104636229 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.798;LDAF=0.0199;AVGPOST=0.9891;RSQ=0.7897;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104636283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8604;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104636486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104636520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0319;AVGPOST=0.9980;RSQ=0.9725;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104636539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4667;AVGPOST=0.9965;RSQ=0.9951;ERATE=0.0007;THETA=0.0006;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 104636555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0105;AVGPOST=0.9953;RSQ=0.8377;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104636684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4974;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 104636784 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7133;ERATE=0.0004;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104636959 . CT C 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3960;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104636992 . TC T 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6058;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104636993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104637137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5636;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637241 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.6102;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104637294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8278;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104637304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104637326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9989;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104637333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9248;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104637374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0475;AVGPOST=0.9972;RSQ=0.9736;ERATE=0.0003;THETA=0.0010;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 104637387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104637393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104637415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104637492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104637620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5616;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104637652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104637653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6612;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104637706 . ATATATC A 4885 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0268;AVGPOST=0.9957;RSQ=0.9488;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104637762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0055;AVGPOST=0.9941;RSQ=0.5534;ERATE=0.0011;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104637922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104638114 . A AT 1863 PASS INDEL;BAVGPOST=0.972;BRSQ=0.716;LDAF=0.0620;AVGPOST=0.9530;RSQ=0.6815;ERATE=0.0080;THETA=0.0029;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104638192 . TA T 8952 PASS INDEL;BAVGPOST=0.901;BRSQ=0.838;LDAF=0.3926;AVGPOST=0.9250;RSQ=0.8939;ERATE=0.0046;THETA=0.0002;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 104638196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.952;LDAF=0.4298;AVGPOST=0.9694;RSQ=0.9560;ERATE=0.0024;THETA=0.0006;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 104638197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104638213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8777;ERATE=0.0003;THETA=0.0071;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104638293 rs11400899 A AG 6509 PASS INDEL;BAVGPOST=0.988;BRSQ=0.919;LDAF=0.0609;AVGPOST=0.9882;RSQ=0.9365;ERATE=0.0026;THETA=0.0005;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 104638336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8606;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104638485 rs36089782 CT C 9081 PASS INDEL;BAVGPOST=0.949;BRSQ=0.922;LDAF=0.3644;AVGPOST=0.8995;RSQ=0.8526;ERATE=0.0120;THETA=0.0017;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 104638546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.737;LDAF=0.0086;AVGPOST=0.9920;RSQ=0.6456;ERATE=0.0009;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104638660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0204;AVGPOST=0.9977;RSQ=0.9622;ERATE=0.0004;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104638829 . CAGG C 168 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104638882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104638915 . G GA 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8895;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104639414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8963;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104639427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0004;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104639468 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104639494 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104639612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8679;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104639635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9431;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104639659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5223;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104639683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104639709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104639893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7995;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104639912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0160;AVGPOST=0.9992;RSQ=0.9801;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104639923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104639944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104639947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1428;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0008;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 104639977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104640042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1086;AVGPOST=0.9982;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104640064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9260;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104640133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.9328;AVGPOST=0.9941;RSQ=0.9669;ERATE=0.0003;THETA=0.0006;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 104640184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1372;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 104640269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104640274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104640283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9057;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104640300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104640492 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104640552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104640683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104640726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0892;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 104641008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8928;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104641106 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0704;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 104641169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104641323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104641329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104641345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0722;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0003;THETA=0.0011;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 104641398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6130;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104641651 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0169;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104641697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5775;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104641730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8702;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104641742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104641758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0107;AVGPOST=0.9992;RSQ=0.9652;ERATE=0.0003;THETA=0.0023;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104641803 . CCA C 2012 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0026;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104641834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104641842 . T TAC 70097 PASS INDEL;BAVGPOST=0.988;BRSQ=0.985;LDAF=0.4746;AVGPOST=0.9694;RSQ=0.9548;ERATE=0.0069;THETA=0.0007;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 104641924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.5780;AVGPOST=0.9948;RSQ=0.9919;ERATE=0.0006;THETA=0.0006;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 104642082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104642364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104642557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8568;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104642584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104642600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0097;AVGPOST=0.9982;RSQ=0.9390;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104642616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.6864;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104642625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104642649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7401;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104642692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104642694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7458;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104642828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9478;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104642947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9380;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104643006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3883;AVGPOST=0.9915;RSQ=0.9881;ERATE=0.0005;THETA=0.0007;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 104643067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4179;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104643277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8674;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104643384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5160;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104643470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0199;AVGPOST=0.9985;RSQ=0.9724;ERATE=0.0004;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104643500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5340;AVGPOST=0.9929;RSQ=0.9895;ERATE=0.0005;THETA=0.0006;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 104643726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104643802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104643816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8000;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104643913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6473;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104643922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104643925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7772;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104643926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6725;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104643944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.8070;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104643961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104643983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8849;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104643991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9478;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104644030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104644040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8372;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104644095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104644269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7724;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104644334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9549;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104644438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6866;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104644516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104644726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9661;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104644774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0183;AVGPOST=0.9984;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104644983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0003;THETA=0.0019;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104644991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4560;AVGPOST=0.9883;RSQ=0.9838;ERATE=0.0009;THETA=0.0011;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 104644997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5164;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104645008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5486;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104645040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0003;THETA=0.0013;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104645044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104645268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0164;AVGPOST=0.9976;RSQ=0.9371;ERATE=0.0004;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104645271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104645328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104645343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9531;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104645360 rs66808177 CTCCCAA C 62486 PASS INDEL;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.4581;AVGPOST=0.9662;RSQ=0.9516;ERATE=0.0047;THETA=0.0036;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 104645498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6197;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104645572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9256;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104645759 . G GA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104645767 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5705;AVGPOST=0.9866;RSQ=0.9795;ERATE=0.0005;THETA=0.0229;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 104645852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0146;AVGPOST=0.9989;RSQ=0.9698;ERATE=0.0004;THETA=0.0112;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104646042 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4806;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104646271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0085;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104646273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7514;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104646322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0004;THETA=0.0063;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104646683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.956;LDAF=0.9151;AVGPOST=0.9842;RSQ=0.9230;ERATE=0.0007;THETA=0.0170;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 104646788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5338;ERATE=0.0003;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104646800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0136;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104646821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.922;LDAF=0.0588;AVGPOST=0.9862;RSQ=0.9023;ERATE=0.0008;THETA=0.0148;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104646842 rs36071972 C CT 1172 PASS INDEL;BAVGPOST=0.973;BRSQ=0.706;LDAF=0.0521;AVGPOST=0.9521;RSQ=0.6153;ERATE=0.0115;THETA=0.0101;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104646873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8816;ERATE=0.0004;THETA=0.0108;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104646956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.6950;ERATE=0.0006;THETA=0.0179;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104646989 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0085;AVGPOST=0.9967;RSQ=0.8305;ERATE=0.0009;THETA=0.0127;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104647019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0065;AVGPOST=0.9953;RSQ=0.7136;ERATE=0.0011;THETA=0.0066;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104647055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0388;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0012;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104647645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8547;ERATE=0.0004;THETA=0.0046;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104647679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8109;ERATE=0.0005;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104647695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.796;LDAF=0.0346;AVGPOST=0.9847;RSQ=0.8425;ERATE=0.0016;THETA=0.0013;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104647770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.689;LDAF=0.0393;AVGPOST=0.9760;RSQ=0.7585;ERATE=0.0034;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104648325 . TCTCA T 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4561;ERATE=0.0005;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104648432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.490;LDAF=0.8074;AVGPOST=0.8218;RSQ=0.5429;ERATE=0.0404;THETA=0.0010;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 104648610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0266;AVGPOST=0.9894;RSQ=0.8509;ERATE=0.0004;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104648671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.808;LDAF=0.0279;AVGPOST=0.9882;RSQ=0.8373;ERATE=0.0005;THETA=0.0016;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104648674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2660;AVGPOST=0.9896;RSQ=0.9793;ERATE=0.0009;THETA=0.0005;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 104648765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0407;AVGPOST=0.9980;RSQ=0.9827;ERATE=0.0003;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104649092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0397;AVGPOST=0.9985;RSQ=0.9851;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104649104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2668;AVGPOST=0.9920;RSQ=0.9844;ERATE=0.0007;THETA=0.0012;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 104649227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104649982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0239;AVGPOST=0.9959;RSQ=0.9287;ERATE=0.0007;THETA=0.0034;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104649988 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104649999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.785;LDAF=0.0300;AVGPOST=0.9935;RSQ=0.9132;ERATE=0.0009;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104650272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5796;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104650370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0402;AVGPOST=0.9985;RSQ=0.9845;ERATE=0.0003;THETA=0.0027;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104650400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104650460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0184;AVGPOST=0.9985;RSQ=0.9707;ERATE=0.0004;THETA=0.0047;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104650805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.726;LDAF=0.9769;AVGPOST=0.9838;RSQ=0.7168;ERATE=0.0016;THETA=0.0008;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 104650851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.555;LDAF=0.0056;AVGPOST=0.9924;RSQ=0.4276;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104650907 rs61307993 TA T 26 PASS INDEL;BAVGPOST=0.997;BRSQ=0.399;LDAF=0.0055;AVGPOST=0.9925;RSQ=0.4862;ERATE=0.0008;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104650944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.829;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9153;ERATE=0.0003;THETA=0.0053;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104651399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.771;LDAF=0.0278;AVGPOST=0.9884;RSQ=0.8594;ERATE=0.0006;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104651770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5962;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104651771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104651914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2501;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 104651929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0858;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0016;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 104652082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104652155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104652218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1076;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0008;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104652267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.0980;AVGPOST=0.9970;RSQ=0.9902;ERATE=0.0003;THETA=0.0006;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104652268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.0973;AVGPOST=0.9969;RSQ=0.9901;ERATE=0.0002;THETA=0.0010;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104652271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.938;LDAF=0.0407;AVGPOST=0.9926;RSQ=0.9292;ERATE=0.0003;THETA=0.0011;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104652284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5094;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104652391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.0923;AVGPOST=0.9956;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 104652495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5103;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104652537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0002;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 104652650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6749;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104652807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5944;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104652834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104652847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8117;ERATE=0.0002;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104652853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2497;AVGPOST=0.9909;RSQ=0.9837;ERATE=0.0008;THETA=0.0006;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 104652910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9408;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104652969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9729;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104652974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9371;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104652980 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1069;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 104652984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1069;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 104652993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9507;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104653000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0228;AVGPOST=0.9964;RSQ=0.9387;ERATE=0.0006;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104653081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4531;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104653102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6833;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104653179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6344;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104653250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7956;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104653259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1082;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104653263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104653381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8413;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104653404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0501;AVGPOST=0.9992;RSQ=0.9925;ERATE=0.0002;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 104653543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0443;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104653571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9982;RSQ=0.9782;ERATE=0.0003;THETA=0.0017;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104653616 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0004;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104653645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0993;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0033;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104653846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9979;RSQ=0.9827;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 104653853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0447;AVGPOST=0.9988;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104653867 . AC A 51 PASS INDEL;BAVGPOST=0.998;BRSQ=0.539;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3740;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104653980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104653981 . AG A 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104653996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104654173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1087;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0005;THETA=0.0008;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104654267 . G GA 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.421;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6125;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104654325 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5092;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104654465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104654497 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104654502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7895;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104654758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104654762 rs74344093 TC T 12380 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1112;AVGPOST=0.9948;RSQ=0.9812;ERATE=0.0007;THETA=0.0008;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 104654772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4963;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104654856 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8698;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104654919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.684;LDAF=0.0132;AVGPOST=0.9874;RSQ=0.6444;ERATE=0.0009;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104654992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4140;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104655032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.2078;AVGPOST=0.9930;RSQ=0.9858;ERATE=0.0008;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 104655083 . A AT 2860 PASS INDEL;BAVGPOST=0.923;BRSQ=0.715;LDAF=0.1606;AVGPOST=0.8818;RSQ=0.6856;ERATE=0.0105;THETA=0.0004;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104655089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0106;AVGPOST=0.9894;RSQ=0.6227;ERATE=0.0006;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104655187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0451;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104655199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.938;LDAF=0.0762;AVGPOST=0.9886;RSQ=0.9530;ERATE=0.0007;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 104655209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.908;LDAF=0.0807;AVGPOST=0.9868;RSQ=0.9499;ERATE=0.0007;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 104655230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.938;LDAF=0.1834;AVGPOST=0.9838;RSQ=0.9645;ERATE=0.0008;THETA=0.0019;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 104655245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8865;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104655422 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104655448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9082;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104655606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0472;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 104655722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0993;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104655813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104655865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104655886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0002;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104655887 . T TTCCAC 31887 PASS INDEL;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3062;AVGPOST=0.9944;RSQ=0.9912;ERATE=0.0009;THETA=0.0007;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 104655934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7079;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104655992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9102;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104656063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9576;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104656293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1078;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0012;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 104656427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104656608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5009;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104656666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104656772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0392;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0002;THETA=0.0012;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104656794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104656834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9057;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104656904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.0971;AVGPOST=0.9947;RSQ=0.9760;ERATE=0.0004;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 104657168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.866;LDAF=0.0193;AVGPOST=0.9984;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104657256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104657369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104657404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104657859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104657868 . A AGATG 1620 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9977;RSQ=0.8800;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104657905 rs34475402 A AGAT 5483 PASS INDEL;BAVGPOST=0.937;BRSQ=0.673;LDAF=0.1487;AVGPOST=0.8866;RSQ=0.6079;ERATE=0.0596;THETA=0.0002;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 104657962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6901;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104657977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104657985 . AT A 97 PASS INDEL;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0067;AVGPOST=0.9970;RSQ=0.8121;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104657992 . AT A 171 PASS INDEL;BAVGPOST=0.996;BRSQ=0.712;LDAF=0.0131;AVGPOST=0.9891;RSQ=0.6797;ERATE=0.0013;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104657996 . A AT 1014 PASS INDEL;BAVGPOST=0.980;BRSQ=0.750;LDAF=0.0547;AVGPOST=0.9546;RSQ=0.6373;ERATE=0.0237;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104658004 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8563;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104658174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4680;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104658175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0341;AVGPOST=0.9964;RSQ=0.9559;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104658307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0261;AVGPOST=0.9988;RSQ=0.9837;ERATE=0.0003;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104658315 . A AG 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5101;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104658429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6129;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 104658729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7907;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104658741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8580;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104658898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104659025 . A AC 63 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104659228 . CA C 33 PASS INDEL;BAVGPOST=0.994;BRSQ=0.641;LDAF=0.0112;AVGPOST=0.9957;RSQ=0.8472;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104659240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104659308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0182;AVGPOST=0.9974;RSQ=0.9382;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104659456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104659476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104659645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5976;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0008;THETA=0.0003;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 104659733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104659819 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104659821 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104660000 . T TG 25040 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.5939;AVGPOST=0.9943;RSQ=0.9908;ERATE=0.0009;THETA=0.0004;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 104660032 . G GT 272 PASS INDEL;BAVGPOST=0.971;BRSQ=0.507;LDAF=0.0506;AVGPOST=0.9372;RSQ=0.4858;ERATE=0.0130;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104660033 rs34289449 G GT 74971 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.5948;AVGPOST=0.9929;RSQ=0.9887;ERATE=0.0011;THETA=0.0003;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 104660034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6180;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104660125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0350;AVGPOST=0.9968;RSQ=0.9644;ERATE=0.0004;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104660292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7308;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104660319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6814;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104660339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104660475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5218;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 104660565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6213;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104660585 . CG C 1515 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9994;RSQ=0.9842;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104660610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7268;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104660611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0089;AVGPOST=0.9985;RSQ=0.9280;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104660669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8400;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104660794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8089;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104660942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104661063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5220;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 104661227 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0305;AVGPOST=0.9973;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104661360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7298;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104661610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104661626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8249;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104661629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104661660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104661740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5536;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104661791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5222;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 104661811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9993;RSQ=0.9821;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104661825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5222;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 104661832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6066;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104661849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5956;AVGPOST=0.9945;RSQ=0.9902;ERATE=0.0010;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 104661993 . G GT 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7005;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104662031 . AC A 1436 PASS INDEL;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0155;AVGPOST=0.9961;RSQ=0.8939;ERATE=0.0006;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104662183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2944;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0004;THETA=0.0001;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104662204 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.888;LDAF=0.1150;AVGPOST=0.9796;RSQ=0.9203;ERATE=0.0034;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 104662266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104662325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4008;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104662371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0596;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 104662451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4640;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104662505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104662534 . T TG 28228 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2965;AVGPOST=0.9942;RSQ=0.9878;ERATE=0.0016;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 104662648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2240;AVGPOST=0.9968;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 104662656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8361;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104662663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0079;AVGPOST=0.9969;RSQ=0.8313;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104662912 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4150;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104662921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9993;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104663057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104663067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.946;LDAF=0.2835;AVGPOST=0.9554;RSQ=0.9157;ERATE=0.0066;THETA=0.0004;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 104663194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6911;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104663235 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2947;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104663270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104663300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104663303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2945;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0008;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 104663402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104663418 . AAAAC A 703 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.9129;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104663438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2944;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104663473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2945;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104663492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104663620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104663741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104663781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0617;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 104663827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7632;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104663944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5294;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104663963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0015;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 104664175 . A AT 36917 PASS INDEL;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.8292;AVGPOST=0.9891;RSQ=0.9704;ERATE=0.0003;THETA=0.0002;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 104664253 rs11427392 T TA 112923 PASS INDEL;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.8293;AVGPOST=0.9904;RSQ=0.9737;ERATE=0.0004;THETA=0.0002;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 104664254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104664476 . TAAC T 231 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4938;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104664554 . G GA 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104664645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104664714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2284;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 104664811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104664831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1699;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 104664832 . AC A 858 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9125;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104664933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6951;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104664940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104664948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2941;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0012;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 104665015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1245;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 104665071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9247;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104665108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1346;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 104665150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6944;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104665158 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104665329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104665338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104665448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8501;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 104665569 . AC A 516 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104665614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104665615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6629;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 104665645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3589;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 104665662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8501;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 104665665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104666337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 104666361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104666383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8954;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104666439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104666472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104666479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1341;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 104666485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.9862;AVGPOST=0.9976;RSQ=0.9403;ERATE=0.0005;THETA=0.0002;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 104666500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9030;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104666507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104666618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2947;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0008;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 104666643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104666742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.509;LDAF=0.0085;AVGPOST=0.9884;RSQ=0.4771;ERATE=0.0025;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104666954 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8536;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104667132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2282;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 104667145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104667178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0341;AVGPOST=0.9963;RSQ=0.9550;ERATE=0.0004;THETA=0.0011;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104667220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0061;AVGPOST=0.9966;RSQ=0.7586;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104667337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9383;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104667551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104667685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0152;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104667708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6698;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104667718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7710;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104667723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8672;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104667801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104667849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0125;AVGPOST=0.9991;RSQ=0.9709;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104667930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9500;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104668144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104668164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104668182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8916;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104668266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9594;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104668270 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7411;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104668281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.861;LDAF=0.0215;AVGPOST=0.9947;RSQ=0.9133;ERATE=0.0005;THETA=0.0033;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104668313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104668608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0002;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104668666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9067;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104668692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7098;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104668857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9334;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104668858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0058;AVGPOST=0.9931;RSQ=0.5472;ERATE=0.0011;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104668938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0128;AVGPOST=0.9954;RSQ=0.8590;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104669001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0092;AVGPOST=0.9957;RSQ=0.8129;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104669219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9235;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104669274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.5766;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104669409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104669458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0607;AVGPOST=0.9982;RSQ=0.9877;ERATE=0.0003;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 104669503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9510;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 104669515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0062;AVGPOST=0.9960;RSQ=0.7743;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104669542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0002;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104669570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7013;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104669598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9638;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104669740 . CCTCT C 418 PASS INDEL;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104669742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0256;AVGPOST=0.9961;RSQ=0.9481;ERATE=0.0002;THETA=0.0012;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104669892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8138;AVGPOST=0.9970;RSQ=0.9921;ERATE=0.0007;THETA=0.0008;AC=1779;AN=2184 GT:DS:GL:BD 0.81456041 1
1 104670041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0233;AVGPOST=0.9896;RSQ=0.8140;ERATE=0.0013;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104670248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.318;LDAF=0.0053;AVGPOST=0.9952;RSQ=0.6127;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104670302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104670553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104670617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104670749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104670763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9587;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 104670876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104670978 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104671046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9124;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104671072 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7995;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104671085 . CAG C 1598 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0003;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104671161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9270;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104671662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5245;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104671714 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5044;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104671754 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104671757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104671858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8986;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104671859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0077;AVGPOST=0.9982;RSQ=0.9140;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104671861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104671864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104671902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.477;LDAF=0.0060;AVGPOST=0.9919;RSQ=0.4843;ERATE=0.0019;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104671947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104671990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7356;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104672015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104672207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104672421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104672527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104672561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104672584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104672618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2074;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 104672830 . T TA 342 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6048;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104673143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104673171 . ACTGT A 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104673286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104673329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8968;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104673377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6739;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104673391 . GTT G 679 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9379;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104673433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7444;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104673469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4014;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 104673491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7524;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104673494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6370;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0007;THETA=0.0003;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 104673720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674424 . TAGAA T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674669 . AC A 159 PASS INDEL;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0044;AVGPOST=0.9941;RSQ=0.4971;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104674745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4222;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674806 . T TC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9174;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104674944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104674977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8331;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104675154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675289 . GAA G 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5413;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104675310 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0009;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104675414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9041;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104675417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675663 . T TG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0016;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104675798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6367;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 104675912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104675936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9353;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104675980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9441;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104676080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104676081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7401;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104676121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9872;ERATE=0.0006;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104676155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2078;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0021;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 104676190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104676667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104676699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104676702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8627;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104676761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3996;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0007;THETA=0.0003;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 104676806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104676835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104676938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104677007 . A ATT 303 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104677069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104677114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104677284 . T TG 313 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104677348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6742;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104677383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104677444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104677455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0598;AVGPOST=0.9987;RSQ=0.9934;ERATE=0.0003;THETA=0.0013;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 104677562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104677645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9402;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104677772 . ATAAAAT A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6220;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104677811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0004;THETA=0.0021;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 104677825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9475;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104677863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104677890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6258;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104677896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104677942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104677965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104678191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104678302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104678432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104678480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104678599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104678675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104678676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0485;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0014;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104678686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104678763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.889;LDAF=0.0565;AVGPOST=0.9764;RSQ=0.8340;ERATE=0.0078;THETA=0.0010;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104678854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104678945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0396;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 104678946 . T TAC 252 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0059;AVGPOST=0.9928;RSQ=0.5132;ERATE=0.0016;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104679016 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5201;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104679082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0125;AVGPOST=0.9991;RSQ=0.9683;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104679216 . G GCA 362 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9383;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104679245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4656;ERATE=0.0006;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104679318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6382;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104679409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5587;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104679419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0086;AVGPOST=0.9973;RSQ=0.8788;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104679423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5973;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104679434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104679541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8935;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104679560 rs112923904 CAG C 185 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9056;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104679578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8678;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104679627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104679734 . TAC T 332 PASS INDEL;BAVGPOST=0.977;BRSQ=0.680;LDAF=0.0561;AVGPOST=0.9410;RSQ=0.5390;ERATE=0.0262;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 104679817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0103;AVGPOST=0.9988;RSQ=0.9449;ERATE=0.0006;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104679846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9783;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104680077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9756;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104680082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1340;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 104680156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0395;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104680167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104680243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104680317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7777;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7802;ERATE=0.0005;THETA=0.0045;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104680340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.4560;ERATE=0.0006;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0121;AVGPOST=0.9985;RSQ=0.9426;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104680444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6039;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9962;RSQ=0.8657;ERATE=0.0006;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104680558 . C CA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.4683;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104680570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8018;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104680602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104680603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9168;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104680606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104680619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.8164;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104680650 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104680660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104680739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104680818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104680857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104680889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2966;AVGPOST=0.9955;RSQ=0.9915;ERATE=0.0007;THETA=0.0011;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 104680955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3001;AVGPOST=0.9953;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 104681089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0858;AVGPOST=0.9973;RSQ=0.9866;ERATE=0.0006;THETA=0.0064;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 104681101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5970;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104681169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6384;ERATE=0.0004;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104681302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9549;ERATE=0.0005;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104681303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104681361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9376;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104681520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1445;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0005;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 104681605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1034;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0021;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 104681613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1045;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 104681679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5551;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104681723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104681730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0414;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104681866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0089;AVGPOST=0.9949;RSQ=0.8038;ERATE=0.0004;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104681895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104681902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8141;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104681931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2899;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 104681940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104681941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104681994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1072;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104681998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104682002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104682016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104682033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9160;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104682073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104682119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0452;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 104682137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9305;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104682168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104682187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6402;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104682224 . TC T 578 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9175;ERATE=0.0003;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104682275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0330;AVGPOST=0.9980;RSQ=0.9778;ERATE=0.0004;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104682276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7892;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104682294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104682297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1071;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104682309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104682378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5554;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104682449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9429;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104682467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104682523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104682524 . AC A 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7865;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104682533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.1282;AVGPOST=0.9880;RSQ=0.9589;ERATE=0.0016;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 104682621 . AT A 67 PASS INDEL;BAVGPOST=0.979;BRSQ=0.426;LDAF=0.0426;AVGPOST=0.9453;RSQ=0.4717;ERATE=0.0090;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104682694 . CAA C 388 PASS INDEL;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7800;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104682758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104682766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7637;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104682947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1198;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 104683023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104683058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1334;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 104683085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1317;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104683107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9194;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104683131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.5013;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104683230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104683268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1320;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0008;THETA=0.0006;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 104683276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104683391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6012;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104683540 rs3071892 TTAAC T 16427 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1348;AVGPOST=0.9977;RSQ=0.9916;ERATE=0.0005;THETA=0.0009;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 104683753 . G GA 1114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9753;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104683770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1318;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104684200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7897;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104684239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6417;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104684243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1208;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 104684285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6828;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104684292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0078;AVGPOST=0.9975;RSQ=0.8736;ERATE=0.0007;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104684507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1423;AVGPOST=0.9926;RSQ=0.9737;ERATE=0.0003;THETA=0.0010;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 104684568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104684592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104684605 . CTA C 5276 PASS INDEL;BAVGPOST=0.980;BRSQ=0.955;LDAF=0.3041;AVGPOST=0.9822;RSQ=0.9674;ERATE=0.0017;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 104684622 rs113988588 TATA T 31492 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3103;AVGPOST=0.9898;RSQ=0.9814;ERATE=0.0010;THETA=0.0030;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 104684623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7926;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104684721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9451;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104684802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104684846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1316;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0007;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1317;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104685188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0097;AVGPOST=0.9948;RSQ=0.8154;ERATE=0.0005;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104685219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.617;LDAF=0.0068;AVGPOST=0.9954;RSQ=0.7227;ERATE=0.0012;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104685229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3107;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0006;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 104685312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1320;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0006;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1319;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685375 . A AG 7580 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1321;AVGPOST=0.9974;RSQ=0.9908;ERATE=0.0007;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1315;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0007;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6642;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104685469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104685482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8938;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104685632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104685650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7060;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104685678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5178;AVGPOST=0.9944;RSQ=0.9922;ERATE=0.0004;THETA=0.0006;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 104685774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1316;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104685793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8606;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104685807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7422;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104685936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104685941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104685987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5173;AVGPOST=0.9928;RSQ=0.9896;ERATE=0.0005;THETA=0.0005;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 104686076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9987;RSQ=0.9582;ERATE=0.0004;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104686101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686107 rs35954812 ATTT A 16326 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1318;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104686111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6288;ERATE=0.0003;THETA=0.0055;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104686211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5592;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104686298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8802;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104686349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1323;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0004;THETA=0.0018;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104686489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686655 . C CG 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104686722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6622;ERATE=0.0004;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104686867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9207;ERATE=0.0004;THETA=0.0100;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104687016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8015;ERATE=0.0003;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104687102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9448;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104687132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5211;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104687134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104687167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1871;AVGPOST=0.9904;RSQ=0.9775;ERATE=0.0036;THETA=0.0013;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 104687176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0004;THETA=0.0226;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104687190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104687246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104687419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104687427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9392;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104687537 . AG A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6732;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104687540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6969;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104687624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104687704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104687912 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104687966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5869;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104688067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688125 . TC T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688342 . AT A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104688432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6670;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1602;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 104688463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104688480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104688489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7159;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104688588 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4659;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104688593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9986;RSQ=0.9578;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104688635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104688863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7394;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104688977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5534;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104689175 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104689241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104689369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2305;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 104689520 . CCAG C 787 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7156;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2300;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 104689750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7849;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104689795 . CAACTGCA C 428 PASS INDEL;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7383;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104689969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104690112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104690268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104690298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104690498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104690608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7729;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104690621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104690647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104690653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1604;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 104690755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6451;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104690758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104690818 rs71839577 CTG C 212 PASS INDEL;BAVGPOST=0.976;BRSQ=0.646;LDAF=0.0641;AVGPOST=0.9318;RSQ=0.5450;ERATE=0.0156;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104690848 . T TGTGC 2519 PASS INDEL;BAVGPOST=0.978;BRSQ=0.817;LDAF=0.0742;AVGPOST=0.9506;RSQ=0.7293;ERATE=0.0107;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 104690869 rs57269476 T TGC 4280 PASS INDEL;BAVGPOST=0.979;BRSQ=0.828;LDAF=0.0534;AVGPOST=0.9717;RSQ=0.8031;ERATE=0.0033;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 104690871 . T TGC 7464 PASS INDEL;BAVGPOST=0.951;BRSQ=0.861;LDAF=0.1582;AVGPOST=0.9358;RSQ=0.8487;ERATE=0.0084;THETA=0.0005;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 104690873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.902;LDAF=0.1288;AVGPOST=0.9590;RSQ=0.8816;ERATE=0.0065;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 104690875 rs72162008 GTGTT G 25409 PASS INDEL;BAVGPOST=0.959;BRSQ=0.921;LDAF=0.3552;AVGPOST=0.9151;RSQ=0.8659;ERATE=0.0276;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 104690898 rs72367592 CTTAG C 29003 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2211;AVGPOST=0.9867;RSQ=0.9709;ERATE=0.0039;THETA=0.0008;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 104690916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2304;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 104691070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5033;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104691158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4296;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104691291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2147;AVGPOST=0.9971;RSQ=0.9932;ERATE=0.0006;THETA=0.0003;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 104691360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104691697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7034;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104691735 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104691802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104691818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2202;AVGPOST=0.9972;RSQ=0.9935;ERATE=0.0006;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 104691901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9245;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104691922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2194;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 104691972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104692001 . CT C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.5030;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104692016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104692078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5643;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104692129 rs35228889 CG C 19007 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2201;AVGPOST=0.9951;RSQ=0.9895;ERATE=0.0010;THETA=0.0006;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 104692177 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104692410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0045;AVGPOST=0.9969;RSQ=0.7431;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104692413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1635;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 104692441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6673;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104692498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9473;ERATE=0.0002;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104692615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104692724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104692741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0112;AVGPOST=0.9971;RSQ=0.9029;ERATE=0.0002;THETA=0.0144;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104692814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9208;ERATE=0.0007;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104692835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0331;AVGPOST=0.9985;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104692913 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104692975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6714;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1965;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0006;THETA=0.0005;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 104693019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0002;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104693043 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0002;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104693087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104693112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7511;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104693362 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8377;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104693506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693534 . G GT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104693612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104693613 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5957;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104693633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0299;AVGPOST=0.9958;RSQ=0.9430;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104693687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104693702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104693715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104693917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0401;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104693964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2879;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 104694082 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6359;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104694161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104694163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694172 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8408;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104694231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104694260 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694369 . ATCC A 16685 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0996;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 104694471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0724;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104694620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7148;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104694802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7947;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104694808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104694941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7592;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104694960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8614;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104694974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104695014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5656;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104695116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7233;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 104695222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2501;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 104695311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8331;AVGPOST=0.9938;RSQ=0.9829;ERATE=0.0009;THETA=0.0001;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 104695318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.5852;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104695326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0165;AVGPOST=0.9939;RSQ=0.8636;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104695484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104695634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1133;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 104695805 . TAG T 20 PASS INDEL;BAVGPOST=0.978;BRSQ=0.085;LDAF=0.0103;AVGPOST=0.9883;RSQ=0.5304;ERATE=0.0008;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104695847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104695946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7233;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104696124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1882;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0004;THETA=0.0001;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 104696251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104696386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5915;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104696434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104696504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7252;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104696509 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104696586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104696703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104696706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8088;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104696737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104696741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104696754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6830;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104696766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2481;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 104697026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104697170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104697191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104697300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6492;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104697309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104697361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7917;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104697462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0838;AVGPOST=0.9985;RSQ=0.9929;ERATE=0.0004;THETA=0.0008;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 104697563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1698;AVGPOST=0.9980;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 104697564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104697595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 104697645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104697705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0222;AVGPOST=0.9992;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104697732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6644;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104697795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4110;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0008;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 104697855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104697900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8727;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104698002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4127;AVGPOST=0.9960;RSQ=0.9930;ERATE=0.0010;THETA=0.0004;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 104698110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7760;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104698127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0302;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104698156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3289;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0006;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 104698261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2739;AVGPOST=0.9932;RSQ=0.9863;ERATE=0.0015;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 104698368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4099;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 104698385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9979;RSQ=0.9803;ERATE=0.0005;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104698462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1698;AVGPOST=0.9972;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 104698481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0224;AVGPOST=0.9987;RSQ=0.9731;ERATE=0.0005;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104698488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104698666 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2802;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104698709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104698722 . TAAG T 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0050;AVGPOST=0.9962;RSQ=0.6673;ERATE=0.0012;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104698867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104698949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104699000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104699001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104699097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104699173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2074;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 104699402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104699435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0828;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104699485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104699527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8170;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104699549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8755;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104699673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104699771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2769;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 104699823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104699854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104699900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104699908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7068;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104699940 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104700012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2075;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 104700120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.2952;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104700155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0829;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104700305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104700319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104700333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0829;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104700628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104700650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104700661 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104700758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8219;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104700795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0829;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0024;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104700810 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104700866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104700977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.946;LDAF=0.0520;AVGPOST=0.9936;RSQ=0.9567;ERATE=0.0004;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104701043 . AG A 114 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5765;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104701058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9561;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104701168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6944;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104701175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0063;AVGPOST=0.9979;RSQ=0.8883;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104701250 . TA T 70 PASS INDEL;BAVGPOST=0.630;BRSQ=0.014;LDAF=0.2133;AVGPOST=0.7518;RSQ=0.3951;ERATE=0.0092;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 104701515 . TA T 1157 PASS INDEL;BAVGPOST=0.770;BRSQ=0.263;LDAF=0.2317;AVGPOST=0.7388;RSQ=0.3945;ERATE=0.0190;THETA=0.0004;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 104701517 rs71874707 T TA 3115 PASS INDEL;BAVGPOST=0.623;BRSQ=0.349;LDAF=0.5284;AVGPOST=0.6672;RSQ=0.4449;ERATE=0.0272;THETA=0.0005;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 104701519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.878;LDAF=0.0392;AVGPOST=0.9976;RSQ=0.9727;ERATE=0.0006;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104701551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.459;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4996;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104701561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.950;LDAF=0.0846;AVGPOST=0.9930;RSQ=0.9660;ERATE=0.0010;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 104701564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.1643;AVGPOST=0.9871;RSQ=0.9645;ERATE=0.0012;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 104701610 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2817;AVGPOST=0.9883;RSQ=0.9767;ERATE=0.0014;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 104701629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0154;AVGPOST=0.9977;RSQ=0.9293;ERATE=0.0006;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104701679 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.944;LDAF=0.4394;AVGPOST=0.9707;RSQ=0.9550;ERATE=0.0039;THETA=0.0003;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 104701703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8004;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104701845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5169;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104701925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104701946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0300;AVGPOST=0.9952;RSQ=0.9460;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104702013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6554;AVGPOST=0.9929;RSQ=0.9904;ERATE=0.0009;THETA=0.0010;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 104702068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104702173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4092;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0010;THETA=0.0009;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 104702369 . G GC 7319 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0843;AVGPOST=0.9963;RSQ=0.9794;ERATE=0.0007;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 104702419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9362;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104702552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0464;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0004;THETA=0.0013;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 104702635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104702677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104702936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9437;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104702941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104703092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9985;RSQ=0.9703;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104703213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104703233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7277;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104703296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104703386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104703416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9352;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104703728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6530;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104703797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0478;AVGPOST=0.9982;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 104703947 . G GT 194 PASS INDEL;BAVGPOST=0.980;BRSQ=0.492;LDAF=0.0323;AVGPOST=0.9586;RSQ=0.4665;ERATE=0.0107;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104704066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9504;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104704130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104704186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8182;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104704290 . AC A 1178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9654;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104704325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104704341 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9605;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104704492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104704555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8720;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104704583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104704585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8042;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104704778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8509;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104704822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6559;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104704933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104705061 . A AC 6419 PASS INDEL;BAVGPOST=0.859;BRSQ=0.679;LDAF=0.2595;AVGPOST=0.8538;RSQ=0.7280;ERATE=0.0202;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 104705125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.903;LDAF=0.3269;AVGPOST=0.9466;RSQ=0.9124;ERATE=0.0137;THETA=0.0008;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 104705126 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.791;LDAF=0.0249;AVGPOST=0.9830;RSQ=0.7321;ERATE=0.0049;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104705127 . AC A 1068 PASS INDEL;BAVGPOST=0.990;BRSQ=0.784;LDAF=0.0307;AVGPOST=0.9794;RSQ=0.7343;ERATE=0.0037;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104705135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0449;AVGPOST=0.9986;RSQ=0.9886;ERATE=0.0004;THETA=0.0010;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 104705160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104705187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104705316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0453;AVGPOST=0.9979;RSQ=0.9848;ERATE=0.0004;THETA=0.0037;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 104705390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.904;LDAF=0.0377;AVGPOST=0.9967;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 104705558 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8867;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104705583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104705605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104705634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8253;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104705666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8840;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104705672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104705807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3217;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 104705826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 104705834 rs75205061 AC A 1228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0086;AVGPOST=0.9951;RSQ=0.7780;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104705842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104705855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4418;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0008;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 104705906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104706002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104706212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104706271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8122;ERATE=0.0012;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104706491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104706581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104706750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8836;ERATE=0.0011;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104706810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104706835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0788;AVGPOST=0.9972;RSQ=0.9837;ERATE=0.0015;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 104706883 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8087;ERATE=0.0008;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104706943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104707172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0452;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 104707218 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5749;AVGPOST=0.9963;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 104707341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104707536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104707576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104707590 . T TA 4195 PASS INDEL;BAVGPOST=0.982;BRSQ=0.838;LDAF=0.0481;AVGPOST=0.9725;RSQ=0.7806;ERATE=0.0086;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104707698 rs67988163 AC A 2419 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0467;AVGPOST=0.9933;RSQ=0.9451;ERATE=0.0017;THETA=0.0031;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 104707707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0111;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104707758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104707812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9519;ERATE=0.0003;THETA=0.0033;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104707829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104707830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104707854 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104707957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104708301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104708397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104708473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9297;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104708487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0561;AVGPOST=0.9968;RSQ=0.9758;ERATE=0.0003;THETA=0.0021;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 104708527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104708550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104708618 . G GAT 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104708633 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.4294;AVGPOST=0.9851;RSQ=0.9814;ERATE=0.0004;THETA=0.0043;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 104708670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0005;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104708705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.916;LDAF=0.9380;AVGPOST=0.9796;RSQ=0.8692;ERATE=0.0032;THETA=0.0020;AC=2060;AN=2184 GT:DS:GL:BD 0.94322342 1
1 104708749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6248;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104709031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9818;ERATE=0.0003;THETA=0.0054;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104709120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8118;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104709126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0059;AVGPOST=0.9988;RSQ=0.9072;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104709218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0123;AVGPOST=0.9990;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104709223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104709253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8290;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104709327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8229;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104709409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7297;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104709410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.1005;AVGPOST=0.9973;RSQ=0.9894;ERATE=0.0006;THETA=0.0072;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104709457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0073;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104709674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0668;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0004;THETA=0.0044;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 104709710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0107;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104709829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709831 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104709888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104709904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8783;ERATE=0.0009;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104709916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0240;AVGPOST=0.9987;RSQ=0.9805;ERATE=0.0006;THETA=0.0037;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104710007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0162;AVGPOST=0.9992;RSQ=0.9822;ERATE=0.0005;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104710062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0079;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104710114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104710179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104710203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0185;AVGPOST=0.9940;RSQ=0.8754;ERATE=0.0006;THETA=0.0021;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104710335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.615;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.5791;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104710486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.797;LDAF=0.0123;AVGPOST=0.9888;RSQ=0.6407;ERATE=0.0008;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104710490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4262;ERATE=0.0005;THETA=0.0123;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104710541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104710674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104710763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104710853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104710909 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104710946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0177;AVGPOST=0.9961;RSQ=0.9134;ERATE=0.0004;THETA=0.0085;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104711053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4408;ERATE=0.0006;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104711073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0055;AVGPOST=0.9969;RSQ=0.7886;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104711133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.7878;ERATE=0.0005;THETA=0.0122;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104711142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0064;AVGPOST=0.9961;RSQ=0.7583;ERATE=0.0007;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104711156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6413;ERATE=0.0005;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104711186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.501;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3653;ERATE=0.0007;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104711281 . AG A 29148 PASS INDEL;BAVGPOST=0.996;BRSQ=0.480;LDAF=0.9952;AVGPOST=0.9937;RSQ=0.4629;ERATE=0.0006;THETA=0.0036;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 104711346 . A AG 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.4553;ERATE=0.0005;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104711354 . CCT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104711546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5533;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104711648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5431;ERATE=0.0006;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104711668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8924;ERATE=0.0003;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104711783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.7267;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104711977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104712106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7965;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104712164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0536;AVGPOST=0.9939;RSQ=0.9524;ERATE=0.0005;THETA=0.0007;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 104712166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0068;AVGPOST=0.9980;RSQ=0.8716;ERATE=0.0009;THETA=0.0044;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104712249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9034;ERATE=0.0003;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104712256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104712341 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6110;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104712406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0146;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104712495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9395;ERATE=0.0003;THETA=0.0048;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104712528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0098;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104712643 . ACTGT A 5230 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0249;AVGPOST=0.9973;RSQ=0.9596;ERATE=0.0004;THETA=0.0038;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104712680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.2635;AVGPOST=0.9852;RSQ=0.9733;ERATE=0.0009;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 104712732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.954;LDAF=0.2482;AVGPOST=0.9894;RSQ=0.9802;ERATE=0.0005;THETA=0.0003;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 104712797 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.950;LDAF=0.2589;AVGPOST=0.9865;RSQ=0.9744;ERATE=0.0010;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 104712828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9726;ERATE=0.0005;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104712839 . C CA 956 PASS INDEL;BAVGPOST=0.695;BRSQ=0.078;LDAF=0.7612;AVGPOST=0.6831;RSQ=0.2810;ERATE=0.0176;THETA=0.0004;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 104712979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4440;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7327;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 104713092 rs58628498 TA T 68366 PASS INDEL;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.7170;AVGPOST=0.9716;RSQ=0.9478;ERATE=0.0090;THETA=0.0006;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 104713112 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5971;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104713138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4848;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104713262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104713263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104713384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104713420 . C CT 11 PASS INDEL;BAVGPOST=0.992;BRSQ=0.440;LDAF=0.0208;AVGPOST=0.9693;RSQ=0.3950;ERATE=0.0055;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104713592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104713703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2929;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 104713737 . A AT 22 PASS INDEL;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.5980;ERATE=0.0010;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104713786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2553;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 104713841 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104713940 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0092;AVGPOST=0.9968;RSQ=0.8720;ERATE=0.0009;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104714057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104714294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7535;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104714354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9735;ERATE=0.0003;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104714622 . CTTTG C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4452;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8010;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104714808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.2944;AVGPOST=0.9804;RSQ=0.9618;ERATE=0.0015;THETA=0.0007;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 104714836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3976;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104714961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9665;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104715088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0230;AVGPOST=0.9931;RSQ=0.8826;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104715150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104715211 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0040;AVGPOST=0.9961;RSQ=0.6494;ERATE=0.0015;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104715567 . CT C 660 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9475;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104715760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9980;RSQ=0.9470;ERATE=0.0007;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104715781 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.828;LDAF=0.0438;AVGPOST=0.9833;RSQ=0.8479;ERATE=0.0005;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104715814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2651;AVGPOST=0.9967;RSQ=0.9927;ERATE=0.0007;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 104715899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104716128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104716219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104716222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104716226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104716251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9516;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104716288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104716422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.6960;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104716455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104716732 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2651;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 104716788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7910;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104716872 . T TA 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104716916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0304;AVGPOST=0.9962;RSQ=0.9505;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104717077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2673;AVGPOST=0.9965;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 104717133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2830;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0006;THETA=0.0004;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 104717275 rs3999763 TAAATAA T 32303 PASS INDEL;BAVGPOST=0.960;BRSQ=0.919;LDAF=0.2559;AVGPOST=0.9824;RSQ=0.9680;ERATE=0.0017;THETA=0.0003;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 104717401 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7625;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104717447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9155;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104717463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104717495 . CAT C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5153;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104717526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2660;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 104717590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6544;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104717668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104717734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0370;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 104717848 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0343;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104717859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2261;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0014;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 104717963 . AC A 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7497;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104717981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7478;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104718206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104718278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9430;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104718311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104718417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0245;AVGPOST=0.9992;RSQ=0.9855;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104718441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104718581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7503;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104718774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0405;AVGPOST=0.9937;RSQ=0.9475;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104718784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3942;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104718845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.789;LDAF=0.0089;AVGPOST=0.9968;RSQ=0.8599;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104718871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104718980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104719102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104719176 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104719229 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=0.9985;RSQ=0.9402;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104719271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6905;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104719373 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7873;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104719378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104719403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8576;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104719501 . A ATC 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104719545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104719599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0802;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 104719656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8987;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104719662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6948;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104719663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0344;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104719693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104719814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0346;AVGPOST=0.9992;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104719856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2265;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 104719912 . T TG 330 PASS INDEL;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7505;ERATE=0.0008;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104720018 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104720084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104720086 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104720147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.863;LDAF=0.0129;AVGPOST=0.9974;RSQ=0.9229;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104720149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7804;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104720278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104720312 . CAA C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5548;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104720406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104720421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0344;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104720699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8234;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104720705 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104720768 . T TG 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104720808 . TA T 266 PASS INDEL;BAVGPOST=0.996;BRSQ=0.634;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7847;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104720881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8361;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104720897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104720950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104720973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5254;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104720990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0379;AVGPOST=0.9984;RSQ=0.9819;ERATE=0.0004;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104721017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3177;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104721037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2248;AVGPOST=0.9961;RSQ=0.9918;ERATE=0.0006;THETA=0.0006;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 104721095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8361;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104721204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5641;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104721271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0802;AVGPOST=0.9978;RSQ=0.9877;ERATE=0.0008;THETA=0.0027;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 104721362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5048;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104721421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9449;ERATE=0.0003;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104721455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6930;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104721476 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8076;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104721622 . T TA 167 PASS INDEL;BAVGPOST=0.988;BRSQ=0.190;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5341;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104721698 . A AT 2338 PASS INDEL;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0915;AVGPOST=0.9770;RSQ=0.8955;ERATE=0.0031;THETA=0.0006;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 104721702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4230;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104721750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5281;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104721780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0383;AVGPOST=0.9991;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104721802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9377;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104721847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5098;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104721906 rs72392539 GAAAACA G 12203 PASS INDEL;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2482;AVGPOST=0.9753;RSQ=0.9546;ERATE=0.0015;THETA=0.0004;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 104721924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0795;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 104721994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104722062 . TC T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5499;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104722165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0379;AVGPOST=0.9986;RSQ=0.9840;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104722360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8465;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104722459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0005;THETA=0.0048;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104722512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8504;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104722550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7585;AVGPOST=0.9945;RSQ=0.9897;ERATE=0.0004;THETA=0.0006;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 104722577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4343;ERATE=0.0006;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104722632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.819;LDAF=0.5104;AVGPOST=0.8707;RSQ=0.8174;ERATE=0.0092;THETA=0.0083;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 104722655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.746;LDAF=0.0077;AVGPOST=0.9967;RSQ=0.8347;ERATE=0.0005;THETA=0.0185;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104722707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4401;ERATE=0.0005;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104722712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4359;ERATE=0.0004;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104722733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104722741 . ATAT A 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6475;ERATE=0.0005;THETA=0.0096;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104722761 rs61117416 TTTA T 2742 PASS INDEL;BAVGPOST=0.903;BRSQ=0.753;LDAF=0.2178;AVGPOST=0.9070;RSQ=0.7992;ERATE=0.0016;THETA=0.0049;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 104722770 rs61117416 TA T 1305 PASS INDEL;BAVGPOST=0.903;BRSQ=0.761;LDAF=0.2211;AVGPOST=0.9085;RSQ=0.8063;ERATE=0.0007;THETA=0.0031;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 104722772 rs61117416 AAT A 6392 PASS INDEL;BAVGPOST=0.902;BRSQ=0.760;LDAF=0.2270;AVGPOST=0.9070;RSQ=0.8074;ERATE=0.0016;THETA=0.0212;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 104722773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.835;LDAF=0.3489;AVGPOST=0.8979;RSQ=0.8345;ERATE=0.0075;THETA=0.0205;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 104722834 . AAC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0005;THETA=0.0202;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104722954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5430;ERATE=0.0007;THETA=0.0262;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104722964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0133;AVGPOST=0.9961;RSQ=0.8943;ERATE=0.0005;THETA=0.0068;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104723026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104723030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0049;AVGPOST=0.9953;RSQ=0.6088;ERATE=0.0007;THETA=0.0236;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104723154 . G GA 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5940;ERATE=0.0003;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104723157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9745;ERATE=0.0003;THETA=0.0138;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104723433 . A AG 11432 PASS INDEL;BAVGPOST=0.865;BRSQ=0.741;LDAF=0.5963;AVGPOST=0.8421;RSQ=0.7476;ERATE=0.0252;THETA=0.0038;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 104723540 rs76067284 G GT 62224 PASS INDEL;BAVGPOST=0.968;BRSQ=0.941;LDAF=0.7197;AVGPOST=0.9516;RSQ=0.9136;ERATE=0.0004;THETA=0.0091;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 104723541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.863;LDAF=0.0108;AVGPOST=0.9958;RSQ=0.8456;ERATE=0.0003;THETA=0.0047;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104723583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0183;AVGPOST=0.9967;RSQ=0.9354;ERATE=0.0003;THETA=0.0045;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104723759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104723843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4934;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104723928 . GC G 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.5981;ERATE=0.0011;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104724013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1074;AVGPOST=0.9958;RSQ=0.9835;ERATE=0.0003;THETA=0.0017;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 104724123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4626;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104724128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104724229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8919;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104724383 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0121;AVGPOST=0.9984;RSQ=0.9476;ERATE=0.0003;THETA=0.0045;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104724461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104724485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9665;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104724504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104724529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104724565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.4922;ERATE=0.0005;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104724699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0125;AVGPOST=0.9963;RSQ=0.8951;ERATE=0.0003;THETA=0.0052;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104724754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.949;LDAF=0.1084;AVGPOST=0.9935;RSQ=0.9709;ERATE=0.0007;THETA=0.0051;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 104724822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5181;ERATE=0.0004;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104724836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.1083;AVGPOST=0.9964;RSQ=0.9847;ERATE=0.0007;THETA=0.0022;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104724895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7498;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104724945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.4965;AVGPOST=0.9904;RSQ=0.9877;ERATE=0.0004;THETA=0.0006;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 104724968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9192;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104725135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.1081;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0004;THETA=0.0015;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 104725166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.1074;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104725186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0149;AVGPOST=0.9983;RSQ=0.9593;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104725223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4882;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104725279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725281 . A AT 1401 PASS INDEL;BAVGPOST=0.984;BRSQ=0.874;LDAF=0.0540;AVGPOST=0.9859;RSQ=0.8941;ERATE=0.0007;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 104725318 . TTTG T 30 PASS INDEL;BAVGPOST=0.997;BRSQ=0.580;LDAF=0.0066;AVGPOST=0.9925;RSQ=0.5324;ERATE=0.0027;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104725496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725530 . CAAGA C 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104725641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0180;AVGPOST=0.9985;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104725664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9612;ERATE=0.0004;THETA=0.0033;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104725677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4734;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104725748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6488;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104725850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6103;AVGPOST=0.9943;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 104725865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104725922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8451;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104726035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2601;AVGPOST=0.9935;RSQ=0.9878;ERATE=0.0004;THETA=0.0007;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 104726092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104726098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.8064;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104726218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104726300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0199;AVGPOST=0.9990;RSQ=0.9828;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104726330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9987;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104726356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0198;AVGPOST=0.9993;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104726377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0217;AVGPOST=0.9991;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104726414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0217;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104726419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9846;ERATE=0.0003;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104726452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7515;ERATE=0.0004;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104726523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0652;AVGPOST=0.9947;RSQ=0.9677;ERATE=0.0004;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 104726582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104726651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9811;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104726652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2021;AVGPOST=0.9945;RSQ=0.9868;ERATE=0.0006;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 104726693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104726734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7394;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104726796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104726827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104726936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7379;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104727025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8210;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104727083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104727215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104727270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8005;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104727410 . A AC 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.4566;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104727436 . AC A 2174 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104727497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104727562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8536;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104727617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0054;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 104727954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.462;BRSQ=0.151;LDAF=0.4306;AVGPOST=0.6362;RSQ=0.3892;ERATE=0.0162;THETA=0.0007;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 104728332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104728421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0060;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 104728473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104728553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3726;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104728633 . TATAAG T 2706 PASS INDEL;BAVGPOST=0.990;BRSQ=0.854;LDAF=0.0371;AVGPOST=0.9972;RSQ=0.9658;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104728648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104728695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4694;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104728747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8633;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104728757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4332;AVGPOST=0.9947;RSQ=0.9926;ERATE=0.0012;THETA=0.0008;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 104728784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104728815 . T TC 1083 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0282;AVGPOST=0.9957;RSQ=0.9447;ERATE=0.0006;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104728987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0261;AVGPOST=0.9978;RSQ=0.9709;ERATE=0.0004;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104728988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5565;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104729029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7946;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104729084 rs35296926 AG A 28867 PASS INDEL;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3937;AVGPOST=0.9913;RSQ=0.9872;ERATE=0.0006;THETA=0.0002;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 104729170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3935;AVGPOST=0.9918;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 104729183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3813;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104729191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0210;AVGPOST=0.9983;RSQ=0.9720;ERATE=0.0004;THETA=0.0048;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104729422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0350;AVGPOST=0.9984;RSQ=0.9834;ERATE=0.0003;THETA=0.0014;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 104729426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104729481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104729483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104729530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104729617 . AATTT A 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104729730 . CT C 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104729839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6211;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104729854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9572;ERATE=0.0004;THETA=0.0029;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104729898 . TTC T 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7063;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104729916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8317;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104729999 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4924;ERATE=0.0006;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104730003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0302;AVGPOST=0.9983;RSQ=0.9783;ERATE=0.0004;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104730083 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9279;AVGPOST=0.9989;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 104730130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7100;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104730160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104730241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4215;AVGPOST=0.9952;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 104730246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4754;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104730280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104730350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0390;AVGPOST=0.9993;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104730398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104730531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4526;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104730618 . TA T 164 PASS INDEL;BAVGPOST=0.930;BRSQ=0.358;LDAF=0.0903;AVGPOST=0.8782;RSQ=0.4062;ERATE=0.0142;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 104730731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.525;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5598;ERATE=0.0009;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104730767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104730848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9286;AVGPOST=0.9982;RSQ=0.9889;ERATE=0.0004;THETA=0.0004;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 104730983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104731114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6088;ERATE=0.0008;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104731144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104731237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4141;AVGPOST=0.9962;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 104731340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104731363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104731462 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0634;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 104731474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4897;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104731517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104731548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104731571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104731721 . T TA 14 PASS INDEL;BAVGPOST=0.992;BRSQ=0.505;LDAF=0.0184;AVGPOST=0.9741;RSQ=0.4249;ERATE=0.0064;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104731745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104731812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0109;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104731817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0278;AVGPOST=0.9982;RSQ=0.9770;ERATE=0.0004;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104731964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9275;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104732152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4780;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.869;LDAF=0.0178;AVGPOST=0.9970;RSQ=0.9305;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104732181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104732300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0432;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 104732556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4302;AVGPOST=0.9940;RSQ=0.9905;ERATE=0.0021;THETA=0.0009;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 104732657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6992;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104732824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0128;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104732843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104732930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.629;LDAF=0.9528;AVGPOST=0.9547;RSQ=0.6037;ERATE=0.0168;THETA=0.0015;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 104733114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9908;AVGPOST=0.9995;RSQ=0.9738;ERATE=0.0004;THETA=0.0007;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 104733141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.554;LDAF=0.0171;AVGPOST=0.9804;RSQ=0.5541;ERATE=0.0073;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104733284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0304;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104733286 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.9907;AVGPOST=0.9997;RSQ=0.9836;ERATE=0.0003;THETA=0.0013;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 104733295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9350;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104733412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104733516 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.601;LDAF=0.8331;AVGPOST=0.8654;RSQ=0.5869;ERATE=0.0471;THETA=0.0004;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 104733743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.894;LDAF=0.5500;AVGPOST=0.9604;RSQ=0.9390;ERATE=0.0014;THETA=0.0005;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 104733749 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104733826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.9893;AVGPOST=0.9970;RSQ=0.9010;ERATE=0.0004;THETA=0.0006;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 104733865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7369;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104733990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5908;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104734033 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9493;ERATE=0.0003;THETA=0.0024;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104734044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8548;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104734126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104734166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7642;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104734170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104734343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9909;AVGPOST=0.9991;RSQ=0.9613;ERATE=0.0004;THETA=0.0030;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 104734419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8762;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104734443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.7156;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104734573 . T TG 1249 PASS INDEL;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0180;AVGPOST=0.9966;RSQ=0.9178;ERATE=0.0006;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104734611 . T TC 245 PASS INDEL;BAVGPOST=0.608;BRSQ=0.007;LDAF=0.7971;AVGPOST=0.7124;RSQ=0.2541;ERATE=0.0137;THETA=0.0011;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 104734748 . TG T 1166 PASS INDEL;BAVGPOST=0.949;BRSQ=0.557;LDAF=0.0932;AVGPOST=0.9162;RSQ=0.6265;ERATE=0.0072;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 104735377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0987;AVGPOST=0.9967;RSQ=0.9847;ERATE=0.0006;THETA=0.0011;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 104735925 . ACT A 410 PASS INDEL;BAVGPOST=0.991;BRSQ=0.836;LDAF=0.0298;AVGPOST=0.9851;RSQ=0.8033;ERATE=0.0036;THETA=0.0031;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104736000 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104736040 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7098;ERATE=0.0004;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104736081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2602;AVGPOST=0.9888;RSQ=0.9789;ERATE=0.0009;THETA=0.0074;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 104736310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0986;AVGPOST=0.9974;RSQ=0.9918;ERATE=0.0003;THETA=0.0036;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104736333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.897;LDAF=0.1110;AVGPOST=0.9741;RSQ=0.9261;ERATE=0.0009;THETA=0.0059;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104736397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7477;ERATE=0.0007;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104736398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.0938;AVGPOST=0.9938;RSQ=0.9774;ERATE=0.0004;THETA=0.0039;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 104736400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0208;AVGPOST=0.9957;RSQ=0.9357;ERATE=0.0004;THETA=0.0013;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104736429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1624;AVGPOST=0.9922;RSQ=0.9787;ERATE=0.0005;THETA=0.0015;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 104736437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0285;AVGPOST=0.9971;RSQ=0.9639;ERATE=0.0005;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104736509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104736536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.838;LDAF=0.1156;AVGPOST=0.9741;RSQ=0.9265;ERATE=0.0009;THETA=0.0009;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 104736572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0051;AVGPOST=0.9970;RSQ=0.7870;ERATE=0.0004;THETA=0.0050;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104736645 . A AG 171 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8066;ERATE=0.0005;THETA=0.0065;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104736779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.852;LDAF=0.1551;AVGPOST=0.9640;RSQ=0.9012;ERATE=0.0014;THETA=0.0011;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 104736917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.437;LDAF=0.0058;AVGPOST=0.9922;RSQ=0.4538;ERATE=0.0009;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104736918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.594;LDAF=0.0570;AVGPOST=0.9711;RSQ=0.8372;ERATE=0.0011;THETA=0.0009;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 104736949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.755;LDAF=0.0267;AVGPOST=0.9924;RSQ=0.8945;ERATE=0.0006;THETA=0.0022;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104736951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.740;LDAF=0.0111;AVGPOST=0.9890;RSQ=0.6167;ERATE=0.0014;THETA=0.0025;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104737002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.861;LDAF=0.1009;AVGPOST=0.9770;RSQ=0.9219;ERATE=0.0016;THETA=0.0012;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104737006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4232;ERATE=0.0007;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104737089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.961;LDAF=0.5623;AVGPOST=0.9309;RSQ=0.9024;ERATE=0.0016;THETA=0.0013;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 104737100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.628;LDAF=0.0133;AVGPOST=0.9936;RSQ=0.8260;ERATE=0.0006;THETA=0.0037;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104737142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.0990;AVGPOST=0.9874;RSQ=0.9602;ERATE=0.0006;THETA=0.0008;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104737143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0977;AVGPOST=0.9973;RSQ=0.9899;ERATE=0.0004;THETA=0.0009;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104737175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.936;LDAF=0.1160;AVGPOST=0.9815;RSQ=0.9478;ERATE=0.0009;THETA=0.0050;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 104737205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104737251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6622;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104737319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.1073;AVGPOST=0.9890;RSQ=0.9678;ERATE=0.0009;THETA=0.0033;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104737420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7100;ERATE=0.0004;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104737422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.924;LDAF=0.1100;AVGPOST=0.9734;RSQ=0.9201;ERATE=0.0037;THETA=0.0033;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 104737505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0084;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104737630 . TC T 339 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104737815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0992;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0033;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104737829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104737857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0984;AVGPOST=0.9976;RSQ=0.9924;ERATE=0.0004;THETA=0.0056;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104737864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.954;LDAF=0.0879;AVGPOST=0.9928;RSQ=0.9753;ERATE=0.0004;THETA=0.0007;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 104737887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.913;LDAF=0.1005;AVGPOST=0.9757;RSQ=0.9207;ERATE=0.0044;THETA=0.0007;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 104737891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.7992;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104737933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0158;AVGPOST=0.9976;RSQ=0.9471;ERATE=0.0004;THETA=0.0046;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104737976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738050 . C CTT 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738062 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6762;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104738153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5122;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738154 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6658;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104738173 . AAAC A 240 PASS INDEL;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0133;AVGPOST=0.9869;RSQ=0.6114;ERATE=0.0052;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104738180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0974;AVGPOST=0.9970;RSQ=0.9896;ERATE=0.0004;THETA=0.0040;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 104738218 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0976;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0046;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 104738292 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1069;AVGPOST=0.9896;RSQ=0.9676;ERATE=0.0026;THETA=0.0091;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 104738462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0145;AVGPOST=0.9956;RSQ=0.8845;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104738524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5441;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104738779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.888;LDAF=0.1122;AVGPOST=0.9689;RSQ=0.9096;ERATE=0.0070;THETA=0.0033;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 104738781 rs111514408 C CA 41118 PASS INDEL;BAVGPOST=0.939;BRSQ=0.914;LDAF=0.5700;AVGPOST=0.9450;RSQ=0.9337;ERATE=0.0006;THETA=0.0006;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 104738818 . A AC 7163 PASS INDEL;BAVGPOST=0.934;BRSQ=0.895;LDAF=0.5008;AVGPOST=0.9295;RSQ=0.9135;ERATE=0.0006;THETA=0.0011;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 104738820 . A AC 5069 PASS INDEL;BAVGPOST=0.935;BRSQ=0.896;LDAF=0.5012;AVGPOST=0.9335;RSQ=0.9189;ERATE=0.0005;THETA=0.0016;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 104738821 . A AC 5057 PASS INDEL;BAVGPOST=0.930;BRSQ=0.888;LDAF=0.5004;AVGPOST=0.9265;RSQ=0.9098;ERATE=0.0012;THETA=0.0128;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 104738822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.925;LDAF=0.0873;AVGPOST=0.9798;RSQ=0.9272;ERATE=0.0015;THETA=0.0059;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 104738834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.930;LDAF=0.0830;AVGPOST=0.9869;RSQ=0.9514;ERATE=0.0004;THETA=0.0043;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 104738837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5943;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104738881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9337;ERATE=0.0004;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104738885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4655;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.0971;AVGPOST=0.9943;RSQ=0.9815;ERATE=0.0004;THETA=0.0061;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 104738984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0005;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104738991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0444;AVGPOST=0.9947;RSQ=0.9570;ERATE=0.0004;THETA=0.0026;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 104739025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6853;ERATE=0.0005;THETA=0.0093;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104739064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.937;LDAF=0.0952;AVGPOST=0.9913;RSQ=0.9726;ERATE=0.0005;THETA=0.0014;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 104739065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8290;ERATE=0.0004;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104739084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.0971;AVGPOST=0.9940;RSQ=0.9798;ERATE=0.0006;THETA=0.0084;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 104739134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8663;ERATE=0.0003;THETA=0.0069;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104739156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104739185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.944;LDAF=0.0866;AVGPOST=0.9894;RSQ=0.9647;ERATE=0.0005;THETA=0.0013;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 104739196 . TAA T 323 PASS INDEL;BAVGPOST=0.963;BRSQ=0.672;LDAF=0.0357;AVGPOST=0.9796;RSQ=0.8095;ERATE=0.0003;THETA=0.0008;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104739198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.945;LDAF=0.0879;AVGPOST=0.9904;RSQ=0.9682;ERATE=0.0005;THETA=0.0010;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 104739200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104739213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0976;AVGPOST=0.9970;RSQ=0.9893;ERATE=0.0003;THETA=0.0051;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 104739387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.789;LDAF=0.0412;AVGPOST=0.9793;RSQ=0.8058;ERATE=0.0014;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104739542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6216;ERATE=0.0008;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104739545 rs59373689 GA G 1573 PASS INDEL;BAVGPOST=0.948;BRSQ=0.614;LDAF=0.0885;AVGPOST=0.9183;RSQ=0.6042;ERATE=0.0161;THETA=0.0057;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 104739698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0984;AVGPOST=0.9974;RSQ=0.9904;ERATE=0.0007;THETA=0.0011;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104739784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.933;LDAF=0.1145;AVGPOST=0.9739;RSQ=0.9254;ERATE=0.0050;THETA=0.0054;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 104739996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.910;LDAF=0.5619;AVGPOST=0.9351;RSQ=0.9130;ERATE=0.0040;THETA=0.0032;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 104740019 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0980;AVGPOST=0.9968;RSQ=0.9887;ERATE=0.0004;THETA=0.0025;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 104740097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104740176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.938;LDAF=0.0892;AVGPOST=0.9901;RSQ=0.9664;ERATE=0.0004;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 104740358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.937;LDAF=0.0809;AVGPOST=0.9888;RSQ=0.9580;ERATE=0.0004;THETA=0.0016;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 104740371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.936;LDAF=0.0809;AVGPOST=0.9889;RSQ=0.9591;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 104740375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.935;LDAF=0.0818;AVGPOST=0.9876;RSQ=0.9523;ERATE=0.0004;THETA=0.0045;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 104740392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7791;ERATE=0.0006;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104740426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.733;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7236;ERATE=0.0004;THETA=0.0099;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104740448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.699;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8380;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104740450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.0964;AVGPOST=0.9845;RSQ=0.9490;ERATE=0.0008;THETA=0.0025;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 104740451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7205;ERATE=0.0005;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104740490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8092;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104740560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7113;ERATE=0.0007;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104740579 . GA G 371 PASS INDEL;BAVGPOST=0.948;BRSQ=0.483;LDAF=0.0667;AVGPOST=0.9243;RSQ=0.5061;ERATE=0.0218;THETA=0.0057;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104740631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5465;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104740755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104740773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104740870 rs74162251 C CA 3048 PASS INDEL;BAVGPOST=0.731;BRSQ=0.460;LDAF=0.2879;AVGPOST=0.7807;RSQ=0.6379;ERATE=0.0145;THETA=0.0045;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 104740992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104741030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7253;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104741059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9175;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104741120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104741148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0048;AVGPOST=0.9967;RSQ=0.7614;ERATE=0.0007;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104741195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104741196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9520;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104741230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.494;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4356;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104741252 . TATAG T 32225 PASS INDEL;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.2729;AVGPOST=0.9906;RSQ=0.9819;ERATE=0.0008;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 104741281 . G GTA 1293 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8985;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104741308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9765;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104741412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8357;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104741432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1193;AVGPOST=0.9971;RSQ=0.9895;ERATE=0.0004;THETA=0.0006;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 104741443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104741444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104741474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7298;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104741506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9529;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104741565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2825;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 104741656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2819;AVGPOST=0.9953;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 104741711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0128;AVGPOST=0.9993;RSQ=0.9773;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104741898 . ATG A 53 PASS INDEL;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0121;AVGPOST=0.9873;RSQ=0.5518;ERATE=0.0058;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104741926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104741988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4803;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0004;THETA=0.0017;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 104742090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8433;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104742092 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104742106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9306;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104742175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104742226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9903;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104742416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104742432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104742491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8741;ERATE=0.0014;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104742515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8170;ERATE=0.0004;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104742591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0150;AVGPOST=0.9982;RSQ=0.9555;ERATE=0.0004;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104742668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104742712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5650;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104742871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104743204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.8959;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104743475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0004;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104743508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104743520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1098;AVGPOST=0.9977;RSQ=0.9905;ERATE=0.0004;THETA=0.0084;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104743538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0004;THETA=0.0058;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104743600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7878;ERATE=0.0004;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104743645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104743679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8437;ERATE=0.0005;THETA=0.0070;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104743733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9015;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104743748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104743792 . CA C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6150;ERATE=0.0007;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104743906 rs72115730 TA T 141 PASS INDEL;BAVGPOST=0.997;BRSQ=0.447;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5046;ERATE=0.0008;THETA=0.0109;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104743916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0105;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104743958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8715;ERATE=0.0004;THETA=0.0127;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104743959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7539;ERATE=0.0004;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104744007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104744019 . T TA 2471 PASS INDEL;BAVGPOST=0.986;BRSQ=0.793;LDAF=0.0285;AVGPOST=0.9823;RSQ=0.7713;ERATE=0.0004;THETA=0.0065;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104744041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0115;AVGPOST=0.9981;RSQ=0.9278;ERATE=0.0003;THETA=0.0076;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104744164 . TCAAA T 663 PASS INDEL;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8579;ERATE=0.0004;THETA=0.0122;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104744352 . TTAG T 162 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0005;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104744373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0130;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104744450 . AT A 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7311;ERATE=0.0010;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104744525 . GACCT G 328 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7528;ERATE=0.0016;THETA=0.0133;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104744529 rs67801003 CCTT C 22611 PASS INDEL;BAVGPOST=0.983;BRSQ=0.943;LDAF=0.0879;AVGPOST=0.9856;RSQ=0.9508;ERATE=0.0004;THETA=0.0096;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 104744531 . CTT C 1010 PASS INDEL;BAVGPOST=0.971;BRSQ=0.867;LDAF=0.0664;AVGPOST=0.9788;RSQ=0.8950;ERATE=0.0005;THETA=0.0010;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 104744535 . ATT A 215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0011;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104744538 . GT G 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3531;ERATE=0.0004;THETA=0.0097;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104744561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104744644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104744664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8793;ERATE=0.0008;THETA=0.0134;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104744696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0059;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104744698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8504;ERATE=0.0012;THETA=0.0045;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104744710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.0254;AVGPOST=0.9965;RSQ=0.9503;ERATE=0.0006;THETA=0.0030;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104744777 . C CAT 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104744778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8282;ERATE=0.0009;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104744804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0004;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104744824 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104744858 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7792;ERATE=0.0004;THETA=0.0084;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104745221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9508;ERATE=0.0004;THETA=0.0112;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104745364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0004;THETA=0.0137;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104745433 . ACT A 1049 PASS INDEL;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8667;ERATE=0.0004;THETA=0.0039;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104745474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0093;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104745487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6079;ERATE=0.0005;THETA=0.0144;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104745511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8683;ERATE=0.0003;THETA=0.0225;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104745519 . TG T 80 PASS INDEL;BAVGPOST=0.973;BRSQ=0.380;LDAF=0.0376;AVGPOST=0.9468;RSQ=0.3952;ERATE=0.0069;THETA=0.0083;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104745539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.953;LDAF=0.1173;AVGPOST=0.9935;RSQ=0.9746;ERATE=0.0011;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 104745571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1154;AVGPOST=0.9963;RSQ=0.9861;ERATE=0.0004;THETA=0.0043;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 104745676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0251;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0005;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104745731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1403;AVGPOST=0.9963;RSQ=0.9868;ERATE=0.0005;THETA=0.0017;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 104745768 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0283;AVGPOST=0.9939;RSQ=0.9145;ERATE=0.0008;THETA=0.0025;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104745932 . AC A 1044 PASS INDEL;BAVGPOST=0.994;BRSQ=0.931;LDAF=0.0325;AVGPOST=0.9856;RSQ=0.8293;ERATE=0.0019;THETA=0.0025;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104745944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9014;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104746023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.663;LDAF=0.0104;AVGPOST=0.9914;RSQ=0.6509;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104746124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0272;AVGPOST=0.9969;RSQ=0.9581;ERATE=0.0005;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104746174 . GAAAA G 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104746179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104746204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4251;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104746273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104746284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6895;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104746309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104746486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9307;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104746653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.671;LDAF=0.0180;AVGPOST=0.9851;RSQ=0.6601;ERATE=0.0013;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104746767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0384;AVGPOST=0.9988;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104746797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5067;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104746800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0153;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104746994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104747045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5273;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104747096 . AAGG A 38 PASS INDEL;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0059;AVGPOST=0.9931;RSQ=0.5151;ERATE=0.0022;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104747099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5396;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104747168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104747262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4102;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104747388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0004;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104747441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104747519 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9982;RSQ=0.9777;ERATE=0.0005;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104747652 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104747744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104747865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9201;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104747910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0997;AVGPOST=0.9978;RSQ=0.9897;ERATE=0.0006;THETA=0.0007;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104748035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104748036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0148;AVGPOST=0.9945;RSQ=0.8656;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104748037 . GT G 159 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8020;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104748087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.6959;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104748135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7468;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104748163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.499;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4552;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104748201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8061;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104748270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4511;AVGPOST=0.9959;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 104748272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9234;ERATE=0.0004;THETA=0.0053;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104748300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104748401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104748443 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104748542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6023;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104748641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9355;ERATE=0.0004;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104748770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104748799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7414;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104748802 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.9038;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104748891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4248;AVGPOST=0.9953;RSQ=0.9934;ERATE=0.0006;THETA=0.0005;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 104748989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0227;AVGPOST=0.9993;RSQ=0.9854;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104749089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104749113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9681;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104749166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104749210 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7190;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104749330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9231;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104749374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0080;AVGPOST=0.9976;RSQ=0.8756;ERATE=0.0005;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104749377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3531;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104749423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3411;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104749449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0077;AVGPOST=0.9958;RSQ=0.8037;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104749468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.813;LDAF=0.0220;AVGPOST=0.9976;RSQ=0.9496;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104749532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0245;AVGPOST=0.9936;RSQ=0.9010;ERATE=0.0005;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104749533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.517;LDAF=0.0051;AVGPOST=0.9924;RSQ=0.4058;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104749563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8809;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104749584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104749594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8246;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104749648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9497;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104749687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5803;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104749744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7454;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104749754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0130;AVGPOST=0.9991;RSQ=0.9737;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104749791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0364;AVGPOST=0.9967;RSQ=0.9654;ERATE=0.0004;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104749858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104749918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9431;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104750104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104750123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3631;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8764;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104750459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104750497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4128;AVGPOST=0.9966;RSQ=0.9956;ERATE=0.0008;THETA=0.0035;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 104750531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104750656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104750677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9323;ERATE=0.0003;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104750692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7234;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104750724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4319;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750814 rs59039648 TG T 2972 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0279;AVGPOST=0.9977;RSQ=0.9669;ERATE=0.0005;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104750922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5230;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104750950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.963;LDAF=0.4200;AVGPOST=0.9817;RSQ=0.9748;ERATE=0.0008;THETA=0.0004;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 104750959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.972;LDAF=0.4182;AVGPOST=0.9781;RSQ=0.9694;ERATE=0.0014;THETA=0.0006;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 104750973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7527;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104751040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9162;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104751049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1061;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 104751105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104751154 . CAAAT C 66 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4408;ERATE=0.0006;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104751154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7267;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104751328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9520;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104751394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5366;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 104751399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104751408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104751416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5155;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 104751474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6675;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104751590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 104751641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1058;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 104751643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104751680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104751760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8983;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104751816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104751828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4319;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104751993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104752090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2030;AVGPOST=0.9958;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 104752095 . AT A 14 PASS INDEL;BAVGPOST=0.991;BRSQ=0.457;LDAF=0.0097;AVGPOST=0.9912;RSQ=0.6428;ERATE=0.0013;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104752122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5154;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0008;THETA=0.0009;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 104752141 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4626;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104752160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9322;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104752273 . CT C 5104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0389;AVGPOST=0.9975;RSQ=0.9774;ERATE=0.0004;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104752282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8989;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104752295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8771;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104752323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104752327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0269;AVGPOST=0.9990;RSQ=0.9861;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104752411 . T TGAGA 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104752643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104752715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104752766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104752807 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9110;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104752841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104752931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104753312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1842;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 104753357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6630;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104753365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.943;LDAF=0.5080;AVGPOST=0.9498;RSQ=0.9406;ERATE=0.0110;THETA=0.0004;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 104753464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8243;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104753545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9038;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104753563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1056;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 104753615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104753705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104753776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104753791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5811;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104753799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104753977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1824;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0003;THETA=0.0014;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 104754017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9992;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104754030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104754078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 104754100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9376;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104754164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9991;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104754189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104754201 . CT C 228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7459;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104754243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104754271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5385;AVGPOST=0.9954;RSQ=0.9937;ERATE=0.0008;THETA=0.0004;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 104754329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104754410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9345;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104754442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7885;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104754648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104754662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754692 rs112378939 TTCA T 5608 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0410;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104754759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754797 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104754841 . ATTCTT A 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104754882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9132;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104754918 . TA T 207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5545;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104754976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1758;AVGPOST=0.9926;RSQ=0.9822;ERATE=0.0009;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 104754987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7558;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104755007 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 104755050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104755068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104755095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7008;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104755099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104755251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8893;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104755302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9386;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104755387 . GTAAGTGTTCAGC G 1060 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7215;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104755486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104755509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1248;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104755540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9382;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104755590 . T TA 174 PASS INDEL;BAVGPOST=0.822;BRSQ=0.112;LDAF=0.1567;AVGPOST=0.7772;RSQ=0.3193;ERATE=0.0120;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 104755691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5962;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104755743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.967;LDAF=0.4495;AVGPOST=0.9862;RSQ=0.9820;ERATE=0.0004;THETA=0.0006;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 104755793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.976;LDAF=0.5259;AVGPOST=0.9869;RSQ=0.9831;ERATE=0.0005;THETA=0.0004;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 104755804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4292;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104755891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.922;LDAF=0.9208;AVGPOST=0.9782;RSQ=0.8912;ERATE=0.0006;THETA=0.0005;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 104755916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0004;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104755964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5544;ERATE=0.0007;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104756038 rs72424162 AAG A 1121 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9586;ERATE=0.0003;THETA=0.0045;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104756083 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104756169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0591;AVGPOST=0.9979;RSQ=0.9871;ERATE=0.0003;THETA=0.0029;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 104756183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104756228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5396;AVGPOST=0.9922;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 104756295 . CA C 1092 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104756359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7998;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104756381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0276;AVGPOST=0.9990;RSQ=0.9872;ERATE=0.0003;THETA=0.0016;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104756384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104756481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0090;AVGPOST=0.9977;RSQ=0.9067;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104756635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4009;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104756636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0080;AVGPOST=0.9963;RSQ=0.8331;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104756748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9413;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104756907 . CAT C 314 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6429;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104757046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0340;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 104757063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104757130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104757159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8131;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104757181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104757205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9027;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104757208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9227;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104757312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5314;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104757369 rs34801469 C CT 475 PASS INDEL;BAVGPOST=0.574;BRSQ=0.188;LDAF=0.3427;AVGPOST=0.6724;RSQ=0.3816;ERATE=0.0231;THETA=0.0007;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 104757558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0065;AVGPOST=0.9949;RSQ=0.6575;ERATE=0.0013;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104757671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104757779 . AT A 163 PASS INDEL;BAVGPOST=0.980;BRSQ=0.548;LDAF=0.0455;AVGPOST=0.9480;RSQ=0.5444;ERATE=0.0062;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104757912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104758041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5148;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6744;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104758064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.6997;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104758074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5381;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5201;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104758286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.1774;AVGPOST=0.9917;RSQ=0.9790;ERATE=0.0008;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 104758375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8166;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104758460 . CT C 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6126;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104758691 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5226;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 104758699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104758786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104758816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104758878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104758879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7206;ERATE=0.0008;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104759003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104759089 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5368;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0010;THETA=0.0006;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 104759131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6358;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104759232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104759336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9986;RSQ=0.9754;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104759381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9649;ERATE=0.0005;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104759394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104759436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104759458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104759505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104759680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104759744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104759753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8922;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104759767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.846;LDAF=0.0110;AVGPOST=0.9959;RSQ=0.8538;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104759802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104759855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5235;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 104759873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8475;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104759876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104759877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4403;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104759995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9608;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104760015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0048;AVGPOST=0.9960;RSQ=0.6685;ERATE=0.0021;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104760016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9665;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104760021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4957;AVGPOST=0.9957;RSQ=0.9940;ERATE=0.0005;THETA=0.0021;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 104760210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8711;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104760230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.0278;AVGPOST=0.9990;RSQ=0.9837;ERATE=0.0005;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104760265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1398;AVGPOST=0.9976;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 104760298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104760321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0255;AVGPOST=0.9990;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104760514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.896;LDAF=0.0297;AVGPOST=0.9949;RSQ=0.9365;ERATE=0.0004;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 104760516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8490;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104760547 . A AAG 622 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9149;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104760548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9579;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104760642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9121;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104760693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104760771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104760772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0534;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 104760912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.722;LDAF=0.0188;AVGPOST=0.9891;RSQ=0.7640;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104760935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9461;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104761021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104761219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0129;AVGPOST=0.9994;RSQ=0.9770;ERATE=0.0005;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104761281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104761342 . G GA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7345;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104761387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104761416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0409;AVGPOST=0.9966;RSQ=0.9754;ERATE=0.0003;THETA=0.0012;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104761600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104761777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6896;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104761781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7195;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104761801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104761852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0747;AVGPOST=0.9980;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 104761853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104761863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0404;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104761888 . C CA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104762053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104762138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0387;AVGPOST=0.9992;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104762201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5853;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104762246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7113;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104762299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104762317 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104762348 . TTCA T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104762356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104762366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0011;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104762376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8528;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104762476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9208;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104762630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0004;THETA=0.0008;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 104762678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7665;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104762780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104762840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8381;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104762868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0321;AVGPOST=0.9982;RSQ=0.9798;ERATE=0.0003;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 104762959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4432;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104763201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763310 . TC T 455 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8422;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104763315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104763358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104763506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104763535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104763542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104763579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.879;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8832;ERATE=0.0005;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104763743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.8915;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104763770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5229;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104763779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6691;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104763783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8306;AVGPOST=0.9954;RSQ=0.9874;ERATE=0.0004;THETA=0.0005;AC=1815;AN=2184 GT:DS:GL:BD 0.83104396 1
1 104763829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7871;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104763935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104764022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0218;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0040;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104764033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7658;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104764087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6044;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104764146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9722;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104764179 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6809;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104764265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0985;AVGPOST=0.9958;RSQ=0.9805;ERATE=0.0004;THETA=0.0006;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104764349 . GA G 268 PASS INDEL;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6389;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104764352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104764481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104764500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104764568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104764736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9841;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104764814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.9053;ERATE=0.0004;THETA=0.0036;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104764858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0004;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104764864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8887;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104765003 rs68144212 C CT 75015 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8181;AVGPOST=0.9936;RSQ=0.9832;ERATE=0.0006;THETA=0.0012;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 104765142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2787;AVGPOST=0.9947;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 104765165 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9320;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104765180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104765252 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104765435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104765515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104765529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5809;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104765560 . T TTC 6135 PASS INDEL;BAVGPOST=0.989;BRSQ=0.954;LDAF=0.0922;AVGPOST=0.9865;RSQ=0.9453;ERATE=0.0007;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 104765599 rs61486090 T TC 6635 PASS INDEL;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.0878;AVGPOST=0.9924;RSQ=0.9677;ERATE=0.0006;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 104765600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.904;LDAF=0.0786;AVGPOST=0.9885;RSQ=0.9414;ERATE=0.0008;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 104765601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.832;LDAF=0.0391;AVGPOST=0.9890;RSQ=0.8875;ERATE=0.0017;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 104765632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.928;LDAF=0.7912;AVGPOST=0.9628;RSQ=0.9166;ERATE=0.0041;THETA=0.0003;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 104765663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7697;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104765797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0138;AVGPOST=0.9983;RSQ=0.9462;ERATE=0.0003;THETA=0.0030;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104765800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104765801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104765879 . TA T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4335;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104765938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104766006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5497;ERATE=0.0009;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104766051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104766105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6878;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104766129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3909;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104766238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8443;ERATE=0.0005;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104766333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.805;LDAF=0.0186;AVGPOST=0.9926;RSQ=0.8446;ERATE=0.0006;THETA=0.0052;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104766406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.686;LDAF=0.0098;AVGPOST=0.9942;RSQ=0.7808;ERATE=0.0008;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104766445 . AGG A 912 PASS INDEL;BAVGPOST=0.987;BRSQ=0.479;LDAF=0.0162;AVGPOST=0.9866;RSQ=0.6425;ERATE=0.0008;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104766461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6373;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104766499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4800;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104766593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.845;LDAF=0.0203;AVGPOST=0.9963;RSQ=0.9264;ERATE=0.0007;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104766606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.610;LDAF=0.0775;AVGPOST=0.9365;RSQ=0.6850;ERATE=0.0024;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 104766632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.669;LDAF=0.0078;AVGPOST=0.9943;RSQ=0.7172;ERATE=0.0006;THETA=0.0055;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104766767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.457;LDAF=0.0093;AVGPOST=0.9889;RSQ=0.5298;ERATE=0.0009;THETA=0.0057;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104766887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.252;LDAF=0.0440;AVGPOST=0.9396;RSQ=0.4199;ERATE=0.0035;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104767050 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.936;LDAF=0.1691;AVGPOST=0.9667;RSQ=0.9104;ERATE=0.0014;THETA=0.0011;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 104767169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0072;AVGPOST=0.9881;RSQ=0.3247;ERATE=0.0015;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104767317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.431;LDAF=0.0199;AVGPOST=0.9838;RSQ=0.6517;ERATE=0.0010;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104767351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0052;AVGPOST=0.9959;RSQ=0.6755;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104767410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.655;LDAF=0.0166;AVGPOST=0.9850;RSQ=0.6323;ERATE=0.0012;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104767448 . A AT 2946 PASS INDEL;BAVGPOST=0.950;BRSQ=0.833;LDAF=0.2076;AVGPOST=0.8793;RSQ=0.6958;ERATE=0.0212;THETA=0.0011;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 104767491 . T TA 5354 PASS INDEL;BAVGPOST=0.941;BRSQ=0.621;LDAF=0.0850;AVGPOST=0.9607;RSQ=0.8212;ERATE=0.0007;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 104767494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9307;ERATE=0.0004;THETA=0.0029;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104767592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9249;AVGPOST=0.9928;RSQ=0.9585;ERATE=0.0008;THETA=0.0008;AC=2023;AN=2184 GT:DS:GL:BD 0.92628205 1
1 104767607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104767644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8432;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104767680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9341;ERATE=0.0005;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104767697 . T TTTTG 4553 PASS INDEL;BAVGPOST=0.788;BRSQ=0.356;LDAF=0.2551;AVGPOST=0.7650;RSQ=0.4654;ERATE=0.0458;THETA=0.0042;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 104767734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0030;AVGPOST=0.9958;RSQ=0.4014;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104767743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.485;LDAF=0.0036;AVGPOST=0.9943;RSQ=0.3453;ERATE=0.0007;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104767797 . TCTA T 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4947;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104767935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0043;AVGPOST=0.9954;RSQ=0.5805;ERATE=0.0007;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104767963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.9206;AVGPOST=0.9872;RSQ=0.9330;ERATE=0.0013;THETA=0.0009;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 104768035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1818;AVGPOST=0.9797;RSQ=0.9480;ERATE=0.0007;THETA=0.0008;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 104768044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.720;LDAF=0.8542;AVGPOST=0.8984;RSQ=0.6856;ERATE=0.0232;THETA=0.0017;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 104768132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.895;LDAF=0.0208;AVGPOST=0.9953;RSQ=0.9143;ERATE=0.0007;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104768139 . CA C 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.2704;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104768200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0391;AVGPOST=0.9968;RSQ=0.9681;ERATE=0.0005;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104768219 . TAGTG T 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7139;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104768282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9177;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104768291 rs113085093 GGGGTGGATCCTGGGCTGCA G 3978 PASS INDEL;BAVGPOST=0.983;BRSQ=0.712;LDAF=0.0337;AVGPOST=0.9894;RSQ=0.8823;ERATE=0.0006;THETA=0.0015;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104768628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7465;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104768715 rs57519477 ACT A 122 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.8328;ERATE=0.0005;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104768752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5560;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104768753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6520;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104768963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7324;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104769103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.751;LDAF=0.0104;AVGPOST=0.9947;RSQ=0.7824;ERATE=0.0008;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104769134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.7956;ERATE=0.0006;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104769178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0031;AVGPOST=0.9958;RSQ=0.4590;ERATE=0.0006;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104769317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7628;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104769352 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7454;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104769355 . TG T 7185 PASS INDEL;BAVGPOST=0.981;BRSQ=0.927;LDAF=0.1385;AVGPOST=0.9794;RSQ=0.9353;ERATE=0.0008;THETA=0.0020;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 104769410 . GT G 78 PASS INDEL;BAVGPOST=0.908;BRSQ=0.374;LDAF=0.0733;AVGPOST=0.9368;RSQ=0.6743;ERATE=0.0014;THETA=0.0028;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 104769416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104769724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0203;AVGPOST=0.9991;RSQ=0.9805;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104769732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.734;LDAF=0.0095;AVGPOST=0.9945;RSQ=0.7491;ERATE=0.0009;THETA=0.0032;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104769869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3517;AVGPOST=0.9937;RSQ=0.9897;ERATE=0.0005;THETA=0.0007;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 104769924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4728;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104769980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5513;AVGPOST=0.9925;RSQ=0.9891;ERATE=0.0007;THETA=0.0011;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 104770015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8672;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104770120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.864;LDAF=0.0210;AVGPOST=0.9960;RSQ=0.9176;ERATE=0.0005;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104770122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7714;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104770141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104770156 . C CT 1969 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0215;AVGPOST=0.9986;RSQ=0.9758;ERATE=0.0004;THETA=0.0025;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104770250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.7174;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104770299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104770436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0041;AVGPOST=0.9970;RSQ=0.7160;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104770496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6542;ERATE=0.0010;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104770553 rs58913475 C CA 31563 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2985;AVGPOST=0.9920;RSQ=0.9841;ERATE=0.0009;THETA=0.0008;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 104770728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7551;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104770864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7879;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104770912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8836;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104770996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0231;AVGPOST=0.9968;RSQ=0.9467;ERATE=0.0006;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104771020 rs61703480 AGCCCCCGCAGCAGT A 32530 PASS INDEL;BAVGPOST=0.908;BRSQ=0.848;LDAF=0.6033;AVGPOST=0.8905;RSQ=0.8422;ERATE=0.0097;THETA=0.0013;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 104771056 rs61703480 G GT 7445 PASS INDEL;BAVGPOST=0.742;BRSQ=0.562;LDAF=0.4439;AVGPOST=0.7095;RSQ=0.5456;ERATE=0.0311;THETA=0.0008;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 104771069 . C CA 2633 PASS INDEL;BAVGPOST=0.781;BRSQ=0.593;LDAF=0.4663;AVGPOST=0.7409;RSQ=0.5529;ERATE=0.0256;THETA=0.0005;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 104771072 . C CA 2311 PASS INDEL;BAVGPOST=0.788;BRSQ=0.609;LDAF=0.4505;AVGPOST=0.7812;RSQ=0.6344;ERATE=0.0146;THETA=0.0020;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 104771074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.694;LDAF=0.0099;AVGPOST=0.9919;RSQ=0.7039;ERATE=0.0006;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104771107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.410;LDAF=0.0046;AVGPOST=0.9942;RSQ=0.4469;ERATE=0.0011;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104771116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8042;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104771136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0064;AVGPOST=0.9913;RSQ=0.4757;ERATE=0.0011;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104771169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.2964;AVGPOST=0.9896;RSQ=0.9812;ERATE=0.0005;THETA=0.0010;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 104771203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8369;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104771228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3883;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104771235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.673;LDAF=0.0235;AVGPOST=0.9906;RSQ=0.8529;ERATE=0.0006;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104771345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.611;LDAF=0.2979;AVGPOST=0.8101;RSQ=0.5896;ERATE=0.0560;THETA=0.0008;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 104771348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0186;AVGPOST=0.9983;RSQ=0.9639;ERATE=0.0005;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104771363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0282;AVGPOST=0.9969;RSQ=0.9581;ERATE=0.0005;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104771413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0004;THETA=0.0027;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104771555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5620;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104771569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0235;AVGPOST=0.9985;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104771634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0304;AVGPOST=0.9978;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104771653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0237;AVGPOST=0.9974;RSQ=0.9558;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104771660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0239;AVGPOST=0.9973;RSQ=0.9571;ERATE=0.0005;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104771665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7305;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104771754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0376;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104771772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104771790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104771867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104771876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104772004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104772139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104772302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6803;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104772341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0241;AVGPOST=0.9984;RSQ=0.9748;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104772437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0118;AVGPOST=0.9987;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104772557 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9613;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104772669 rs34106910 GC G 27476 PASS INDEL;BAVGPOST=0.988;BRSQ=0.984;LDAF=0.6106;AVGPOST=0.9821;RSQ=0.9794;ERATE=0.0011;THETA=0.0005;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 104772838 . CA C 6744 PASS INDEL;BAVGPOST=0.947;BRSQ=0.924;LDAF=0.5741;AVGPOST=0.9262;RSQ=0.9149;ERATE=0.0064;THETA=0.0003;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 104772840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.3583;AVGPOST=0.9958;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 104772944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7442;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104772977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.7001;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104772978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7984;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104773069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4835;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104773327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104773408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104773478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0058;AVGPOST=0.9965;RSQ=0.8102;ERATE=0.0004;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104773517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.586;LDAF=0.0096;AVGPOST=0.9871;RSQ=0.4857;ERATE=0.0028;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104773590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6788;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104773601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0235;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104773618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0032;AVGPOST=0.9943;RSQ=0.3314;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104773670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0377;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104773724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1100;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 104773754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104773782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6222;AVGPOST=0.9987;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 104773793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104773800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7258;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104773802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104773855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8526;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104773894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104773904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.672;LDAF=0.0114;AVGPOST=0.9931;RSQ=0.7509;ERATE=0.0008;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104774270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104774288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7656;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104774332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8552;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104774407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104774516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.9137;AVGPOST=0.9936;RSQ=0.9689;ERATE=0.0004;THETA=0.0002;AC=1999;AN=2184 GT:DS:GL:BD 0.91529304 1
1 104774586 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1339;AVGPOST=0.9961;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 104774651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0141;AVGPOST=0.9968;RSQ=0.8969;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104774755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104774756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.5629;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104774878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104774909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6226;AVGPOST=0.9961;RSQ=0.9954;ERATE=0.0006;THETA=0.0005;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 104774954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6177;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104774969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3575;AVGPOST=0.9941;RSQ=0.9917;ERATE=0.0011;THETA=0.0006;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 104774973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9078;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104775012 . TG T 51 PASS INDEL;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.7076;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104775099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8312;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104775122 . G GT 16124 PASS INDEL;BAVGPOST=0.974;BRSQ=0.950;LDAF=0.3049;AVGPOST=0.9534;RSQ=0.9239;ERATE=0.0054;THETA=0.0003;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 104775139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6202;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104775202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1067;AVGPOST=0.9886;RSQ=0.9562;ERATE=0.0012;THETA=0.0003;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 104775287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.7816;AVGPOST=0.9895;RSQ=0.9786;ERATE=0.0006;THETA=0.0007;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 104775574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9323;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104775608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8027;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104775627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0870;AVGPOST=0.9969;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 104775749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0869;AVGPOST=0.9982;RSQ=0.9925;ERATE=0.0004;THETA=0.0006;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 104775787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0004;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104775798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104775950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0298;AVGPOST=0.9987;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104776010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0005;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104776029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0004;THETA=0.0018;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104776044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1106;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 104776137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104776138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0076;AVGPOST=0.9968;RSQ=0.8152;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104776205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3249;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 104776227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6831;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104776252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6769;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104776302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104776433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1420;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 104776435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8273;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104776530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9672;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104776561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8903;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104776625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7375;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104776729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6388;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104776733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0084;AVGPOST=0.9971;RSQ=0.8721;ERATE=0.0012;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104776745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1469;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 104776766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104776832 . GCC G 2751 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0253;AVGPOST=0.9988;RSQ=0.9785;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104776839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104776931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4608;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 104776932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0795;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0004;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 104776983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104777006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104777016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0715;AVGPOST=0.9981;RSQ=0.9893;ERATE=0.0005;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 104777064 . TTA T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5713;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104777067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7697;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104777095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104777267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104777283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104777330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104777331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8989;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104777362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8263;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104777416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1884;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 104777509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7637;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104777519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7800;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104777547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1929;AVGPOST=0.9966;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 104777550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0089;AVGPOST=0.9985;RSQ=0.9334;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104777591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5470;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104777629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9835;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104777631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0804;AVGPOST=0.9977;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 104777686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104777688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8064;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104777711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104777780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0140;AVGPOST=0.9987;RSQ=0.9600;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104777830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7230;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104777853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1467;AVGPOST=0.9971;RSQ=0.9921;ERATE=0.0005;THETA=0.0007;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 104777890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0335;AVGPOST=0.9981;RSQ=0.9791;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104777936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0793;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 104777980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9763;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104778014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0188;AVGPOST=0.9951;RSQ=0.8983;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104778045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0714;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0005;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 104778135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0004;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104778140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7597;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104778178 . AG A 86 PASS INDEL;BAVGPOST=0.969;BRSQ=0.395;LDAF=0.0382;AVGPOST=0.9562;RSQ=0.5538;ERATE=0.0066;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104778251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5271;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104778333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104778359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104778376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4530;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104778390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4184;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104778535 . TGTGC T 49486 PASS INDEL;BAVGPOST=0.968;BRSQ=0.405;LDAF=0.9501;AVGPOST=0.9410;RSQ=0.5082;ERATE=0.0083;THETA=0.0005;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 104778654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0248;AVGPOST=0.9980;RSQ=0.9669;ERATE=0.0004;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104778680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0126;AVGPOST=0.9987;RSQ=0.9528;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104778681 . C CT 5747 PASS INDEL;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0709;AVGPOST=0.9974;RSQ=0.9827;ERATE=0.0006;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 104778731 . G GA 201 PASS INDEL;BAVGPOST=0.987;BRSQ=0.519;LDAF=0.0227;AVGPOST=0.9717;RSQ=0.4845;ERATE=0.0063;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104778752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9191;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104778873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4518;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104779020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8075;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104779032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0108;AVGPOST=0.9946;RSQ=0.8464;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104779281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6571;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104779378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0585;AVGPOST=0.9972;RSQ=0.9817;ERATE=0.0007;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 104779463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0725;AVGPOST=0.9975;RSQ=0.9865;ERATE=0.0007;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104779528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0229;AVGPOST=0.9986;RSQ=0.9745;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104779534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7299;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104779691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9092;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104779834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.897;LDAF=0.0378;AVGPOST=0.9938;RSQ=0.9361;ERATE=0.0010;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 104779853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0038;AVGPOST=0.9941;RSQ=0.3510;ERATE=0.0015;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104779875 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9331;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104779893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4492;AVGPOST=0.9926;RSQ=0.9908;ERATE=0.0008;THETA=0.0011;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 104779903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104779949 . C CT 2990 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9985;RSQ=0.9744;ERATE=0.0003;THETA=0.0015;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104779976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3775;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104780187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5516;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104780277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0369;AVGPOST=0.9937;RSQ=0.9420;ERATE=0.0008;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104780290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0403;AVGPOST=0.9974;RSQ=0.9747;ERATE=0.0007;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104780410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.9950;AVGPOST=0.9944;RSQ=0.5238;ERATE=0.0014;THETA=0.0029;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 104780463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0081;AVGPOST=0.9966;RSQ=0.8279;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104780586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1465;AVGPOST=0.9945;RSQ=0.9828;ERATE=0.0005;THETA=0.0028;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 104780587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7647;ERATE=0.0006;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104780603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3683;ERATE=0.0007;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104780620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0130;AVGPOST=0.9957;RSQ=0.8711;ERATE=0.0007;THETA=0.0032;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104780878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.9069;ERATE=0.0004;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104780922 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0342;AVGPOST=0.9970;RSQ=0.9674;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104780993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1087;AVGPOST=0.9940;RSQ=0.9776;ERATE=0.0006;THETA=0.0004;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104780999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0564;AVGPOST=0.9958;RSQ=0.9703;ERATE=0.0006;THETA=0.0007;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 104781002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6891;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104781011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104781055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0218;AVGPOST=0.9973;RSQ=0.9551;ERATE=0.0003;THETA=0.0061;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104781056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104781198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104781224 . AG A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5632;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0742;AVGPOST=0.9979;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 104781264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8859;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104781313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0533;AVGPOST=0.9967;RSQ=0.9744;ERATE=0.0004;THETA=0.0047;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 104781345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104781354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5936;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104781395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5073;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.4268;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 104781475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104781493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4714;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8119;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104781599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104781677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104781705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104781739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0116;AVGPOST=0.9988;RSQ=0.9642;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104781781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5086;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104781976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104782061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104782136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0424;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0004;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 104782178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104782293 . G GT 781 PASS INDEL;BAVGPOST=0.977;BRSQ=0.875;LDAF=0.1114;AVGPOST=0.9805;RSQ=0.9246;ERATE=0.0014;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 104782451 rs59779028 T TA 10149 PASS INDEL;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1180;AVGPOST=0.9971;RSQ=0.9885;ERATE=0.0004;THETA=0.0009;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 104782453 . A AC 595 PASS INDEL;BAVGPOST=0.970;BRSQ=0.837;LDAF=0.1308;AVGPOST=0.9576;RSQ=0.8502;ERATE=0.0015;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 104782456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782525 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0355;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104782579 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6398;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104782592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1183;AVGPOST=0.9981;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 104782607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9984;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104782668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104782713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5214;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104782739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7664;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104782740 . T TA 1482 PASS INDEL;BAVGPOST=0.862;BRSQ=0.494;LDAF=0.2276;AVGPOST=0.7880;RSQ=0.4941;ERATE=0.0454;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 104782781 . T TA 186 PASS INDEL;BAVGPOST=0.994;BRSQ=0.667;LDAF=0.0229;AVGPOST=0.9771;RSQ=0.6090;ERATE=0.0032;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104782793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.781;LDAF=0.0157;AVGPOST=0.9905;RSQ=0.7771;ERATE=0.0007;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104782797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0202;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104782803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9157;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104782812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4631;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782816 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8397;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104782875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104782892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0204;AVGPOST=0.9986;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104782906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0847;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 104782921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104782956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104783006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104783029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0362;AVGPOST=0.9984;RSQ=0.9842;ERATE=0.0004;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 104783043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104783124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1316;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104783223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0417;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0002;THETA=0.0008;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 104783253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2165;AVGPOST=0.9975;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 104783559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6522;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104783566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7685;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104783594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104783674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1893;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 104783727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104783736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4238;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 104783757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0718;AVGPOST=0.9971;RSQ=0.9828;ERATE=0.0003;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 104783758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2159;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 104783771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104783795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1261;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 104783884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104783922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1294;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 104784074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4231;AVGPOST=0.9988;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 104784092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8310;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104784111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104784140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2157;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0004;THETA=0.0012;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 104784190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0838;AVGPOST=0.9975;RSQ=0.9865;ERATE=0.0005;THETA=0.0008;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 104784201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5177;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104784328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104784344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104784352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0181;AVGPOST=0.9977;RSQ=0.9434;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104784403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4237;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0007;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 104784416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104784481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1431;AVGPOST=0.9959;RSQ=0.9886;ERATE=0.0008;THETA=0.0003;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 104784533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0559;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 104784537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104784580 . A AG 649 PASS INDEL;BAVGPOST=0.990;BRSQ=0.781;LDAF=0.0245;AVGPOST=0.9980;RSQ=0.9629;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104784756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.836;LDAF=0.0122;AVGPOST=0.9946;RSQ=0.8121;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104784811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104784843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7489;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104784909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104784963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.6831;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104785132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0069;AVGPOST=0.9970;RSQ=0.8363;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104785142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0374;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0002;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 104785189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4212;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 104785219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0048;AVGPOST=0.9959;RSQ=0.6746;ERATE=0.0008;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104785317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0120;AVGPOST=0.9987;RSQ=0.9521;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104785318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3486;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 104785386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104785419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104785457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7595;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104785473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0727;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 104785493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0068;AVGPOST=0.9974;RSQ=0.8517;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104785515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104785580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.8231;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104785581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9239;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104785614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0702;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0008;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 104785619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0763;AVGPOST=0.9974;RSQ=0.9856;ERATE=0.0014;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 104785750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104785790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0731;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 104786072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0730;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0002;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 104786080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0595;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 104786163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104786256 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104786269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104786284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7437;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104786355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0112;AVGPOST=0.9983;RSQ=0.9532;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104786366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0243;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104786420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8361;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104786577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104786665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104786675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4204;AVGPOST=0.9958;RSQ=0.9935;ERATE=0.0008;THETA=0.0006;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 104786885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9506;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104786949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5829;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0007;THETA=0.0004;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 104787273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104787483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104787505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0563;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 104787508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0011;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 104787629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8474;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104787654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5848;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 104787704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5882;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0006;THETA=0.0008;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 104787720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104787797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9262;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104787965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0005;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104788063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8188;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104788067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9068;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104788151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5319;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 104788254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6374;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104788288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0987;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 104788327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104788334 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5311;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 104788512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104788584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8855;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104788616 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104788660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104788689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104788693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5309;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0051;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 104788744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8490;ERATE=0.0010;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104788765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104788774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104788830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9571;ERATE=0.0005;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104789142 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0003;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104789167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5306;AVGPOST=0.9923;RSQ=0.9883;ERATE=0.0008;THETA=0.0015;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 104789210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7842;ERATE=0.0004;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104789286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104789365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4026;AVGPOST=0.9898;RSQ=0.9852;ERATE=0.0008;THETA=0.0018;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 104789371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6244;ERATE=0.0003;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104789393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0076;AVGPOST=0.9966;RSQ=0.8283;ERATE=0.0004;THETA=0.0040;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104789442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8989;ERATE=0.0003;THETA=0.0059;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104789543 . C CG 1473 PASS INDEL;BAVGPOST=0.996;BRSQ=0.928;LDAF=0.0218;AVGPOST=0.9950;RSQ=0.9092;ERATE=0.0008;THETA=0.0023;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104789575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104789626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0007;THETA=0.0072;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104789704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0438;AVGPOST=0.9971;RSQ=0.9768;ERATE=0.0004;THETA=0.0047;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 104789723 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9196;ERATE=0.0004;THETA=0.0079;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104789761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0165;AVGPOST=0.9978;RSQ=0.9466;ERATE=0.0004;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104789763 MERGED_DEL_2_1149 A ADELA . . SV;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0005;THETA=0.0065;CIEND=-17;33;CIPOS=-18;19;END=5404651;SOURCE=GenomeStrip_5403433_5404651;SVTYPE=DEL;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104789773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0083;AVGPOST=0.9930;RSQ=0.6614;ERATE=0.0027;THETA=0.0040;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104789792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104789881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.967;LDAF=0.7722;AVGPOST=0.9813;RSQ=0.9647;ERATE=0.0006;THETA=0.0210;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 104789925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104789968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6349;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104790068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0138;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104790069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8669;ERATE=0.0003;THETA=0.0079;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104790076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6866;ERATE=0.0006;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104790079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0114;AVGPOST=0.9903;RSQ=0.6947;ERATE=0.0029;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104790096 . A AG 1063 PASS INDEL;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0144;AVGPOST=0.9947;RSQ=0.8609;ERATE=0.0005;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104790100 . AG A 129 PASS INDEL;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8075;ERATE=0.0009;THETA=0.0121;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104790117 . A AG 1651 PASS INDEL;BAVGPOST=0.994;BRSQ=0.904;LDAF=0.0252;AVGPOST=0.9914;RSQ=0.8557;ERATE=0.0043;THETA=0.0122;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104790135 . TGG T 9590 PASS INDEL;BAVGPOST=0.978;BRSQ=0.895;LDAF=0.1033;AVGPOST=0.9766;RSQ=0.9141;ERATE=0.0005;THETA=0.0036;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 104790166 rs71564536 T TC 7137 PASS INDEL;BAVGPOST=0.978;BRSQ=0.895;LDAF=0.1030;AVGPOST=0.9763;RSQ=0.9129;ERATE=0.0005;THETA=0.0216;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 104790169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0108;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104790444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0003;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104790466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104790623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0123;AVGPOST=0.9969;RSQ=0.9079;ERATE=0.0003;THETA=0.0104;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104790680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104790712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104790713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0006;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104790845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104791040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0086;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104791072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0623;AVGPOST=0.9981;RSQ=0.9868;ERATE=0.0004;THETA=0.0039;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 104791193 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104791225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0095;AVGPOST=0.9981;RSQ=0.9100;ERATE=0.0003;THETA=0.0050;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104791237 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0167;AVGPOST=0.9983;RSQ=0.9654;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104791318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0009;THETA=0.0093;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104791407 . T TC 18802 PASS INDEL;BAVGPOST=0.939;BRSQ=0.874;LDAF=0.7170;AVGPOST=0.8787;RSQ=0.7852;ERATE=0.0252;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 104791450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0157;AVGPOST=0.9968;RSQ=0.9143;ERATE=0.0005;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104791518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3792;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104791535 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1010;AVGPOST=0.9988;RSQ=0.9945;ERATE=0.0004;THETA=0.0009;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104791654 MERGED_DEL_2_1252 TGTCGTGCTCCAGCCTCCAGAGTAGCTGGAATTACAGGCCCCCACCACCACACTCAGCTAATTTTTTTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCGCGATCTCAGGTGATCTGTCCGCCTTGGCCTCCCAAAGTCCTGGGATTACAGGCATGAGCCACTGCACCC TAT . . SV;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0155;AVGPOST=0.9964;RSQ=0.8951;ERATE=0.0008;THETA=0.0012;CIEND=-106;47;CIPOS=-90;67;END=6459610;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_6458634_6459571;EMBLdel GT:DS:GL:BD 0.01419414 0
1 104791792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6005;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104791837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4001;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104791917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104791965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3437;AVGPOST=0.9970;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 104791975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9378;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104792046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104792113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104792158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9468;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104792164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104792174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3444;AVGPOST=0.9987;RSQ=0.9982;ERATE=0.0004;THETA=0.0014;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 104792297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104792308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1822;AVGPOST=0.9970;RSQ=0.9928;ERATE=0.0003;THETA=0.0021;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 104792318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104792403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104792596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104792609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104792659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.941;LDAF=0.3323;AVGPOST=0.9820;RSQ=0.9759;ERATE=0.0027;THETA=0.0011;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 104792966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5320;ERATE=0.0005;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104793011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1478;AVGPOST=0.9960;RSQ=0.9893;ERATE=0.0006;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 104793155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0511;AVGPOST=0.9971;RSQ=0.9805;ERATE=0.0004;THETA=0.0028;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 104793220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4082;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104793247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6055;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104793266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.654;LDAF=0.0068;AVGPOST=0.9967;RSQ=0.8122;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104793325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8665;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104793329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4424;ERATE=0.0007;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104793402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.467;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.4777;ERATE=0.0007;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104793445 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9670;ERATE=0.0003;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104793495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8179;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104793568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0125;AVGPOST=0.9977;RSQ=0.9286;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104793603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1327;AVGPOST=0.9967;RSQ=0.9883;ERATE=0.0006;THETA=0.0018;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104793711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9120;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104793787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.3227;AVGPOST=0.9888;RSQ=0.9838;ERATE=0.0016;THETA=0.0008;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 104793889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9053;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104794136 . C CA 2296 PASS INDEL;BAVGPOST=0.789;BRSQ=0.479;LDAF=0.2968;AVGPOST=0.7384;RSQ=0.4675;ERATE=0.0604;THETA=0.0011;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 104794220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0390;AVGPOST=0.9980;RSQ=0.9797;ERATE=0.0004;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104794245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7220;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104794291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1983;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 104794312 . AAAC A 484 PASS INDEL;BAVGPOST=0.976;BRSQ=0.474;LDAF=0.0354;AVGPOST=0.9670;RSQ=0.6357;ERATE=0.0038;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 104794358 rs111305102 A AAC 1607 PASS INDEL;BAVGPOST=0.902;BRSQ=0.603;LDAF=0.1681;AVGPOST=0.8662;RSQ=0.6287;ERATE=0.0239;THETA=0.0019;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 104794371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7800;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104794526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7597;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104794550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104794568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7164;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104794674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1969;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 104794686 . TTC T 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104794723 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0985;AVGPOST=0.9954;RSQ=0.9800;ERATE=0.0004;THETA=0.0008;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 104794851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2171;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0005;THETA=0.0010;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 104794877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.596;LDAF=0.0052;AVGPOST=0.9950;RSQ=0.6032;ERATE=0.0008;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104794891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0961;AVGPOST=0.9990;RSQ=0.9949;ERATE=0.0005;THETA=0.0010;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 104794892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1010;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0005;THETA=0.0005;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104794896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2170;AVGPOST=0.9963;RSQ=0.9933;ERATE=0.0004;THETA=0.0010;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 104794965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104794982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7487;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104795012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9213;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104795086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6356;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104795106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7472;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104795146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104795180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5251;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104795268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2169;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 104795381 . CGA C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4591;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104795469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0008;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 104795473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.3246;AVGPOST=0.9903;RSQ=0.9863;ERATE=0.0010;THETA=0.0006;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 104795524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0145;AVGPOST=0.9977;RSQ=0.9292;ERATE=0.0006;THETA=0.0016;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104795525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.881;BRSQ=0.623;LDAF=0.1441;AVGPOST=0.9100;RSQ=0.7486;ERATE=0.0069;THETA=0.0007;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 104795578 rs75611267 CAAA C 340 PASS INDEL;BAVGPOST=0.869;BRSQ=0.429;LDAF=0.1271;AVGPOST=0.8906;RSQ=0.6452;ERATE=0.0061;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 104795593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.466;LDAF=0.0093;AVGPOST=0.9927;RSQ=0.6838;ERATE=0.0009;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104795643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.658;LDAF=0.0110;AVGPOST=0.9920;RSQ=0.6812;ERATE=0.0010;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104795703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.447;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5172;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104795745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.538;LDAF=0.0170;AVGPOST=0.9803;RSQ=0.5623;ERATE=0.0033;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104795746 . G GA 73 PASS INDEL;BAVGPOST=0.978;BRSQ=0.332;LDAF=0.0200;AVGPOST=0.9767;RSQ=0.5677;ERATE=0.0017;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104795758 . AAAG A 3128 PASS INDEL;BAVGPOST=0.947;BRSQ=0.852;LDAF=0.1679;AVGPOST=0.9568;RSQ=0.9108;ERATE=0.0014;THETA=0.0006;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 104795764 . AAG A 7598 PASS INDEL;BAVGPOST=0.966;BRSQ=0.911;LDAF=0.1980;AVGPOST=0.9758;RSQ=0.9558;ERATE=0.0007;THETA=0.0016;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 104795765 . AG A 7607 PASS INDEL;BAVGPOST=0.968;BRSQ=0.917;LDAF=0.1983;AVGPOST=0.9754;RSQ=0.9540;ERATE=0.0008;THETA=0.0009;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 104795766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2173;AVGPOST=0.9963;RSQ=0.9931;ERATE=0.0006;THETA=0.0041;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 104795819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5242;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104795889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.732;LDAF=0.0093;AVGPOST=0.9941;RSQ=0.7246;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104795902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4920;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104796024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104796114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2168;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 104796256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6652;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104796313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0961;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0009;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 104796342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.686;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8454;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104796591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1164;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 104796633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0617;AVGPOST=0.9946;RSQ=0.9614;ERATE=0.0005;THETA=0.0012;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 104796695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.0824;AVGPOST=0.9906;RSQ=0.9528;ERATE=0.0005;THETA=0.0033;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 104796792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.2255;AVGPOST=0.9814;RSQ=0.9590;ERATE=0.0025;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 104796810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4430;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104796944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104797004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0621;AVGPOST=0.9986;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 104797014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0216;AVGPOST=0.9924;RSQ=0.8525;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104797101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104797113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0428;AVGPOST=0.9993;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104797199 . CCAAGCCA C 1184 PASS INDEL;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0110;AVGPOST=0.9941;RSQ=0.8003;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104797248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0195;AVGPOST=0.9930;RSQ=0.8473;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104797262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1072;AVGPOST=0.9956;RSQ=0.9824;ERATE=0.0005;THETA=0.0007;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 104797311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2131;AVGPOST=0.9912;RSQ=0.9801;ERATE=0.0005;THETA=0.0004;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 104797327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9421;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104797344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7576;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104797358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0440;AVGPOST=0.9983;RSQ=0.9850;ERATE=0.0004;THETA=0.0074;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 104797384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0644;AVGPOST=0.9961;RSQ=0.9740;ERATE=0.0005;THETA=0.0074;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 104797412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8735;ERATE=0.0004;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104797616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104797690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.7473;AVGPOST=0.9805;RSQ=0.9627;ERATE=0.0077;THETA=0.0047;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 104797950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104798061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9254;ERATE=0.0003;THETA=0.0047;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104798065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104798195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0703;AVGPOST=0.9984;RSQ=0.9900;ERATE=0.0003;THETA=0.0069;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 104798264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8779;ERATE=0.0004;THETA=0.0074;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104798339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104798393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0105;AVGPOST=0.9961;RSQ=0.8426;ERATE=0.0004;THETA=0.0090;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104798446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8537;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104798662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4465;AVGPOST=0.9934;RSQ=0.9897;ERATE=0.0005;THETA=0.0016;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 104798815 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104798821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5242;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104798907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3053;AVGPOST=0.9922;RSQ=0.9850;ERATE=0.0010;THETA=0.0015;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 104798933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6188;AVGPOST=0.9928;RSQ=0.9876;ERATE=0.0011;THETA=0.0004;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 104798944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3023;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0006;THETA=0.0029;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 104798969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8166;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104799103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104799191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5071;AVGPOST=0.9951;RSQ=0.9914;ERATE=0.0010;THETA=0.0002;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104799287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7481;AVGPOST=0.9950;RSQ=0.9897;ERATE=0.0008;THETA=0.0002;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 104799315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.660;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8628;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104799321 rs79831740 GC G 16879 PASS INDEL;BAVGPOST=0.982;BRSQ=0.973;LDAF=0.5137;AVGPOST=0.9255;RSQ=0.8802;ERATE=0.0135;THETA=0.0009;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 104799339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1077;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 104799369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.621;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6069;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104799375 . A AT 51 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5390;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104799436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104799569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4919;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0008;THETA=0.0003;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 104799613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1792;AVGPOST=0.9831;RSQ=0.9561;ERATE=0.0021;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 104799666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1972;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0004;THETA=0.0002;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 104799820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1968;AVGPOST=0.9960;RSQ=0.9903;ERATE=0.0008;THETA=0.0005;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 104799829 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5748;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104799902 . CCAT C 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104799905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104799929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9571;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104799955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6087;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104800115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1882;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 104800165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4176;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 104800271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6372;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104800279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.7994;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104800361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800387 . G GT 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4203;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1234;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 104800451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104800497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8978;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104800550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9066;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104800669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4214;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0026;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 104800828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5371;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104800878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4427;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104800972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4236;AVGPOST=0.9953;RSQ=0.9930;ERATE=0.0008;THETA=0.0009;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 104801022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104801386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5567;ERATE=0.0012;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104801504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9082;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104801506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104801548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104801559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.8226;AVGPOST=0.9893;RSQ=0.9731;ERATE=0.0007;THETA=0.0014;AC=1802;AN=2184 GT:DS:GL:BD 0.82509160 1
1 104801600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104801639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0703;AVGPOST=0.9978;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 104801681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104801689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8833;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104801969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5987;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104802067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8510;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104802088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104802114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104802264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104802303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9766;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104802350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6418;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 104802423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104802519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104802619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1623;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 104802683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104802986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104803198 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104803202 . G GT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104803202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104803258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9236;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104803440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104803442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8270;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104803450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9759;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104803594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9378;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104803673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104803778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104803876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104803965 . G GA 1506 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104804170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104804186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104804755 . C CCCAA 1273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8904;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104804797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1530;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0014;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 104804799 . G GC 633 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8660;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104804910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.8922;AVGPOST=0.9951;RSQ=0.9789;ERATE=0.0008;THETA=0.0004;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 104804947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8533;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104804978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0190;AVGPOST=0.9989;RSQ=0.9775;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104805042 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104805043 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104805478 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8502;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104805639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104805647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104805681 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9092;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104805728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7118;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104805757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104805836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104805859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104805952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0210;AVGPOST=0.9975;RSQ=0.9569;ERATE=0.0005;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104806115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104806124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104806236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104806437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3431;AVGPOST=0.9921;RSQ=0.9892;ERATE=0.0005;THETA=0.0005;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 104806458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1644;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 104806513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104806595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104806662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.6251;AVGPOST=0.9589;RSQ=0.9380;ERATE=0.0064;THETA=0.0007;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 104806725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0040;AVGPOST=0.9965;RSQ=0.6345;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104806915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104806946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0198;AVGPOST=0.9963;RSQ=0.9277;ERATE=0.0005;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104807088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0092;AVGPOST=0.9962;RSQ=0.8444;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104807134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0065;AVGPOST=0.9941;RSQ=0.6998;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104807479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0106;AVGPOST=0.9983;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104807480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0259;AVGPOST=0.9969;RSQ=0.9576;ERATE=0.0006;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 104807544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5693;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104807567 . G GA 137 PASS INDEL;BAVGPOST=0.984;BRSQ=0.538;LDAF=0.0431;AVGPOST=0.9441;RSQ=0.4685;ERATE=0.0141;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104807619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7263;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104807620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104807641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104807776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6226;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104807785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104807795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104807845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104807871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8047;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104808026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104808224 . CAGATA C 507 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104808300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8711;ERATE=0.0011;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104808415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104808594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7285;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104808600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104808675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104808679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3500;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0004;THETA=0.0042;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 104809173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104809181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104809252 . CAGG C 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104809389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8057;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104809437 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104809488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0251;AVGPOST=0.9977;RSQ=0.9601;ERATE=0.0005;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104809499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0867;AVGPOST=0.9951;RSQ=0.9784;ERATE=0.0005;THETA=0.0006;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 104809537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104809569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104809603 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104809670 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104809772 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104809824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7965;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104809842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9544;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104809888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3026;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0005;THETA=0.0007;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 104809907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4492;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104810052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5431;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104810281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4688;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104810285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6235;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104810307 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104810931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9977;RSQ=0.9609;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104811053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104811094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6737;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104811107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6357;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104811155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6593;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104811224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8408;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104811230 . CAGA C 2071 PASS INDEL;BAVGPOST=0.994;BRSQ=0.891;LDAF=0.0265;AVGPOST=0.9920;RSQ=0.8789;ERATE=0.0006;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104811511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104811547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5181;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104811552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9991;RSQ=0.9558;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104811588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104811675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104811715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104811899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104811920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104812016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104812039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.8417;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104812057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0629;AVGPOST=0.9951;RSQ=0.9699;ERATE=0.0005;THETA=0.0006;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 104812090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7746;ERATE=0.0004;THETA=0.0067;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104812305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4008;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104812539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8525;ERATE=0.0004;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104812649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4206;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104812786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.5896;ERATE=0.0022;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104812791 . GC G 367 PASS INDEL;BAVGPOST=0.995;BRSQ=0.580;LDAF=0.0080;AVGPOST=0.9934;RSQ=0.6672;ERATE=0.0008;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104812843 . CGTCCCTG C 105 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0074;AVGPOST=0.9892;RSQ=0.4178;ERATE=0.0016;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104812869 rs79897123 CCCTGGTG C 314 PASS INDEL;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0066;AVGPOST=0.9932;RSQ=0.5822;ERATE=0.0012;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104812879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0190;AVGPOST=0.9983;RSQ=0.9625;ERATE=0.0006;THETA=0.0018;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104813124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5639;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104813126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8200;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104813201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9104;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104813362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7130;ERATE=0.0005;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104813393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9498;ERATE=0.0004;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104813580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6287;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104813598 . G GAT 1348 PASS INDEL;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0132;AVGPOST=0.9950;RSQ=0.8482;ERATE=0.0013;THETA=0.0057;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104813830 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104813842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4845;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104814125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104814191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104814230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104814257 . ATCT A 111 PASS INDEL;BAVGPOST=0.998;BRSQ=0.498;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4676;ERATE=0.0005;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104814344 . C CT 1354 PASS INDEL;BAVGPOST=0.944;BRSQ=0.623;LDAF=0.1076;AVGPOST=0.8901;RSQ=0.5293;ERATE=0.0165;THETA=0.0061;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 104814360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.557;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5113;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104814391 . T TG 307 PASS INDEL;BAVGPOST=0.993;BRSQ=0.656;LDAF=0.0120;AVGPOST=0.9878;RSQ=0.6069;ERATE=0.0019;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104814416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4505;ERATE=0.0005;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104814499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.887;LDAF=0.0518;AVGPOST=0.9849;RSQ=0.8864;ERATE=0.0015;THETA=0.0097;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 104814575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0274;AVGPOST=0.9960;RSQ=0.9445;ERATE=0.0003;THETA=0.0097;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104814646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.574;LDAF=0.0061;AVGPOST=0.9920;RSQ=0.5142;ERATE=0.0012;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104814743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3588;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104814862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7690;ERATE=0.0004;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104814954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.771;LDAF=0.0080;AVGPOST=0.9968;RSQ=0.8412;ERATE=0.0007;THETA=0.0036;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104815025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104815047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104815155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5607;ERATE=0.0005;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104815179 . CTTCCTTTTTG C 351 PASS INDEL;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6879;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104815351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104815374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104815383 . CT C 288 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104815405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104815407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.460;LDAF=0.0081;AVGPOST=0.9908;RSQ=0.5101;ERATE=0.0008;THETA=0.0088;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104815617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0147;AVGPOST=0.9887;RSQ=0.7028;ERATE=0.0007;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104815669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.713;LDAF=0.0334;AVGPOST=0.9564;RSQ=0.5016;ERATE=0.0014;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104815781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.516;LDAF=0.0266;AVGPOST=0.9665;RSQ=0.4984;ERATE=0.0020;THETA=0.0022;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104815879 . C CA 29 PASS INDEL;BAVGPOST=0.675;BRSQ=0.016;LDAF=0.2159;AVGPOST=0.6865;RSQ=0.2225;ERATE=0.0207;THETA=0.0054;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 104815997 . A AGGCCGC 199 PASS INDEL;BAVGPOST=0.932;BRSQ=0.033;LDAF=0.1000;AVGPOST=0.8693;RSQ=0.4238;ERATE=0.0054;THETA=0.0044;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 104816151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.207;LDAF=0.0919;AVGPOST=0.8996;RSQ=0.5477;ERATE=0.0027;THETA=0.0008;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 104816249 . CTCGTCG C 205 PASS INDEL;BAVGPOST=0.958;BRSQ=0.106;LDAF=0.0443;AVGPOST=0.9544;RSQ=0.5795;ERATE=0.0014;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 104816323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0145;AVGPOST=0.9888;RSQ=0.6801;ERATE=0.0012;THETA=0.0033;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104816584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104816923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6836;ERATE=0.0006;THETA=0.0254;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104817093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.1610;ERATE=0.0004;THETA=0.0181;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104817212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104817233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8894;ERATE=0.0003;THETA=0.0165;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104817338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.944;LDAF=0.8639;AVGPOST=0.9770;RSQ=0.9313;ERATE=0.0007;THETA=0.0151;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 104817371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9822;ERATE=0.0003;THETA=0.0125;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104817504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0160;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104817505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.2866;AVGPOST=0.9858;RSQ=0.9742;ERATE=0.0012;THETA=0.0043;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 104817515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104817538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0078;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104817587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104817705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.7123;AVGPOST=0.9853;RSQ=0.9718;ERATE=0.0028;THETA=0.0025;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 104817725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8656;ERATE=0.0015;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104817860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0116;AVGPOST=0.9981;RSQ=0.9329;ERATE=0.0006;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104817881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8413;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104817915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5733;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104817954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4709;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104817986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8109;ERATE=0.0004;THETA=0.0073;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104817989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0728;AVGPOST=0.9979;RSQ=0.9889;ERATE=0.0003;THETA=0.0010;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104818048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1001;AVGPOST=0.9969;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104818144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818407 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4275;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7722;ERATE=0.0006;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104818452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.0933;AVGPOST=0.9966;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 104818477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0113;AVGPOST=0.9987;RSQ=0.9512;ERATE=0.0003;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104818569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0725;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0003;THETA=0.0017;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104818575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8616;ERATE=0.0005;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104818578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.5335;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104818920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8441;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104818951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6574;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104819087 . C CA 4841 PASS INDEL;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0741;AVGPOST=0.9968;RSQ=0.9813;ERATE=0.0007;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 104819180 . AT A 11193 PASS INDEL;BAVGPOST=0.849;BRSQ=0.691;LDAF=0.3509;AVGPOST=0.8324;RSQ=0.7003;ERATE=0.0293;THETA=0.0008;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 104819228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104819317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2543;AVGPOST=0.9956;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 104819482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.6686;AVGPOST=0.9938;RSQ=0.9897;ERATE=0.0005;THETA=0.0005;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 104819604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104819666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0061;AVGPOST=0.9964;RSQ=0.7522;ERATE=0.0011;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104819715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6902;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104819746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8845;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104819929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0062;AVGPOST=0.9972;RSQ=0.8144;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104820054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104820086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4342;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104820093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4869;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104820250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8554;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104820251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104820286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.958;LDAF=0.3848;AVGPOST=0.9775;RSQ=0.9655;ERATE=0.0031;THETA=0.0005;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 104820324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0067;AVGPOST=0.9934;RSQ=0.5650;ERATE=0.0019;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104820360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7042;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104820448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0727;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104820731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9084;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104820757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104820763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8312;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104820790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104820964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7632;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104821022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0980;AVGPOST=0.9981;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104821052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104821418 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104821422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9609;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104821485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104821554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9552;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104821560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1997;AVGPOST=0.9965;RSQ=0.9903;ERATE=0.0006;THETA=0.0004;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 104821664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7961;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104821753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104821826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0053;AVGPOST=0.9969;RSQ=0.7618;ERATE=0.0031;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104821889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104821938 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8443;AVGPOST=0.9963;RSQ=0.9892;ERATE=0.0005;THETA=0.0013;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 104822076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104822084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5387;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104822217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9281;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104822220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7979;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104822255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5715;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104822257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8798;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104822322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8165;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104822424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9132;ERATE=0.0004;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104822435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0559;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 104822501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104822506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0555;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 104822615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.938;LDAF=0.8151;AVGPOST=0.9637;RSQ=0.9069;ERATE=0.0066;THETA=0.0007;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 104822674 rs34274170 TC T 7522 PASS INDEL;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0560;AVGPOST=0.9943;RSQ=0.9637;ERATE=0.0009;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104822724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.942;LDAF=0.0506;AVGPOST=0.9951;RSQ=0.9673;ERATE=0.0005;THETA=0.0018;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104822774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9420;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104822796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0177;AVGPOST=0.9990;RSQ=0.9741;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104822827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4609;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104822906 . CTG C 1549 PASS INDEL;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0339;AVGPOST=0.9954;RSQ=0.9512;ERATE=0.0006;THETA=0.0010;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104822911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0653;AVGPOST=0.9978;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 104823212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6835;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104823318 . AACAC A 320 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4770;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104823445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7584;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104823477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823498 . AG A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823507 . GGAGAT G 541 PASS INDEL;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8376;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104823522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0645;AVGPOST=0.9984;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 104823687 . T TG 443 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8619;ERATE=0.0005;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104823713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104823731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0557;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0005;THETA=0.0009;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 104823769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0548;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104823894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0551;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104823935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104823936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5527;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104823991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0010;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104824005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0010;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104824132 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5816;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104824207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0554;AVGPOST=0.9988;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104824264 . C CT 116 PASS INDEL;BAVGPOST=0.996;BRSQ=0.569;LDAF=0.0140;AVGPOST=0.9800;RSQ=0.4243;ERATE=0.0046;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104824264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5890;ERATE=0.0007;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104824298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7124;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104824300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6155;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104824392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0066;AVGPOST=0.9959;RSQ=0.7762;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104824425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1539;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0004;THETA=0.0010;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 104824461 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104824647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8346;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 104824669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0354;AVGPOST=0.9988;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 104824681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9077;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104824818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0063;AVGPOST=0.9940;RSQ=0.6374;ERATE=0.0019;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104824829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8452;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104824997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104824999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6329;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.9122;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104825065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825316 . GA G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6448;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104825329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9300;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104825332 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8377;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104825425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104825562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104825567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4549;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104825933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104825951 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826031 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9999;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104826059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104826063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104826081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104826085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104826240 . CG C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0047;AVGPOST=0.9915;RSQ=0.2823;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826264 . A AC 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5465;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826433 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104826525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9030;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104826587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104826633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8341;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0004;THETA=0.0007;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 104826711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104826715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7365;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0005;THETA=0.0027;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 104826729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8327;AVGPOST=0.9963;RSQ=0.9884;ERATE=0.0008;THETA=0.0007;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 104826779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8334;AVGPOST=0.9980;RSQ=0.9943;ERATE=0.0005;THETA=0.0009;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 104826784 . T TG 539 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104826800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8883;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104826828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5664;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104826834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0229;AVGPOST=0.9930;RSQ=0.8738;ERATE=0.0006;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104826879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6153;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104827149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6673;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0010;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 104827190 . TG T 1631 PASS INDEL;BAVGPOST=0.995;BRSQ=0.892;LDAF=0.0156;AVGPOST=0.9957;RSQ=0.8817;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104827271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.2922;ERATE=0.0008;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104827522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9189;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104827558 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.851;BRSQ=0.677;LDAF=0.2596;AVGPOST=0.8563;RSQ=0.7418;ERATE=0.0121;THETA=0.0009;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 104827671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.730;LDAF=0.0324;AVGPOST=0.9866;RSQ=0.8757;ERATE=0.0008;THETA=0.0021;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104827682 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8039;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104827754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8031;ERATE=0.0005;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104827755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0118;AVGPOST=0.9979;RSQ=0.9353;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104827759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0034;AVGPOST=0.9967;RSQ=0.5932;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104827804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9434;ERATE=0.0004;THETA=0.0018;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104827874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9303;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104827894 . AT A 38 PASS INDEL;BAVGPOST=0.992;BRSQ=0.470;LDAF=0.0097;AVGPOST=0.9871;RSQ=0.4306;ERATE=0.0029;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104827926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.864;BRSQ=0.559;LDAF=0.1567;AVGPOST=0.8716;RSQ=0.6692;ERATE=0.0150;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 104827929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.423;LDAF=0.0709;AVGPOST=0.9249;RSQ=0.5837;ERATE=0.0067;THETA=0.0012;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 104827934 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0072;AVGPOST=0.9916;RSQ=0.5425;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104827956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5752;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104828215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.411;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5263;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104828238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104828366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5870;AVGPOST=0.9883;RSQ=0.9822;ERATE=0.0005;THETA=0.0007;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 104828405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828428 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828477 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104828529 . TAGA T 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5205;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3678;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 104828572 . TGA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3685;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0005;THETA=0.0008;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 104828652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9032;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104828674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104828718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104828776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3680;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0007;THETA=0.0006;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 104828786 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8648;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104828790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8764;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104828791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.463;LDAF=0.0056;AVGPOST=0.9947;RSQ=0.6673;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104828853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104829058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104829084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104829217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104829218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3677;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 104829263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104829288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7461;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104829292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7081;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104829304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3676;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 104829305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0380;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104829333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104829351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104829380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3672;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0004;THETA=0.0008;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 104829383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9570;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104829407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3457;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 104829425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4092;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0027;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 104829504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104829649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3572;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0003;THETA=0.0015;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 104829655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3578;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0003;THETA=0.0054;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 104829657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9142;ERATE=0.0003;THETA=0.0074;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104829695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.3475;AVGPOST=0.9859;RSQ=0.9770;ERATE=0.0032;THETA=0.0033;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 104829815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104829820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9691;ERATE=0.0004;THETA=0.0034;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104829914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104829921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0138;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104830064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7805;ERATE=0.0004;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104830134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6838;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104830135 . GC G 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0052;AVGPOST=0.9963;RSQ=0.7115;ERATE=0.0009;THETA=0.0094;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104830142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.2362;AVGPOST=0.9829;RSQ=0.9705;ERATE=0.0005;THETA=0.0062;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 104830216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.960;LDAF=0.3771;AVGPOST=0.9768;RSQ=0.9640;ERATE=0.0017;THETA=0.0064;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 104830239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0099;AVGPOST=0.9978;RSQ=0.9217;ERATE=0.0006;THETA=0.0069;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104830246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0141;AVGPOST=0.9960;RSQ=0.8996;ERATE=0.0005;THETA=0.0217;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104830319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8837;ERATE=0.0004;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104830320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0118;AVGPOST=0.9965;RSQ=0.8873;ERATE=0.0005;THETA=0.0094;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104830336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104830344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8799;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104830527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8634;ERATE=0.0003;THETA=0.0089;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104830590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0003;THETA=0.0089;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104830693 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0149;AVGPOST=0.9971;RSQ=0.9209;ERATE=0.0004;THETA=0.0151;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104830714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.7235;AVGPOST=0.9856;RSQ=0.9776;ERATE=0.0007;THETA=0.0012;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 104830747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104830840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104830848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8265;ERATE=0.0004;THETA=0.0214;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104830889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.4336;AVGPOST=0.9936;RSQ=0.9919;ERATE=0.0006;THETA=0.0038;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 104830916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104830946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104830956 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4339;AVGPOST=0.9960;RSQ=0.9945;ERATE=0.0004;THETA=0.0047;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 104830973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104831065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4307;AVGPOST=0.9915;RSQ=0.9886;ERATE=0.0010;THETA=0.0010;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 104831101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104831284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0841;AVGPOST=0.9907;RSQ=0.9645;ERATE=0.0005;THETA=0.0068;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 104831299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8594;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104831305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6982;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104831352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104831412 . C CCT 18989 PASS INDEL;BAVGPOST=0.988;BRSQ=0.943;LDAF=0.0970;AVGPOST=0.9896;RSQ=0.9603;ERATE=0.0004;THETA=0.0013;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 104831436 . T TC 3021 PASS INDEL;BAVGPOST=0.987;BRSQ=0.938;LDAF=0.0971;AVGPOST=0.9896;RSQ=0.9605;ERATE=0.0003;THETA=0.0086;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104831438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0497;AVGPOST=0.9970;RSQ=0.9789;ERATE=0.0003;THETA=0.0109;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104831453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0111;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104831510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8093;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104831547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104831587 . AGGAAAATGT A 9402 PASS INDEL;BAVGPOST=0.987;BRSQ=0.941;LDAF=0.1008;AVGPOST=0.9894;RSQ=0.9522;ERATE=0.0009;THETA=0.0017;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 104831612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0652;AVGPOST=0.9934;RSQ=0.9643;ERATE=0.0004;THETA=0.0010;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 104831656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7765;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104831679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.1893;AVGPOST=0.9902;RSQ=0.9762;ERATE=0.0005;THETA=0.0047;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 104831718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0614;AVGPOST=0.9944;RSQ=0.9680;ERATE=0.0004;THETA=0.0007;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 104831734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.0898;AVGPOST=0.9916;RSQ=0.9662;ERATE=0.0005;THETA=0.0012;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 104831744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0625;AVGPOST=0.9951;RSQ=0.9721;ERATE=0.0004;THETA=0.0057;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 104831757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104831902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9663;ERATE=0.0003;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104831913 . C CA 7941 PASS INDEL;BAVGPOST=0.994;BRSQ=0.954;LDAF=0.0609;AVGPOST=0.9970;RSQ=0.9807;ERATE=0.0004;THETA=0.0054;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 104831948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104832030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0650;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 104832036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0455;AVGPOST=0.9980;RSQ=0.9820;ERATE=0.0005;THETA=0.0041;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 104832122 . GA G 4981 PASS INDEL;BAVGPOST=0.989;BRSQ=0.915;LDAF=0.0543;AVGPOST=0.9907;RSQ=0.9387;ERATE=0.0004;THETA=0.0025;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 104832142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6220;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104832239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0628;AVGPOST=0.9984;RSQ=0.9890;ERATE=0.0004;THETA=0.0034;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 104832242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104832454 rs34269715 T TA 32516 PASS INDEL;BAVGPOST=0.840;BRSQ=0.756;LDAF=0.5601;AVGPOST=0.8292;RSQ=0.7643;ERATE=0.0298;THETA=0.0010;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 104832483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9179;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104832494 . T TG 155 PASS INDEL;BAVGPOST=0.957;BRSQ=0.320;LDAF=0.0775;AVGPOST=0.8865;RSQ=0.3587;ERATE=0.0156;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104832499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0128;AVGPOST=0.9983;RSQ=0.9402;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104832518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.715;LDAF=0.0264;AVGPOST=0.9852;RSQ=0.7703;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104832522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.690;LDAF=0.0359;AVGPOST=0.9846;RSQ=0.8228;ERATE=0.0006;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104832597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.897;LDAF=0.9636;AVGPOST=0.9903;RSQ=0.8859;ERATE=0.0013;THETA=0.0004;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 104832926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0070;AVGPOST=0.9957;RSQ=0.7700;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104832942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8893;ERATE=0.0004;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104833001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9975;RSQ=0.8303;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104833010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5349;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104833013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5824;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104833242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.626;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7827;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104833325 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0057;AVGPOST=0.9941;RSQ=0.5420;ERATE=0.0009;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104833340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9476;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=2070;AN=2184 GT:DS:GL:BD 0.94780219 1
1 104833359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1042;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0004;THETA=0.0011;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104833464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7644;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 104833476 . TA T 805 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8589;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104833490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0068;AVGPOST=0.9947;RSQ=0.7069;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104833494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7562;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 104833586 . C CG 34 PASS INDEL;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6065;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104833627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7228;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104833724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104833735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0251;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 104833780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9461;AVGPOST=0.9964;RSQ=0.9722;ERATE=0.0005;THETA=0.0005;AC=2070;AN=2184 GT:DS:GL:BD 0.94780219 1
1 104833980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7531;AVGPOST=0.9921;RSQ=0.9879;ERATE=0.0008;THETA=0.0008;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 104834084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6095;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104834086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8555;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104834114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104834198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104834226 . TG T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5927;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104834313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104834357 . GGA G 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6524;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104834586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104834630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1044;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 104834866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104834956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104834963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104834992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104835048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104835068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6410;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104835115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9063;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104835287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5057;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104835379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104835457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0258;AVGPOST=0.9984;RSQ=0.9739;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 104835476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0234;AVGPOST=0.9968;RSQ=0.9475;ERATE=0.0007;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104835538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.651;LDAF=0.0061;AVGPOST=0.9955;RSQ=0.7123;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104835616 . CACAA C 1574 PASS INDEL;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9021;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104835818 . CAA C 785 PASS INDEL;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8903;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104835820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0012;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104835847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1410;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 104835964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104836009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0097;AVGPOST=0.9987;RSQ=0.9471;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104836170 . GGAA G 527 PASS INDEL;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9299;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104836223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8911;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104836560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7192;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104836596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104836715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8300;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104836739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9198;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104836780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104836795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1227;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 104836951 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6499;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0007;THETA=0.0005;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 104836978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0019;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 104837015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5895;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104837084 . GA G 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104837087 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7566;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0006;THETA=0.0005;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 104837133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8284;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104837199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104837216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104837228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8794;AVGPOST=0.9929;RSQ=0.9765;ERATE=0.0016;THETA=0.0006;AC=1925;AN=2184 GT:DS:GL:BD 0.88141024 1
1 104837298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6452;AVGPOST=0.9790;RSQ=0.9671;ERATE=0.0025;THETA=0.0004;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 104837338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6526;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 104837397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6532;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 104837402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4316;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104837410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0076;AVGPOST=0.9961;RSQ=0.8233;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104837421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104837430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0509;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104837432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7633;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104837473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8712;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104837499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1941;AVGPOST=0.9968;RSQ=0.9913;ERATE=0.0007;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 104837596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3747;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104837757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6665;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104837773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0326;AVGPOST=0.9974;RSQ=0.9725;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 104837790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9982;RSQ=0.9693;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104837820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8868;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104837829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1949;AVGPOST=0.9974;RSQ=0.9927;ERATE=0.0008;THETA=0.0005;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 104837897 . G GGA 4611 PASS INDEL;BAVGPOST=0.982;BRSQ=0.924;LDAF=0.1361;AVGPOST=0.9863;RSQ=0.9572;ERATE=0.0004;THETA=0.0007;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 104838027 rs60878219 A AG 2646 PASS INDEL;BAVGPOST=0.982;BRSQ=0.925;LDAF=0.1357;AVGPOST=0.9861;RSQ=0.9567;ERATE=0.0005;THETA=0.0007;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 104838029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0308;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104838070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5928;ERATE=0.0007;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104838082 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0242;AVGPOST=0.9977;RSQ=0.9621;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104838262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9196;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104838348 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104838379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104838533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9990;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104838604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0507;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104838606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104838699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104838791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104838902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104838903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104838905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8942;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104839034 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4151;AVGPOST=0.9980;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 104839044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104839109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104839130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104839181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104839182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104839209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104839250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104839406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0507;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 104839443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104839464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104839466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104839609 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104839630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3141;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 104839747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104839814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104839861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104839925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104839958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104839988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104840237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104840250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104840438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0013;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104840529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7843;ERATE=0.0012;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104840572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104840653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104840701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6174;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104840705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0073;AVGPOST=0.9964;RSQ=0.8163;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104840862 . C CA 34 PASS INDEL;BAVGPOST=0.992;BRSQ=0.508;LDAF=0.0188;AVGPOST=0.9767;RSQ=0.5142;ERATE=0.0038;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104840937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.5647;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104840938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6814;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104841052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104841090 . AT A 90 PASS INDEL;BAVGPOST=0.993;BRSQ=0.706;LDAF=0.0166;AVGPOST=0.9934;RSQ=0.8492;ERATE=0.0008;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104841108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0175;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104841109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9276;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104841169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3138;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 104841220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7119;AVGPOST=0.9944;RSQ=0.9902;ERATE=0.0010;THETA=0.0007;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 104841234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2140;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 104841385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.724;LDAF=0.0198;AVGPOST=0.9943;RSQ=0.8789;ERATE=0.0008;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104841463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9972;RSQ=0.9616;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104841514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7765;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104841554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9976;RSQ=0.9434;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104841654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 104842030 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104842195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104842285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5676;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104842318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5986;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104842358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8010;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104842433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3122;AVGPOST=0.9947;RSQ=0.9898;ERATE=0.0010;THETA=0.0046;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 104842465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104842509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104842557 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4489;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104842583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3274;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 104842764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104842842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2531;AVGPOST=0.9976;RSQ=0.9945;ERATE=0.0006;THETA=0.0005;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 104842874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104842928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0028;AVGPOST=0.9953;RSQ=0.4030;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104843390 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9356;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104843515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7286;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104843542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8794;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104843593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3142;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104843656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9242;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104843659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843688 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3380;AVGPOST=0.9904;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 104843733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6940;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104843737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104843819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6456;AVGPOST=0.9945;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=1411;AN=2184 GT:DS:GL:BD 0.64606225 1
1 104843892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8015;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104843903 . C CT 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5149;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3548;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0010;THETA=0.0005;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 104843940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104843997 rs35208245 GC G 1191 PASS INDEL;BAVGPOST=0.950;BRSQ=0.897;LDAF=0.2599;AVGPOST=0.9630;RSQ=0.9298;ERATE=0.0014;THETA=0.0004;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 104844038 rs79016346 CCT C 27755 PASS INDEL;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2813;AVGPOST=0.9943;RSQ=0.9881;ERATE=0.0008;THETA=0.0003;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 104844041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6921;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104844172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9552;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104844246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9436;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104844314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6102;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104844325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104844540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104844741 . A ACT 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104844919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104844952 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6138;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104845074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104845125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104845143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104845164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9380;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104845234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8723;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104845297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0178;AVGPOST=0.9969;RSQ=0.9290;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104845401 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.7899;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104845464 rs34342465 TC T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3621;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104845468 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104845645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104845695 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8006;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104845780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0132;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104845825 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0034;AVGPOST=0.9946;RSQ=0.3328;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104846197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.488;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4323;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104846212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2830;AVGPOST=0.9887;RSQ=0.9772;ERATE=0.0011;THETA=0.0002;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 104846341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3301;AVGPOST=0.9905;RSQ=0.9807;ERATE=0.0015;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 104846346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.7201;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104846411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0053;AVGPOST=0.9943;RSQ=0.5961;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104846452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.3331;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104846481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0013;AVGPOST=0.9977;RSQ=0.3328;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104846485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6885;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104846591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0183;AVGPOST=0.9963;RSQ=0.9146;ERATE=0.0005;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104846724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9958;RSQ=0.6521;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104846785 rs11316278 C CAAA 568 PASS INDEL;BAVGPOST=0.668;BRSQ=0.023;LDAF=0.8375;AVGPOST=0.7694;RSQ=0.3055;ERATE=0.0107;THETA=0.0005;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 104846954 . AAAT A 960 PASS INDEL;BAVGPOST=0.481;BRSQ=0.130;LDAF=0.4620;AVGPOST=0.6031;RSQ=0.2998;ERATE=0.0380;THETA=0.0009;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 104846979 . AT A 340 PASS INDEL;BAVGPOST=0.752;BRSQ=0.186;LDAF=0.2172;AVGPOST=0.7203;RSQ=0.3242;ERATE=0.0279;THETA=0.0006;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 104846983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.891;LDAF=0.2635;AVGPOST=0.9189;RSQ=0.8309;ERATE=0.0110;THETA=0.0005;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 104847062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0093;AVGPOST=0.9966;RSQ=0.8728;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104847174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7572;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104847200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8140;ERATE=0.0004;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104847203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4581;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104847249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104847255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9993;RSQ=0.9878;ERATE=0.0004;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104847315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9902;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104847323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104847335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104847337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8349;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104847515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.6876;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104847614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6743;AVGPOST=0.9921;RSQ=0.9874;ERATE=0.0009;THETA=0.0003;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 104847743 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0966;AVGPOST=0.9968;RSQ=0.9835;ERATE=0.0010;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 104847748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7067;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104847775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9377;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104847779 . AG A 8640 PASS INDEL;BAVGPOST=0.972;BRSQ=0.941;LDAF=0.2721;AVGPOST=0.9856;RSQ=0.9757;ERATE=0.0011;THETA=0.0004;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 104847882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2787;AVGPOST=0.9969;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 104847883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.3341;AVGPOST=0.9927;RSQ=0.9902;ERATE=0.0006;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 104847885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104847981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0135;AVGPOST=0.9978;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104848076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0063;AVGPOST=0.9975;RSQ=0.8373;ERATE=0.0006;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104848177 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7832;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104848191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104848245 . A AC 540 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0053;AVGPOST=0.9956;RSQ=0.7034;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104848258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8713;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104848299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104848301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0939;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 104848520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104848593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0257;AVGPOST=0.9965;RSQ=0.9471;ERATE=0.0011;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104848594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104848598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8370;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104848609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0300;AVGPOST=0.9991;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 104848740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7475;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 104849067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5363;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104849105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6720;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104849274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8364;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104849376 . G GCAGT 1348 PASS INDEL;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104849488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3263;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 104849575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9519;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104849684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8959;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104849709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4199;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0010;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 104849715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104849835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9082;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104850234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8825;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104850275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8604;ERATE=0.0004;THETA=0.0071;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104850309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8615;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104850313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5883;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104850349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104850387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104850408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4643;AVGPOST=0.9956;RSQ=0.9940;ERATE=0.0007;THETA=0.0024;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 104850425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104850426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104850472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0120;AVGPOST=0.9974;RSQ=0.9120;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104850808 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6306;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104850836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3306;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 104850844 . TTCTA T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8262;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104851014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3299;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0003;THETA=0.0061;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 104851145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6056;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104851217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.903;LDAF=0.0797;AVGPOST=0.9796;RSQ=0.9077;ERATE=0.0011;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 104851248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8548;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104851336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104851456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3074;AVGPOST=0.9823;RSQ=0.9737;ERATE=0.0015;THETA=0.0021;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 104851526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4251;ERATE=0.0005;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104851532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0106;AVGPOST=0.9933;RSQ=0.7761;ERATE=0.0004;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104851694 . T TA 167 PASS INDEL;BAVGPOST=0.991;BRSQ=0.700;LDAF=0.0191;AVGPOST=0.9880;RSQ=0.7341;ERATE=0.0014;THETA=0.0019;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104851714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8070;AVGPOST=0.9937;RSQ=0.9852;ERATE=0.0005;THETA=0.0059;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 104851964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.2702;AVGPOST=0.9825;RSQ=0.9709;ERATE=0.0003;THETA=0.0075;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 104851995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7569;ERATE=0.0008;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104852000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9991;RSQ=0.9786;ERATE=0.0004;THETA=0.0055;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104852001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0248;AVGPOST=0.9988;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104852301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104852347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0390;AVGPOST=0.9970;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 104852385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9431;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104852483 . CTGTT C 940 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0090;AVGPOST=0.9960;RSQ=0.8573;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104852553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5086;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0007;THETA=0.0006;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104852568 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104852602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1473;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 104852615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2247;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 104852667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5147;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104852683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0695;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 104852693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0033;AVGPOST=0.9947;RSQ=0.4263;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104852721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104852751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9617;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104852753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104852758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104852800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104852803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5118;AVGPOST=0.9971;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 104852828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9556;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104852831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5086;AVGPOST=0.9960;RSQ=0.9944;ERATE=0.0007;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104852858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104852999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104853038 . A AG 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8469;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104853070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7488;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104853178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104853301 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6392;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104853477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.1121;AVGPOST=0.9984;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 104853569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2771;AVGPOST=0.9885;RSQ=0.9817;ERATE=0.0016;THETA=0.0005;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 104853619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7218;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104853772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0004;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104853776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6620;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104853871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.956;LDAF=0.4926;AVGPOST=0.9788;RSQ=0.9730;ERATE=0.0020;THETA=0.0003;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 104853880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0545;AVGPOST=0.9981;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 104853945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8414;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104854100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.6898;ERATE=0.0011;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104854113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5743;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104854122 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6472;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104854147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9110;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104854298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7966;AVGPOST=0.9945;RSQ=0.9871;ERATE=0.0005;THETA=0.0001;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 104854392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0049;AVGPOST=0.9957;RSQ=0.6409;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104854668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104854718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8071;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104854794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7258;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104854817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5149;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 104854930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104854957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7902;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104854961 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0143;AVGPOST=0.9963;RSQ=0.8995;ERATE=0.0005;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104855000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2239;AVGPOST=0.9951;RSQ=0.9901;ERATE=0.0004;THETA=0.0006;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 104855007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.604;LDAF=0.0111;AVGPOST=0.9847;RSQ=0.4790;ERATE=0.0041;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104855058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5087;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 104855062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0293;AVGPOST=0.9981;RSQ=0.9741;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104855142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7926;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104855220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9655;ERATE=0.0003;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104855256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5811;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104855284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5139;AVGPOST=0.9969;RSQ=0.9958;ERATE=0.0007;THETA=0.0004;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 104855286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104855331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5085;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104855342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104855394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104855412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9982;RSQ=0.8770;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104855470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6150;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104855503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0684;AVGPOST=0.9970;RSQ=0.9816;ERATE=0.0007;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 104855509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104855553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1480;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 104855562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5080;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104855596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104855638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7720;ERATE=0.0008;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104855658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104856131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8650;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104856147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8068;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104856155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9337;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104856196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.706;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7539;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104856228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8863;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104856270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0201;AVGPOST=0.9973;RSQ=0.9459;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104856456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9412;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104856501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0159;AVGPOST=0.9967;RSQ=0.9185;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104856552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3918;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104856553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104856596 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0331;AVGPOST=0.9987;RSQ=0.9838;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104856627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.758;LDAF=0.0102;AVGPOST=0.9956;RSQ=0.8299;ERATE=0.0006;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104856631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0562;AVGPOST=0.9958;RSQ=0.9727;ERATE=0.0006;THETA=0.0007;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104856823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8624;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104856961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5085;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 104856998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6832;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104857111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104857123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104857148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7089;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104857205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9573;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104857220 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5691;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104857328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.5061;AVGPOST=0.9865;RSQ=0.9836;ERATE=0.0012;THETA=0.0004;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 104857342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1315;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 104857557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7018;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104857593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104857761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104857762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104857921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7744;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 104858054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1408;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 104858184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6975;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104858222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104858355 . TG T 1270 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104858431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.560;LDAF=0.0091;AVGPOST=0.9896;RSQ=0.5671;ERATE=0.0008;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104858537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.854;LDAF=0.1326;AVGPOST=0.9847;RSQ=0.9452;ERATE=0.0014;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 104858539 . AGGAGGGGAGGGGAGG A 351 PASS INDEL;BAVGPOST=0.998;BRSQ=0.606;LDAF=0.0081;AVGPOST=0.9877;RSQ=0.3603;ERATE=0.0012;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104858542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0114;AVGPOST=0.9965;RSQ=0.8703;ERATE=0.0010;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104858562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.7361;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104858659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1359;AVGPOST=0.9979;RSQ=0.9911;ERATE=0.0008;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 104858816 . TC T 28 PASS INDEL;BAVGPOST=0.972;BRSQ=0.449;LDAF=0.0373;AVGPOST=0.9576;RSQ=0.5729;ERATE=0.0053;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104858823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.717;LDAF=0.0485;AVGPOST=0.9613;RSQ=0.6788;ERATE=0.0087;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 104858856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9965;RSQ=0.8014;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104858880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.520;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3823;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104858963 . T TCA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6398;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104859047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0918;AVGPOST=0.9972;RSQ=0.9850;ERATE=0.0004;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 104859060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3869;AVGPOST=0.9916;RSQ=0.9851;ERATE=0.0013;THETA=0.0003;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 104859064 . TATA T 2262 PASS INDEL;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0236;AVGPOST=0.9980;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104859086 . GGCTTGA G 3863 PASS INDEL;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0235;AVGPOST=0.9981;RSQ=0.9722;ERATE=0.0004;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104859090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7387;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104859292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104859427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104859540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104859562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.8081;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104859563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104859855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7732;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0010;THETA=0.0002;AC=1688;AN=2184 GT:DS:GL:BD 0.77289379 1
1 104859935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1325;AVGPOST=0.9986;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 104860128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104860154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7010;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104860258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2268;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 104860281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5669;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104860288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104860391 . TTG T 1724 PASS INDEL;BAVGPOST=0.828;BRSQ=0.667;LDAF=0.2634;AVGPOST=0.8551;RSQ=0.7668;ERATE=0.0049;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 104860441 rs34008190 TG T 48674 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3869;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0006;THETA=0.0006;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 104860442 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4451;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104860463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104860501 . AC A 3041 PASS INDEL;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0245;AVGPOST=0.9986;RSQ=0.9757;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104860512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104860616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1544;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 104860659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104860807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6925;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104860887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104860890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1354;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104860970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104861179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104861192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104861212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104861267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104861300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104861349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104861368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104861374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104861376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8671;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104861553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3365;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0009;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 104861674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7367;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 104861728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104861759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3869;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 104861778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.385;LDAF=0.1505;AVGPOST=0.8693;RSQ=0.6221;ERATE=0.0125;THETA=0.0002;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 104861869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.813;BRSQ=0.731;LDAF=0.5305;AVGPOST=0.8083;RSQ=0.7284;ERATE=0.0243;THETA=0.0006;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 104861922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0104;AVGPOST=0.9926;RSQ=0.7019;ERATE=0.0013;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104861996 rs59282672 CA C 1520 PASS INDEL;BAVGPOST=0.728;BRSQ=0.439;LDAF=0.3268;AVGPOST=0.7170;RSQ=0.4638;ERATE=0.0460;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 104862052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.608;LDAF=0.0479;AVGPOST=0.9496;RSQ=0.5932;ERATE=0.0079;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 104862225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0094;AVGPOST=0.9959;RSQ=0.8191;ERATE=0.0009;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104862328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.880;LDAF=0.1044;AVGPOST=0.9830;RSQ=0.9360;ERATE=0.0009;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 104862545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104862649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104862707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104862722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104862787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1110;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 104862831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.4441;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104863031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9588;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104863043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104863101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104863191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.8175;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104863221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8009;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104863244 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6240;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104863254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3866;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104863346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104863479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5250;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104863587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3669;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 104863639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9562;AVGPOST=0.9961;RSQ=0.9667;ERATE=0.0005;THETA=0.0002;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 104863671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1125;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 104863706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9796;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104863949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8632;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104863963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1346;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 104864020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3785;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 104864112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9152;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=2001;AN=2184 GT:DS:GL:BD 0.91620880 1
1 104864241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104864246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7410;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104864277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104864321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104864360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8810;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104864361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2013;AVGPOST=0.9952;RSQ=0.9888;ERATE=0.0012;THETA=0.0001;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 104864377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104864437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 104864455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104864574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9146;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0004;THETA=0.0020;AC=2001;AN=2184 GT:DS:GL:BD 0.91620880 1
1 104864671 rs75285701 GC G 8781 PASS INDEL;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1132;AVGPOST=0.9940;RSQ=0.9775;ERATE=0.0008;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 104864687 . CT C 1221 PASS INDEL;BAVGPOST=0.987;BRSQ=0.940;LDAF=0.1112;AVGPOST=0.9868;RSQ=0.9528;ERATE=0.0006;THETA=0.0003;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 104864689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104864979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1382;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 104865063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6223;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104865234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104865273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8595;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104865282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7422;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104865325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104865382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104865473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1820;AVGPOST=0.9971;RSQ=0.9921;ERATE=0.0006;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 104865505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0122;AVGPOST=0.9968;RSQ=0.8904;ERATE=0.0007;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104865541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104865626 . A AG 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6116;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104865761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0402;AVGPOST=0.9990;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 104865930 . G GC 110 PASS INDEL;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8467;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104865955 . CTG C 33 PASS INDEL;BAVGPOST=0.993;BRSQ=0.637;LDAF=0.0196;AVGPOST=0.9746;RSQ=0.5035;ERATE=0.0042;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104866084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0161;AVGPOST=0.9985;RSQ=0.9627;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104866115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7000;ERATE=0.0010;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104866140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4367;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104866256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1186;AVGPOST=0.9969;RSQ=0.9887;ERATE=0.0005;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 104866645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1177;AVGPOST=0.9916;RSQ=0.9700;ERATE=0.0009;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 104866805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.223;LDAF=0.0436;AVGPOST=0.9297;RSQ=0.3381;ERATE=0.0040;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104866997 . C CG 66 PASS INDEL;BAVGPOST=0.875;BRSQ=0.107;LDAF=0.1672;AVGPOST=0.7744;RSQ=0.3612;ERATE=0.0108;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 104867013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0092;AVGPOST=0.9945;RSQ=0.7392;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104867102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104867168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104867254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8963;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104867263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0487;AVGPOST=0.9984;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104867367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9189;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104867368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8680;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104867638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104867642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104867695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104868072 . TTC T 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7427;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104868145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104868224 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104868381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0079;AVGPOST=0.9936;RSQ=0.6883;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104868847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104868886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104868905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.9211;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104868926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104869030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104869031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3772;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 104869163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1902;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 104869182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9744;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104869232 . A AAGAG 196 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4947;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104869235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8057;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104869370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 104869377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104869382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.5098;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104869402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0141;AVGPOST=0.9988;RSQ=0.9709;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104869503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7688;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104869529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5440;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104869540 . CT C 202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0049;AVGPOST=0.9961;RSQ=0.7001;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104869638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3738;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 104869697 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104869803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0004;THETA=0.0031;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104869853 . A AC 888 PASS INDEL;BAVGPOST=0.994;BRSQ=0.892;LDAF=0.0302;AVGPOST=0.9945;RSQ=0.9236;ERATE=0.0014;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 104869997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6273;ERATE=0.0010;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104870142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5581;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104870146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104870244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104870313 . A AT 285 PASS INDEL;BAVGPOST=0.996;BRSQ=0.684;LDAF=0.0074;AVGPOST=0.9943;RSQ=0.7056;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104870342 . CTGAA C 17696 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1409;AVGPOST=0.9913;RSQ=0.9747;ERATE=0.0016;THETA=0.0015;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 104870415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104870448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104870456 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104870572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0041;AVGPOST=0.9953;RSQ=0.5362;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104870666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9342;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104870672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5873;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 104870742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5316;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104870816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6945;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104870918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7908;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104871025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5218;AVGPOST=0.9979;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 104871056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104871102 . C CG 164 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0046;AVGPOST=0.9957;RSQ=0.5559;ERATE=0.0016;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104871161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4776;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104871194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9022;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104871419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104871538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104871674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104871814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104871817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0550;AVGPOST=0.9986;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 104871832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104871857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104871982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104871985 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104872017 . AAAC A 947 PASS INDEL;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0106;AVGPOST=0.9970;RSQ=0.8771;ERATE=0.0006;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104872167 . CA C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6126;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104872173 . CAT C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104872304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7253;ERATE=0.0005;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104872305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6940;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104872337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104872410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8920;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104872419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104872541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104872575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8574;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104872641 . T TA 667 PASS INDEL;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8770;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104872886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5293;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104872986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104873055 rs71748744 C CT 737 PASS INDEL;BAVGPOST=0.570;BRSQ=0.123;LDAF=0.3460;AVGPOST=0.6385;RSQ=0.3064;ERATE=0.0286;THETA=0.0016;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 104873131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.438;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6520;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104873249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6944;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104873453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104873551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104873697 . GATACGGCC G 4054 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0152;AVGPOST=0.9952;RSQ=0.8785;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104873718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0101;AVGPOST=0.9992;RSQ=0.9715;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104873833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104874054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104874157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104874281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9073;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104874325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.443;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6433;ERATE=0.0008;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104874572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.822;LDAF=0.8658;AVGPOST=0.9294;RSQ=0.7634;ERATE=0.0071;THETA=0.0007;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 104874578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104874706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104874897 rs3835423 AG A 33460 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.9061;AVGPOST=0.9859;RSQ=0.9338;ERATE=0.0007;THETA=0.0006;AC=1987;AN=2184 GT:DS:GL:BD 0.90979856 1
1 104875263 . ACTT A 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8070;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104875733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104875814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104875870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104875874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104875990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104876126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104876207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104876216 . A AG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4313;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104876287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104876370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104876452 . G GGGC 675 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8541;ERATE=0.0006;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104876474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104876506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104876683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104876685 . AG A 80 PASS INDEL;BAVGPOST=0.996;BRSQ=0.530;LDAF=0.0078;AVGPOST=0.9926;RSQ=0.6130;ERATE=0.0012;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104876840 . GC G 225 PASS INDEL;BAVGPOST=0.993;BRSQ=0.560;LDAF=0.0073;AVGPOST=0.9945;RSQ=0.6729;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104876844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104876868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104876872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104876917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104877003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104877073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104877110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5840;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104877155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9197;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104877171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6714;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104877175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9399;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104877328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0305;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104877479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3470;AVGPOST=0.9947;RSQ=0.9908;ERATE=0.0005;THETA=0.0012;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 104877654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0246;AVGPOST=0.9960;RSQ=0.9378;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104877708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.7970;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104877750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104877864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6436;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104877930 . C CATG 394 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0038;AVGPOST=0.9945;RSQ=0.4452;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104877950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0354;AVGPOST=0.9984;RSQ=0.9797;ERATE=0.0006;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104878020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5404;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0008;THETA=0.0006;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 104878299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5745;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104878458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0354;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 104878632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9518;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104878685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0055;AVGPOST=0.9977;RSQ=0.8424;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104878833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0992;AVGPOST=0.9970;RSQ=0.9879;ERATE=0.0004;THETA=0.0007;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 104878957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6325;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104879029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0083;AVGPOST=0.9967;RSQ=0.8452;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104879030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8949;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104879047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104879050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104879287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104879581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0346;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 104879619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104879620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104879773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6290;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104879834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5344;AVGPOST=0.9931;RSQ=0.9903;ERATE=0.0009;THETA=0.0008;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 104880009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104880024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6643;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104880269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0180;AVGPOST=0.9955;RSQ=0.8927;ERATE=0.0007;THETA=0.0045;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104880472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.954;LDAF=0.3901;AVGPOST=0.9627;RSQ=0.9383;ERATE=0.0049;THETA=0.0012;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 104880724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.979;LDAF=0.6022;AVGPOST=0.9790;RSQ=0.9703;ERATE=0.0010;THETA=0.0005;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 104880758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.948;LDAF=0.4534;AVGPOST=0.9659;RSQ=0.9505;ERATE=0.0026;THETA=0.0017;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 104880784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.842;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.8973;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104881090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0003;THETA=0.0079;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104881099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0117;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104881103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104881241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104881299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104881305 rs5773115 C CT 5615 PASS INDEL;BAVGPOST=0.984;BRSQ=0.889;LDAF=0.0657;AVGPOST=0.9876;RSQ=0.9276;ERATE=0.0010;THETA=0.0017;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 104881337 . T TC 493 PASS INDEL;BAVGPOST=0.872;BRSQ=0.354;LDAF=0.1108;AVGPOST=0.9019;RSQ=0.5954;ERATE=0.0031;THETA=0.0024;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 104881340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5669;ERATE=0.0007;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104881570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9290;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104881679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7797;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104881682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104881707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104881744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1184;AVGPOST=0.9965;RSQ=0.9905;ERATE=0.0006;THETA=0.0007;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 104881861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7500;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104881965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104882013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8458;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104882074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104882229 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8843;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104882280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8900;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104882363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8270;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104882375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0032;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104882455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104882565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104882566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104882680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0199;AVGPOST=0.9987;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104882700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8247;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104882760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104882917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104882945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104883123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104883171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104883221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104883230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104883238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104883301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.5540;AVGPOST=0.9713;RSQ=0.9641;ERATE=0.0029;THETA=0.0007;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 104883543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.656;LDAF=0.0112;AVGPOST=0.9925;RSQ=0.7619;ERATE=0.0007;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104883906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5741;AVGPOST=0.9925;RSQ=0.9898;ERATE=0.0011;THETA=0.0011;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 104883922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0059;AVGPOST=0.9953;RSQ=0.6792;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104884007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.834;LDAF=0.1783;AVGPOST=0.9548;RSQ=0.8971;ERATE=0.0012;THETA=0.0007;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 104884008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5733;AVGPOST=0.9973;RSQ=0.9966;ERATE=0.0005;THETA=0.0010;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 104884259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5728;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 104884280 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104884310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6520;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104884535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104884569 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104884627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5726;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 104884684 . A AT 10285 PASS INDEL;BAVGPOST=0.911;BRSQ=0.875;LDAF=0.5165;AVGPOST=0.9065;RSQ=0.8811;ERATE=0.0123;THETA=0.0007;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 104884686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5732;AVGPOST=0.9974;RSQ=0.9965;ERATE=0.0005;THETA=0.0012;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 104884689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7442;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104884784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4634;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104884823 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0914;AVGPOST=0.9933;RSQ=0.9697;ERATE=0.0006;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 104884942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2317;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 104884992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5730;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 104885218 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0088;AVGPOST=0.9980;RSQ=0.9068;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104885489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7599;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104885541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1994;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 104885556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2322;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 104885563 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7404;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104885701 . TGCC T 22872 PASS INDEL;BAVGPOST=0.936;BRSQ=0.895;LDAF=0.5321;AVGPOST=0.9298;RSQ=0.9067;ERATE=0.0146;THETA=0.0005;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 104885800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6303;ERATE=0.0005;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104885877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885915 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8268;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 104885926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8404;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104885930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104885931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5551;AVGPOST=0.9953;RSQ=0.9939;ERATE=0.0009;THETA=0.0006;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 104885947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104886040 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5734;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0009;THETA=0.0004;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 104886074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7286;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104886125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0180;AVGPOST=0.9967;RSQ=0.9167;ERATE=0.0009;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104886162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.481;LDAF=0.0105;AVGPOST=0.9906;RSQ=0.6471;ERATE=0.0007;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104886217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3322;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104886253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104886318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9827;ERATE=0.0005;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104886327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3579;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104886330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104886439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1011;AVGPOST=0.9968;RSQ=0.9875;ERATE=0.0004;THETA=0.0009;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104886694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104886736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0151;AVGPOST=0.9973;RSQ=0.9263;ERATE=0.0006;THETA=0.0018;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104886800 rs113114314 TAA T 73 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5485;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104886810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.975;LDAF=0.5577;AVGPOST=0.9940;RSQ=0.9920;ERATE=0.0009;THETA=0.0011;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 104886869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.962;LDAF=0.5696;AVGPOST=0.9830;RSQ=0.9759;ERATE=0.0016;THETA=0.0007;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 104886899 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104887328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9645;ERATE=0.0004;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104887361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104887414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9545;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0004;THETA=0.0013;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 104887436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104887494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8075;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104887625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9548;AVGPOST=0.9991;RSQ=0.9910;ERATE=0.0004;THETA=0.0024;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 104887779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9686;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0020;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 104887860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9684;AVGPOST=0.9989;RSQ=0.9838;ERATE=0.0005;THETA=0.0010;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 104887883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7130;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104887904 . CCCCCG C 85641 PASS INDEL;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.9639;AVGPOST=0.9913;RSQ=0.8982;ERATE=0.0027;THETA=0.0018;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 104887927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9695;AVGPOST=0.9984;RSQ=0.9769;ERATE=0.0004;THETA=0.0014;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 104888061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104888062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104888137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9552;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0019;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 104888164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104888183 . T TC 300 PASS INDEL;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0184;AVGPOST=0.9862;RSQ=0.6953;ERATE=0.0012;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104888365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9184;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104888569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104888639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9297;ERATE=0.0004;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104888640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104888696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9551;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0004;THETA=0.0010;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 104888709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104888757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9551;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0009;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 104888856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.979;LDAF=0.3926;AVGPOST=0.9759;RSQ=0.9688;ERATE=0.0027;THETA=0.0009;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 104888875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9552;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0017;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 104888882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9835;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104889199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.817;LDAF=0.0166;AVGPOST=0.9883;RSQ=0.7214;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104889315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9222;ERATE=0.0003;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104889407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104889433 . T TG 335 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5317;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104889520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9729;ERATE=0.0004;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104889596 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0126;AVGPOST=0.9967;RSQ=0.9073;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104889720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7567;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104889773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5284;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104889844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9657;AVGPOST=0.9958;RSQ=0.9529;ERATE=0.0005;THETA=0.0011;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 104890119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5674;ERATE=0.0009;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104890123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7943;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104890432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.756;LDAF=0.0077;AVGPOST=0.9961;RSQ=0.7937;ERATE=0.0007;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104890559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9717;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0004;THETA=0.0017;AC=2123;AN=2184 GT:DS:GL:BD 0.97206962 1
1 104890618 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5980;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9642;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104890777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104890791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5131;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104890876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104891052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104891069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8348;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104891199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.638;LDAF=0.0056;AVGPOST=0.9953;RSQ=0.6630;ERATE=0.0007;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104891206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0423;AVGPOST=0.9947;RSQ=0.9487;ERATE=0.0004;THETA=0.0016;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 104891253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4735;ERATE=0.0006;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104891286 rs57620317 AG A 2028 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9737;ERATE=0.0004;THETA=0.0021;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104891438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104891496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104891505 . TA T 122 PASS INDEL;BAVGPOST=0.949;BRSQ=0.109;LDAF=0.0313;AVGPOST=0.9561;RSQ=0.4161;ERATE=0.0027;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104891556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9707;AVGPOST=0.9983;RSQ=0.9771;ERATE=0.0004;THETA=0.0021;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 104891582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.7883;ERATE=0.0004;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104891619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9699;AVGPOST=0.9969;RSQ=0.9590;ERATE=0.0007;THETA=0.0012;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 104891637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4066;ERATE=0.0006;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104891644 . A AT 216 PASS INDEL;BAVGPOST=0.977;BRSQ=0.474;LDAF=0.0379;AVGPOST=0.9512;RSQ=0.4675;ERATE=0.0089;THETA=0.0015;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104891856 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9514;AVGPOST=0.9969;RSQ=0.9744;ERATE=0.0005;THETA=0.0019;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 104891901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3450;ERATE=0.0008;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104891934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8536;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104892179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0239;AVGPOST=0.9970;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104892229 . C CTG 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0066;AVGPOST=0.9925;RSQ=0.5471;ERATE=0.0009;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104892300 . T TGC 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7327;ERATE=0.0008;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104892303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0383;AVGPOST=0.9993;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104892500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5593;AVGPOST=0.9925;RSQ=0.9892;ERATE=0.0009;THETA=0.0006;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 104892516 rs60114656 AAT A 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7988;ERATE=0.0012;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104892534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104892536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104892716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8296;ERATE=0.0010;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104892801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104892804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4329;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104892911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.935;LDAF=0.0385;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0018;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104892913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8359;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104893128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9588;ERATE=0.0005;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104893204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8846;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104893215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3670;AVGPOST=0.9942;RSQ=0.9909;ERATE=0.0005;THETA=0.0027;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 104893224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5094;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0008;THETA=0.0003;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 104893567 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9841;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104893655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104893739 . TAGAAA T 2027 PASS INDEL;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8656;ERATE=0.0004;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104893874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104893929 . G GA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6906;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104894090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104894178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8950;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104894319 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8114;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104894320 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104894401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1551;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 104894487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0392;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 104894493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104894670 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104894722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.915;LDAF=0.1362;AVGPOST=0.9744;RSQ=0.9179;ERATE=0.0059;THETA=0.0014;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 104894778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6250;AVGPOST=0.9960;RSQ=0.9929;ERATE=0.0010;THETA=0.0003;AC=1366;AN=2184 GT:DS:GL:BD 0.62545788 1
1 104894866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7466;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104894895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5416;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0010;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 104895016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104895101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7742;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104895143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3867;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 104895178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1086;AVGPOST=0.9978;RSQ=0.9913;ERATE=0.0005;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104895193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104895284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104895381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5056;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104895432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3348;AVGPOST=0.9895;RSQ=0.9836;ERATE=0.0010;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 104895456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7240;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104895489 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4511;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104895525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104895557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104895604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104895663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.9076;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104895752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0386;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0037;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104895771 . ATC A 9088 PASS INDEL;BAVGPOST=0.990;BRSQ=0.966;LDAF=0.1520;AVGPOST=0.9960;RSQ=0.9875;ERATE=0.0005;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 104896163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6979;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104896320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1995;AVGPOST=0.9952;RSQ=0.9879;ERATE=0.0014;THETA=0.0004;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 104896330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.9005;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104896368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5674;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104896381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104896428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104896638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3423;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 104896695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104896766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104896800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8770;ERATE=0.0014;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104897035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104897253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6620;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5600;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897484 . G GA 1798 PASS INDEL;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0116;AVGPOST=0.9986;RSQ=0.9490;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104897508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7376;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0016;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 104897772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0124;AVGPOST=0.9981;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104897790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104897846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104897908 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104898232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104898286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6955;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104898351 . TA T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6598;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104898359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0295;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104898399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7246;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104898568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104898599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104898709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104898719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104899130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8051;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104899262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899324 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2704;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 104899413 . T TTTTG 7735 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0288;AVGPOST=0.9985;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 104899449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1445;AVGPOST=0.9966;RSQ=0.9897;ERATE=0.0007;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 104899566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104899710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104899850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104899928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1945;AVGPOST=0.9962;RSQ=0.9897;ERATE=0.0008;THETA=0.0004;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 104900054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0181;AVGPOST=0.9938;RSQ=0.8702;ERATE=0.0011;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104900106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.6015;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104900132 . T TC 355 PASS INDEL;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7950;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104900306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6811;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104900766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104900781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104900879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7121;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104901131 . TTAC T 231 PASS INDEL;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7813;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104901138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901191 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104901369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901626 . AAC A 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6354;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104901686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104901891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104902044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104902162 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104902270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4855;AVGPOST=0.9956;RSQ=0.9950;ERATE=0.0005;THETA=0.0001;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 104902439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104902604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5181;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 104902637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104902674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104902774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3638;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 104902821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104902855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8188;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104902864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104902892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0903;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0002;THETA=0.0007;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 104902929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9144;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104902959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1100;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 104902960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104903090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5851;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104903099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104903172 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1098;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 104903184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0268;AVGPOST=0.9971;RSQ=0.9581;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104903291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0202;AVGPOST=0.9978;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104903324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.837;LDAF=0.0212;AVGPOST=0.9851;RSQ=0.7343;ERATE=0.0018;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104903351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.945;LDAF=0.4404;AVGPOST=0.9303;RSQ=0.9070;ERATE=0.0093;THETA=0.0003;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 104903355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.733;LDAF=0.0601;AVGPOST=0.9512;RSQ=0.6762;ERATE=0.0059;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 104903357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.780;LDAF=0.0777;AVGPOST=0.9689;RSQ=0.8376;ERATE=0.0011;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 104903373 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3628;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0007;THETA=0.0005;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 104903585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0193;AVGPOST=0.9989;RSQ=0.9760;ERATE=0.0005;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104903663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6792;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104903666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0328;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104903739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104903816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104903934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104904081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104904130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104904131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104904188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104904196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9405;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104904213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.930;LDAF=0.0513;AVGPOST=0.9918;RSQ=0.9387;ERATE=0.0005;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 104904252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104904253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9770;ERATE=0.0002;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104904260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4915;AVGPOST=0.9975;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 104904338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7261;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104904426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104904566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0149;AVGPOST=0.9987;RSQ=0.9663;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104904593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104904653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6044;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104904654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6330;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104904657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3622;AVGPOST=0.9950;RSQ=0.9922;ERATE=0.0012;THETA=0.0007;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 104904661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.2538;ERATE=0.0005;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104904667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104904881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0002;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104904912 . GCAAA G 103 PASS INDEL;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0114;AVGPOST=0.9899;RSQ=0.6393;ERATE=0.0030;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104904927 . C CA 934 PASS INDEL;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0083;AVGPOST=0.9977;RSQ=0.8899;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104904940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104904955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7434;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104905008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9698;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104905144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0182;AVGPOST=0.9989;RSQ=0.9779;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104905251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104905461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104905463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104905539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104905634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104905680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3644;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 104905718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3631;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 104905830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104905883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 104905895 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104905917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104905958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0537;AVGPOST=0.9966;RSQ=0.9729;ERATE=0.0003;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 104905983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104906019 . CACA C 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5155;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104906095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104906147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8989;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104906177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104906228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104906342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104906445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104906488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8013;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104906589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7794;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104906611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4768;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0005;THETA=0.0005;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 104906679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104906756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104906856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3637;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 104906874 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4766;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 104906921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104906935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1100;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 104907023 . TTCATTAG T 1109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9996;RSQ=0.9714;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104907099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104907275 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8194;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104907509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0850;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 104907749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104907791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104907836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0864;AVGPOST=0.9983;RSQ=0.9926;ERATE=0.0006;THETA=0.0010;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 104907859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8997;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104907901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1088;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104907989 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104908031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 104908038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104908092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4813;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0010;THETA=0.0003;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 104908126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9883;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0004;THETA=0.0008;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 104908172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0389;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104908411 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104908575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6796;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104908613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0923;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0005;THETA=0.0027;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 104908663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7315;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104908703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104908706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104908711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3585;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0006;THETA=0.0008;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 104908762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0851;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0010;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 104908914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0083;AVGPOST=0.9949;RSQ=0.7508;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104908933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0065;AVGPOST=0.9968;RSQ=0.7997;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104908976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.957;LDAF=0.0843;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0003;THETA=0.0011;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 104908989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6354;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104909005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1090;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104909054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8719;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104909104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104909145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104909461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9481;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104909573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.4723;AVGPOST=0.9763;RSQ=0.9631;ERATE=0.0028;THETA=0.0003;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 104909607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7125;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 104909647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2019;AVGPOST=0.9969;RSQ=0.9921;ERATE=0.0006;THETA=0.0004;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 104909701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4445;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0006;THETA=0.0002;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 104909723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0594;AVGPOST=0.9962;RSQ=0.9759;ERATE=0.0004;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 104909766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104909801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0407;AVGPOST=0.9981;RSQ=0.9815;ERATE=0.0006;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 104909827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104909843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4801;AVGPOST=0.9959;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 104909858 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4824;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 104909934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9868;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 104909987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9195;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104910073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104910296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7125;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 104910372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910529 . TTCCTC T 900 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8016;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104910543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5514;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104910740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9327;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104910751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8395;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104910896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9204;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104910959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4445;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0007;THETA=0.0002;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 104910979 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5804;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104911015 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0389;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104911082 . CTTTA C 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104911188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8014;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104911223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8527;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104911445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.2198;AVGPOST=0.9887;RSQ=0.9778;ERATE=0.0003;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 104911448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.959;LDAF=0.2198;AVGPOST=0.9883;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 104911450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104911451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.550;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7147;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104911493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.927;LDAF=0.4777;AVGPOST=0.9795;RSQ=0.9663;ERATE=0.0024;THETA=0.0003;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 104911494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.1209;AVGPOST=0.9767;RSQ=0.9191;ERATE=0.0008;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 104911538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.535;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5241;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104911591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104911623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.876;LDAF=0.4554;AVGPOST=0.9120;RSQ=0.8610;ERATE=0.0183;THETA=0.0007;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 104911695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4828;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0004;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 104911785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7098;AVGPOST=0.9954;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 104912023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.934;LDAF=0.4776;AVGPOST=0.9901;RSQ=0.9843;ERATE=0.0007;THETA=0.0002;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 104912046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8665;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104912052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4435;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0006;THETA=0.0001;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 104912158 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104912233 . GGT G 1092 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9219;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104912524 rs35342449 C CG 54 PASS INDEL;BAVGPOST=0.934;BRSQ=0.218;LDAF=0.1097;AVGPOST=0.8434;RSQ=0.3407;ERATE=0.0088;THETA=0.0024;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 104912843 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0188;AVGPOST=0.9947;RSQ=0.8913;ERATE=0.0008;THETA=0.0016;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104912845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0079;AVGPOST=0.9945;RSQ=0.7407;ERATE=0.0005;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104912916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7388;ERATE=0.0006;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104912982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0131;AVGPOST=0.9982;RSQ=0.9421;ERATE=0.0003;THETA=0.0029;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104913009 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7292;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104913089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4568;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104913097 . A AGG 55 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0056;AVGPOST=0.9950;RSQ=0.6140;ERATE=0.0024;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104913106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104913239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104913375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8067;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104913391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104913495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8273;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104913545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104913618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9549;ERATE=0.0003;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104913739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104913761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0620;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0019;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 104913794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104913940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9755;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104914070 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6333;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104914212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4139;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104914305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104914516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104914564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8119;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104914599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104914717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7757;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104914758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9244;ERATE=0.0005;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104914838 rs112741586 T TTCTG 28251 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0814;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0004;THETA=0.0026;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 104914918 . CTTCT C 387 PASS INDEL;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0084;AVGPOST=0.9935;RSQ=0.6841;ERATE=0.0023;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104914944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9159;ERATE=0.0006;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104914973 . TTCTC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6284;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104915005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5115;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104915057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0079;AVGPOST=0.9970;RSQ=0.8591;ERATE=0.0009;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104915102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0109;AVGPOST=0.9968;RSQ=0.8792;ERATE=0.0005;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104915123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8767;ERATE=0.0005;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104915131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5703;ERATE=0.0005;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104915299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104915327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104915511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8278;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104915616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8636;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104915710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9151;ERATE=0.0004;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104915718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104915737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0158;AVGPOST=0.9982;RSQ=0.9528;ERATE=0.0005;THETA=0.0032;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104915755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104915765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0005;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104915814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0078;AVGPOST=0.9962;RSQ=0.8137;ERATE=0.0005;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104916022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8282;ERATE=0.0005;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104916235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104916275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9376;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104916350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8751;ERATE=0.0003;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104916387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6154;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104916533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0811;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0004;THETA=0.0012;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 104916556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9834;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104916661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104916734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0020;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104916762 . C CAG 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104916773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5394;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104916832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8659;ERATE=0.0003;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104916833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0004;THETA=0.0011;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104916845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104916976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104916999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104917085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104917245 . C CA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5709;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104917249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104917296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7081;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=1547;AN=2184 GT:DS:GL:BD 0.70833331 1
1 104917346 . TATG T 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5884;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104917384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104917389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0961;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 104917424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6915;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104917549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104917710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.6726;AVGPOST=0.9574;RSQ=0.9263;ERATE=0.0071;THETA=0.0004;AC=1486;AN=2184 GT:DS:GL:BD 0.68040293 1
1 104917770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0228;AVGPOST=0.9970;RSQ=0.9456;ERATE=0.0006;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104917824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1464;AVGPOST=0.9819;RSQ=0.9439;ERATE=0.0020;THETA=0.0003;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 104917893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.638;LDAF=0.0108;AVGPOST=0.9962;RSQ=0.8458;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104917966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1392;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 104918069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104918343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104918423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8851;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104918452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8980;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104918519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6719;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104918589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7368;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104918597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104918605 . CTA C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104918668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104918720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104918721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7460;AVGPOST=0.9964;RSQ=0.9928;ERATE=0.0005;THETA=0.0003;AC=1631;AN=2184 GT:DS:GL:BD 0.74679488 1
1 104918953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104918996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6520;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104919010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1240;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 104919042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104919089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104919155 rs34791194 ATGT A 40424 PASS INDEL;BAVGPOST=0.976;BRSQ=0.950;LDAF=0.3297;AVGPOST=0.9920;RSQ=0.9853;ERATE=0.0005;THETA=0.0004;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 104919249 . TGTC T 13483 PASS INDEL;BAVGPOST=0.974;BRSQ=0.945;LDAF=0.3178;AVGPOST=0.9723;RSQ=0.9510;ERATE=0.0052;THETA=0.0015;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 104919253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104919351 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2284;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 104919409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104919597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104919658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104919672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104919756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104919944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3348;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 104919991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104920029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5332;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104920067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9530;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104920214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6886;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0005;THETA=0.0008;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 104920281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104920385 rs67139639 CT C 25736 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2275;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 104920393 . TC T 35021 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.9950;AVGPOST=0.9936;RSQ=0.4673;ERATE=0.0017;THETA=0.0005;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 104920396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8372;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104920409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104920438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104920591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0931;AVGPOST=0.9982;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 104920594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9208;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104920705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9774;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104920719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0250;AVGPOST=0.9956;RSQ=0.9267;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104920727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104920782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9970;RSQ=0.9202;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104920868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1240;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 104920891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104920911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8354;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104921018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104921159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104921181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1263;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0015;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 104921234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104921249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9037;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104921254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104921293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104921294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1240;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 104921329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104921380 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9777;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104921409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7167;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104921554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.5415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104921575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104921636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7304;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104921664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2531;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104921683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1688;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 104921852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0095;AVGPOST=0.9980;RSQ=0.9235;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104921890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104921943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.824;LDAF=0.0098;AVGPOST=0.9977;RSQ=0.8951;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104922018 . GGT G 10975 PASS INDEL;BAVGPOST=0.925;BRSQ=0.861;LDAF=0.6358;AVGPOST=0.8591;RSQ=0.7843;ERATE=0.0249;THETA=0.0002;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 104922153 rs72510639 TGG T 30508 PASS INDEL;BAVGPOST=0.932;BRSQ=0.876;LDAF=0.6670;AVGPOST=0.9259;RSQ=0.8792;ERATE=0.0110;THETA=0.0010;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 104922155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9955;RSQ=0.8994;ERATE=0.0007;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104922195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0184;AVGPOST=0.9933;RSQ=0.8626;ERATE=0.0008;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104922214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.811;LDAF=0.0268;AVGPOST=0.9925;RSQ=0.8810;ERATE=0.0005;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104922215 . C CA 463 PASS INDEL;BAVGPOST=0.989;BRSQ=0.685;LDAF=0.0269;AVGPOST=0.9700;RSQ=0.5388;ERATE=0.0069;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104922234 . AAAAAAAC A 1010 PASS INDEL;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0103;AVGPOST=0.9964;RSQ=0.8457;ERATE=0.0007;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104922236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0823;AVGPOST=0.9981;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 104922451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104922473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0728;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 104922514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0817;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0032;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 104922520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6694;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104922534 . AT A 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4914;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104922551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104922585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104922639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9004;ERATE=0.0010;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104922642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104922695 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7239;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104922718 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5031;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104922810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104922852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0018;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104922881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1886;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 104922960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8662;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104922967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104923028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0841;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 104923093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104923122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104923149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0224;AVGPOST=0.9986;RSQ=0.9769;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104923189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8875;AVGPOST=0.9973;RSQ=0.9894;ERATE=0.0004;THETA=0.0005;AC=1938;AN=2184 GT:DS:GL:BD 0.88736266 1
1 104923244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6518;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0004;THETA=0.0014;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 104923265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7935;ERATE=0.0021;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104923296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6796;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104923344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7384;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104923362 . T TCTC 2056 PASS INDEL;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0138;AVGPOST=0.9973;RSQ=0.9321;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104923429 . T TC 635 PASS INDEL;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0115;AVGPOST=0.9971;RSQ=0.9200;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104923431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8524;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1862;AN=2184 GT:DS:GL:BD 0.85256410 1
1 104923522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104923537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8753;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104923735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104923754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104923804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104923855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104923885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1004;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 104923894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9007;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104923943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.530;LDAF=0.0155;AVGPOST=0.9803;RSQ=0.5053;ERATE=0.0059;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104923981 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1015;AVGPOST=0.9960;RSQ=0.9834;ERATE=0.0005;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 104924024 . TG T 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104924058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8413;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104924060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1133;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 104924061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8032;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104924090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104924098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104924235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104924352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104924466 . A AC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.4763;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104924480 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0094;AVGPOST=0.9979;RSQ=0.9355;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104924496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104924529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104924555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0808;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 104924556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104925112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104925189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4176;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0005;THETA=0.0011;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 104925238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104925290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104925323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104925341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104925373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8524;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1862;AN=2184 GT:DS:GL:BD 0.85256410 1
1 104925382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9514;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104925455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7056;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104925545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104925551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104925568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104925581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7018;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104925616 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104925717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104925791 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8416;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104925946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9963;RSQ=0.4496;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104925972 . CA C 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6398;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104926008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104926156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1350;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 104926210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8688;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104926213 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9556;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104926257 . GT G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4315;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104926300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104926329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8526;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1862;AN=2184 GT:DS:GL:BD 0.85256410 1
1 104926360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9162;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104926370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7179;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 104926385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2092;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 104926442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6311;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104926459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8948;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104926470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0133;AVGPOST=0.9990;RSQ=0.9659;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104926486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7261;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104926687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104926688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9425;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104926738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9489;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104926785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0124;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104926808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.848;LDAF=0.1128;AVGPOST=0.9665;RSQ=0.8849;ERATE=0.0009;THETA=0.0002;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 104926931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6463;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104926939 . CTG C 501 PASS INDEL;BAVGPOST=0.978;BRSQ=0.716;LDAF=0.0672;AVGPOST=0.9351;RSQ=0.5655;ERATE=0.0320;THETA=0.0001;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104927027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0561;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 104927130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5660;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104927344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7592;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104927414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0383;AVGPOST=0.9989;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 104927419 . GA G 635 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0112;AVGPOST=0.9972;RSQ=0.8944;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104927423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104927429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8518;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 104927433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7742;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104927463 rs76573140 T TC 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6483;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104927472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0033;AVGPOST=0.9958;RSQ=0.6127;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104927607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104927670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104927702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9066;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104927758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0334;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104927831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104927901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8193;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104928374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0205;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104928432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104928440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7093;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104928574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0317;AVGPOST=0.9952;RSQ=0.9418;ERATE=0.0005;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104928733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5666;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104928771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9130;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104928858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104928887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104928896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9646;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104929168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7267;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104929198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104929251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9273;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104929436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4770;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104929483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5940;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104929557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104929769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0463;AVGPOST=0.9975;RSQ=0.9821;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 104929896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8800;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104929987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6044;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104930006 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7160;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104930070 rs11387123 T TA 295 PASS INDEL;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9539;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104930070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104930217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1992;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 104930296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.918;LDAF=0.0255;AVGPOST=0.9943;RSQ=0.9180;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 104930322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104930371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8299;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104930548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7710;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104930550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104930593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104930628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8735;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104930636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9036;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104930661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104930695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9068;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104930719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104930724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7549;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104930725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1698;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104930813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5863;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104930877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3502;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 104930882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104931082 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104931179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8822;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104931247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0286;AVGPOST=0.9933;RSQ=0.9204;ERATE=0.0007;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104931456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.768;LDAF=0.0264;AVGPOST=0.9912;RSQ=0.8676;ERATE=0.0007;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104931461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104931486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0051;AVGPOST=0.9967;RSQ=0.7483;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104931619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5599;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104931661 . TAAATC T 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104931687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104931721 . CT C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3946;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104931820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0064;AVGPOST=0.9972;RSQ=0.8376;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104931838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1994;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0008;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 104931844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104932001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8961;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104932149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0336;AVGPOST=0.9988;RSQ=0.9833;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104932208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8943;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104932315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104932428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104932437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9218;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104932464 . CACAT C 2203 PASS INDEL;BAVGPOST=0.976;BRSQ=0.867;LDAF=0.1080;AVGPOST=0.9599;RSQ=0.8406;ERATE=0.0132;THETA=0.0006;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 104932584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104932599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6376;ERATE=0.0011;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104932793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104932796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104932806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5938;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104932823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0546;AVGPOST=0.9941;RSQ=0.9602;ERATE=0.0004;THETA=0.0011;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104932857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104933001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0329;AVGPOST=0.9980;RSQ=0.9751;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 104933264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104933315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8332;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104933322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1183;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 104933501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104933581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1032;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 104933636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1193;AVGPOST=0.9985;RSQ=0.9941;ERATE=0.0007;THETA=0.0016;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 104933756 . T TG 2014 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1189;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 104933800 . G GA 14444 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1193;AVGPOST=0.9981;RSQ=0.9923;ERATE=0.0005;THETA=0.0009;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 104933803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6765;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104933936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1189;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 104933971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104934030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8528;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104934067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1187;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0017;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 104934100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104934233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104934394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104934476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104934544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1179;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0011;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104934587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104934618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104934778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104934830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104934862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8130;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104934864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1180;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0014;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104934926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104935079 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1181;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104935196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104935256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9213;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104935284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104935334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1179;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104935343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1180;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0009;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104935375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104935421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104935458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104935552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9973;RSQ=0.9850;ERATE=0.0005;THETA=0.0008;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 104935605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104935689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1179;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0003;THETA=0.0013;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 104935784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104935786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0215;AVGPOST=0.9963;RSQ=0.9370;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104935954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104936198 . GA G 2332 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0142;AVGPOST=0.9993;RSQ=0.9775;ERATE=0.0004;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104936216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104936459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9723;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104936521 . AG A 1203 PASS INDEL;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0077;AVGPOST=0.9964;RSQ=0.8042;ERATE=0.0009;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104936526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104936562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104936646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0075;AVGPOST=0.9984;RSQ=0.9126;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104936661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104936688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104936705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7786;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104936735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0179;AVGPOST=0.9990;RSQ=0.9778;ERATE=0.0004;THETA=0.0045;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104936794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0158;AVGPOST=0.9946;RSQ=0.8749;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104936932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0177;AVGPOST=0.9987;RSQ=0.9740;ERATE=0.0003;THETA=0.0015;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104936933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7435;ERATE=0.0007;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104937022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0655;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0017;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 104937029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9332;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104937100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104937116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104937208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8209;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104937246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7235;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104937265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8982;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104937279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104937365 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4574;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104937387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2757;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 104937442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104937508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104937525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104937580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104937657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8012;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104937667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104937783 . C CTGAT 17199 PASS INDEL;BAVGPOST=0.942;BRSQ=0.809;LDAF=0.1916;AVGPOST=0.9106;RSQ=0.7734;ERATE=0.0423;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 104937812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.821;LDAF=0.0531;AVGPOST=0.9728;RSQ=0.7800;ERATE=0.0142;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 104937830 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.907;LDAF=0.0316;AVGPOST=0.9889;RSQ=0.8559;ERATE=0.0068;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 104937834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.619;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8158;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104937842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0125;AVGPOST=0.9968;RSQ=0.8928;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104937901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104937914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2760;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 104937932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104938015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104938030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7866;ERATE=0.0003;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104938212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9619;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104938277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104938416 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104938530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104938610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104938613 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104938643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8957;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104938832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104938835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6521;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104938874 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2717;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 104938881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0190;AVGPOST=0.9988;RSQ=0.9739;ERATE=0.0003;THETA=0.0016;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104939010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104939072 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1867;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 104939075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9554;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104939078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.1848;AVGPOST=0.9952;RSQ=0.9893;ERATE=0.0007;THETA=0.0002;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 104939136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.1837;AVGPOST=0.9946;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 104939137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8135;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104939142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1867;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 104939253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.1223;AVGPOST=0.9927;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 104939286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104939312 rs79648827 GC G 19058 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1858;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0004;THETA=0.0033;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 104939345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9987;RSQ=0.9713;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104939385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104939466 . ACCTT A 77 PASS INDEL;BAVGPOST=0.996;BRSQ=0.666;LDAF=0.0125;AVGPOST=0.9883;RSQ=0.6176;ERATE=0.0023;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104939561 . T TTTCC 13851 PASS INDEL;BAVGPOST=0.972;BRSQ=0.918;LDAF=0.1887;AVGPOST=0.9644;RSQ=0.9193;ERATE=0.0063;THETA=0.0004;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 104939587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.460;LDAF=0.0046;AVGPOST=0.9940;RSQ=0.5657;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104939631 . CCCTT C 15101 PASS INDEL;BAVGPOST=0.973;BRSQ=0.921;LDAF=0.1820;AVGPOST=0.9716;RSQ=0.9322;ERATE=0.0042;THETA=0.0004;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 104939701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8786;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104939732 . TCTCCCTCC T 2076 PASS INDEL;BAVGPOST=0.985;BRSQ=0.761;LDAF=0.0335;AVGPOST=0.9746;RSQ=0.7202;ERATE=0.0010;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104939820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0205;AVGPOST=0.9957;RSQ=0.9189;ERATE=0.0005;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104939823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7417;ERATE=0.0018;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104939833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.6300;AVGPOST=0.9771;RSQ=0.9704;ERATE=0.0037;THETA=0.0002;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 104939962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.1891;AVGPOST=0.9898;RSQ=0.9771;ERATE=0.0012;THETA=0.0009;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 104939972 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1882;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 104940025 . G GC 55 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0116;AVGPOST=0.9839;RSQ=0.4420;ERATE=0.0015;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104940068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0162;AVGPOST=0.9954;RSQ=0.8979;ERATE=0.0006;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104940119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5297;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104940130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8475;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 104940344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0214;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104940368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7972;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104940586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6504;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104940629 . CA C 433 PASS INDEL;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7523;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104940652 rs57524257 AC A 1434 PASS INDEL;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0151;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104940667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1859;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0004;THETA=0.0063;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 104940783 . GGCCTATAGTCCCA G 5705 PASS INDEL;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0201;AVGPOST=0.9977;RSQ=0.9466;ERATE=0.0005;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104940837 . C CA 161 PASS INDEL;BAVGPOST=0.995;BRSQ=0.754;LDAF=0.0148;AVGPOST=0.9935;RSQ=0.8197;ERATE=0.0011;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104940839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9977;RSQ=0.3870;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104940865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9050;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104940945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8163;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104940949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4423;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104940950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104940963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7516;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104941072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0066;AVGPOST=0.9977;RSQ=0.8797;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104941103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104941193 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8687;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104941203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8570;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104941237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0160;AVGPOST=0.9982;RSQ=0.9516;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104941344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9254;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104941385 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104941386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0218;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 104941478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5629;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104941704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104941710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5565;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104941795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.6084;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104941914 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8494;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104942003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104942008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104942039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9061;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104942071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5423;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104942086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9048;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104942118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0136;AVGPOST=0.9959;RSQ=0.8901;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104942242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.430;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4069;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104942341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6637;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104942376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.717;BRSQ=0.389;LDAF=0.4043;AVGPOST=0.7449;RSQ=0.4478;ERATE=0.0992;THETA=0.0036;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 104942526 . AG A 72 PASS INDEL;BAVGPOST=0.923;BRSQ=0.353;LDAF=0.1019;AVGPOST=0.8644;RSQ=0.4139;ERATE=0.0140;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 104942562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.9211;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104942638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.953;LDAF=0.0728;AVGPOST=0.9915;RSQ=0.9491;ERATE=0.0007;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 104942639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3835;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104942735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7478;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104942852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104942983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104943031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7946;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104943391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104943514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8460;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104943582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104943790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9833;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104943809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8807;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104943879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1271;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 104943890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1270;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0011;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 104944150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9051;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104944286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4193;AVGPOST=0.9915;RSQ=0.9879;ERATE=0.0005;THETA=0.0008;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 104944316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104944383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0120;AVGPOST=0.9977;RSQ=0.9192;ERATE=0.0005;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104944401 . AC A 355 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104944412 . GGTTA G 167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104944551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6380;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104944570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104944611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6584;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104944619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104944692 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104944698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104944709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0329;AVGPOST=0.9992;RSQ=0.9907;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 104944710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104944812 . C CT 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104944886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9138;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104944998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104945001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1282;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 104945088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9088;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 104945134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7114;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104945293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8472;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104945323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104945462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104945489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104945594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104945723 rs112119693 C CT 18304 PASS INDEL;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1278;AVGPOST=0.9977;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 104945731 . T TA 2490 PASS INDEL;BAVGPOST=0.988;BRSQ=0.952;LDAF=0.1278;AVGPOST=0.9969;RSQ=0.9885;ERATE=0.0004;THETA=0.0003;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 104945733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104945745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104945760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104945779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8578;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104945798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104945822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104945823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104945830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9646;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104946136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9986;RSQ=0.9877;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 104946175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104946370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6840;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104946391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0213;AVGPOST=0.9989;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104946482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104946620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9048;AVGPOST=0.9983;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=1976;AN=2184 GT:DS:GL:BD 0.90476191 1
1 104946633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104946683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1271;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 104946684 . G GA 37 PASS INDEL;BAVGPOST=0.990;BRSQ=0.520;LDAF=0.0172;AVGPOST=0.9782;RSQ=0.5168;ERATE=0.0062;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104946689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104946820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6886;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104947074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0070;AVGPOST=0.9985;RSQ=0.9283;ERATE=0.0003;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104947085 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104947122 . CTT C 467 PASS INDEL;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0042;AVGPOST=0.9966;RSQ=0.6521;ERATE=0.0006;THETA=0.0176;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104947242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104947244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.689;LDAF=0.0278;AVGPOST=0.9777;RSQ=0.6560;ERATE=0.0082;THETA=0.0376;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104947256 . CT C 200 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5990;ERATE=0.0006;THETA=0.0174;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104947267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.800;LDAF=0.2208;AVGPOST=0.9255;RSQ=0.8471;ERATE=0.0122;THETA=0.0183;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 104947287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0049;AVGPOST=0.9948;RSQ=0.6086;ERATE=0.0007;THETA=0.0202;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104947335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.846;BRSQ=0.716;LDAF=0.6406;AVGPOST=0.8264;RSQ=0.7255;ERATE=0.0296;THETA=0.0137;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 104947372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.834;LDAF=0.0415;AVGPOST=0.9824;RSQ=0.8488;ERATE=0.0004;THETA=0.0062;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104947410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.830;LDAF=0.0431;AVGPOST=0.9814;RSQ=0.8503;ERATE=0.0006;THETA=0.0047;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 104947411 . A AT 945 PASS INDEL;BAVGPOST=0.982;BRSQ=0.831;LDAF=0.0441;AVGPOST=0.9823;RSQ=0.8528;ERATE=0.0005;THETA=0.0149;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 104947414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.820;LDAF=0.0531;AVGPOST=0.9737;RSQ=0.8119;ERATE=0.0011;THETA=0.0146;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 104947417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0445;AVGPOST=0.9980;RSQ=0.9807;ERATE=0.0003;THETA=0.0178;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104947445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.850;LDAF=0.0726;AVGPOST=0.9808;RSQ=0.8939;ERATE=0.0020;THETA=0.0078;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 104947464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0443;AVGPOST=0.9975;RSQ=0.9759;ERATE=0.0005;THETA=0.0056;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104947479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7849;ERATE=0.0003;THETA=0.0141;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104947491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0462;AVGPOST=0.9976;RSQ=0.9791;ERATE=0.0006;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 104947538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0073;AVGPOST=0.9959;RSQ=0.7713;ERATE=0.0027;THETA=0.0130;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104947613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8628;ERATE=0.0003;THETA=0.0093;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104947614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0005;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104947623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104947671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104947692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104947726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.867;LDAF=0.0201;AVGPOST=0.9946;RSQ=0.8985;ERATE=0.0005;THETA=0.0121;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104947781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104947832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.886;LDAF=0.0286;AVGPOST=0.9908;RSQ=0.8809;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104947833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.8759;ERATE=0.0007;THETA=0.0078;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104947836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0064;AVGPOST=0.9980;RSQ=0.8743;ERATE=0.0004;THETA=0.0134;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104947853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0002;THETA=0.0048;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104947989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0113;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104948035 rs56168052 T TTTTTG 1407 PASS INDEL;BAVGPOST=0.984;BRSQ=0.813;LDAF=0.0423;AVGPOST=0.9894;RSQ=0.8999;ERATE=0.0007;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 104948111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.380;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5879;ERATE=0.0005;THETA=0.0110;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104948159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.858;LDAF=0.0432;AVGPOST=0.9899;RSQ=0.9084;ERATE=0.0005;THETA=0.0093;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104948169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.916;LDAF=0.3822;AVGPOST=0.9092;RSQ=0.8617;ERATE=0.0033;THETA=0.0035;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 104948179 . AAT A 10604 PASS INDEL;BAVGPOST=0.694;BRSQ=0.430;LDAF=0.6348;AVGPOST=0.7063;RSQ=0.5098;ERATE=0.0147;THETA=0.0106;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 104948285 rs71941697 A AT 1402 PASS INDEL;BAVGPOST=0.677;BRSQ=0.327;LDAF=0.3250;AVGPOST=0.7135;RSQ=0.4811;ERATE=0.0165;THETA=0.0032;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 104948288 rs71941697 TA T 19894 PASS INDEL;BAVGPOST=0.859;BRSQ=0.623;LDAF=0.8485;AVGPOST=0.8969;RSQ=0.7213;ERATE=0.0010;THETA=0.0014;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 104948289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.777;BRSQ=0.491;LDAF=0.7138;AVGPOST=0.7792;RSQ=0.5539;ERATE=0.0266;THETA=0.0093;AC=1681;AN=2184 GT:DS:GL:BD 0.76968867 1
1 104948290 rs71941697 T TA 400 PASS INDEL;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0145;AVGPOST=0.9915;RSQ=0.7695;ERATE=0.0005;THETA=0.0029;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104948291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3075;ERATE=0.0007;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104948421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104948423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7973;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104948439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7075;ERATE=0.0003;THETA=0.0115;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104948485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104948494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104948573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7697;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104948596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104948659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.909;LDAF=0.3847;AVGPOST=0.9399;RSQ=0.9009;ERATE=0.0088;THETA=0.0006;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 104948807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.710;LDAF=0.0075;AVGPOST=0.9930;RSQ=0.6410;ERATE=0.0005;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104948827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104948898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0483;AVGPOST=0.9992;RSQ=0.9928;ERATE=0.0003;THETA=0.0092;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104948922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0136;AVGPOST=0.9981;RSQ=0.9479;ERATE=0.0002;THETA=0.0018;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104948947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0486;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0082;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104948954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0486;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 104949038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104949056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0485;AVGPOST=0.9989;RSQ=0.9912;ERATE=0.0003;THETA=0.0016;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 104949067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5061;AVGPOST=0.9883;RSQ=0.9810;ERATE=0.0004;THETA=0.0021;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 104949208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0124;AVGPOST=0.9969;RSQ=0.9076;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104949263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3959;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104949288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104949299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7660;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104949373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0486;AVGPOST=0.9987;RSQ=0.9873;ERATE=0.0005;THETA=0.0008;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 104949439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.538;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6879;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104949491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.872;LDAF=0.0499;AVGPOST=0.9965;RSQ=0.9699;ERATE=0.0005;THETA=0.0014;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104949520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0049;AVGPOST=0.9956;RSQ=0.6169;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104949558 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104949609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.928;LDAF=0.0535;AVGPOST=0.9946;RSQ=0.9665;ERATE=0.0005;THETA=0.0009;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 104949612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9989;RSQ=0.9821;ERATE=0.0003;THETA=0.0024;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104949653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104949733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.635;LDAF=0.0059;AVGPOST=0.9939;RSQ=0.6106;ERATE=0.0010;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104949742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7399;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104949746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0477;AVGPOST=0.9957;RSQ=0.9657;ERATE=0.0003;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 104949757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.927;LDAF=0.0484;AVGPOST=0.9962;RSQ=0.9698;ERATE=0.0004;THETA=0.0014;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104949763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0002;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104949803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0613;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0004;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 104949813 rs74259863 CAAAT C 7922 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0640;AVGPOST=0.9952;RSQ=0.9735;ERATE=0.0007;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 104949882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8126;ERATE=0.0005;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104949992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.829;LDAF=0.0419;AVGPOST=0.9915;RSQ=0.9213;ERATE=0.0005;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 104949993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.728;LDAF=0.0406;AVGPOST=0.9906;RSQ=0.9143;ERATE=0.0003;THETA=0.0011;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104950019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.710;LDAF=0.0398;AVGPOST=0.9887;RSQ=0.8964;ERATE=0.0005;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 104950038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.901;LDAF=0.0636;AVGPOST=0.9899;RSQ=0.9360;ERATE=0.0004;THETA=0.0009;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 104950081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9321;ERATE=0.0005;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104950122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.625;LDAF=0.0063;AVGPOST=0.9922;RSQ=0.5099;ERATE=0.0008;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104950215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6502;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104950289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0041;AVGPOST=0.9959;RSQ=0.6064;ERATE=0.0015;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104950300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5501;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104950304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.951;LDAF=0.0750;AVGPOST=0.9967;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 104950339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8980;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104950342 rs55952500 GA G 1885 PASS INDEL;BAVGPOST=0.988;BRSQ=0.914;LDAF=0.0762;AVGPOST=0.9934;RSQ=0.9636;ERATE=0.0004;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 104950346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104950347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0114;AVGPOST=0.9982;RSQ=0.9365;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104950357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7674;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104950435 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7331;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104950583 rs11451747 T TG 96739 PASS INDEL;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.8282;AVGPOST=0.9935;RSQ=0.9833;ERATE=0.0009;THETA=0.0007;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 104950609 . G GA 33082 PASS INDEL;BAVGPOST=0.976;BRSQ=0.933;LDAF=0.8001;AVGPOST=0.9556;RSQ=0.9033;ERATE=0.0120;THETA=0.0004;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 104950610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8282;AVGPOST=0.9954;RSQ=0.9886;ERATE=0.0006;THETA=0.0003;AC=1809;AN=2184 GT:DS:GL:BD 0.82829672 1
1 104950662 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0758;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0002;THETA=0.0045;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 104950665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104950737 . A AG 4676 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0633;AVGPOST=0.9958;RSQ=0.9766;ERATE=0.0003;THETA=0.0013;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 104950799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0635;AVGPOST=0.9978;RSQ=0.9885;ERATE=0.0002;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 104950800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8288;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=1810;AN=2184 GT:DS:GL:BD 0.82875460 1
1 104950803 . C CA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4975;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104950848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104950914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104950962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7574;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104950972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9693;ERATE=0.0002;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104951221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104951226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7666;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104951231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.1009;AVGPOST=0.9880;RSQ=0.9501;ERATE=0.0045;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 104951256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0035;AVGPOST=0.9959;RSQ=0.4843;ERATE=0.0011;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104951325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0102;AVGPOST=0.9990;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104951458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0754;AVGPOST=0.9981;RSQ=0.9903;ERATE=0.0004;THETA=0.0006;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 104951460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104951474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104951490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104951609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0759;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 104951627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0760;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0002;THETA=0.0007;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 104951636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104951652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0775;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 104951664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104951782 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0274;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104951787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1088;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 104951902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8504;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104951958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7560;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104952040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6934;ERATE=0.0003;THETA=0.0128;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104952179 . ATATTT A 126 PASS INDEL;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5829;ERATE=0.0004;THETA=0.0337;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104952242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.901;LDAF=0.0162;AVGPOST=0.9951;RSQ=0.8918;ERATE=0.0005;THETA=0.0117;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104952304 . CCT C 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.2603;ERATE=0.0005;THETA=0.0213;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104952493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0346;AVGPOST=0.9782;RSQ=0.7455;ERATE=0.0006;THETA=0.0153;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104952557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.788;LDAF=0.9770;AVGPOST=0.9750;RSQ=0.5894;ERATE=0.0007;THETA=0.0125;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 104952603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.635;LDAF=0.0511;AVGPOST=0.9528;RSQ=0.6207;ERATE=0.0020;THETA=0.0079;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 104952611 . ACCCCGCCCCCCCGC A 1189 PASS INDEL;BAVGPOST=0.947;BRSQ=0.185;LDAF=0.0473;AVGPOST=0.9298;RSQ=0.3698;ERATE=0.0019;THETA=0.0133;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104952624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0143;AVGPOST=0.9886;RSQ=0.7199;ERATE=0.0008;THETA=0.0155;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104952820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.482;LDAF=0.0050;AVGPOST=0.9926;RSQ=0.3916;ERATE=0.0006;THETA=0.0200;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104952842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.726;LDAF=0.0072;AVGPOST=0.9952;RSQ=0.7280;ERATE=0.0010;THETA=0.0403;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104952906 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0346;AVGPOST=0.9927;RSQ=0.9116;ERATE=0.0007;THETA=0.0213;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104952960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.2403;AVGPOST=0.9744;RSQ=0.9532;ERATE=0.0006;THETA=0.0095;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 104952983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104953011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1985;AVGPOST=0.9881;RSQ=0.9727;ERATE=0.0007;THETA=0.0011;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 104953213 . AACAC A 2368 PASS INDEL;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0189;AVGPOST=0.9979;RSQ=0.9515;ERATE=0.0003;THETA=0.0024;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104953389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104953398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0493;AVGPOST=0.9963;RSQ=0.9708;ERATE=0.0004;THETA=0.0014;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 104953419 rs71841403 ATATTT A 12477 PASS INDEL;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.2029;AVGPOST=0.9765;RSQ=0.9463;ERATE=0.0016;THETA=0.0049;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 104953472 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.495;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2434;ERATE=0.0010;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104953640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.2371;AVGPOST=0.9866;RSQ=0.9749;ERATE=0.0005;THETA=0.0008;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 104953734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0081;AVGPOST=0.9973;RSQ=0.8492;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104953743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3375;AVGPOST=0.9854;RSQ=0.9760;ERATE=0.0027;THETA=0.0012;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 104953918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104953986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104954017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2314;AVGPOST=0.9942;RSQ=0.9899;ERATE=0.0003;THETA=0.0012;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 104954058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104954059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6440;AVGPOST=0.9912;RSQ=0.9861;ERATE=0.0005;THETA=0.0003;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 104954067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0345;AVGPOST=0.9973;RSQ=0.9699;ERATE=0.0004;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104954175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104954304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0504;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 104954351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104954384 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104954514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5699;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104954529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0240;AVGPOST=0.9948;RSQ=0.9156;ERATE=0.0007;THETA=0.0024;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 104954537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104954611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7551;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104954680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5971;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104954694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104954714 . CA C 448 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7494;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104954869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104954873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0437;AVGPOST=0.9987;RSQ=0.9875;ERATE=0.0004;THETA=0.0009;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 104954944 . ATGGTGG A 5084 PASS INDEL;BAVGPOST=0.992;BRSQ=0.884;LDAF=0.0407;AVGPOST=0.9970;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104954955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0423;AVGPOST=0.9989;RSQ=0.9884;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 104955015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=0.9991;RSQ=0.9910;ERATE=0.0003;THETA=0.0030;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104955083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0363;AVGPOST=0.9964;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104955108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0064;AVGPOST=0.9910;RSQ=0.3959;ERATE=0.0032;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104955126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7176;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104955155 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104955163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104955191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104955253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104955257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104955269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104955409 . CGAT C 72 PASS INDEL;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6840;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104955436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2338;AVGPOST=0.9976;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 104955476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8540;ERATE=0.0013;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104955515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9289;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104955677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104955705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2899;AVGPOST=0.9908;RSQ=0.9853;ERATE=0.0018;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 104955857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.510;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104955987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104956106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104956209 . AG A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4115;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104956268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104956297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104956332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1811;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0004;THETA=0.0014;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 104956345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0327;AVGPOST=0.9992;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 104956352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 104956517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6439;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 104956527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104956584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5081;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104956716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 104956934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0275;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0031;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104957115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104957159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4721;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 104957167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104957171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104957174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104957235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1868;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 104957268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104957476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104957479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5249;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 104957537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6615;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104957563 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6557;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104957727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6808;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104957752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104957860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7772;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104957941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104958002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104958080 . CTCCCCAAA C 630 PASS INDEL;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7310;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104958148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104958163 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104958290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8827;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104958534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9408;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104958587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104958597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0175;AVGPOST=0.9987;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104958643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0498;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 104958655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6317;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104958883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7010;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104958954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7729;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104959050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1870;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0004;THETA=0.0009;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 104959060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8982;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104959147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104959181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104959312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5891;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104959317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8698;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104959462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104959478 . A AT 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0051;AVGPOST=0.9951;RSQ=0.6079;ERATE=0.0008;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104959524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104959574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104959611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0139;AVGPOST=0.9994;RSQ=0.9827;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104959715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9125;ERATE=0.0003;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104959744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104959866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9783;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104959963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104960070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104960182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4443;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0006;THETA=0.0003;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 104960215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104960216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104960237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104960341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104960396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7567;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104960415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104960466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6643;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104960469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104960567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8119;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104960583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9117;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104960606 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104960810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9377;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104960836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9630;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104960914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1867;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 104961063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0002;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 104961256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5723;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104961298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0205;AVGPOST=0.9991;RSQ=0.9860;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104961306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104961322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104961410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0512;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 104961585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0439;AVGPOST=0.9988;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104961812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104961912 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4470;AVGPOST=0.9945;RSQ=0.9927;ERATE=0.0007;THETA=0.0005;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 104962034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9056;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104962054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9457;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104962077 . G GC 343 PASS INDEL;BAVGPOST=0.988;BRSQ=0.369;LDAF=0.0249;AVGPOST=0.9817;RSQ=0.7085;ERATE=0.0012;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104962153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2234;AVGPOST=0.9771;RSQ=0.9526;ERATE=0.0008;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 104962154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2203;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 104962312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9351;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104962528 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6148;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0034;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 104962654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104962734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104962782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104962857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104962861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104962953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9767;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 104963007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104963259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104963267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0029;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104963376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9756;ERATE=0.0003;THETA=0.0058;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104963450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0343;AVGPOST=0.9942;RSQ=0.9304;ERATE=0.0007;THETA=0.0055;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104963534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6637;ERATE=0.0004;THETA=0.0114;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104963584 rs113912596 C CA 936 PASS INDEL;BAVGPOST=0.505;BRSQ=0.127;LDAF=0.4438;AVGPOST=0.6087;RSQ=0.3075;ERATE=0.0383;THETA=0.0081;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 104963628 . AT A 34 PASS INDEL;BAVGPOST=0.996;BRSQ=0.512;LDAF=0.0052;AVGPOST=0.9945;RSQ=0.5617;ERATE=0.0013;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104963667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104963879 rs35906582 GC G 24780 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2274;AVGPOST=0.9952;RSQ=0.9881;ERATE=0.0005;THETA=0.0042;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 104964038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8742;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104964166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7816;ERATE=0.0004;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104964188 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0024;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104964209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7716;AVGPOST=0.9950;RSQ=0.9894;ERATE=0.0006;THETA=0.0014;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 104964227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8957;ERATE=0.0003;THETA=0.0098;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104964390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5067;AVGPOST=0.9935;RSQ=0.9901;ERATE=0.0006;THETA=0.0003;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 104964454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2323;AVGPOST=0.9888;RSQ=0.9764;ERATE=0.0008;THETA=0.0058;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 104964534 . GTGA G 9919 PASS INDEL;BAVGPOST=0.932;BRSQ=0.886;LDAF=0.4413;AVGPOST=0.9344;RSQ=0.9064;ERATE=0.0055;THETA=0.0005;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 104964590 rs61516978 TGAG T 45841 PASS INDEL;BAVGPOST=0.942;BRSQ=0.910;LDAF=0.4761;AVGPOST=0.9641;RSQ=0.9533;ERATE=0.0005;THETA=0.0004;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 104964591 . GAGT G 16558 PASS INDEL;BAVGPOST=0.942;BRSQ=0.909;LDAF=0.4615;AVGPOST=0.9497;RSQ=0.9341;ERATE=0.0013;THETA=0.0051;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 104964595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5510;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104964607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.447;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5620;ERATE=0.0006;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104964788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.0560;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 104964810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8691;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104964812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.911;LDAF=0.0208;AVGPOST=0.9977;RSQ=0.9541;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 104964825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.5411;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104964847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2333;AVGPOST=0.9917;RSQ=0.9826;ERATE=0.0008;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 104964905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8223;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104965054 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.9046;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104965065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104965074 . C CT 1183 PASS INDEL;BAVGPOST=0.966;BRSQ=0.584;LDAF=0.0670;AVGPOST=0.9204;RSQ=0.4913;ERATE=0.0227;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 104965158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2235;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0004;THETA=0.0009;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 104965271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6610;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104965288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104965311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8727;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104965339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7403;ERATE=0.0015;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104965434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104965475 . GT G 579 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7230;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104965545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9477;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104965554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7197;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104965555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8401;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104965595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8576;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104965618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104965629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7603;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104965682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104965709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9357;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104965736 rs34877717 CG C 1049 PASS INDEL;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0133;AVGPOST=0.9954;RSQ=0.8721;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104965753 . GT G 21 PASS INDEL;BAVGPOST=0.987;BRSQ=0.656;LDAF=0.0411;AVGPOST=0.9609;RSQ=0.6130;ERATE=0.0015;THETA=0.0016;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 104965755 . GC G 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104965810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104965921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104965922 . CA C 256 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8622;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104965924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8529;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104965951 . T TC 378 PASS INDEL;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0047;AVGPOST=0.9964;RSQ=0.7037;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104966061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6479;AVGPOST=0.9962;RSQ=0.9933;ERATE=0.0004;THETA=0.0014;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 104966089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9223;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104966090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104966097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0157;AVGPOST=0.9982;RSQ=0.9509;ERATE=0.0014;THETA=0.0019;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104966197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104966378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104966618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.555;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6456;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104966714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0113;AVGPOST=0.9975;RSQ=0.9029;ERATE=0.0008;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104966738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1299;AVGPOST=0.9923;RSQ=0.9733;ERATE=0.0006;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 104966753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5360;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104966770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0152;AVGPOST=0.9967;RSQ=0.9229;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104966794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0257;AVGPOST=0.9984;RSQ=0.9734;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 104966795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0274;AVGPOST=0.9962;RSQ=0.9481;ERATE=0.0008;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104966806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104966907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0167;AVGPOST=0.9921;RSQ=0.8007;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104966908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9344;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104966950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104967133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104967154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8120;AVGPOST=0.9974;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 104967261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8188;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104967530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0026;AVGPOST=0.9961;RSQ=0.5163;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104967611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9280;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104967645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104967669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8042;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 104967843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0075;AVGPOST=0.9981;RSQ=0.8985;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104967847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104967965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7095;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104968137 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0698;AVGPOST=0.9988;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 104968164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104968302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7756;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104968382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104968524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104968591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7558;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1651;AN=2184 GT:DS:GL:BD 0.75595236 1
1 104968680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8169;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104968807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7576;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 104968823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104968825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104968834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104968840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5081;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104968905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.649;LDAF=0.0093;AVGPOST=0.9917;RSQ=0.6577;ERATE=0.0007;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104968999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7980;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104969080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7503;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104969103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104969169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104969228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0137;AVGPOST=0.9975;RSQ=0.9315;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 104969266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8613;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104969292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1303;AVGPOST=0.9978;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 104969299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104969358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7909;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 104969454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104969488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104969500 . CTT C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7901;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104969524 . G GA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4253;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0444;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104969655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969677 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104969690 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9313;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104969731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8166;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104969746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8671;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104969763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104969770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104969821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4380;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969870 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969975 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104969983 . G GC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104970011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6269;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104970113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104970223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.891;LDAF=0.7188;AVGPOST=0.9030;RSQ=0.8176;ERATE=0.0158;THETA=0.0002;AC=1600;AN=2184 GT:DS:GL:BD 0.73260075 1
1 104970256 . C CA 69 PASS INDEL;BAVGPOST=0.995;BRSQ=0.690;LDAF=0.0115;AVGPOST=0.9865;RSQ=0.5685;ERATE=0.0013;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104970341 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0695;AVGPOST=0.9993;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 104970408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.429;LDAF=0.0049;AVGPOST=0.9937;RSQ=0.5033;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104970554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9227;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104970631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5349;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104970657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5610;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104970705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.823;LDAF=0.0077;AVGPOST=0.9961;RSQ=0.7867;ERATE=0.0013;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104970763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6949;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104970794 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2294;AVGPOST=0.9953;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 104970807 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9155;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104970832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104970865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 104971170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.964;LDAF=0.9059;AVGPOST=0.9932;RSQ=0.9702;ERATE=0.0004;THETA=0.0002;AC=1982;AN=2184 GT:DS:GL:BD 0.90750915 1
1 104971229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9972;RSQ=0.3162;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104971404 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9003;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104971412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104971482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0197;AVGPOST=0.9982;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104971589 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.7098;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104971601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104971658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104971674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104971684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9360;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104971769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8063;AVGPOST=0.9973;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 104971961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5521;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104972003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1294;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 104972009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104972016 . GA G 72 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6533;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104972019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7152;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104972109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104972110 . C CA 1445 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9636;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104972316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9985;RSQ=0.9680;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104972395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104972452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104972553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9071;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104972704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104972875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104972879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8664;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104973231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104973263 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104973301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5310;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104973345 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104973421 . ATTAT A 67 PASS INDEL;BAVGPOST=0.995;BRSQ=0.641;LDAF=0.0156;AVGPOST=0.9826;RSQ=0.5362;ERATE=0.0039;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 104973552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0114;AVGPOST=0.9979;RSQ=0.9331;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104973602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104973615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0358;AVGPOST=0.9941;RSQ=0.9405;ERATE=0.0004;THETA=0.0012;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104973631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104973725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8067;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104973808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9986;RSQ=0.9626;ERATE=0.0004;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104973934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0162;AVGPOST=0.9936;RSQ=0.8718;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 104973959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8319;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104974067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104974089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104974169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104974210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104974258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104974337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0786;AVGPOST=0.9942;RSQ=0.9719;ERATE=0.0004;THETA=0.0009;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 104974375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0099;AVGPOST=0.9977;RSQ=0.9023;ERATE=0.0005;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104974431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104974453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104974454 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104975066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104975151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7308;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104975293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104975375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104975393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9343;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104975504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104975525 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104975593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104975630 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104975650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9528;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104975683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0032;AVGPOST=0.9951;RSQ=0.4371;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104975722 . G GC 348 PASS INDEL;BAVGPOST=0.997;BRSQ=0.705;LDAF=0.0095;AVGPOST=0.9908;RSQ=0.6287;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104975740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0215;AVGPOST=0.9898;RSQ=0.8170;ERATE=0.0009;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 104975768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0155;AVGPOST=0.9967;RSQ=0.9219;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 104975777 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0119;AVGPOST=0.9947;RSQ=0.8204;ERATE=0.0008;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104976113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9965;RSQ=0.9232;ERATE=0.0007;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 104976416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9966;RSQ=0.8534;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104976418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.958;LDAF=0.0661;AVGPOST=0.9926;RSQ=0.9525;ERATE=0.0006;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 104976445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.858;LDAF=0.3117;AVGPOST=0.8293;RSQ=0.7011;ERATE=0.0285;THETA=0.0008;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 104976550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.604;LDAF=0.0151;AVGPOST=0.9896;RSQ=0.7225;ERATE=0.0007;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104976564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.823;LDAF=0.1816;AVGPOST=0.9248;RSQ=0.8077;ERATE=0.0076;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 104976574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.931;LDAF=0.1144;AVGPOST=0.9814;RSQ=0.9259;ERATE=0.0011;THETA=0.0021;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 104976596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.760;LDAF=0.0127;AVGPOST=0.9952;RSQ=0.8440;ERATE=0.0008;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104976597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.444;LDAF=0.0273;AVGPOST=0.9606;RSQ=0.4453;ERATE=0.0028;THETA=0.0016;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 104976674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.848;LDAF=0.0452;AVGPOST=0.9576;RSQ=0.6388;ERATE=0.0028;THETA=0.0011;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 104976711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.495;LDAF=0.0686;AVGPOST=0.9211;RSQ=0.5144;ERATE=0.0075;THETA=0.0018;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 104976825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0294;AVGPOST=0.9733;RSQ=0.6467;ERATE=0.0017;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 104976862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.739;LDAF=0.0331;AVGPOST=0.9756;RSQ=0.6944;ERATE=0.0018;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 104977030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.841;LDAF=0.0898;AVGPOST=0.9485;RSQ=0.7553;ERATE=0.0041;THETA=0.0024;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 104977151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.627;LDAF=0.0122;AVGPOST=0.9880;RSQ=0.6086;ERATE=0.0008;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104977200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.952;LDAF=0.1516;AVGPOST=0.9934;RSQ=0.9772;ERATE=0.0008;THETA=0.0021;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 104977231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0044;AVGPOST=0.9925;RSQ=0.2276;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104977274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.927;LDAF=0.1290;AVGPOST=0.9500;RSQ=0.8513;ERATE=0.0019;THETA=0.0008;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 104977313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104977440 . AC A 23 PASS INDEL;BAVGPOST=0.998;BRSQ=0.559;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104977477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0243;AVGPOST=0.9987;RSQ=0.9766;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104977670 . C CA 68 PASS INDEL;BAVGPOST=0.996;BRSQ=0.645;LDAF=0.0109;AVGPOST=0.9860;RSQ=0.5207;ERATE=0.0032;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104977691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8182;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104977861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9152;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104978000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104978099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7729;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104978138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104978320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104978451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.670;LDAF=0.0226;AVGPOST=0.9811;RSQ=0.6765;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104978476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.603;LDAF=0.0109;AVGPOST=0.9887;RSQ=0.6109;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104978505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0076;AVGPOST=0.9963;RSQ=0.8306;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104978547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4815;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104978651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6269;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104978757 . T TA 5 PASS INDEL;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.6776;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104978795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0281;AVGPOST=0.9981;RSQ=0.9737;ERATE=0.0006;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 104979048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0043;AVGPOST=0.9947;RSQ=0.4744;ERATE=0.0011;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104979093 . T TTTC 759 PASS INDEL;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104979133 . TTTTTC T 77 PASS INDEL;BAVGPOST=0.995;BRSQ=0.453;LDAF=0.0107;AVGPOST=0.9979;RSQ=0.9148;ERATE=0.0005;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104979258 . C CT 120 PASS INDEL;BAVGPOST=0.986;BRSQ=0.434;LDAF=0.0181;AVGPOST=0.9777;RSQ=0.5135;ERATE=0.0019;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 104979283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.574;LDAF=0.0234;AVGPOST=0.9789;RSQ=0.6499;ERATE=0.0041;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104979288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.641;LDAF=0.0124;AVGPOST=0.9867;RSQ=0.5674;ERATE=0.0029;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104979307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.508;LDAF=0.0156;AVGPOST=0.9831;RSQ=0.5591;ERATE=0.0030;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104979308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104979355 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0121;AVGPOST=0.9979;RSQ=0.9317;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104979603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104979848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104980028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104980031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5870;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104980162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0081;AVGPOST=0.9937;RSQ=0.6908;ERATE=0.0010;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104980189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0159;AVGPOST=0.9984;RSQ=0.9528;ERATE=0.0005;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104980192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8507;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104980408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9634;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104980410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9123;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104980468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104980735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 104980957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0243;AVGPOST=0.9978;RSQ=0.9689;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 104981135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104981179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8219;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104981183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5335;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104981190 . T TA 145 PASS INDEL;BAVGPOST=0.992;BRSQ=0.636;LDAF=0.0087;AVGPOST=0.9932;RSQ=0.6797;ERATE=0.0009;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104981236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.534;LDAF=0.0092;AVGPOST=0.9886;RSQ=0.5259;ERATE=0.0017;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104981237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5483;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 104981255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104981304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5529;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104981432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104981546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104981592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0002;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104981657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104981669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104981754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7532;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104981784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104981816 . AAC A 27 PASS INDEL;BAVGPOST=0.993;BRSQ=0.671;LDAF=0.0154;AVGPOST=0.9810;RSQ=0.5338;ERATE=0.0047;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104981905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104981967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104981973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104982004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0274;AVGPOST=0.9956;RSQ=0.9453;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 104982026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104982181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7410;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104982210 . TTC T 865 PASS INDEL;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8333;ERATE=0.0005;THETA=0.0029;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104982273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0002;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104982330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104982331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8593;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104982415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104982422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7273;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104982883 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7195;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104982929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8149;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104982963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104983085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8066;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104983189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8850;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104983231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104983305 . GTGTT G 1216 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0113;AVGPOST=0.9977;RSQ=0.9194;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 104983342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7226;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104983413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104983545 . C CGTCT 314 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6746;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104983660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4555;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104983661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5101;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104983799 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9586;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104983831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5325;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104983863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104983957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8702;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104984020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9350;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104984078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7375;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104984098 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5080;ERATE=0.0006;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104984211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104984328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5662;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104984356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9709;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104984496 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9090;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104984545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3525;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0005;THETA=0.0011;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 104984571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104984673 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3803;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104984694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.491;LDAF=0.0112;AVGPOST=0.9908;RSQ=0.6474;ERATE=0.0009;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104984773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0072;AVGPOST=0.9941;RSQ=0.6827;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 104984947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104985133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0312;AVGPOST=0.9976;RSQ=0.9736;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104985140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104985189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104985232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104985234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 104985309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9250;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104985390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0519;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0016;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 104985410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9450;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104985573 . G GC 312 PASS INDEL;BAVGPOST=0.964;BRSQ=0.342;LDAF=0.0400;AVGPOST=0.9591;RSQ=0.5928;ERATE=0.0023;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 104985684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0108;AVGPOST=0.9972;RSQ=0.8962;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 104985686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.310;LDAF=0.0311;AVGPOST=0.9577;RSQ=0.4588;ERATE=0.0016;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 104985990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.148;LDAF=0.1938;AVGPOST=0.7469;RSQ=0.3410;ERATE=0.0184;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 104986001 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0045;AVGPOST=0.9961;RSQ=0.6940;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104986125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3720;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104986173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7369;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104986182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0050;AVGPOST=0.9947;RSQ=0.6160;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104986189 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9447;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104986207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5784;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104986236 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104986340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9984;RSQ=0.9549;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 104986483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9314;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104986534 . A AT 181 PASS INDEL;BAVGPOST=0.942;BRSQ=0.131;LDAF=0.0076;AVGPOST=0.9943;RSQ=0.6992;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104986608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8681;AVGPOST=0.9976;RSQ=0.9922;ERATE=0.0002;THETA=0.0004;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 104986693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 104986704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0026;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104986755 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8356;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104986772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104986806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0669;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0003;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 104986850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104987056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0164;AVGPOST=0.9994;RSQ=0.9852;ERATE=0.0003;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104987083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104987084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104987241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104987410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5114;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104987453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104987616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9225;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 104987878 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9781;ERATE=0.0003;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 104988111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988239 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104988305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 104988364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104988387 . TTTG T 311 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0034;AVGPOST=0.9956;RSQ=0.4956;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104988424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988660 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3452;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 104988667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988686 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3749;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104988850 . CT C 78 PASS INDEL;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6736;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104988900 . TTTGA T 173 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7586;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104988901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104988953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0263;AVGPOST=0.9992;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104989045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104989107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104989112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104989118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104989126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3748;AVGPOST=0.9905;RSQ=0.9856;ERATE=0.0021;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 104989248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6512;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104989298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104989377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104989461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104989715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 104989837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104989929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 104990091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104990102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9985;RSQ=0.9785;ERATE=0.0005;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 104990259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5320;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104990261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7299;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104990349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104990414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8706;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104990492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104990493 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3461;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 104990547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104990688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104990692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6047;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104990694 . C CCCT 209 PASS INDEL;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6893;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 104990969 . CTTTA C 3758 PASS INDEL;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0233;AVGPOST=0.9935;RSQ=0.8855;ERATE=0.0010;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 104991083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4502;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104991121 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 104991394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104991420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3839;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104991514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104991619 . CAGCA C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.5097;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104991658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0171;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 104991883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104991963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0669;AVGPOST=0.9967;RSQ=0.9806;ERATE=0.0004;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 104992054 rs5774000 TCACAATGAG T 31265 PASS INDEL;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.1730;AVGPOST=0.9942;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 104992068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104992122 . GTA G 49617 PASS INDEL;BAVGPOST=0.964;BRSQ=0.419;LDAF=0.9447;AVGPOST=0.9298;RSQ=0.4787;ERATE=0.0082;THETA=0.0002;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 104992227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104992258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7567;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104992295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104992628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9424;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 104992720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104992809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6879;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104992822 . TGCCTTGG T 152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0034;AVGPOST=0.9958;RSQ=0.5023;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104992934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9417;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 104993065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0040;AVGPOST=0.9935;RSQ=0.3851;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104993070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104993206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104993493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.806;LDAF=0.0122;AVGPOST=0.9950;RSQ=0.8376;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104993763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6151;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104994076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0174;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 104994219 . TAC T 173 PASS INDEL;BAVGPOST=0.982;BRSQ=0.638;LDAF=0.0402;AVGPOST=0.9592;RSQ=0.5950;ERATE=0.0117;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 104994640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6846;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104994666 . C CA 134 PASS INDEL;BAVGPOST=0.979;BRSQ=0.555;LDAF=0.0391;AVGPOST=0.9553;RSQ=0.5364;ERATE=0.0105;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 104994945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5670;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104995111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104995193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0048;AVGPOST=0.9967;RSQ=0.7182;ERATE=0.0008;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104995309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104995423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6837;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104995501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104995539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0002;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 104995541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104995646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104995697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104995810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9462;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 104995820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104995853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5369;AVGPOST=0.9937;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 104995879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9280;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 104995990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104996023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.680;LDAF=0.0265;AVGPOST=0.9755;RSQ=0.6432;ERATE=0.0090;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 104996031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8726;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104996177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104996337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7914;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104996399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5308;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104996489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0250;AVGPOST=0.9967;RSQ=0.9431;ERATE=0.0004;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 104996753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4221;AVGPOST=0.9927;RSQ=0.9889;ERATE=0.0005;THETA=0.0010;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 104996812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6789;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104996881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8335;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104996910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9533;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104996969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9063;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 104997017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0679;AVGPOST=0.9986;RSQ=0.9902;ERATE=0.0003;THETA=0.0011;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 104997123 . G GT 350 PASS INDEL;BAVGPOST=0.953;BRSQ=0.525;LDAF=0.0882;AVGPOST=0.8996;RSQ=0.4909;ERATE=0.0227;THETA=0.0007;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 104997366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5661;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 104997510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0230;AVGPOST=0.9951;RSQ=0.9186;ERATE=0.0003;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 104997646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9698;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 104997655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0179;AVGPOST=0.9994;RSQ=0.9841;ERATE=0.0002;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 104997687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104997758 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6517;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 104998043 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 104998056 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9994;RSQ=0.9741;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 104998201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.756;LDAF=0.0096;AVGPOST=0.9951;RSQ=0.8122;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 104998598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3992;AVGPOST=0.9882;RSQ=0.9817;ERATE=0.0010;THETA=0.0044;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 104998702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9967;RSQ=0.6989;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 104998754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4474;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 104998923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0037;AVGPOST=0.9942;RSQ=0.4347;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 104999137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0404;AVGPOST=0.9911;RSQ=0.9082;ERATE=0.0010;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 104999138 . C CT 628 PASS INDEL;BAVGPOST=0.863;BRSQ=0.287;LDAF=0.1845;AVGPOST=0.7739;RSQ=0.3871;ERATE=0.0245;THETA=0.0010;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 104999504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9161;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 104999654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3789;AVGPOST=0.9939;RSQ=0.9899;ERATE=0.0010;THETA=0.0018;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 105000081 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3883;AVGPOST=0.9840;RSQ=0.9772;ERATE=0.0009;THETA=0.0005;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 105000096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105000362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3790;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0007;THETA=0.0007;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 105000414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8881;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105000462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0250;AVGPOST=0.9973;RSQ=0.9512;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 105000468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2577;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 105000540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0814;AVGPOST=0.9973;RSQ=0.9852;ERATE=0.0006;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 105000564 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.3798;AVGPOST=0.9883;RSQ=0.9822;ERATE=0.0008;THETA=0.0015;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 105000660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8293;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105001044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9243;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105001082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4885;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105001200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105001425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1806;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0007;THETA=0.0015;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 105001496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3796;AVGPOST=0.9939;RSQ=0.9910;ERATE=0.0005;THETA=0.0006;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 105001646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3802;AVGPOST=0.9947;RSQ=0.9917;ERATE=0.0007;THETA=0.0008;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 105001649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105001680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105001781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.580;LDAF=0.0095;AVGPOST=0.9911;RSQ=0.5932;ERATE=0.0011;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105001886 . CG C 180 PASS INDEL;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0192;AVGPOST=0.9840;RSQ=0.6485;ERATE=0.0015;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105001891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6873;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105001951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0812;AVGPOST=0.9935;RSQ=0.9651;ERATE=0.0006;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 105001985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3972;AVGPOST=0.9720;RSQ=0.9613;ERATE=0.0033;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 105001994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7037;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105002136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.702;LDAF=0.0099;AVGPOST=0.9943;RSQ=0.7549;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105002317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5779;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105002322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8358;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105002462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105002463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105002533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7657;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105002633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105002729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105002812 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9664;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105002850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105002855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7693;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105003217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9781;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105003223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105003240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105003385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0176;AVGPOST=0.9981;RSQ=0.9561;ERATE=0.0003;THETA=0.0029;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 105003441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0267;AVGPOST=0.9924;RSQ=0.8959;ERATE=0.0005;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 105003592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3815;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105003596 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.675;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7731;ERATE=0.0006;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105003752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0002;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105003904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0292;AVGPOST=0.9978;RSQ=0.9663;ERATE=0.0004;THETA=0.0013;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 105003911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9765;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105003970 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5041;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105003989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0279;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0002;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 105004039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5868;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105004067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0109;AVGPOST=0.9959;RSQ=0.8546;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105004103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0104;AVGPOST=0.9939;RSQ=0.7760;ERATE=0.0005;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105004216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105004251 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8982;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105004377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105004427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105004645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105004675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8952;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105004689 rs71578074 T TGTCAAA 7323 PASS INDEL;BAVGPOST=0.989;BRSQ=0.876;LDAF=0.0410;AVGPOST=0.9972;RSQ=0.9731;ERATE=0.0005;THETA=0.0010;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 105005048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9991;RSQ=0.9853;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 105005051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6820;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105005093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105005256 . A AC 153 PASS INDEL;BAVGPOST=0.997;BRSQ=0.732;LDAF=0.0076;AVGPOST=0.9957;RSQ=0.7746;ERATE=0.0007;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105005276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7371;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105005280 . A AAAC 741 PASS INDEL;BAVGPOST=0.939;BRSQ=0.350;LDAF=0.0665;AVGPOST=0.9486;RSQ=0.6967;ERATE=0.0026;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 105005283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9612;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105005370 . A ATTTTTC 242 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3883;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105005375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8018;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105005510 . TCTC T 2154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105005530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105005632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0002;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 105005662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105005676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105005719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 105005785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105005790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105005803 . GA G 814 PASS INDEL;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8690;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105005805 . GA G 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3872;ERATE=0.0006;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105005980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8013;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105006073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7289;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105006076 . ATATATATGTATGTATG A 2896 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0340;AVGPOST=0.9929;RSQ=0.9065;ERATE=0.0010;THETA=0.0025;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 105006092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.705;LDAF=0.0377;AVGPOST=0.9681;RSQ=0.6604;ERATE=0.0048;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 105006096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.607;LDAF=0.1113;AVGPOST=0.9040;RSQ=0.6087;ERATE=0.0194;THETA=0.0012;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 105006100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9973;RSQ=0.9632;ERATE=0.0004;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 105006141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9306;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105006178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.719;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8416;ERATE=0.0004;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105006182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6383;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105006207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105006352 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105006385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105006397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8395;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105006652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5354;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105006795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105006800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0142;AVGPOST=0.9965;RSQ=0.9142;ERATE=0.0005;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105006858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105006925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 105006948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6405;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105006960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8898;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105007085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8121;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105007123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0585;AVGPOST=0.9973;RSQ=0.9814;ERATE=0.0005;THETA=0.0014;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 105007140 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7798;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105007149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0286;AVGPOST=0.9977;RSQ=0.9661;ERATE=0.0004;THETA=0.0011;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105007171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0286;AVGPOST=0.9957;RSQ=0.9407;ERATE=0.0005;THETA=0.0011;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105007186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.790;LDAF=0.0125;AVGPOST=0.9976;RSQ=0.9210;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105007273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0187;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0002;THETA=0.0017;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105007425 . AACC A 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0067;AVGPOST=0.9918;RSQ=0.4905;ERATE=0.0026;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105008137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0278;AVGPOST=0.9991;RSQ=0.9883;ERATE=0.0002;THETA=0.0017;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 105008257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105008345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0115;AVGPOST=0.9992;RSQ=0.9702;ERATE=0.0002;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105008426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0002;THETA=0.0026;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 105008441 rs6143219 AGAACAACTCTAAAGCTAG A 7320 PASS INDEL;BAVGPOST=0.993;BRSQ=0.742;LDAF=0.0191;AVGPOST=0.9866;RSQ=0.7536;ERATE=0.0006;THETA=0.0027;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105008467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105008494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9745;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105008532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105008688 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8360;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105008751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105008767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0586;AVGPOST=0.9992;RSQ=0.9942;ERATE=0.0003;THETA=0.0008;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 105008819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105009003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105009073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0453;AVGPOST=0.9988;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 105009282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105009445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105009462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105009575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5567;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009592 rs60029849 TGTTA T 2505 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0259;AVGPOST=0.9961;RSQ=0.9400;ERATE=0.0006;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 105009715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4206;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105009794 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8783;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105010120 . GC G 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3573;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105010283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8334;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105010294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105010476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9026;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105010532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010603 . C CT 363 PASS INDEL;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8112;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105010638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5388;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105010819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105010911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5647;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105011195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1112;AVGPOST=0.9981;RSQ=0.9917;ERATE=0.0003;THETA=0.0008;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 105011262 . A AC 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105011384 . C CA 481 PASS INDEL;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105011385 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0938;AVGPOST=0.9944;RSQ=0.9751;ERATE=0.0006;THETA=0.0005;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 105011603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105011638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5973;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105011684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3319;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 105011720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105011759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1116;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 105011798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0933;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 105011848 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105011853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0769;AVGPOST=0.9975;RSQ=0.9876;ERATE=0.0004;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 105011976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105012044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105012058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105012073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3327;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 105012138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105012162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6472;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105012178 . G GT 557 PASS INDEL;BAVGPOST=0.994;BRSQ=0.846;LDAF=0.0224;AVGPOST=0.9926;RSQ=0.8616;ERATE=0.0007;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105012247 . T TA 3165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0182;AVGPOST=0.9988;RSQ=0.9742;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105012249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105012336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1118;AVGPOST=0.9980;RSQ=0.9916;ERATE=0.0004;THETA=0.0009;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 105012346 . ATTAC A 185 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105012410 . TTTG T 217 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0057;AVGPOST=0.9980;RSQ=0.8487;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105012468 . TGTTA T 999 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8193;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105012470 . T TA 178 PASS INDEL;BAVGPOST=0.997;BRSQ=0.745;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7939;ERATE=0.0004;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105012598 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8651;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105012798 . TTATC T 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.5178;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105012824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105013077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5771;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105013081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8024;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105013118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.601;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3066;ERATE=0.0009;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105013121 . G GCA 9180 PASS INDEL;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0817;AVGPOST=0.9862;RSQ=0.9425;ERATE=0.0019;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 105013122 . TAC T 93 PASS INDEL;BAVGPOST=0.989;BRSQ=0.683;LDAF=0.0290;AVGPOST=0.9713;RSQ=0.5827;ERATE=0.0062;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105013135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9113;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105013177 . CGGT C 76 PASS INDEL;BAVGPOST=0.986;BRSQ=0.058;LDAF=0.0553;AVGPOST=0.9244;RSQ=0.4609;ERATE=0.0040;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 105013195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 105013208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3313;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 105013209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105013283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8654;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105013372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105013505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2640;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 105013655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105013781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0342;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 105013846 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7056;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 105014023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7066;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 105014390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7052;AVGPOST=0.9954;RSQ=0.9907;ERATE=0.0012;THETA=0.0003;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 105014464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.291;LDAF=0.9319;AVGPOST=0.8981;RSQ=0.3668;ERATE=0.0087;THETA=0.0005;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 105014630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.890;LDAF=0.6692;AVGPOST=0.9285;RSQ=0.8750;ERATE=0.0083;THETA=0.0005;AC=1510;AN=2184 GT:DS:GL:BD 0.69139194 1
1 105014666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8452;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105014756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.717;LDAF=0.0692;AVGPOST=0.9739;RSQ=0.8582;ERATE=0.0009;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 105014786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.1573;AVGPOST=0.9947;RSQ=0.9854;ERATE=0.0006;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 105014885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9332;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105014926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0186;AVGPOST=0.9940;RSQ=0.8747;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 105014986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7058;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 105015010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7469;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105015023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105015073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105015105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.7221;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105015196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 105015347 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105015410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105015446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105015485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0357;AVGPOST=0.9988;RSQ=0.9847;ERATE=0.0004;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 105015518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105015564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7109;ERATE=0.0013;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105015578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105015773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7055;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 105015791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7061;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0006;THETA=0.0007;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 105016018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0110;AVGPOST=0.9969;RSQ=0.8877;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105016044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9177;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105016045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0573;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 105016047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105016103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105016105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105016106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105016125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7409;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105016215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8544;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105016358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7057;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=1545;AN=2184 GT:DS:GL:BD 0.70741761 1
1 105016638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9685;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105016647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7497;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105016694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105016922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105017114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7063;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 105017131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9630;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105017140 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105017280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5047;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 105017392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9695;AVGPOST=0.9994;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 105017543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105017558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7756;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105017605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5375;AVGPOST=0.9901;RSQ=0.9849;ERATE=0.0021;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 105017619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9542;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105017635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0228;AVGPOST=0.9966;RSQ=0.9426;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105017722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7057;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0007;THETA=0.0002;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 105017864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8484;ERATE=0.0006;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105017865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105017948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6104;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105018136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.7027;AVGPOST=0.9934;RSQ=0.9857;ERATE=0.0012;THETA=0.0006;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 105018223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.7026;AVGPOST=0.9950;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 105018245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7961;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105018504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5110;AVGPOST=0.9947;RSQ=0.9926;ERATE=0.0008;THETA=0.0012;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 105018584 . TC T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105018609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9099;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105018697 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8699;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105018698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0423;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 105018713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105018767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8935;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105018902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9588;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105018934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4151;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 105018943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8631;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0007;THETA=0.0004;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 105018952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105018988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6361;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105019089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0432;AVGPOST=0.9962;RSQ=0.9719;ERATE=0.0004;THETA=0.0049;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 105019150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7688;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105019284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6681;ERATE=0.0004;THETA=0.0118;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105019285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105019412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0357;AVGPOST=0.9964;RSQ=0.9646;ERATE=0.0004;THETA=0.0037;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 105019659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105019839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.8951;AVGPOST=0.9950;RSQ=0.9793;ERATE=0.0009;THETA=0.0035;AC=1954;AN=2184 GT:DS:GL:BD 0.89468867 1
1 105019858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8659;ERATE=0.0003;THETA=0.0097;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105019939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105019979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1608;ERATE=0.0003;THETA=0.0031;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105020044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.910;LDAF=0.2711;AVGPOST=0.9612;RSQ=0.9342;ERATE=0.0027;THETA=0.0012;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 105020147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.3377;AVGPOST=0.9879;RSQ=0.9794;ERATE=0.0041;THETA=0.0036;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 105020320 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105020415 . CT C 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.6807;ERATE=0.0005;THETA=0.0047;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105020479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105020541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.800;LDAF=0.0168;AVGPOST=0.9906;RSQ=0.7934;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105020580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5585;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105020623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0173;AVGPOST=0.9987;RSQ=0.9672;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 105020658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.968;LDAF=0.2800;AVGPOST=0.9898;RSQ=0.9780;ERATE=0.0007;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 105020695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.6302;AVGPOST=0.9525;RSQ=0.9271;ERATE=0.0078;THETA=0.0057;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 105020729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.580;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8511;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105020745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.954;LDAF=0.2163;AVGPOST=0.9776;RSQ=0.9517;ERATE=0.0022;THETA=0.0003;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 105020843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5952;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105020956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5292;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105021042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105021156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9185;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105021252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0099;AVGPOST=0.9983;RSQ=0.9290;ERATE=0.0006;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105021388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105021602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105021631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8334;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105021784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8408;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105021868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9399;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105021935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0229;AVGPOST=0.9977;RSQ=0.9618;ERATE=0.0003;THETA=0.0027;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 105022082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2624;AVGPOST=0.9952;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 105022085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105022118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9782;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105022203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7323;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105022218 . G GT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5645;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105022238 rs66844558 A AT 120830 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9994;AVGPOST=0.9989;RSQ=0.3159;ERATE=0.0004;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 105022354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022403 . CA C 1339 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9748;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 105022409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2601;AVGPOST=0.9971;RSQ=0.9940;ERATE=0.0006;THETA=0.0009;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 105022464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8509;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105022510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0029;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105022610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0689;AVGPOST=0.9968;RSQ=0.9834;ERATE=0.0003;THETA=0.0012;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 105022705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105022804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8627;ERATE=0.0006;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105022839 . ACC A 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6128;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105022883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2514;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 105022896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105022943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105022963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105023158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105023212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105023224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105023227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105023262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2511;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 105023409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.6069;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105023480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105023500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8828;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0007;THETA=0.0003;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 105023532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105023691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105023812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105023849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6969;ERATE=0.0003;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105023920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105023971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7722;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105024005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8286;ERATE=0.0004;THETA=0.0057;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105024113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8481;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105024197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4802;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105024371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8317;ERATE=0.0005;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105024415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6675;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105024499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0167;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105024594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0190;AVGPOST=0.9968;RSQ=0.9362;ERATE=0.0003;THETA=0.0018;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105024749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0119;AVGPOST=0.9976;RSQ=0.9275;ERATE=0.0003;THETA=0.0046;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105024773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0002;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105024821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5628;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105024937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8830;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105024967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6133;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105024991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105025062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2306;AVGPOST=0.9824;RSQ=0.9637;ERATE=0.0008;THETA=0.0007;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 105025112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.0953;AVGPOST=0.9929;RSQ=0.9717;ERATE=0.0003;THETA=0.0006;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 105025125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6161;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105025146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.8014;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105025430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7657;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105025543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.680;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.5897;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105025570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.663;LDAF=0.2219;AVGPOST=0.8453;RSQ=0.6402;ERATE=0.0266;THETA=0.0005;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 105025600 . A ATG 1308 PASS INDEL;BAVGPOST=0.951;BRSQ=0.759;LDAF=0.1075;AVGPOST=0.9478;RSQ=0.7959;ERATE=0.0053;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 105025634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.2730;AVGPOST=0.9817;RSQ=0.9674;ERATE=0.0005;THETA=0.0027;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 105025642 . CTA C 14612 PASS INDEL;BAVGPOST=0.931;BRSQ=0.328;LDAF=0.8998;AVGPOST=0.8610;RSQ=0.3686;ERATE=0.0192;THETA=0.0004;AC=2070;AN=2184 GT:DS:GL:BD 0.94780219 1
1 105025795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5151;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105026188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9273;ERATE=0.0003;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105026193 rs71580814 CATATATAT C 8544 PASS INDEL;BAVGPOST=0.865;BRSQ=0.124;LDAF=0.8454;AVGPOST=0.8000;RSQ=0.3901;ERATE=0.0099;THETA=0.0005;AC=1966;AN=2184 GT:DS:GL:BD 0.90018314 1
1 105026398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.875;LDAF=0.2407;AVGPOST=0.9703;RSQ=0.9379;ERATE=0.0012;THETA=0.0004;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 105026439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.744;LDAF=0.0161;AVGPOST=0.9913;RSQ=0.7642;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105026506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.742;LDAF=0.0067;AVGPOST=0.9940;RSQ=0.6452;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105026576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105026606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105026904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6362;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105027035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5181;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105027060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2831;AVGPOST=0.9970;RSQ=0.9935;ERATE=0.0004;THETA=0.0024;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 105027389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9154;ERATE=0.0003;THETA=0.0076;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105027445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1869;AVGPOST=0.9967;RSQ=0.9915;ERATE=0.0007;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 105027483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105027576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7548;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105027590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105027628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0002;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105027812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1860;AVGPOST=0.9962;RSQ=0.9906;ERATE=0.0005;THETA=0.0005;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 105027857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7981;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105028030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105028145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105028236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.4152;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 105028257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8435;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105028301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105028323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105028353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5889;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0008;THETA=0.0002;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 105028379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5888;AVGPOST=0.9937;RSQ=0.9896;ERATE=0.0013;THETA=0.0007;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 105028408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9384;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105028497 rs36000701 CA C 9702 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1184;AVGPOST=0.9980;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 105028510 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8951;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105028523 . C CA 869 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105028527 . AT A 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7275;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105028556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105028608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5536;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105028670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.921;LDAF=0.0230;AVGPOST=0.9960;RSQ=0.9357;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105028680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0089;AVGPOST=0.9988;RSQ=0.9396;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105028688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.930;LDAF=0.0489;AVGPOST=0.9950;RSQ=0.9566;ERATE=0.0023;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 105028694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105028781 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8020;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105028784 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7225;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105029284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3652;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029318 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0022;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 105029514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.8584;AVGPOST=0.9857;RSQ=0.9561;ERATE=0.0009;THETA=0.0012;AC=1878;AN=2184 GT:DS:GL:BD 0.85989010 1
1 105029682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6327;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105029727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9210;ERATE=0.0004;THETA=0.0042;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105029731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7308;ERATE=0.0004;THETA=0.0119;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105029802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.5862;ERATE=0.0004;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105029857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3579;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105029906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0236;AVGPOST=0.9950;RSQ=0.9175;ERATE=0.0014;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105029924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0254;AVGPOST=0.9963;RSQ=0.9442;ERATE=0.0003;THETA=0.0058;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 105029969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7095;ERATE=0.0004;THETA=0.0103;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105030127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.1342;AVGPOST=0.9903;RSQ=0.9687;ERATE=0.0003;THETA=0.0214;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 105030146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0250;AVGPOST=0.9986;RSQ=0.9761;ERATE=0.0003;THETA=0.0163;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 105030258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1225;AVGPOST=0.9939;RSQ=0.9798;ERATE=0.0013;THETA=0.0288;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 105030280 . C CT 1396 PASS INDEL;BAVGPOST=0.995;BRSQ=0.892;LDAF=0.0204;AVGPOST=0.9926;RSQ=0.8448;ERATE=0.0012;THETA=0.0076;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 105030355 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105030363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0902;AVGPOST=0.9975;RSQ=0.9885;ERATE=0.0104;THETA=0.0133;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 105030468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0005;THETA=0.0189;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105030565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0092;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105030584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2425;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0091;THETA=0.0117;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 105030617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105030662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105030708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105030797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0005;THETA=0.0095;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105030911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0121;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105030961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0007;THETA=0.0177;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105030982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105031102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0245;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105031118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0004;THETA=0.0121;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105031120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0442;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0020;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 105031182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2918;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 105031285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105031294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 105031398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105031445 . GC G 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6879;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105031462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0091;AVGPOST=0.9995;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105031551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.9864;AVGPOST=0.9979;RSQ=0.9407;ERATE=0.0004;THETA=0.0011;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 105031685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105031742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105031855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1499;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 105031858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105031860 . AT A 402 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7609;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105031913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1497;AVGPOST=0.9982;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 105031933 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105032027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105032088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4389;AVGPOST=0.9957;RSQ=0.9934;ERATE=0.0010;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 105032096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105032162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0462;AVGPOST=0.9949;RSQ=0.9611;ERATE=0.0006;THETA=0.0001;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 105032203 . GGAT G 426 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8704;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105032246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7293;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105032328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2408;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 105032338 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105032386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4003;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0003;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 105032432 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.9873;AVGPOST=0.9989;RSQ=0.9680;ERATE=0.0003;THETA=0.0001;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 105032474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105032566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0372;AVGPOST=0.9983;RSQ=0.9795;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 105032748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105032824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105032966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105033021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0288;AVGPOST=0.9989;RSQ=0.9862;ERATE=0.0004;THETA=0.0010;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105033133 . AAC A 269 PASS INDEL;BAVGPOST=0.981;BRSQ=0.651;LDAF=0.0428;AVGPOST=0.9603;RSQ=0.5963;ERATE=0.0225;THETA=0.0011;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 105033144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5266;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105033158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.908;LDAF=0.0331;AVGPOST=0.9869;RSQ=0.8373;ERATE=0.0060;THETA=0.0001;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 105033159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0059;AVGPOST=0.9968;RSQ=0.8201;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105033170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1010;AVGPOST=0.9980;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 105033171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9515;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105033211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105033268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6041;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105033278 . CTT C 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7064;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105033358 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6954;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105033516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6615;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105033543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1066;AVGPOST=0.9971;RSQ=0.9894;ERATE=0.0005;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 105033573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5588;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105033653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105033681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105033751 . CTTTTT C 14197 PASS INDEL;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1007;AVGPOST=0.9986;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 105033789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0204;AVGPOST=0.9958;RSQ=0.9281;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 105033822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8891;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105033833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0312;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 105033963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9185;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105033975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0050;AVGPOST=0.9966;RSQ=0.7009;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105034059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6274;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105034074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1136;AVGPOST=0.9949;RSQ=0.9829;ERATE=0.0010;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 105034103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9181;ERATE=0.0004;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105034129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8779;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105034130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105034206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105034224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0136;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 105034501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0823;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 105034749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105034753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0003;THETA=0.0022;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 105034804 . TAAG T 416 PASS INDEL;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8088;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105034809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0336;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 105034816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7419;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105035013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105035071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7482;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105035206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105035207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8938;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105035534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105035546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105035598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8685;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105035621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105035786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9038;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105035795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105035833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105036170 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105036186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105036384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105036388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105036482 . A AT 334 PASS INDEL;BAVGPOST=0.995;BRSQ=0.705;LDAF=0.0080;AVGPOST=0.9940;RSQ=0.6960;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105036721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.3975;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105036819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.7883;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105036837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0582;AVGPOST=0.9978;RSQ=0.9845;ERATE=0.0006;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 105036917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105037014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105037054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105037069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105037132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4679;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105037365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105037404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0571;AVGPOST=0.9984;RSQ=0.9905;ERATE=0.0003;THETA=0.0028;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 105037416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0919;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 105037672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105037723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105037752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9526;ERATE=0.0005;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105037865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7238;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105037892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0920;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 105037909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0896;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 105037962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 105037981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105038141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6898;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105038165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3865;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 105038341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5925;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 105038395 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105038430 . GA G 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105038457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1742;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 105038465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105038543 rs67106850 AC A 1751 PASS INDEL;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 105038543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 105038552 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105038559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105038581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0547;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 105038594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105038624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6606;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105038895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8197;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105039011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105039055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0916;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 105039465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7078;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105039500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105039532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9835;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105039561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105039643 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105039657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9025;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105039830 . CA C 187 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4727;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105039930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105040109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9836;ERATE=0.0004;THETA=0.0038;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105040110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7954;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105040117 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3152;AVGPOST=0.9957;RSQ=0.9931;ERATE=0.0004;THETA=0.0011;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 105040333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0207;AVGPOST=0.9971;RSQ=0.9406;ERATE=0.0005;THETA=0.0053;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 105040485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0048;AVGPOST=0.9943;RSQ=0.5559;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105040495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0692;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0003;THETA=0.0012;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 105040520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.7964;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105040540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0058;AVGPOST=0.9974;RSQ=0.8135;ERATE=0.0009;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105040553 . C CT 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4989;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105040742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8981;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105040929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8728;ERATE=0.0011;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105040976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105040995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105041037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105041053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105041220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8902;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105041407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9560;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105041497 . CA C 479 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0004;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105041543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5712;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105041589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105041637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6431;ERATE=0.0004;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105041689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8719;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105041783 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.2520;AVGPOST=0.9852;RSQ=0.9727;ERATE=0.0006;THETA=0.0005;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 105041850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105041881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105041892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105041962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3212;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0004;THETA=0.0022;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 105042074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105042132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105042161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7898;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105042253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105042293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7459;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105042359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105042365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105042406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105042444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7618;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105042485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105042602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105042816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7952;ERATE=0.0022;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105042871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105042874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105042919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0904;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 105042937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105042968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105042977 . CT C 366 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0088;AVGPOST=0.9950;RSQ=0.7615;ERATE=0.0018;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105043098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105043163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5734;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105043170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105043284 . A AT 386 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0064;AVGPOST=0.9974;RSQ=0.8619;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105043296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105043322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1013;AVGPOST=0.9980;RSQ=0.9911;ERATE=0.0004;THETA=0.0007;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 105043326 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105043340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9326;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105043364 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0905;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 105043499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0691;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 105043633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105043769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105043840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0200;AVGPOST=0.9989;RSQ=0.9740;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105043852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105043877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105043949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105044054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105044071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105044103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5295;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105044118 . A AC 21519 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5942;AVGPOST=0.9885;RSQ=0.9821;ERATE=0.0008;THETA=0.0007;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 105044151 rs11387111 C CT 71134 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5959;AVGPOST=0.9899;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 105044154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105044196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9781;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105044234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9994;RSQ=0.9714;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105044247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8317;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105044307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9551;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105044369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105044392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6540;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105044506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7357;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105044523 . T TCC 4620 PASS INDEL;BAVGPOST=0.985;BRSQ=0.935;LDAF=0.1203;AVGPOST=0.9916;RSQ=0.9710;ERATE=0.0005;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 105044671 rs35860188 C CCT 14967 PASS INDEL;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.1297;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 105044672 . T TCC 6075 PASS INDEL;BAVGPOST=0.989;BRSQ=0.954;LDAF=0.1250;AVGPOST=0.9933;RSQ=0.9792;ERATE=0.0003;THETA=0.0015;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 105044678 . T TC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105044689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105044698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1317;AVGPOST=0.9977;RSQ=0.9923;ERATE=0.0007;THETA=0.0007;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 105044712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7754;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105044754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5701;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105044791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2413;AVGPOST=0.9963;RSQ=0.9929;ERATE=0.0013;THETA=0.0037;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 105045163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9365;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105045167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5160;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105045206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8528;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105045211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105045223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0652;AVGPOST=0.9978;RSQ=0.9860;ERATE=0.0004;THETA=0.0010;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 105045274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5435;ERATE=0.0012;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105045285 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0153;AVGPOST=0.9994;RSQ=0.9799;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105045294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7130;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105045296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105045406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105045485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0585;AVGPOST=0.9979;RSQ=0.9880;ERATE=0.0003;THETA=0.0029;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 105045496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105045553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6861;ERATE=0.0006;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105045562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0495;AVGPOST=0.9973;RSQ=0.9774;ERATE=0.0004;THETA=0.0021;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105045576 . G GC 3202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0550;AVGPOST=0.9965;RSQ=0.9747;ERATE=0.0005;THETA=0.0009;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 105045609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0162;AVGPOST=0.9966;RSQ=0.9107;ERATE=0.0005;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105045640 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4848;ERATE=0.0006;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105045865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0048;AVGPOST=0.9956;RSQ=0.6374;ERATE=0.0008;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105046043 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.814;LDAF=0.0112;AVGPOST=0.9904;RSQ=0.6629;ERATE=0.0008;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105046096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0180;AVGPOST=0.9920;RSQ=0.8122;ERATE=0.0007;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105046112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.832;LDAF=0.2574;AVGPOST=0.8846;RSQ=0.7738;ERATE=0.0106;THETA=0.0052;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 105046162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.695;LDAF=0.9476;AVGPOST=0.9457;RSQ=0.6110;ERATE=0.0022;THETA=0.0009;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 105046200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.845;BRSQ=0.601;LDAF=0.2283;AVGPOST=0.8498;RSQ=0.6654;ERATE=0.0104;THETA=0.0037;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 105046203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5757;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105046617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0583;AVGPOST=0.9967;RSQ=0.9763;ERATE=0.0004;THETA=0.0083;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 105046671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105046820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0337;AVGPOST=0.9974;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 105046949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105047139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7800;ERATE=0.0003;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105047166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9762;ERATE=0.0003;THETA=0.0049;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105047503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105047508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7564;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105047573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.6178;AVGPOST=0.9770;RSQ=0.9655;ERATE=0.0066;THETA=0.0121;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 105047606 . G GT 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105047620 . TC T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4642;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105047852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105047859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8051;ERATE=0.0012;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105047947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8274;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105048012 . C CG 177 PASS INDEL;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0040;AVGPOST=0.9948;RSQ=0.4484;ERATE=0.0009;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105048146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6634;ERATE=0.0004;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105048404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8994;ERATE=0.0004;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105048429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8612;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105048490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1269;AVGPOST=0.9928;RSQ=0.9747;ERATE=0.0007;THETA=0.0018;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 105048494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8225;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105048522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105048602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0004;THETA=0.0070;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105048650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105048685 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6643;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105048728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6007;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105048885 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9584;ERATE=0.0004;THETA=0.0052;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105048945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0016;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105049079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105049343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0035;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105049482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105049663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0110;AVGPOST=0.9949;RSQ=0.8121;ERATE=0.0012;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105049726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105049863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105049893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1131;AVGPOST=0.9970;RSQ=0.9893;ERATE=0.0004;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 105049946 . TC T 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105049976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105050167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105050184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7691;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105050263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9292;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105050289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0212;AVGPOST=0.9992;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 105050325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105050357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105050368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105050378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5638;AVGPOST=0.9931;RSQ=0.9887;ERATE=0.0006;THETA=0.0005;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 105050662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105050698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.9000;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105050769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.936;LDAF=0.0905;AVGPOST=0.9739;RSQ=0.8898;ERATE=0.0007;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 105050870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6253;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105050941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7897;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105050945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105051109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6622;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105051189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7450;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105051192 . TTC T 1009 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9975;RSQ=0.9143;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105051225 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105051255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8651;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105051281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9627;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105051313 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6704;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105051329 . GT G 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6983;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105051392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105051464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105051620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8482;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105051655 rs111593701 CCTGA C 11496 PASS INDEL;BAVGPOST=0.986;BRSQ=0.942;LDAF=0.1304;AVGPOST=0.9943;RSQ=0.9803;ERATE=0.0006;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 105051696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.1326;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0004;THETA=0.0010;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105051705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105051843 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105051848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105051931 . C CT 253 PASS INDEL;BAVGPOST=0.993;BRSQ=0.650;LDAF=0.0083;AVGPOST=0.9887;RSQ=0.4770;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105051964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1336;AVGPOST=0.9929;RSQ=0.9746;ERATE=0.0008;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 105051966 . G GT 230 PASS INDEL;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0044;AVGPOST=0.9947;RSQ=0.5271;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105051966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.549;LDAF=0.0150;AVGPOST=0.9863;RSQ=0.6199;ERATE=0.0007;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105052142 . CG C 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.461;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.3995;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105052152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.852;LDAF=0.1128;AVGPOST=0.9785;RSQ=0.9190;ERATE=0.0012;THETA=0.0005;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 105052164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0103;AVGPOST=0.9940;RSQ=0.7748;ERATE=0.0010;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105052247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0060;AVGPOST=0.9939;RSQ=0.6423;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105052253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1334;AVGPOST=0.9969;RSQ=0.9895;ERATE=0.0005;THETA=0.0009;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105052262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105052352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9190;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105052385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7201;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105052664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1325;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0004;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105052671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.9975;AVGPOST=0.9987;RSQ=0.8076;ERATE=0.0003;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 105052680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1335;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0005;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105052694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1330;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 105052739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5099;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105052777 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.544;LDAF=0.0069;AVGPOST=0.9929;RSQ=0.6028;ERATE=0.0020;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105052873 . AAAG A 7445 PASS INDEL;BAVGPOST=0.975;BRSQ=0.929;LDAF=0.2116;AVGPOST=0.9862;RSQ=0.9675;ERATE=0.0014;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 105052880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105052904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0840;AVGPOST=0.9958;RSQ=0.9801;ERATE=0.0004;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 105052958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2889;AVGPOST=0.9954;RSQ=0.9911;ERATE=0.0008;THETA=0.0013;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 105052987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6244;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105053039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1310;AVGPOST=0.9954;RSQ=0.9838;ERATE=0.0006;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 105053088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0059;AVGPOST=0.9920;RSQ=0.4904;ERATE=0.0006;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105053113 rs35229982 TG T 2328 PASS INDEL;BAVGPOST=0.929;BRSQ=0.855;LDAF=0.2555;AVGPOST=0.9542;RSQ=0.9112;ERATE=0.0012;THETA=0.0008;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 105053156 . AG A 2005 PASS INDEL;BAVGPOST=0.942;BRSQ=0.707;LDAF=0.1056;AVGPOST=0.9483;RSQ=0.8056;ERATE=0.0055;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 105053166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9662;ERATE=0.0005;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105053189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.936;LDAF=0.1290;AVGPOST=0.9925;RSQ=0.9740;ERATE=0.0007;THETA=0.0016;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 105053210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6061;ERATE=0.0006;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105053297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4800;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105053325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3094;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0004;THETA=0.0008;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 105053326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1324;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 105053377 rs113115423 C CA 13902 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1324;AVGPOST=0.9974;RSQ=0.9906;ERATE=0.0006;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 105053424 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1234;AVGPOST=0.9920;RSQ=0.9699;ERATE=0.0019;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 105053425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.810;LDAF=0.0566;AVGPOST=0.9658;RSQ=0.7599;ERATE=0.0113;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 105053426 . C CT 14737 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1321;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0003;THETA=0.0010;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 105053426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0005;THETA=0.0009;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 105053480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6031;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105053509 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105053515 rs112474789 GA G 8793 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1326;AVGPOST=0.9972;RSQ=0.9904;ERATE=0.0005;THETA=0.0022;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 105053537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105053629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1338;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 105053646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0498;AVGPOST=0.9991;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 105053751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105053764 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8509;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105053767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8588;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105053802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7427;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105053843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3736;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105053869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9205;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105054036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.761;LDAF=0.0088;AVGPOST=0.9962;RSQ=0.8312;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105054071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9668;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105054157 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105054271 . CTA C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105054315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0274;AVGPOST=0.9945;RSQ=0.9212;ERATE=0.0004;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 105054388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105054408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105054417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105054437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0495;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0003;THETA=0.0022;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105054504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105054511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105054539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9429;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105054565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105054633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7280;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105054716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105054723 . C CAT 1036 PASS INDEL;BAVGPOST=0.988;BRSQ=0.835;LDAF=0.0439;AVGPOST=0.9884;RSQ=0.8830;ERATE=0.0014;THETA=0.0015;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 105054785 . T TG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5154;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105054856 . CGTGT C 727 PASS INDEL;BAVGPOST=0.996;BRSQ=0.717;LDAF=0.0086;AVGPOST=0.9928;RSQ=0.6655;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105054878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0923;AVGPOST=0.9969;RSQ=0.9863;ERATE=0.0004;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 105055002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105055052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105055164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105055199 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105055263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105055275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 105055344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0860;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 105055487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105055523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0860;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 105055749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105055792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105055837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7868;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105055880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2249;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 105055887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0314;AVGPOST=0.9988;RSQ=0.9838;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 105056030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 105056091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105056141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105056159 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8602;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105056296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8540;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105056316 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6761;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105056391 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1229;AVGPOST=0.9967;RSQ=0.9895;ERATE=0.0005;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 105056505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0843;AVGPOST=0.9985;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 105056523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8896;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105056619 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056805 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6901;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105056824 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1231;AVGPOST=0.9976;RSQ=0.9924;ERATE=0.0004;THETA=0.0013;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 105056847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105056882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0427;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0009;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 105056951 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 105056976 . GA G 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6905;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105056991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0184;AVGPOST=0.9974;RSQ=0.9460;ERATE=0.0006;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 105057165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9422;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105057304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0213;AVGPOST=0.9984;RSQ=0.9693;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 105057330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0864;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 105057400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9578;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105057697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0633;AVGPOST=0.9865;RSQ=0.9228;ERATE=0.0023;THETA=0.0009;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 105057761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0875;AVGPOST=0.9961;RSQ=0.9809;ERATE=0.0004;THETA=0.0014;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 105057770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105057799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0890;AVGPOST=0.9941;RSQ=0.9733;ERATE=0.0006;THETA=0.0006;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 105057873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0593;AVGPOST=0.9980;RSQ=0.9856;ERATE=0.0004;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 105057921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0113;AVGPOST=0.9990;RSQ=0.9610;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105057956 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6333;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105058160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8540;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105058179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0880;AVGPOST=0.9949;RSQ=0.9756;ERATE=0.0007;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 105058244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105058276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0883;AVGPOST=0.9975;RSQ=0.9875;ERATE=0.0005;THETA=0.0010;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 105058290 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8208;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105058315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.585;LDAF=0.0088;AVGPOST=0.9930;RSQ=0.7095;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105058559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9989;RSQ=0.9726;ERATE=0.0005;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 105058581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0343;AVGPOST=0.9924;RSQ=0.9096;ERATE=0.0003;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 105058663 . T TTTTATTTATTTATTTA 4459 PASS INDEL;BAVGPOST=0.963;BRSQ=0.717;LDAF=0.0806;AVGPOST=0.9879;RSQ=0.9289;ERATE=0.0015;THETA=0.0011;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 105058666 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0133;AVGPOST=0.9925;RSQ=0.7760;ERATE=0.0008;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105058682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.840;LDAF=0.0218;AVGPOST=0.9859;RSQ=0.7452;ERATE=0.0017;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 105058686 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.798;LDAF=0.0751;AVGPOST=0.9859;RSQ=0.9198;ERATE=0.0008;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 105058690 . TA T 33 PASS INDEL;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0069;AVGPOST=0.9967;RSQ=0.7902;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105058693 . A ATTTTTTT 905 PASS INDEL;BAVGPOST=0.991;BRSQ=0.744;LDAF=0.0211;AVGPOST=0.9867;RSQ=0.7548;ERATE=0.0011;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105058694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4508;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105058713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105058747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0117;AVGPOST=0.9973;RSQ=0.9162;ERATE=0.0005;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105058831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0254;AVGPOST=0.9960;RSQ=0.9427;ERATE=0.0004;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 105058872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9232;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105058929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105059099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8085;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105059280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105059281 . CT C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105059378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7360;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105059465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8414;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105059643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5425;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105059740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0208;AVGPOST=0.9992;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 105059854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8951;ERATE=0.0003;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105059877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8479;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105059894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8949;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105059924 . TC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4872;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105059931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0214;AVGPOST=0.9977;RSQ=0.9622;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 105060069 . A AAAG 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105060092 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2301;AVGPOST=0.9931;RSQ=0.9868;ERATE=0.0005;THETA=0.0085;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 105060095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6967;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105060183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7675;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105060406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1951;AVGPOST=0.9939;RSQ=0.9866;ERATE=0.0007;THETA=0.0005;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 105060479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105060619 . T TA 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4876;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105060631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105060632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0593;AVGPOST=0.9988;RSQ=0.9912;ERATE=0.0004;THETA=0.0013;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 105060676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105060678 MERGED_DEL_2_3791 GGAACTCCATGAGCACATCCTACTGAGCTCTAAGGTTTTATTGTGCAGCTGAGGAAGTGATACATACATGAAGAGTACTAACCTGCAGCAGTGCTAAGTTTCATGTATACTATTCTATTTCTCTGTCTCACCTACTATACAGTGGCTCCAGGAATAGGAAAGAGAGAGAAGCTGAGATATCAGAAATGCT GTTAC . . SV;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0178;AVGPOST=0.9964;RSQ=0.9111;ERATE=0.0012;THETA=0.0020;CIEND=-50;103;CIPOS=-73;84;END=63615960;HOMLEN=0;HOMSEQ;SOURCE=AssembledBreakpoints_63614636_6361 GT:DS:GL:BD 0.01648352 0
1 105060687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105060848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105060947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.1977;AVGPOST=0.9911;RSQ=0.9810;ERATE=0.0004;THETA=0.0012;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 105060998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.5570;AVGPOST=0.9798;RSQ=0.9712;ERATE=0.0022;THETA=0.0006;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 105061012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105061094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7238;ERATE=0.0003;THETA=0.0076;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105061199 rs71760863 G GA 6536 PASS INDEL;BAVGPOST=0.977;BRSQ=0.900;LDAF=0.1013;AVGPOST=0.9733;RSQ=0.8899;ERATE=0.0020;THETA=0.0025;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 105061207 . A AT 256 PASS INDEL;BAVGPOST=0.958;BRSQ=0.702;LDAF=0.0701;AVGPOST=0.9684;RSQ=0.8189;ERATE=0.0007;THETA=0.0007;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 105061213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0095;AVGPOST=0.9968;RSQ=0.8880;ERATE=0.0003;THETA=0.0093;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105061364 . AT A 77 PASS INDEL;BAVGPOST=0.997;BRSQ=0.458;LDAF=0.0059;AVGPOST=0.9916;RSQ=0.4656;ERATE=0.0011;THETA=0.0038;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105061381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105061424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105061427 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8239;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105061438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105061628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105061658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9216;ERATE=0.0003;THETA=0.0060;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105061793 . CT C 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0003;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105061887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105061909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0120;AVGPOST=0.9967;RSQ=0.9096;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105062004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105062009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8968;ERATE=0.0004;THETA=0.0075;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105062081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6708;ERATE=0.0006;THETA=0.0106;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105062105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0038;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105062121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2885;AVGPOST=0.9925;RSQ=0.9857;ERATE=0.0007;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 105062135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105062273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105062495 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7130;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105062518 . AG A 685 PASS INDEL;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9355;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105062591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9373;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105062613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105062636 . TAA T 568 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0069;AVGPOST=0.9983;RSQ=0.9044;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105062657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105062671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0548;AVGPOST=0.9979;RSQ=0.9851;ERATE=0.0003;THETA=0.0027;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 105062676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5269;AVGPOST=0.9961;RSQ=0.9940;ERATE=0.0006;THETA=0.0002;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 105062915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105062931 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105062953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8524;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105062987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8066;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105063055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105063189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.500;LDAF=0.0038;AVGPOST=0.9947;RSQ=0.5025;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105063262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105063275 . CTGGTATAA C 781 PASS INDEL;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8307;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105063374 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0716;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 105063437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8411;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105063470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105063500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0799;AVGPOST=0.9984;RSQ=0.9906;ERATE=0.0003;THETA=0.0016;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 105063617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105063628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105063755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105063784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105063791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9596;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105063793 . AACTT A 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105063883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8102;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105063903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0234;AVGPOST=0.9961;RSQ=0.9403;ERATE=0.0004;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 105063917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105063967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105064032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105064053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8304;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105064158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105064190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 105064210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0274;AVGPOST=0.9988;RSQ=0.9842;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 105064255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0197;AVGPOST=0.9979;RSQ=0.9526;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105064273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105064317 . T TA 14917 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0659;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 105064329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105064366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105064423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0089;AVGPOST=0.9990;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105064518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105064601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105064615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5593;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105064616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3135;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 105064645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105064709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7469;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105064715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5237;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105064728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6945;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105064847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105065104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105065116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0486;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105065164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105065170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105065216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105065238 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105065299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105065307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105065409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9404;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105065541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0066;AVGPOST=0.9921;RSQ=0.5683;ERATE=0.0012;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105065659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5946;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105065708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0111;AVGPOST=0.9959;RSQ=0.8518;ERATE=0.0009;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105065757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105065838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3206;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105065886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105065965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7835;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105066041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0401;AVGPOST=0.9983;RSQ=0.9838;ERATE=0.0005;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 105066112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1131;AVGPOST=0.9982;RSQ=0.9928;ERATE=0.0004;THETA=0.0001;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 105066156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105066328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105066627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6250;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0007;THETA=0.0003;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 105066694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4343;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 105067066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0098;AVGPOST=0.9961;RSQ=0.8404;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105067122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105067148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5934;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105067157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4772;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105067290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8047;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105067303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105067341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105067392 . G GT 373 PASS INDEL;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0087;AVGPOST=0.9985;RSQ=0.9274;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105067407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0121;AVGPOST=0.9978;RSQ=0.9264;ERATE=0.0006;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105067483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8179;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105067484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0052;AVGPOST=0.9969;RSQ=0.7523;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105067890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9248;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105068187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7052;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105068252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4296;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105068408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4719;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105068540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7272;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105068634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6681;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105068647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8751;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105068729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9231;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105068752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105068819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105068850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0003;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105068977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 105069090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105069107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7911;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105069460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6276;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 105069693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9719;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105069909 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6944;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105069934 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6315;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105070038 rs72065213 TAGG T 1119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9980;RSQ=0.9129;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105070271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4589;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105070461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105070591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8064;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 105070821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105071097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8465;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105071149 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8203;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105071330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105071389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7103;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105071407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105071447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0175;AVGPOST=0.9959;RSQ=0.9192;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105071493 . GTA G 16 PASS INDEL;BAVGPOST=0.994;BRSQ=0.639;LDAF=0.0204;AVGPOST=0.9723;RSQ=0.4489;ERATE=0.0058;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105071495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0038;AVGPOST=0.9956;RSQ=0.5861;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105071498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105071640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7928;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 105071778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6916;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105071824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8060;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0006;THETA=0.0002;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 105071944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6185;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105072033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3888;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105072068 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.8094;AVGPOST=0.9883;RSQ=0.9714;ERATE=0.0019;THETA=0.0006;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 105072069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.943;LDAF=0.7910;AVGPOST=0.9781;RSQ=0.9540;ERATE=0.0018;THETA=0.0005;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 105072140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.931;LDAF=0.7932;AVGPOST=0.9740;RSQ=0.9456;ERATE=0.0027;THETA=0.0003;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 105072192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105072342 . CTG C 14673 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1195;AVGPOST=0.9958;RSQ=0.9863;ERATE=0.0005;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 105072347 rs55900228 CT C 8333 PASS INDEL;BAVGPOST=0.895;BRSQ=0.784;LDAF=0.6614;AVGPOST=0.8288;RSQ=0.7230;ERATE=0.0484;THETA=0.0006;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 105072393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4788;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105072505 . AC A 375 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5375;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105072531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9987;RSQ=0.9602;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105072564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5524;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105072606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5211;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105072628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105072688 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3812;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105072694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105072766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105072829 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9990;RSQ=0.9809;ERATE=0.0005;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105072846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.2493;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105072965 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7929;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 105073157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6878;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105073196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105073372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105073508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9486;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105073599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105073711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105073872 rs56008835 T TG 84848 PASS INDEL;BAVGPOST=0.977;BRSQ=0.952;LDAF=0.7494;AVGPOST=0.9701;RSQ=0.9446;ERATE=0.0075;THETA=0.0004;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 105073902 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105073921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8061;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0007;THETA=0.0006;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 105074027 . G GT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7056;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105074107 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9207;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105074114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7936;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0006;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 105074294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.7934;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0008;THETA=0.0005;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 105074400 rs113214143 AG A 1062 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9746;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105074446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7589;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105074527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9961;RSQ=0.9012;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105074776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6553;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105074872 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0045;AVGPOST=0.9949;RSQ=0.5428;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105074879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7277;ERATE=0.0003;THETA=0.0086;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105075112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0116;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9108;ERATE=0.0003;THETA=0.0093;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105075257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7794;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105075262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.8012;ERATE=0.0003;THETA=0.0185;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105075373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9563;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105075517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6346;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105075651 rs35839076 AAGAT A 83367 PASS INDEL;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.6088;AVGPOST=0.9787;RSQ=0.9670;ERATE=0.0051;THETA=0.0031;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 105075684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.9965;AVGPOST=0.9986;RSQ=0.8728;ERATE=0.0003;THETA=0.0001;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 105075766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0277;AVGPOST=0.9991;RSQ=0.9887;ERATE=0.0003;THETA=0.0067;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 105075874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7523;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 105075876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105075958 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105076034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6169;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 105076057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5431;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0199;AVGPOST=0.9986;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105076184 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7763;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105076185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5324;AVGPOST=0.9944;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 105076365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0065;AVGPOST=0.9923;RSQ=0.5671;ERATE=0.0010;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105076373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7541;AVGPOST=0.9966;RSQ=0.9933;ERATE=0.0008;THETA=0.0005;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 105076555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6629;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0148;AVGPOST=0.9986;RSQ=0.9597;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105076589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0708;AVGPOST=0.9966;RSQ=0.9797;ERATE=0.0004;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 105076718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1257;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 105076833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0424;AVGPOST=0.9973;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 105076857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105076907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105076934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8846;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105076983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0077;AVGPOST=0.9969;RSQ=0.8425;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105076990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7249;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105077120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105077200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6871;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105077211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9190;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105077223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9358;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105077232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0339;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 105077265 rs67412142 CATT C 59582 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7483;AVGPOST=0.9764;RSQ=0.9542;ERATE=0.0033;THETA=0.0005;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 105077345 rs72502642 TTAG T 41362 PASS INDEL;BAVGPOST=0.986;BRSQ=0.487;LDAF=0.9785;AVGPOST=0.9786;RSQ=0.5931;ERATE=0.0044;THETA=0.0002;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 105077350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105077392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105077427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7469;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105077445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8447;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105077631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105077758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.701;LDAF=0.0596;AVGPOST=0.9646;RSQ=0.7703;ERATE=0.0030;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 105077783 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.478;LDAF=0.0304;AVGPOST=0.9729;RSQ=0.6638;ERATE=0.0020;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 105077824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.898;LDAF=0.0649;AVGPOST=0.9843;RSQ=0.9131;ERATE=0.0005;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 105077829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.7369;AVGPOST=0.9626;RSQ=0.9314;ERATE=0.0048;THETA=0.0003;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 105078014 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4772;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105078063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105078065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9510;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105078114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105078130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6942;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105078380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0441;AVGPOST=0.9975;RSQ=0.9782;ERATE=0.0003;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 105078555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105078665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0513;AVGPOST=0.9982;RSQ=0.9845;ERATE=0.0005;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 105078724 . G GT 68 PASS INDEL;BAVGPOST=0.985;BRSQ=0.505;LDAF=0.0282;AVGPOST=0.9635;RSQ=0.4831;ERATE=0.0075;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105078792 . G GT 150 PASS INDEL;BAVGPOST=0.994;BRSQ=0.514;LDAF=0.0129;AVGPOST=0.9864;RSQ=0.5863;ERATE=0.0026;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105078806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6576;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105078835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8903;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105078867 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5834;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 105078874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105079023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3562;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105079160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0278;AVGPOST=0.9983;RSQ=0.9741;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 105079170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6312;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105079254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9061;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105079300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7533;AVGPOST=0.9957;RSQ=0.9911;ERATE=0.0006;THETA=0.0007;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 105079342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0062;AVGPOST=0.9963;RSQ=0.7635;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105079343 . AAAT A 252 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9046;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105079559 . ATAAT A 1205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9972;RSQ=0.7956;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105079561 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5490;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105079760 . A AT 287 PASS INDEL;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8531;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105079772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8942;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105079849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7911;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105079889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7339;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105079927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105080924 . G GT 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105080931 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105080992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9346;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105081040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4316;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 105081111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7967;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105081144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105081314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.6570;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105081425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4230;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0006;THETA=0.0006;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 105081563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105081799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2081;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 105081814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8926;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105081896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6483;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105082056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6938;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105082104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0101;AVGPOST=0.9982;RSQ=0.9286;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105082111 . CACAA C 42851 PASS INDEL;BAVGPOST=0.978;BRSQ=0.964;LDAF=0.4475;AVGPOST=0.9603;RSQ=0.9418;ERATE=0.0095;THETA=0.0005;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 105082145 . C CA 159 PASS INDEL;BAVGPOST=0.997;BRSQ=0.577;LDAF=0.0044;AVGPOST=0.9952;RSQ=0.5938;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105082167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7540;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105082183 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7562;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105082239 rs35091864 TG T 40285 PASS INDEL;BAVGPOST=0.973;BRSQ=0.954;LDAF=0.4174;AVGPOST=0.9851;RSQ=0.9774;ERATE=0.0011;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 105082344 . GA G 5461 PASS INDEL;BAVGPOST=0.917;BRSQ=0.861;LDAF=0.3592;AVGPOST=0.9019;RSQ=0.8592;ERATE=0.0072;THETA=0.0007;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 105082348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105082375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105082381 . TCTC T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105082449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105082492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105082658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5018;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105082767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4823;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105082781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9989;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 105082798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0145;AVGPOST=0.9948;RSQ=0.8540;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105082848 . GACA G 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105082871 . AGAT A 9654 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0782;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0004;THETA=0.0007;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 105082928 . ATAG A 131 PASS INDEL;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7633;ERATE=0.0011;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105082933 . TAGC T 99 PASS INDEL;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8077;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105082934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9978;RSQ=0.8821;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105083075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7467;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105083151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105083246 . CCT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105083308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6575;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105083345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9099;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105083478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6403;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105083545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105083577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0366;AVGPOST=0.9993;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 105083616 . CCT C 1100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8739;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105083760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7824;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105083799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6075;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105083819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105083875 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8717;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105084108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.706;LDAF=0.3846;AVGPOST=0.8624;RSQ=0.6900;ERATE=0.1220;THETA=0.0010;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 105084197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3451;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105084262 . CT C 155 PASS INDEL;BAVGPOST=0.996;BRSQ=0.338;LDAF=0.0048;AVGPOST=0.9923;RSQ=0.4428;ERATE=0.0005;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105084373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.749;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7680;ERATE=0.0005;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105084501 . AAAAAAT A 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0090;AVGPOST=0.9914;RSQ=0.6348;ERATE=0.0007;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105084545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0726;AVGPOST=0.9967;RSQ=0.9824;ERATE=0.0004;THETA=0.0008;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 105084587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.7211;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105084712 . G GA 606 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9977;RSQ=0.8996;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105084876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8185;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105084944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8526;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105085040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3830;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105085215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.866;LDAF=0.0389;AVGPOST=0.9957;RSQ=0.9554;ERATE=0.0006;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 105085366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.887;LDAF=0.4192;AVGPOST=0.9375;RSQ=0.9054;ERATE=0.0059;THETA=0.0006;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 105085421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4956;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105085641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0106;AVGPOST=0.9947;RSQ=0.7901;ERATE=0.0007;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105085754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105085837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2445;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 105085891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105085942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1128;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 105085952 . ATCT A 466 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8608;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105086032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105086140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7980;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105086246 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9732;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105086377 . T TA 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6436;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105086411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5327;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105086461 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105086520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4922;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105086546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1030;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0004;THETA=0.0002;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 105086588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8951;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105086589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105086653 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105086781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105086818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0135;AVGPOST=0.9969;RSQ=0.9033;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105086840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105087003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7384;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105087040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8575;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105087042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5730;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105087090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0127;AVGPOST=0.9948;RSQ=0.8536;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105087210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6747;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105087287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105087371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105087381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105087649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105087667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105087693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1188;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 105087876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105087912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1193;AVGPOST=0.9980;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 105087988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105088022 . AT A 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.5713;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105088046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8126;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105088100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105088186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105088193 . AAG A 953 PASS INDEL;BAVGPOST=0.993;BRSQ=0.958;LDAF=0.1002;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 105088221 rs72184976 GAGA G 13904 PASS INDEL;BAVGPOST=0.993;BRSQ=0.958;LDAF=0.1011;AVGPOST=0.9966;RSQ=0.9840;ERATE=0.0004;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 105088223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7871;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105088244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.9537;AVGPOST=0.9970;RSQ=0.9736;ERATE=0.0005;THETA=0.0004;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 105088367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9395;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105088378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8058;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105088408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7174;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105088510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7321;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105088557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4958;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 105088640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8182;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105088658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6405;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105088764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6535;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105088864 . A AT 218 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8768;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105088877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4531;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105088909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105088947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1027;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 105089004 . TTCCC T 522 PASS INDEL;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0112;AVGPOST=0.9935;RSQ=0.7927;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105089112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.6058;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105089126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105089127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5637;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105089165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105089376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4157;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105089422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105089423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6660;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105089544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105089553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105089556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105089660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7000;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105089706 . CA C 3114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9849;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 105089774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8418;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105089977 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3086;AVGPOST=0.9934;RSQ=0.9894;ERATE=0.0007;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 105089981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9514;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105090050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105090335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105090417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8258;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105090662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090664 . GCTTC G 948 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8431;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105090669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105090804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105090813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.5366;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105090924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9620;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105091012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9321;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105091235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105091263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0287;AVGPOST=0.9982;RSQ=0.9726;ERATE=0.0006;THETA=0.0029;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105091334 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5254;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105091372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0109;AVGPOST=0.9947;RSQ=0.8022;ERATE=0.0007;THETA=0.0025;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105091465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.898;LDAF=0.0221;AVGPOST=0.9962;RSQ=0.9431;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 105091655 . TC T 153 PASS INDEL;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8143;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105091758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7435;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105091903 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0254;AVGPOST=0.9984;RSQ=0.9773;ERATE=0.0003;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 105091940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9455;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105092023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7067;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105092052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3017;AVGPOST=0.9931;RSQ=0.9871;ERATE=0.0005;THETA=0.0004;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 105092105 . C CA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0033;AVGPOST=0.9958;RSQ=0.5269;ERATE=0.0006;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105092248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105092364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105092392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.7306;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105092464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105092510 . C CA 159 PASS INDEL;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7115;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105092523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8572;ERATE=0.0005;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105092709 . G GC 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6297;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105092944 . A AGTCC 338 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6650;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105092972 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105093148 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2994;AVGPOST=0.9962;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 105093164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105093233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7840;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105093382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9983;RSQ=0.3100;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105093631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105093728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.8001;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105093734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105093808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4909;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105093902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.565;LDAF=0.0179;AVGPOST=0.9904;RSQ=0.7667;ERATE=0.0015;THETA=0.0035;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105094070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5348;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105094100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0186;AVGPOST=0.9980;RSQ=0.9615;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105094152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7923;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0005;THETA=0.0015;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 105094234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4534;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105094287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105094551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105094560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8099;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105094576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105094902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105094960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105094968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105094969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3491;AVGPOST=0.9948;RSQ=0.9907;ERATE=0.0004;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 105094998 . G GT 17 PASS INDEL;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0049;AVGPOST=0.9933;RSQ=0.4854;ERATE=0.0010;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105095044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5074;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105095117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7516;AVGPOST=0.9965;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 105095133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105095188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6223;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105095245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105095246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6578;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105095376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105095442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9127;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105095466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.455;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105095650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7289;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105095698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105095764 . GAA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105095786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8012;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105095919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105096196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105096212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 105096371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0173;AVGPOST=0.9961;RSQ=0.9188;ERATE=0.0003;THETA=0.0016;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105096516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4435;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105096750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105096836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.862;LDAF=0.0341;AVGPOST=0.9876;RSQ=0.8564;ERATE=0.0011;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 105096902 . G GC 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5115;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105096984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105097018 . CAG C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6991;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105097226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8831;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105097230 . CAT C 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6129;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105097264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105097467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.7212;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105097571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0004;THETA=0.0017;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105097667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1283;AVGPOST=0.9979;RSQ=0.9924;ERATE=0.0005;THETA=0.0009;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 105097787 . G GT 336 PASS INDEL;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0050;AVGPOST=0.9950;RSQ=0.6423;ERATE=0.0011;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105097863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9082;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105097908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105098073 . AAAGTT A 1329 PASS INDEL;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0093;AVGPOST=0.9920;RSQ=0.6728;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105098085 rs5775019 TG T 38511 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3369;AVGPOST=0.9894;RSQ=0.9848;ERATE=0.0023;THETA=0.0002;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 105098158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3418;AVGPOST=0.9966;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 105098297 . TTA T 223 PASS INDEL;BAVGPOST=0.991;BRSQ=0.900;LDAF=0.0504;AVGPOST=0.9951;RSQ=0.9620;ERATE=0.0006;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 105098344 rs71720256 TATA T 6947 PASS INDEL;BAVGPOST=0.994;BRSQ=0.942;LDAF=0.0499;AVGPOST=0.9975;RSQ=0.9779;ERATE=0.0006;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105098345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.389;LDAF=0.0051;AVGPOST=0.9932;RSQ=0.4618;ERATE=0.0010;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105098980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.9904;AVGPOST=0.9979;RSQ=0.9128;ERATE=0.0003;THETA=0.0005;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 105099069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105099171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0496;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105099235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105099250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0498;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105099265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4316;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105099350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105099363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.9912;AVGPOST=0.9976;RSQ=0.8934;ERATE=0.0004;THETA=0.0002;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 105099383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105099424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9645;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105099433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9269;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105099571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105099679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2075;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0004;THETA=0.0001;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 105099686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2502;AVGPOST=0.9966;RSQ=0.9932;ERATE=0.0005;THETA=0.0007;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 105099715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7836;ERATE=0.0011;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105099741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0872;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 105099795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 105099861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105100035 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9614;AVGPOST=0.9987;RSQ=0.9851;ERATE=0.0004;THETA=0.0010;AC=2101;AN=2184 GT:DS:GL:BD 0.96199632 1
1 105100053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105100115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0501;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105100188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1280;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0005;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 105100202 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9525;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105100275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0487;AVGPOST=0.9988;RSQ=0.9905;ERATE=0.0004;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105100288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8296;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105100290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1275;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 105100388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0086;AVGPOST=0.9956;RSQ=0.8263;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105100409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6436;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105100671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0077;AVGPOST=0.9974;RSQ=0.8707;ERATE=0.0004;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105100688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105100961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8818;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105101006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0123;AVGPOST=0.9945;RSQ=0.8241;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105101192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105101253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5628;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105101426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6305;ERATE=0.0006;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105101514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5497;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105101520 . C CA 2938 PASS INDEL;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0252;AVGPOST=0.9982;RSQ=0.9718;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 105101573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.2745;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105101585 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105101644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4431;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 105101720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105101742 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6764;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105101763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7793;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105101766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105101784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8022;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105101876 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105101920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0497;AVGPOST=0.9970;RSQ=0.9740;ERATE=0.0005;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 105101935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9968;RSQ=0.8514;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105102009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105102027 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7456;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105102046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4469;AVGPOST=0.9954;RSQ=0.9936;ERATE=0.0009;THETA=0.0001;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 105102060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105102113 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.3763;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105102201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0229;AVGPOST=0.9968;RSQ=0.9462;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105102203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0229;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0002;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 105102337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4633;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0007;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 105102453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105102461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105102511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7442;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105102569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105102651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7953;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105102805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105102807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0445;AVGPOST=0.9990;RSQ=0.9897;ERATE=0.0003;THETA=0.0001;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 105102925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105103097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0002;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 105103271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105103360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105103424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105103452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105103533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5813;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105103669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8604;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105103672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0500;AVGPOST=0.9975;RSQ=0.9809;ERATE=0.0004;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 105103710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3327;AVGPOST=0.9924;RSQ=0.9876;ERATE=0.0004;THETA=0.0006;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 105103746 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7129;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105103764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8513;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105103776 . GTTA G 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5286;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105103791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105103910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5664;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105103967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105103974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105104008 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8620;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105104027 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105104135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6221;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105104255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105104278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6343;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105104395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0419;AVGPOST=0.9989;RSQ=0.9887;ERATE=0.0005;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 105104414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8698;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105104651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6820;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105104709 rs68125494 TGATACTGCA T 2284 PASS INDEL;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0217;AVGPOST=0.9985;RSQ=0.9716;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105104733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0002;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105104799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105104841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0093;AVGPOST=0.9968;RSQ=0.8605;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105104865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0122;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105105042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0231;AVGPOST=0.9929;RSQ=0.8706;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105105061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105105109 . CTTA C 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6220;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105105171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7719;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105105186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0455;AVGPOST=0.9990;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 105105218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105105254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8659;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105105310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6910;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105105467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105105695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0463;AVGPOST=0.9986;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 105105711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8522;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105105935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6333;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105105953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105106011 . CTTTGT C 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105106169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9766;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 105106536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105106559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0242;AVGPOST=0.9957;RSQ=0.9290;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105106682 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6009;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105106772 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105106867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105107158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105107251 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105107320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105107391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105107531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6547;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105107656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0730;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 105107689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7926;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105107825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8441;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105107861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108141 . GT G 324 PASS INDEL;BAVGPOST=0.978;BRSQ=0.475;LDAF=0.0286;AVGPOST=0.9647;RSQ=0.5038;ERATE=0.0047;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105108375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.925;LDAF=0.4114;AVGPOST=0.9361;RSQ=0.9145;ERATE=0.0226;THETA=0.0006;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 105108381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.780;LDAF=0.0093;AVGPOST=0.9959;RSQ=0.8291;ERATE=0.0005;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105108390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8424;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105108412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5226;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9231;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105108609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6843;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105108612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4532;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 105108670 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105108759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105108822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0489;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 105108829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5298;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105108837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.903;LDAF=0.0557;AVGPOST=0.9876;RSQ=0.9140;ERATE=0.0004;THETA=0.0009;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 105108844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105109186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7759;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105109255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105109507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0757;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0008;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 105109536 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105109573 . CCAA C 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105109615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105109667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7708;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105109671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8927;ERATE=0.0011;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105109799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9593;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105109945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.5386;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105110051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0183;AVGPOST=0.9970;RSQ=0.9425;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105110151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8561;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105110153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9984;RSQ=0.9754;ERATE=0.0002;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105110224 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0753;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0002;THETA=0.0006;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 105110504 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0728;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 105110520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7726;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105110580 . A AT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105110701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105110707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105110725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105110737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6410;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105110898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7252;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105110922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.9183;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105111032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8887;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105111082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0719;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0004;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 105111122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4481;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 105111201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0212;AVGPOST=0.9972;RSQ=0.9509;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 105111207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0118;AVGPOST=0.9858;RSQ=0.5176;ERATE=0.0029;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105111332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8896;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105111385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105111400 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105111443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9970;RSQ=0.9549;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105111472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9868;ERATE=0.0003;THETA=0.0020;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105111501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6657;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105111652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1133;AVGPOST=0.9971;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 105111682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.631;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.6979;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105111692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0366;AVGPOST=0.9989;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 105111750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0124;AVGPOST=0.9985;RSQ=0.9544;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105111802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4696;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105111803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8699;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105111854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105111926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0186;AVGPOST=0.9964;RSQ=0.9233;ERATE=0.0004;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105112265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.478;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5716;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105112270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0121;AVGPOST=0.9979;RSQ=0.9241;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105112275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9957;RSQ=0.8560;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105112398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8068;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105112532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.880;LDAF=0.0207;AVGPOST=0.9931;RSQ=0.8735;ERATE=0.0005;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105112911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9672;ERATE=0.0002;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105113049 . A AAATTTC 565 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6237;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105113211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5848;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105113218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0366;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0004;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 105113288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105113327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8082;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105113354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8071;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105113356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0376;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0011;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 105113439 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5228;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105113449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105113529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.687;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.6754;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105113559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9274;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105113591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6149;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105113622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8487;ERATE=0.0006;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105113634 . A AT 11326 PASS INDEL;BAVGPOST=0.941;BRSQ=0.914;LDAF=0.4940;AVGPOST=0.9164;RSQ=0.8893;ERATE=0.0156;THETA=0.0004;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 105113860 rs67145119 T TA 48528 PASS INDEL;BAVGPOST=0.968;BRSQ=0.955;LDAF=0.5298;AVGPOST=0.9649;RSQ=0.9546;ERATE=0.0040;THETA=0.0018;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 105113861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4111;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105113894 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0953;AVGPOST=0.9980;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 105113937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0135;AVGPOST=0.9990;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105113969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.741;LDAF=0.0067;AVGPOST=0.9956;RSQ=0.7193;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105114156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7905;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105114228 . TAA T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0043;AVGPOST=0.9947;RSQ=0.5069;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105114229 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4840;ERATE=0.0005;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105114231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.5429;AVGPOST=0.9930;RSQ=0.9903;ERATE=0.0006;THETA=0.0013;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 105114288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.806;LDAF=0.0087;AVGPOST=0.9957;RSQ=0.8044;ERATE=0.0004;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105114326 . G GT 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0039;AVGPOST=0.9953;RSQ=0.5347;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105114326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0445;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0008;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 105114397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0435;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0004;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 105114425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105114432 rs113413287 AT A 7951 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0833;AVGPOST=0.9979;RSQ=0.9890;ERATE=0.0004;THETA=0.0008;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 105114468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0447;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 105114494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105114605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0832;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0020;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 105114675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9406;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105114676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105114689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0077;AVGPOST=0.9974;RSQ=0.8812;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105114696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105114712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 105114759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105114824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4764;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105114834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2522;AVGPOST=0.9906;RSQ=0.9816;ERATE=0.0006;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 105115004 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0109;AVGPOST=0.9949;RSQ=0.8033;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105115181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105115273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4435;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105115274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8655;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105115353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9417;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105115517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105115518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6140;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105115624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.2090;AVGPOST=0.9819;RSQ=0.9566;ERATE=0.0006;THETA=0.0010;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 105115709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7164;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105115735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105115737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6128;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105115888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6056;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105116061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105116205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5636;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105116234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7487;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105116374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105116472 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4659;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105116478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0885;AVGPOST=0.9979;RSQ=0.9893;ERATE=0.0006;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 105116559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7207;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105116766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105116779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4971;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105116811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105117075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9175;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105117353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8973;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105117428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105117549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4634;AVGPOST=0.9963;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 105117603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105117763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105117857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8395;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105117879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105117931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0172;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 105117951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105117989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105118047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6291;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105118173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105118325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5089;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105118326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9465;ERATE=0.0006;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105118397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0942;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 105118408 . CT C 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6884;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105118419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8093;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105118464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4304;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105118523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6604;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105118642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5880;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105118735 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105119017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0942;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 105119102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105119127 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105119137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4814;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0005;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 105119139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105119274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105119450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105119477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7991;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105119689 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105119700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5368;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 105119738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7627;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105119829 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105120090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0548;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 105120207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6120;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105120214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9977;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 105120224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7236;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105120226 . AC A 854 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8310;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105120274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8934;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105120365 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4585;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105120560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105120678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105120720 . AT A 12129 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1660;AVGPOST=0.9939;RSQ=0.9840;ERATE=0.0010;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 105120820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0947;AVGPOST=0.9988;RSQ=0.9938;ERATE=0.0004;THETA=0.0002;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 105120975 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4757;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105121215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1705;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 105121268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1629;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0006;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 105121383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105121485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0055;AVGPOST=0.9963;RSQ=0.7149;ERATE=0.0016;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105121522 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105121642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0944;AVGPOST=0.9987;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 105121742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9032;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105121746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0579;AVGPOST=0.9986;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 105121809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7191;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105121856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4221;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 105121957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105121981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0002;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105122024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105122077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105122078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0224;AVGPOST=0.9980;RSQ=0.9611;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105122115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4220;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 105122184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9655;ERATE=0.0002;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105122209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0486;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105122215 . ACTTACCCAT A 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5871;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105122344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1883;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 105122348 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105122391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9329;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105122489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2053;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 105122644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7756;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105122646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105123185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9993;RSQ=0.9629;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105123206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105123425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4710;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105123437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105123634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105123643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9343;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105123652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4229;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 105123690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105123799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105123845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105123847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105123861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105124005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9221;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105124090 . AAG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105124198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9532;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105124255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0002;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105124347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8644;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105124394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.719;LDAF=0.8825;AVGPOST=0.9091;RSQ=0.6652;ERATE=0.0190;THETA=0.0004;AC=1982;AN=2184 GT:DS:GL:BD 0.90750915 1
1 105124728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6992;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105124787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6631;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105124837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9694;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105124845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8849;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105124907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6420;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 105125114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105125266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9720;ERATE=0.0004;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105125269 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105125394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4626;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105125447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105125573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105125718 . GT G 190 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5384;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105125883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0402;AVGPOST=0.9990;RSQ=0.9902;ERATE=0.0002;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 105126009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0002;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 105126034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0146;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105126067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.6066;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105126132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2051;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0006;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 105126154 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105126217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105126220 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105126348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105126377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105126405 rs5745540 CTAGATA C 126 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3122;ERATE=0.0006;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105126585 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105126762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8592;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105126841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8679;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105127056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5615;AVGPOST=0.9900;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 105127105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5964;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127386 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105127413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105127463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5856;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105127514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105127550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6663;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105127591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127696 . TAA T 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4872;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105127918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9386;ERATE=0.0004;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105127946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8101;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105127999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0125;AVGPOST=0.9968;RSQ=0.8994;ERATE=0.0004;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105128096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9403;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105128370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2941;AVGPOST=0.9926;RSQ=0.9874;ERATE=0.0004;THETA=0.0032;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 105128453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0590;AVGPOST=0.9951;RSQ=0.9627;ERATE=0.0005;THETA=0.0007;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 105128455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0073;AVGPOST=0.9970;RSQ=0.8703;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105128456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105128559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9196;ERATE=0.0004;THETA=0.0081;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105128621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105128930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0077;AVGPOST=0.9975;RSQ=0.8695;ERATE=0.0003;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105128960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8711;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105128997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0307;AVGPOST=0.9992;RSQ=0.9891;ERATE=0.0003;THETA=0.0057;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 105129110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105129132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105129165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9459;ERATE=0.0003;THETA=0.0078;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105129242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105129398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8256;ERATE=0.0008;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105129432 . AG A 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105129531 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105129579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105129598 . C CATT 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8629;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105129622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105129804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105130071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6844;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105130256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105130266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105130311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.884;LDAF=0.0281;AVGPOST=0.9938;RSQ=0.9096;ERATE=0.0007;THETA=0.0013;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 105130321 . G GA 1566 PASS INDEL;BAVGPOST=0.934;BRSQ=0.582;LDAF=0.1293;AVGPOST=0.8756;RSQ=0.5161;ERATE=0.0490;THETA=0.0082;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 105130395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.685;LDAF=0.0388;AVGPOST=0.9671;RSQ=0.6519;ERATE=0.0137;THETA=0.0020;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 105130397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105130426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0127;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105130504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105130590 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0021;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105130627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105130703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105130737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5320;AVGPOST=0.9934;RSQ=0.9903;ERATE=0.0006;THETA=0.0019;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 105130790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105130875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0027;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105130907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105130921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9984;RSQ=0.2737;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105131131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3972;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4347;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105131810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8865;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105132166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8462;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105132170 . AAAG A 783 PASS INDEL;BAVGPOST=0.977;BRSQ=0.710;LDAF=0.0413;AVGPOST=0.9884;RSQ=0.8869;ERATE=0.0008;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 105132282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.7910;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0006;THETA=0.0005;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 105132293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9993;RSQ=0.9857;ERATE=0.0004;THETA=0.0041;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 105132323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105132351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0647;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 105132446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105132449 . CTT C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6781;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105132883 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105133176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105133323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105133370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105133807 . A AT 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6200;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105134006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105134016 . CATT C 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5764;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105134313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0054;AVGPOST=0.9972;RSQ=0.7989;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105134369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4155;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105134376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105134378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6151;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105134438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105134491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5853;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105134492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105134514 . G GACTT 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5413;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105135244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0038;AVGPOST=0.9957;RSQ=0.6313;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105135429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0077;AVGPOST=0.9919;RSQ=0.6247;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105135469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9978;RSQ=0.9893;ERATE=0.0005;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 105135494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0454;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 105135516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.387;LDAF=0.0684;AVGPOST=0.8980;RSQ=0.3606;ERATE=0.0144;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 105135693 . AATTAT A 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0106;AVGPOST=0.9889;RSQ=0.5713;ERATE=0.0012;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105135693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.543;LDAF=0.0093;AVGPOST=0.9883;RSQ=0.5465;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105135744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.828;LDAF=0.0235;AVGPOST=0.9936;RSQ=0.8911;ERATE=0.0006;THETA=0.0021;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 105135858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.882;LDAF=0.8175;AVGPOST=0.9075;RSQ=0.7644;ERATE=0.0101;THETA=0.0006;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 105135934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105136070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9972;RSQ=0.9644;ERATE=0.0005;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 105136273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.5402;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105136284 . CCA C 10 PASS INDEL;BAVGPOST=0.987;BRSQ=0.230;LDAF=0.0050;AVGPOST=0.9941;RSQ=0.5297;ERATE=0.0011;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105136449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3778;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105136600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105136691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.922;LDAF=0.8613;AVGPOST=0.9803;RSQ=0.9352;ERATE=0.0005;THETA=0.0005;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 105136695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.919;LDAF=0.8609;AVGPOST=0.9793;RSQ=0.9343;ERATE=0.0006;THETA=0.0010;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 105136696 . T TGC 29515 PASS INDEL;BAVGPOST=0.967;BRSQ=0.887;LDAF=0.8359;AVGPOST=0.9392;RSQ=0.8329;ERATE=0.0080;THETA=0.0004;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 105136696 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7278;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105136776 . TAA T 440 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8874;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105136946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9030;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105136958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105136960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105137085 . TC T 20 PASS INDEL;BAVGPOST=0.988;BRSQ=0.425;LDAF=0.0107;AVGPOST=0.9904;RSQ=0.6275;ERATE=0.0010;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105137276 rs112098768 CT C 14323 PASS INDEL;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2310;AVGPOST=0.9927;RSQ=0.9840;ERATE=0.0005;THETA=0.0003;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 105137277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0528;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 105137294 rs66544364 CT C 16312 PASS INDEL;BAVGPOST=0.990;BRSQ=0.962;LDAF=0.1461;AVGPOST=0.9946;RSQ=0.9830;ERATE=0.0004;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 105137295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6423;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105137421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9689;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 105137467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0541;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 105137483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5407;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105137676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137720 . C CT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8102;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105137735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.839;LDAF=0.0125;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0005;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105137776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105137802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1872;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0006;THETA=0.0003;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 105137850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2952;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 105137860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105137965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7710;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105138097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1473;AVGPOST=0.9978;RSQ=0.9922;ERATE=0.0007;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 105138237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105138277 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105138313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2924;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 105138455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8524;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105138496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5838;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105138695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105138696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4433;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105138754 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6270;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105138835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105138893 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105138907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4222;AVGPOST=0.9914;RSQ=0.9856;ERATE=0.0018;THETA=0.0004;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 105138924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105138949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105138954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9970;RSQ=0.9226;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105139056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8597;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105139122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8971;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105139232 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1455;AVGPOST=0.9971;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 105139301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105139331 rs6143292 TTGTATGAAATATAAAATA T 14056 PASS INDEL;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.0535;AVGPOST=0.9972;RSQ=0.9770;ERATE=0.0006;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 105139360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8188;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105139414 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105139443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105139515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105139564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3224;ERATE=0.0013;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105139700 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105139802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105139911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 105139994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2956;AVGPOST=0.9963;RSQ=0.9931;ERATE=0.0009;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 105140021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105140059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2941;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 105140200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9145;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105140229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105140268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7174;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105140297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105140329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8920;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105140344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8094;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105140356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105140433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105140435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105140498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4813;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105140616 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2325;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 105140663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0421;AVGPOST=0.9979;RSQ=0.9805;ERATE=0.0003;THETA=0.0010;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 105140788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2918;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0008;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 105140806 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2919;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0006;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 105140862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8855;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105140879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9503;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105140933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9497;ERATE=0.0004;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105140938 . AC A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6296;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105140964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105141203 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4420;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105141217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9261;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105141218 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105141340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.801;LDAF=0.0293;AVGPOST=0.9931;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 105141350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0426;AVGPOST=0.9974;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 105141395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105141434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0102;AVGPOST=0.9976;RSQ=0.9047;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105141440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105141457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4512;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105141463 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.955;LDAF=0.3213;AVGPOST=0.9925;RSQ=0.9866;ERATE=0.0007;THETA=0.0005;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 105141509 rs35304443 AT A 15362 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1885;AVGPOST=0.9954;RSQ=0.9871;ERATE=0.0004;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 105141514 . GA G 984 PASS INDEL;BAVGPOST=0.944;BRSQ=0.852;LDAF=0.2109;AVGPOST=0.9708;RSQ=0.9399;ERATE=0.0006;THETA=0.0002;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 105141560 rs113330397 AG A 16978 PASS INDEL;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2349;AVGPOST=0.9951;RSQ=0.9884;ERATE=0.0004;THETA=0.0003;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 105141562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9436;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105141619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9803;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105141622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105141670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5217;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105141721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0067;AVGPOST=0.9932;RSQ=0.6674;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105141726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9623;ERATE=0.0003;THETA=0.0043;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105141752 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0152;AVGPOST=0.9968;RSQ=0.9222;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 105141795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1879;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 105141928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0060;AVGPOST=0.9983;RSQ=0.8790;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105141933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9834;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105141936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8414;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105142724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0213;AVGPOST=0.9990;RSQ=0.9791;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105142729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.903;LDAF=0.3781;AVGPOST=0.9372;RSQ=0.9046;ERATE=0.0118;THETA=0.0004;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 105143148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.802;LDAF=0.3617;AVGPOST=0.9084;RSQ=0.8684;ERATE=0.0080;THETA=0.0004;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 105144077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4225;AVGPOST=0.9931;RSQ=0.9884;ERATE=0.0011;THETA=0.0006;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 105144669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0076;AVGPOST=0.9956;RSQ=0.7851;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105144689 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0193;AVGPOST=0.9960;RSQ=0.9167;ERATE=0.0006;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105144696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0222;AVGPOST=0.9985;RSQ=0.9717;ERATE=0.0006;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 105144711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9347;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105144760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.9958;AVGPOST=0.9983;RSQ=0.8340;ERATE=0.0004;THETA=0.0005;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 105144805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7543;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105144808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.566;LDAF=0.0064;AVGPOST=0.9929;RSQ=0.5463;ERATE=0.0015;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105144853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0040;AVGPOST=0.9948;RSQ=0.4746;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105144869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0089;AVGPOST=0.9957;RSQ=0.8205;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105144930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0743;AVGPOST=0.9957;RSQ=0.9763;ERATE=0.0004;THETA=0.0002;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 105145075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5415;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105145080 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5671;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4401;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105145185 . TAA T 203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6936;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105145190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4216;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 105145246 . A AGG 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4207;AVGPOST=0.9955;RSQ=0.9928;ERATE=0.0008;THETA=0.0004;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 105145307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9704;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 105145359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6556;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9436;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105145398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105145485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9283;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 105145508 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105145636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1635;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 105145673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9297;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105145748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6901;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105145769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145800 . CT C 160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6297;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105145815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105145912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105145964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9986;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 105146054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9619;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105146092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105146282 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4228;AVGPOST=0.9939;RSQ=0.9911;ERATE=0.0010;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 105146414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146442 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1812;AVGPOST=0.9968;RSQ=0.9916;ERATE=0.0006;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 105146448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9363;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105146719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7585;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105146732 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2861;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 105146761 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9596;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105146767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6356;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105146773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1807;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 105146801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105146804 rs67988669 GTAGGC G 105814 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9123;AVGPOST=0.9966;RSQ=0.9837;ERATE=0.0007;THETA=0.0008;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 105146887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105146907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105146926 . A AT 347 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8701;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105146977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8732;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105147028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4445;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105147051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0256;AVGPOST=0.9952;RSQ=0.9326;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 105147055 . AAC A 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6377;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105147100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5895;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105147135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105147147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1807;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 105147151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105147166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105147261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105147331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3719;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105147335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8784;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105147398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8673;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105147406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8478;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105147425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9765;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105147578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7372;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105147607 . TG T 969 PASS INDEL;BAVGPOST=0.994;BRSQ=0.695;LDAF=0.0093;AVGPOST=0.9942;RSQ=0.7639;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105147618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4224;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0007;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 105147619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8559;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105147700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105147709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5765;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105147725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7535;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105147859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0126;AVGPOST=0.9979;RSQ=0.9320;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105147909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7215;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105147965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105148013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7582;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105148084 . AT A 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105148093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 105148267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 105148377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9182;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=2005;AN=2184 GT:DS:GL:BD 0.91804028 1
1 105148413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105148492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9041;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105148564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9993;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105148594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7167;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105148689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4626;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105148882 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5505;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105149059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105149065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149092 . AT A 537 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105149101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9988;RSQ=0.9650;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105149139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9301;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105149192 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0187;AVGPOST=0.9986;RSQ=0.9775;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105149372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5123;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 105149436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105149471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105149477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9721;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105149547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105149658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105149943 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0572;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 105150013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0847;AVGPOST=0.9980;RSQ=0.9909;ERATE=0.0005;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 105150143 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105150174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6925;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 105150206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105150225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4911;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105150474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7499;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105150506 . GT G 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9531;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105150547 . GCAGA G 20 PASS INDEL;BAVGPOST=0.997;BRSQ=0.599;LDAF=0.0085;AVGPOST=0.9878;RSQ=0.4317;ERATE=0.0023;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105150631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2702;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 105150723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8187;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105150827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5981;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105150845 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0077;AVGPOST=0.9958;RSQ=0.8561;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105150847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105150888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105150981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105150983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6561;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105151078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151106 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8252;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105151148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0374;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 105151150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7790;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105151582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9770;ERATE=0.0003;THETA=0.0029;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105151621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.714;LDAF=0.0070;AVGPOST=0.9948;RSQ=0.7528;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105151700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5478;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0004;THETA=0.0010;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 105151710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105151735 . CT C 469 PASS INDEL;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8734;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105151905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2902;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0008;THETA=0.0004;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 105151964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105151987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5416;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105152138 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5578;ERATE=0.0010;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105152273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2420;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 105152294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6692;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105152488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.3746;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105152496 . C CT 61 PASS INDEL;BAVGPOST=0.992;BRSQ=0.528;LDAF=0.0227;AVGPOST=0.9701;RSQ=0.4810;ERATE=0.0049;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105152588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105152603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9632;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0004;THETA=0.0006;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 105152636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3211;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0006;THETA=0.0006;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 105152642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105152757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9168;ERATE=0.0003;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105152770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4546;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105152819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9799;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105152906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.8901;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105152910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9736;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0004;THETA=0.0007;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 105152932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.8999;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105153043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8419;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105153079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4734;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105153139 . C CTA 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6241;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105153157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6912;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105153196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5883;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0009;THETA=0.0003;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 105153268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4539;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105153343 . A AAAAT 29040 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.6568;AVGPOST=0.9715;RSQ=0.9529;ERATE=0.0049;THETA=0.0007;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 105153375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8513;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105153496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3182;AVGPOST=0.9936;RSQ=0.9883;ERATE=0.0012;THETA=0.0005;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 105153521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3206;AVGPOST=0.9938;RSQ=0.9885;ERATE=0.0008;THETA=0.0006;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 105153596 . CTGTT C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5244;ERATE=0.0010;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105153656 . GTTTGT G 290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6135;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105153658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105153668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7404;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105153785 . T TTA 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4140;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105153794 rs59282561 G GTGTGTGTGTA 109786 PASS INDEL;BAVGPOST=0.977;BRSQ=0.938;LDAF=0.7851;AVGPOST=0.9066;RSQ=0.8117;ERATE=0.0131;THETA=0.0004;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 105153844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105153996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0577;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 105154018 . TC T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5311;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105154089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105154094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5880;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0026;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 105154114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105154167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0261;AVGPOST=0.9948;RSQ=0.9145;ERATE=0.0003;THETA=0.0025;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 105154419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8274;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105154441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0134;AVGPOST=0.9964;RSQ=0.8954;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105154822 . TA T 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.3350;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105154838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105154859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5121;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105154913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0354;AVGPOST=0.9979;RSQ=0.9757;ERATE=0.0004;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 105154967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5872;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0006;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 105155173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105155220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3192;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 105155297 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8382;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105155369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8668;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105155419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6447;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105155509 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105155515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105155577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8806;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105155608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105155653 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6638;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105155654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9515;ERATE=0.0003;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105155747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9391;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105155768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7591;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105155806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5933;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105155857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105155918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105155923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0356;AVGPOST=0.9973;RSQ=0.9707;ERATE=0.0004;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 105155925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4823;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9633;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 105156053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7295;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105156094 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156124 . CT C 1049 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0106;AVGPOST=0.9976;RSQ=0.9066;ERATE=0.0006;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105156156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.9914;AVGPOST=0.9983;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 105156165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105156265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5236;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105156402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156446 . TAGTC T 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0007;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105156464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156496 rs72127990 G GT 180 PASS INDEL;BAVGPOST=0.995;BRSQ=0.610;LDAF=0.0107;AVGPOST=0.9851;RSQ=0.4414;ERATE=0.0043;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105156631 . CAGAG C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5387;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156701 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 105156797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7724;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105156808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4498;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105156895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9674;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105156914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9319;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105156951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105156979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6488;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105157040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9532;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105157161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9448;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105157192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6225;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8802;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105157248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1822;AVGPOST=0.9949;RSQ=0.9856;ERATE=0.0004;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 105157391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6454;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0005;THETA=0.0006;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 105157398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6085;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105157460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105157476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9633;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 105157499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157501 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4945;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8835;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105157625 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7664;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105157883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105157899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.6466;ERATE=0.0010;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105157987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.678;LDAF=0.0215;AVGPOST=0.9887;RSQ=0.7864;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 105157998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.639;LDAF=0.0749;AVGPOST=0.9263;RSQ=0.5743;ERATE=0.0135;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 105157999 . CT C 18138 PASS INDEL;BAVGPOST=0.975;BRSQ=0.950;LDAF=0.3928;AVGPOST=0.9401;RSQ=0.9049;ERATE=0.0090;THETA=0.0005;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 105158026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.926;LDAF=0.2569;AVGPOST=0.9481;RSQ=0.8995;ERATE=0.0105;THETA=0.0008;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 105158035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105158113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0258;AVGPOST=0.9984;RSQ=0.9718;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 105158167 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.835;LDAF=0.1255;AVGPOST=0.9468;RSQ=0.8222;ERATE=0.0064;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 105158314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5024;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105158363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9318;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105158372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5140;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105158529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105158553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105158606 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105158637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1450;AVGPOST=0.9980;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 105159016 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9207;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105159048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105159090 rs58772609 A AT 14694 PASS INDEL;BAVGPOST=0.960;BRSQ=0.909;LDAF=0.2975;AVGPOST=0.9032;RSQ=0.8271;ERATE=0.0239;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 105159193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105159237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3998;AVGPOST=0.9928;RSQ=0.9884;ERATE=0.0008;THETA=0.0006;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 105159368 . CACTT C 115 PASS INDEL;BAVGPOST=0.993;BRSQ=0.517;LDAF=0.0122;AVGPOST=0.9922;RSQ=0.7449;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105159550 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9265;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105159695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7347;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105159736 . CTTTAAAAAGT C 429 PASS INDEL;BAVGPOST=0.997;BRSQ=0.535;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7646;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105159874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0098;AVGPOST=0.9972;RSQ=0.8777;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105159949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6875;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105159985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2731;AVGPOST=0.9951;RSQ=0.9905;ERATE=0.0009;THETA=0.0003;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 105160015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105160082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0265;AVGPOST=0.9973;RSQ=0.9553;ERATE=0.0003;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 105160099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 105160115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105160137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0119;AVGPOST=0.9973;RSQ=0.8989;ERATE=0.0004;THETA=0.0014;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105160241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0076;AVGPOST=0.9929;RSQ=0.6232;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105160287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7358;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105160344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.655;LDAF=0.0205;AVGPOST=0.9909;RSQ=0.8095;ERATE=0.0009;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 105160431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9977;RSQ=0.9554;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 105161361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0257;AVGPOST=0.9919;RSQ=0.8798;ERATE=0.0009;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 105161435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8216;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105161517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9660;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105161600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7648;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105161928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.957;LDAF=0.1407;AVGPOST=0.9902;RSQ=0.9724;ERATE=0.0006;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 105162221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1084;AVGPOST=0.9955;RSQ=0.9816;ERATE=0.0005;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 105162249 . CG C 853 PASS INDEL;BAVGPOST=0.965;BRSQ=0.565;LDAF=0.0512;AVGPOST=0.9567;RSQ=0.6735;ERATE=0.0045;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 105162347 . A AAT 480 PASS INDEL;BAVGPOST=0.948;BRSQ=0.626;LDAF=0.0701;AVGPOST=0.9619;RSQ=0.8019;ERATE=0.0013;THETA=0.0026;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 105162358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.551;LDAF=0.0234;AVGPOST=0.9710;RSQ=0.5074;ERATE=0.0061;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 105162359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2545;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 105162399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.414;LDAF=0.0098;AVGPOST=0.9872;RSQ=0.4705;ERATE=0.0012;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105162526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4717;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105162690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4562;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105162795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105162867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0261;AVGPOST=0.9976;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 105162887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9844;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 105162933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105162945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7892;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105162958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9991;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105163073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105163104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105163152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105163182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6940;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105163233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9209;ERATE=0.0012;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105163253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.618;LDAF=0.9464;AVGPOST=0.9505;RSQ=0.6266;ERATE=0.0143;THETA=0.0002;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 105163258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9347;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105163375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7630;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 105163416 . GT G 4647 PASS INDEL;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0815;AVGPOST=0.9846;RSQ=0.9275;ERATE=0.0014;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 105163436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0185;AVGPOST=0.9953;RSQ=0.8958;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 105163501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7679;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 105163590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105163645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105163823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105163942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8325;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105163956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105164027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7681;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 105164031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105164055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105164183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9815;ERATE=0.0003;THETA=0.0032;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105164218 . A AG 909 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0163;AVGPOST=0.9984;RSQ=0.9561;ERATE=0.0004;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105164361 . CT C 516 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0118;AVGPOST=0.9957;RSQ=0.8480;ERATE=0.0006;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105164421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5277;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105164490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2144;AVGPOST=0.9917;RSQ=0.9825;ERATE=0.0022;THETA=0.0002;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 105164581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7694;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0006;THETA=0.0002;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 105164631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7611;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 105164670 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7697;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0006;THETA=0.0030;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 105164724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105164962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105164966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105164976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105164989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105165079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9913;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105165086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105165158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105165210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0789;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0003;THETA=0.0022;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 105165225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0636;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 105165304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9402;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105165399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8407;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105165476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105165502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5663;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105165561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2751;AVGPOST=0.9952;RSQ=0.9908;ERATE=0.0006;THETA=0.0005;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 105165609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6232;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105165613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105165732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3987;AVGPOST=0.9847;RSQ=0.9753;ERATE=0.0022;THETA=0.0003;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 105165760 . CTT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3242;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105165840 . CAA C 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7562;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105165879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105165959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6337;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105165963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9981;RSQ=0.3192;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105166119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105166306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105166320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8615;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105166324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105166326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2756;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 105166335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0787;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 105166408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2091;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0011;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 105166412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0639;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 105166561 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105166578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8517;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105166580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5219;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105166622 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105166684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 105166714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105166799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105166821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105166846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9044;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105166980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105167054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8746;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105167057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9132;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105167176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105167268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7835;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105167412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0156;AVGPOST=0.9990;RSQ=0.9687;ERATE=0.0005;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 105167484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.577;LDAF=0.0079;AVGPOST=0.9871;RSQ=0.3819;ERATE=0.0022;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105167486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8504;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105167491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0089;AVGPOST=0.9979;RSQ=0.9009;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105167515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9327;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105167861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5176;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0004;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105168228 . GC G 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5001;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105168228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105168303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4737;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6463;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9564;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105168516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7204;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105168682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.528;LDAF=0.0144;AVGPOST=0.9829;RSQ=0.5687;ERATE=0.0025;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105168705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105168764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0298;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 105168959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7832;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105169013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105169110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105169210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7606;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105169320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105169443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105169551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105169655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105169656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105169702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1526;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 105169833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105169872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9378;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105169972 . GACA G 410 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4980;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105170268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2572;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 105170279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5746;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 105170371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6188;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105170495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.7924;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105170529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0005;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105170546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7968;AVGPOST=0.9956;RSQ=0.9898;ERATE=0.0007;THETA=0.0004;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 105170599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6682;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105170606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1468;AVGPOST=0.9969;RSQ=0.9903;ERATE=0.0005;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 105170627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0328;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 105170683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0439;AVGPOST=0.9979;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 105170724 . A AC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105170790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105170803 . C CAG 546 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7750;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105170900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105170952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0303;AVGPOST=0.9987;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 105171033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105171150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0329;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 105171166 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2196;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 105171240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105171611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105171727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0452;AVGPOST=0.9965;RSQ=0.9708;ERATE=0.0012;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 105171830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105171871 . GGGTTAAA G 215 PASS INDEL;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7529;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105171889 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105171923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.911;LDAF=0.3529;AVGPOST=0.9713;RSQ=0.9550;ERATE=0.0007;THETA=0.0028;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 105171980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2245;AVGPOST=0.9959;RSQ=0.9911;ERATE=0.0007;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 105172029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6240;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105172094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105172133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105172247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7271;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105172268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105172314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3100;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 105172489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0340;AVGPOST=0.9985;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 105172845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0366;AVGPOST=0.9980;RSQ=0.9803;ERATE=0.0003;THETA=0.0012;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 105172911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1583;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0006;THETA=0.0021;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 105173004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8266;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105173028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1906;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 105173116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4930;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173137 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105173167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105173206 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8687;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 105173237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105173292 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173298 . TCAC T 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5645;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105173300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4853;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3403;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0007;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 105173621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8951;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105173835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105173884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105173940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105174014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 105174113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9984;RSQ=0.9334;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105174119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8530;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105174145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105174187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8753;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105174298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105174323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105174342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105174423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9598;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105174430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8680;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0002;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 105174561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 105174613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105174630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105174728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105174736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5438;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105174824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7636;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105174854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.8051;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105174902 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5493;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105174909 . A AT 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7954;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105174963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3524;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 105175147 rs66478761 TTAACA T 42987 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3467;AVGPOST=0.9847;RSQ=0.9769;ERATE=0.0025;THETA=0.0006;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 105175257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0090;AVGPOST=0.9982;RSQ=0.9172;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105175286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105175461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.894;LDAF=0.0189;AVGPOST=0.9959;RSQ=0.9133;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105175544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1220;AVGPOST=0.9971;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 105175597 . TTC T 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4888;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105175600 . AT A 320 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.7127;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105175681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3217;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 105175688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.3385;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105175708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105175791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105175878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6923;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105175947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1210;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 105175984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9839;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105176211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4253;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105176214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0241;AVGPOST=0.9993;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 105176259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 105176309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105176406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5804;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105176452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9237;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105176495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105176517 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105176567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6270;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105176573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105176720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7717;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105176768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.6052;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105176925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3074;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0005;THETA=0.0002;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 105176931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8161;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 105176997 . CT C 393 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105177040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105177056 . T TA 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8179;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105177075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7930;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105177120 . CTAAA C 338 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105177143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4862;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 105177257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9767;ERATE=0.0006;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105177289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.6305;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105177328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105177367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0190;AVGPOST=0.9980;RSQ=0.9510;ERATE=0.0004;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 105177376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9682;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105177424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105177449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9051;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105177554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105177571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0242;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 105177632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105177638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9661;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105177677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105177714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105177730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105177731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9659;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105177762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5295;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105177799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105177811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6575;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105177847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8093;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105177964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105178003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.9003;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105178004 . A AT 1908 PASS INDEL;BAVGPOST=0.935;BRSQ=0.856;LDAF=0.2598;AVGPOST=0.9375;RSQ=0.8934;ERATE=0.0008;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 105178019 rs34499071 T TA 38149 PASS INDEL;BAVGPOST=0.985;BRSQ=0.978;LDAF=0.3099;AVGPOST=0.9917;RSQ=0.9867;ERATE=0.0004;THETA=0.0001;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 105178022 . ACT A 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178033 . GTT G 151 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4395;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178062 . ATTAT A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3958;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.954;LDAF=0.3870;AVGPOST=0.9750;RSQ=0.9621;ERATE=0.0011;THETA=0.0009;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 105178300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3067;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105178563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178638 . CT C 6107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0469;AVGPOST=0.9979;RSQ=0.9784;ERATE=0.0006;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 105178740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105178760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8336;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105178797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105179100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8663;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105179204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105179324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105179360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105179364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9044;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1975;AN=2184 GT:DS:GL:BD 0.90430403 1
1 105179457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9427;AVGPOST=0.9990;RSQ=0.9930;ERATE=0.0003;THETA=0.0019;AC=2059;AN=2184 GT:DS:GL:BD 0.94276559 1
1 105179497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105179608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9441;AVGPOST=0.9984;RSQ=0.9883;ERATE=0.0004;THETA=0.0006;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 105179620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105179633 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8070;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105179643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8621;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105179749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105179774 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0244;AVGPOST=0.9984;RSQ=0.9738;ERATE=0.0003;THETA=0.0015;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 105179880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105179896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105179907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105180045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105180051 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105180461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8942;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105180576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9582;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 105180598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.946;LDAF=0.1045;AVGPOST=0.9842;RSQ=0.9490;ERATE=0.0004;THETA=0.0023;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 105180719 . TA T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.4846;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105180772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0969;AVGPOST=0.9940;RSQ=0.9738;ERATE=0.0004;THETA=0.0039;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 105180789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9652;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105180795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105180836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9499;ERATE=0.0003;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105180839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8914;ERATE=0.0004;THETA=0.0024;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105180932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7201;ERATE=0.0009;THETA=0.0046;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105180994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.908;LDAF=0.9090;AVGPOST=0.9721;RSQ=0.8686;ERATE=0.0035;THETA=0.0013;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 105181010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8908;ERATE=0.0003;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105181272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0068;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105181436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0292;AVGPOST=0.9976;RSQ=0.9676;ERATE=0.0004;THETA=0.0012;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 105181471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0090;AVGPOST=0.9971;RSQ=0.8602;ERATE=0.0003;THETA=0.0145;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105181481 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105181501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0299;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0004;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 105181529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105181536 . TG T 4113 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0412;AVGPOST=0.9953;RSQ=0.9571;ERATE=0.0004;THETA=0.0035;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 105181537 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8677;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105181583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0101;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 105181767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105181778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5917;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105181810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105182038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0003;THETA=0.0077;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105182088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105182114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9505;ERATE=0.0003;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105182150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105182199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105182250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105182364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.657;LDAF=0.0052;AVGPOST=0.9966;RSQ=0.7606;ERATE=0.0010;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105182388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105182551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7264;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105182619 . GTT G 1011 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9471;ERATE=0.0003;THETA=0.0039;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105182661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105182716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6055;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105182721 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.715;LDAF=0.0145;AVGPOST=0.9877;RSQ=0.6509;ERATE=0.0006;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105182870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.688;LDAF=0.0750;AVGPOST=0.9543;RSQ=0.7432;ERATE=0.0032;THETA=0.0031;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 105182873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.886;BRSQ=0.508;LDAF=0.8471;AVGPOST=0.8548;RSQ=0.5402;ERATE=0.0388;THETA=0.0066;AC=1943;AN=2184 GT:DS:GL:BD 0.88965201 1
1 105182891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.774;LDAF=0.0668;AVGPOST=0.9657;RSQ=0.8011;ERATE=0.0019;THETA=0.0076;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 105182903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8545;ERATE=0.0005;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105182986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105183051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0063;AVGPOST=0.9970;RSQ=0.8031;ERATE=0.0004;THETA=0.0088;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105183067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0366;AVGPOST=0.9984;RSQ=0.9814;ERATE=0.0004;THETA=0.0039;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 105183098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7192;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105183174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105183194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9240;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105183249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9550;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105183258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.882;LDAF=0.4107;AVGPOST=0.9545;RSQ=0.9330;ERATE=0.0050;THETA=0.0007;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 105183325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0076;AVGPOST=0.9926;RSQ=0.5941;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105183335 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.9699;AVGPOST=0.9872;RSQ=0.8403;ERATE=0.0007;THETA=0.0002;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 105183349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9494;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105183396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9596;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105183429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3734;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 105183638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105183734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8627;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105183839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105183844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105183978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0559;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0010;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 105184033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0558;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 105184052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9418;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105184184 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105184214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3675;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 105184215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184327 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105184473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3669;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 105184556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184721 . AC A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4636;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105184746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6613;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105184780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8377;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105184871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2601;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 105185011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105185014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105185073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7075;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105185089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 105185125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6162;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105185267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105185299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0487;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0009;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 105185303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105185422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105185463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9369;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105185512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0150;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105185520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0339;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 105185545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105185549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0340;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 105185630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105185752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105185775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3452;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105185842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105185867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6378;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105185932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105185961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9714;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 105185980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4306;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 105186038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105186063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8917;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105186066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8050;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105186069 . C CA 1085 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9972;RSQ=0.8578;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105186102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5804;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5970;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4438;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 105186425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3671;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 105186472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 105186568 . A ATTT 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4911;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4430;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 105186688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8395;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105186801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186863 . GA G 273 PASS INDEL;BAVGPOST=0.983;BRSQ=0.592;LDAF=0.0354;AVGPOST=0.9578;RSQ=0.5218;ERATE=0.0089;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 105186946 . GA G 274 PASS INDEL;BAVGPOST=0.982;BRSQ=0.603;LDAF=0.0444;AVGPOST=0.9494;RSQ=0.5358;ERATE=0.0109;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 105186950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6377;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105186964 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105187118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2600;AVGPOST=0.9976;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 105187440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7861;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105187508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105187545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105187647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105187690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105187699 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105187739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3669;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0009;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 105187766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4438;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0005;THETA=0.0026;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 105187906 rs75609172 G GA 38683 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4426;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0008;THETA=0.0008;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 105188064 . A AG 1858 PASS INDEL;BAVGPOST=0.880;BRSQ=0.766;LDAF=0.2852;AVGPOST=0.8738;RSQ=0.7935;ERATE=0.0116;THETA=0.0006;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 105188066 . A AG 2229 PASS INDEL;BAVGPOST=0.884;BRSQ=0.775;LDAF=0.2841;AVGPOST=0.8867;RSQ=0.8091;ERATE=0.0073;THETA=0.0003;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 105188070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105188249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9949;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 105188304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8455;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105188412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8592;ERATE=0.0014;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105188413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105188452 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105188659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105188873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8632;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105188931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105188965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8703;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105188996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105189037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7036;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105189149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105189186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105189267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105189329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105189396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105189461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105189553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9662;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 105189642 . C CT 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105189801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105189886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7764;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105190029 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7172;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105190067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0405;AVGPOST=0.9989;RSQ=0.9907;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 105190181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0172;AVGPOST=0.9974;RSQ=0.9378;ERATE=0.0006;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105190264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8406;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105190266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8053;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105190337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.5982;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105190342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0101;AVGPOST=0.9959;RSQ=0.8394;ERATE=0.0006;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105190436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 105190569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105190593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105190594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105190595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105190596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105190729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9758;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 105190804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105190830 . A AAGCAGT 1226 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8912;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105190898 . T TA 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6618;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105190929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7093;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105191035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9734;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 105191056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105191263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8003;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105191281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8853;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105191282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.964;LDAF=0.1845;AVGPOST=0.9886;RSQ=0.9735;ERATE=0.0005;THETA=0.0008;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 105191369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9470;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105191462 . A AT 4288 PASS INDEL;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0518;AVGPOST=0.9872;RSQ=0.9121;ERATE=0.0016;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 105191606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8789;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105191728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105191834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105191848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9551;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 105191935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0447;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 105191990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 105192208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4205;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105192334 MERGED_DEL_2_4291 AACCCAGGGAGAAGTTATAGGATCTAAGAAAACTAGTGACTCATAATTTAATAAATATATAAACAAACACAATCAAGTACAGATTGTAAAAAAAAAAAAAAAAGTTTCAAAAGAAAGCAAAAACAAACTCTGGGAACAACAAATTGGTATAGTTCAGTGGGTAGTTACAACATATTCTTGGAAGTGGTGT ATATGGCAAAAACACTGTTTAACCTTTTGAAGAAGAAGAAGAAGATGACGAAGAAGAAGACAAAAAATAAGGCAGGCAGCTTCAAATTCCCTGGTTCCAGCTCCAAAATAGAACA . . SV;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0004;THETA=0.0007;CIEND=-107;46;CIPOS=-119;38;END=90174189;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_90168987_90174065;EMB GT:DS:GL:BD 0.00366300 0
1 105192466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105192636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.474;LDAF=0.0044;AVGPOST=0.9958;RSQ=0.6427;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105192946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105193119 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9641;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 105193122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105193167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105193210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105193381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9171;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105193523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8709;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 105193590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1231;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0005;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 105193591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105193808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105193923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3061;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 105193950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9118;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105194043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105194081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8237;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105194186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 105194196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4569;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105194257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8973;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105194378 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105194513 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 105194537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105194552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105194559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1253;AVGPOST=0.9969;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 105194583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9992;RSQ=0.9780;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 105194618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3072;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 105194637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9232;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105194657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105194731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3307;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0010;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 105194752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3105;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 105194791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105194927 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5158;AVGPOST=0.9936;RSQ=0.9909;ERATE=0.0003;THETA=0.0008;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 105195067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105195102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.882;LDAF=0.0222;AVGPOST=0.9936;RSQ=0.8807;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 105195108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105195136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3312;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 105195137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105195195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.4468;AVGPOST=0.9803;RSQ=0.9705;ERATE=0.0044;THETA=0.0002;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 105195214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105195300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 105195316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105195424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3583;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0005;THETA=0.0007;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 105195754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6589;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105195988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7954;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105195998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105196031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3268;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0005;THETA=0.0012;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 105196036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3285;AVGPOST=0.9950;RSQ=0.9911;ERATE=0.0009;THETA=0.0016;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 105196049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105196156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105196244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6732;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105196362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3066;AVGPOST=0.9962;RSQ=0.9933;ERATE=0.0004;THETA=0.0007;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 105196431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0103;AVGPOST=0.9959;RSQ=0.8450;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 105196650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105196919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105196921 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105196948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3267;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0004;THETA=0.0010;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 105197119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.1019;AVGPOST=0.9943;RSQ=0.9752;ERATE=0.0006;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 105197219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6110;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105197355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9141;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105197460 rs35314217 TTTG T 6377 PASS INDEL;BAVGPOST=0.954;BRSQ=0.838;LDAF=0.1567;AVGPOST=0.9366;RSQ=0.8070;ERATE=0.0130;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 105197499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7162;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 105197655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7859;ERATE=0.0002;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105197750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7011;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105197757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105197785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105197786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105197862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4936;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105197902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105198064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3283;AVGPOST=0.9941;RSQ=0.9900;ERATE=0.0004;THETA=0.0089;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 105198108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8368;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105198114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6764;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105198375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105198454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105198681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9909;AVGPOST=0.9992;RSQ=0.9642;ERATE=0.0003;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 105198692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9912;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 105198742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0062;AVGPOST=0.9968;RSQ=0.8267;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 105198959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.806;LDAF=0.0172;AVGPOST=0.9939;RSQ=0.8684;ERATE=0.0005;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105199059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9769;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105199367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105199410 . CT C 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2091;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 105199464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105199568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7969;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105199642 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9912;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 105199665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105199686 . C CAT 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4542;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105199691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8088;AVGPOST=0.9975;RSQ=0.9943;ERATE=0.0005;THETA=0.0006;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 105199967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9754;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 105200032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6237;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9913;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 105200062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7491;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 105200161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8089;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 105200169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8087;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 105200189 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105200230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3394;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 105200289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105200316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8049;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 105200325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 105200371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105200376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6012;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105200444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8219;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 105200453 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9253;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105200709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1823;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0015;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 105200722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5168;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200749 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105200814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105200875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4632;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 105200972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.8859;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105200990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105201106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105201230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2743;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 105201281 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8669;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105201362 . AAATGT A 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105201374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105201389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 105201446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 105201780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8022;AVGPOST=0.9981;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=1756;AN=2184 GT:DS:GL:BD 0.80402929 1
1 105201893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 105202054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105202058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1729;AVGPOST=0.9981;RSQ=0.9946;ERATE=0.0006;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 105202220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.942;LDAF=0.1764;AVGPOST=0.9910;RSQ=0.9789;ERATE=0.0006;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 105202263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 105202376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3367;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 105202422 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8172;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 105202458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8615;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 105202460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4774;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105202494 . A AC 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5309;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105202515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105202605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 105202638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9977;RSQ=0.9487;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 105202862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.757;LDAF=0.9345;AVGPOST=0.9549;RSQ=0.7365;ERATE=0.0192;THETA=0.0006;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 105202882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 105202919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0019;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 105203078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4674;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 105203125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0