1092
10000
1 11429072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6376;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11429100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8720;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11429200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0045;AVGPOST=0.9966;RSQ=0.7284;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11429223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3848;AVGPOST=0.9954;RSQ=0.9922;ERATE=0.0005;THETA=0.0009;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 11429241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.763;LDAF=0.0154;AVGPOST=0.9914;RSQ=0.7965;ERATE=0.0003;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11429243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5775;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11429280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7550;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11429321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.5989;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11429520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11429584 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 11429594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.726;LDAF=0.0076;AVGPOST=0.9964;RSQ=0.8162;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11429642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8809;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11429705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11429751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6694;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11430047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11430112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11430127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11430158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9313;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11430185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11430221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11430248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9509;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11430285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11430422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8852;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11430613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8275;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11430625 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9779;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11430678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5521;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 11430721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7086;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11430748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.5027;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11430775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8000;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11430781 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2665;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 11430934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7307;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11430959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11431065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0199;AVGPOST=0.9991;RSQ=0.9804;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11431102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11431105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11431117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11431183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5506;AVGPOST=0.9959;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 11431254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0153;AVGPOST=0.9989;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11431311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9354;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11431442 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11431445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5518;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0007;THETA=0.0002;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 11431476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11431531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5523;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 11431552 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7341;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11431597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5428;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11431603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11431682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9316;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11431728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11431761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9226;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11431782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8856;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11431807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11431971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9311;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11432060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1641;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0005;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 11432071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11432137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11432141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5520;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 11432155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11432216 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9990;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11432435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11432497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7924;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11432507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7969;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11432530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11432584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11432780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5064;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11432838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7257;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11432853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11432859 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0121;AVGPOST=0.9949;RSQ=0.8313;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11432863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11432891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11432903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11433181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4310;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 11433199 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5537;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0005;THETA=0.0006;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 11433309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5533;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0006;THETA=0.0005;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 11433314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6574;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11433329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9222;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11433338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11433339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11433342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5500;AVGPOST=0.9899;RSQ=0.9869;ERATE=0.0025;THETA=0.0003;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 11433393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11433431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9791;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11433449 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9340;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11433547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0046;AVGPOST=0.9966;RSQ=0.7065;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11433607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.556;LDAF=0.0072;AVGPOST=0.9924;RSQ=0.5838;ERATE=0.0008;THETA=0.0036;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11433702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9459;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11433763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8272;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11433902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11433920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11433921 . C CT 6231 PASS INDEL;BAVGPOST=0.909;BRSQ=0.739;LDAF=0.2269;AVGPOST=0.8421;RSQ=0.6474;ERATE=0.0330;THETA=0.0008;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 11434128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8946;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11434279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6732;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11434294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2859;AVGPOST=0.9974;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 11434369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11434373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9986;AVGPOST=0.9994;RSQ=0.7897;ERATE=0.0003;THETA=0.0003;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 11434424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2787;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0007;THETA=0.0004;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 11434428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4800;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11434458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3237;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11434496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6344;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11434559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5535;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 11434572 rs34597074 GC G 18669 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2091;AVGPOST=0.9776;RSQ=0.9507;ERATE=0.0007;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 11434734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6814;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11434942 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8788;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11434956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1119;AVGPOST=0.9983;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 11434966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0002;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11435020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0138;AVGPOST=0.9979;RSQ=0.9324;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11435040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11435047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11435048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11435147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4884;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11435150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11435160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11435180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11435193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4457;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11435212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3254;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 11435354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11435390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9634;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11435521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9992;RSQ=0.9837;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11435537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11435544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11435672 . CACAT C 1366 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8778;ERATE=0.0019;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11435811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2875;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 11435867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2874;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 11435886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2699;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 11435972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8791;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11435989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2880;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0006;THETA=0.0006;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 11436030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2873;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 11436072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3048;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 11436083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9148;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11436084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8960;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11436132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11436217 . CAG C 320 PASS INDEL;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.8962;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9999;RSQ=0.9861;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11436357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9283;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11436413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11436418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9250;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11436592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2869;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 11436704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11436781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3799;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11436792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6723;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11436795 . C CT 478 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9380;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0412;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11436805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8891;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11436823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11436853 . ATACT A 763 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11436902 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7335;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11436920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11436991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8843;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11437039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11437093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5157;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11437339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5021;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11437376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11437377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9203;ERATE=0.0004;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11437492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8459;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11437514 . ATTT A 3115 PASS INDEL;BAVGPOST=0.984;BRSQ=0.933;LDAF=0.1444;AVGPOST=0.9877;RSQ=0.9632;ERATE=0.0004;THETA=0.0007;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 11437587 rs67029619 TTTG T 14531 PASS INDEL;BAVGPOST=0.984;BRSQ=0.936;LDAF=0.1460;AVGPOST=0.9886;RSQ=0.9659;ERATE=0.0004;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 11437589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9141;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11437610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11437625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5681;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11437661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4895;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11437669 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11437761 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11437861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8392;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11437888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11437890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11437927 . C CA 1810 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0165;AVGPOST=0.9990;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11437956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9674;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11438109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9797;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11438182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11438203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.5175;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11438210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0175;AVGPOST=0.9964;RSQ=0.9225;ERATE=0.0003;THETA=0.0016;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11438212 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7991;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11438215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8652;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11438241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8520;ERATE=0.0002;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11438282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11438283 . CT C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11438318 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11438375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11438520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11438582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11438629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11438774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9257;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11438830 . T TAC 337 PASS INDEL;BAVGPOST=0.952;BRSQ=0.468;LDAF=0.1153;AVGPOST=0.8647;RSQ=0.4883;ERATE=0.0203;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 11438908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.805;LDAF=0.2348;AVGPOST=0.9119;RSQ=0.7986;ERATE=0.0227;THETA=0.0005;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 11438912 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.3358;AVGPOST=0.9615;RSQ=0.9354;ERATE=0.0092;THETA=0.0009;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 11438921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0100;AVGPOST=0.9974;RSQ=0.9020;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11438966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11438973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5101;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11438998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11439105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11439119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11439171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11439274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11439282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11439308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11439327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11439415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9152;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11439424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9395;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11439425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11439438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11439450 . C CT 592 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11439453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0002;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11439482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3242;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0005;THETA=0.0005;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 11439507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0143;AVGPOST=0.9984;RSQ=0.9497;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11439695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8364;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11439729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11439859 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11440013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7144;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11440160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1064;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 11440258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0085;AVGPOST=0.9966;RSQ=0.8572;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11440325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11440341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11440397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8234;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11440535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1775;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0004;THETA=0.0015;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 11440538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0431;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11440561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3941;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0005;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 11440692 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9653;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11440796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1523;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0003;THETA=0.0020;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 11440814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8213;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11440815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3928;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0006;THETA=0.0002;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 11440949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9534;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11441191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0291;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 11441254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11441286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8955;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11441302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7088;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11441453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11441545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8517;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11441563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1842;AVGPOST=0.9951;RSQ=0.9882;ERATE=0.0007;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 11441579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0377;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11441823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11441893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11441949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11441958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4019;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 11442002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11442034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0379;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11442053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.9014;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11442110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8112;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11442114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4035;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0008;THETA=0.0004;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 11442156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8089;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11442309 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11442405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7088;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11442435 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11442485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8175;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11442550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7952;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11442574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4073;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0005;THETA=0.0001;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 11442578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8626;ERATE=0.0003;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11442637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0123;AVGPOST=0.9981;RSQ=0.9302;ERATE=0.0003;THETA=0.0043;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11442702 . TG T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11442908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11442927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11443014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11443024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1380;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0012;THETA=0.0002;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 11443033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1229;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11443041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11443046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11443077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0048;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11443138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9751;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11443250 . TTA T 4561 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0260;AVGPOST=0.9956;RSQ=0.9387;ERATE=0.0005;THETA=0.0066;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11443273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11443300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11443360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1677;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 11443449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6965;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11443466 . AG A 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11443648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6197;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11443704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6727;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11443767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7340;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11443773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2561;AVGPOST=0.9964;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 11443815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9386;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11443852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0507;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 11443884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0484;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11443901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0382;AVGPOST=0.9990;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11444352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11444492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11444532 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9469;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11444588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0181;AVGPOST=0.9974;RSQ=0.9529;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11444665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4991;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11444750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.7104;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11444788 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11444847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.841;LDAF=0.0133;AVGPOST=0.9966;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11444961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8684;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11444962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4255;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11444980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0458;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11445102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9524;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11445126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4257;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11445159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11445350 rs4026714 CATA C 55946 PASS INDEL;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4230;AVGPOST=0.9911;RSQ=0.9876;ERATE=0.0025;THETA=0.0008;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 11445360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4564;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11445615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4257;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11445638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11445860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.9005;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11445871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11445947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5576;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11446043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4254;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11446061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8311;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11446065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7280;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11446153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7895;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11446165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11446241 . A AT 667 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9435;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11446250 . ATTATCT A 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6489;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11446255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6827;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11446286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11446468 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5035;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11446724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4661;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11446810 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0046;AVGPOST=0.9962;RSQ=0.6617;ERATE=0.0012;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11446866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11446945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7770;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11447044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0462;AVGPOST=0.9975;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 11447115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11447215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11447261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9223;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11447386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11447454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11447456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4259;AVGPOST=0.9962;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11447581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11447606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6079;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11447784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3262;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 11447869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11447888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11448026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11448130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4983;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11448165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.924;LDAF=0.8265;AVGPOST=0.9750;RSQ=0.9363;ERATE=0.0056;THETA=0.0005;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 11448175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0311;AVGPOST=0.9935;RSQ=0.9236;ERATE=0.0013;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 11448320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0229;AVGPOST=0.9973;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11448325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6861;ERATE=0.0009;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11448329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11448412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11448475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8451;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11448523 . C CT 263 PASS INDEL;BAVGPOST=0.952;BRSQ=0.458;LDAF=0.0715;AVGPOST=0.9083;RSQ=0.4269;ERATE=0.0212;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11448558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11448560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0006;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11448570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11448641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11448699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11448790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0456;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11448822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0459;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0004;THETA=0.0012;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11448846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11448861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6979;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11448918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4626;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11448930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11449089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0274;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11449126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4943;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11449159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0458;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11449165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11449296 . C CT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5014;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11449331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3256;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0005;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 11449372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3887;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 11449393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9290;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11449605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11449633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11449658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11449671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11449674 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11449847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11449932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9148;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11450062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7679;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11450319 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7181;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11450388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2515;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 11450406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.8288;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11450532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0344;AVGPOST=0.9979;RSQ=0.9748;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11450583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11450767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11450801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6560;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11450899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8678;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11450906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1338;AVGPOST=0.9983;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 11450936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8973;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11451140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11451295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11451296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11451493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4708;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 11451495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8476;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11451496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9667;AVGPOST=0.9988;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 11451581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7700;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11451703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11451796 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11451821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4283;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0008;THETA=0.0002;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 11451951 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11452253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11452342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6765;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11452389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11452441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11452524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11452555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11452608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7540;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11452706 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0114;AVGPOST=0.9959;RSQ=0.8486;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11452772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9218;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11453206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11453237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11453275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0696;AVGPOST=0.9947;RSQ=0.9712;ERATE=0.0004;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 11453362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0694;AVGPOST=0.9940;RSQ=0.9690;ERATE=0.0008;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 11453363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0183;AVGPOST=0.9988;RSQ=0.9720;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11453498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9498;ERATE=0.0003;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11453565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11453717 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11453750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1621;AVGPOST=0.9970;RSQ=0.9910;ERATE=0.0004;THETA=0.0013;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 11453758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6111;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11453843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7787;ERATE=0.0004;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11453874 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11454196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0429;AVGPOST=0.9986;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11454257 rs10634645 TTATG T 5888 PASS INDEL;BAVGPOST=0.769;BRSQ=0.539;LDAF=0.3374;AVGPOST=0.7723;RSQ=0.5760;ERATE=0.0727;THETA=0.0005;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 11454265 rs55665987 G GTATGTATGTAT 214667 PASS INDEL;BAVGPOST=0.958;BRSQ=0.930;LDAF=0.6894;AVGPOST=0.9362;RSQ=0.8998;ERATE=0.0198;THETA=0.0004;AC=1532;AN=2184 GT:DS:GL:BD 0.70146519 1
1 11454273 . CAG C 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5922;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.626;LDAF=0.0133;AVGPOST=0.9868;RSQ=0.6274;ERATE=0.0023;THETA=0.0032;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11454331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.706;LDAF=0.0136;AVGPOST=0.9890;RSQ=0.6763;ERATE=0.0008;THETA=0.0075;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11454426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8629;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11454436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.756;LDAF=0.0211;AVGPOST=0.9828;RSQ=0.6698;ERATE=0.0016;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11454468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.510;LDAF=0.0046;AVGPOST=0.9932;RSQ=0.3596;ERATE=0.0010;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11454479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.901;LDAF=0.0270;AVGPOST=0.9873;RSQ=0.8315;ERATE=0.0018;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11454484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0122;AVGPOST=0.9920;RSQ=0.7477;ERATE=0.0006;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11454499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1075;AVGPOST=0.9798;RSQ=0.9246;ERATE=0.0006;THETA=0.0020;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 11454501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0039;AVGPOST=0.9939;RSQ=0.4615;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11454546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5977;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11454557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0191;AVGPOST=0.9963;RSQ=0.9223;ERATE=0.0004;THETA=0.0015;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11454568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11454572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.967;LDAF=0.4241;AVGPOST=0.9703;RSQ=0.9588;ERATE=0.0048;THETA=0.0006;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 11454573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7809;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11454711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11454725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7313;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11454728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5979;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11454917 . C CA 77 PASS INDEL;BAVGPOST=0.996;BRSQ=0.607;LDAF=0.0149;AVGPOST=0.9809;RSQ=0.5039;ERATE=0.0035;THETA=0.0104;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11455042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9980;RSQ=0.9431;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11455277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.9888;AVGPOST=0.9994;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 11455478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6382;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11455479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5760;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11455546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7582;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11455654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11455676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1171;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11455823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11455917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1175;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11455919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11455983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0285;AVGPOST=0.9968;RSQ=0.9534;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11455987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9511;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11456116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11456205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2490;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 11456206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11456259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4893;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11456276 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6597;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11456304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1769;AVGPOST=0.9968;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 11456352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11456365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11456499 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8075;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11456578 . A AT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11456660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0070;AVGPOST=0.9972;RSQ=0.8562;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11456702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11456884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11456885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7852;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11456889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0804;AVGPOST=0.9987;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 11456891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11457082 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11457084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1170;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11457174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1171;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11457179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11457187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4695;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 11457210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1171;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11457299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11457381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5246;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11457403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11457489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11457549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11457560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11457578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1518;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 11457594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6589;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0006;THETA=0.0002;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 11457677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0358;AVGPOST=0.9991;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11457678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11457696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.7113;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11457719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11457723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6226;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0006;THETA=0.0002;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 11457768 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11457772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0806;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 11457807 . G GT 449 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8348;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11457808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 11457982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11458042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6246;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11458075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11458142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11458147 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6293;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11458151 . C CT 239 PASS INDEL;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7264;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11458304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0252;AVGPOST=0.9992;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11458318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11458327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0820;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 11458371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6589;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0005;THETA=0.0004;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 11458387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11458399 . G GA 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7018;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11458506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11458545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6246;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11458547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6216;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 11458573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11458768 MERGED_DEL_2_4693 GACCTTATTTGATTTTCACACATTTTTTTCCTATGTGTTCTTTTTCTGTCTGGCATCCTATCCAGAGTCATATACTGTTTTTGTTTTCCTTTCTTAGTCATTTCCAGTCGGCAACAGTTCTTCAATTTTTTCCTTATCTTTCATGACTTGACACTTGGAAGATTGTTAATCAGCCATTTTGTAGAATGCC G . . SV;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0009;CIEND=-111;42;CIPOS=-121;36;END=111477713;HOMLEN=4;HOMSEQ=ACCT;SOURCE=BreakDancer_111472667_11147 GT:DS:GL:BD 0.00228938 0
1 11458847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8103;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11458919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1517;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0004;THETA=0.0001;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 11458955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8732;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11458956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11459056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11459221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11459262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11459287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11459428 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4706;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 11459469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0790;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0024;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 11459542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0792;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 11459599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11459666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0178;AVGPOST=0.9988;RSQ=0.9702;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11459683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11459915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7081;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11459975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6749;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11460009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8764;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11460017 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11460186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0791;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 11460211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5924;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11460212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11460240 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4581;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11460260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11460263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11460266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11460306 . TCA T 882 PASS INDEL;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8935;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11460307 rs34115852 C CA 5152 PASS INDEL;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0254;AVGPOST=0.9971;RSQ=0.9569;ERATE=0.0003;THETA=0.0017;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11460353 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11460448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9319;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11460510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11460662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.9994;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0003;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 11460688 . AC A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11460792 . G GC 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11460829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7277;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11460876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11460977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11460989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6448;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11461085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5391;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11461207 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0750;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 11461250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8330;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11461374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4782;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11461519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11461530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8535;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11461682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2252;AVGPOST=0.9965;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 11461726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11461727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0208;AVGPOST=0.9959;RSQ=0.9186;ERATE=0.0004;THETA=0.0022;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11461732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11461777 . CT C 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5009;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11461856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11462020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11462234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11462292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11462416 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1415;AVGPOST=0.9970;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 11462607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4413;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11462690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7825;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11462841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.668;LDAF=0.1750;AVGPOST=0.9362;RSQ=0.8427;ERATE=0.0040;THETA=0.0003;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 11463667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.862;LDAF=0.3971;AVGPOST=0.8712;RSQ=0.8036;ERATE=0.0098;THETA=0.0003;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 11463746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0070;AVGPOST=0.9973;RSQ=0.8353;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11463872 . CGT C 18512 PASS INDEL;BAVGPOST=0.926;BRSQ=0.265;LDAF=0.8721;AVGPOST=0.8247;RSQ=0.3668;ERATE=0.0211;THETA=0.0060;AC=2023;AN=2184 GT:DS:GL:BD 0.92628205 1
1 11463930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0226;AVGPOST=0.9953;RSQ=0.9155;ERATE=0.0007;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11464178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0233;AVGPOST=0.9970;RSQ=0.9480;ERATE=0.0003;THETA=0.0061;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11464501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0557;AVGPOST=0.9971;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 11464620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.8903;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11464625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.771;LDAF=0.0275;AVGPOST=0.9910;RSQ=0.8717;ERATE=0.0005;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11464749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.0856;AVGPOST=0.9937;RSQ=0.9705;ERATE=0.0007;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 11464828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.957;LDAF=0.0496;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0004;THETA=0.0012;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 11464846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8641;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11464900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4978;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11465061 rs3036780 TGAA T 31249 PASS INDEL;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.2835;AVGPOST=0.9806;RSQ=0.9685;ERATE=0.0009;THETA=0.0012;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 11465078 rs112603290 T TG 16298 PASS INDEL;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.2378;AVGPOST=0.9888;RSQ=0.9774;ERATE=0.0017;THETA=0.0012;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 11465117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0296;AVGPOST=0.9984;RSQ=0.9796;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11465169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11465234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5552;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11465255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0654;AVGPOST=0.9981;RSQ=0.9883;ERATE=0.0005;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 11465386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.9633;AVGPOST=0.9977;RSQ=0.9734;ERATE=0.0004;THETA=0.0005;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 11465471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4410;AVGPOST=0.9955;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 11465480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0049;AVGPOST=0.9959;RSQ=0.6980;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11465616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7688;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11465705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.839;LDAF=0.0177;AVGPOST=0.9944;RSQ=0.8700;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11465711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11465762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11465817 . TCAG T 189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7356;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11465913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11466130 . TAA T 3849 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11466353 . TA T 5691 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0360;AVGPOST=0.9977;RSQ=0.9788;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 11466373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.4568;AVGPOST=0.9854;RSQ=0.9783;ERATE=0.0021;THETA=0.0005;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 11466507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.644;LDAF=0.9037;AVGPOST=0.9026;RSQ=0.5839;ERATE=0.0103;THETA=0.0007;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 11466736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11466851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6821;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11466909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0747;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11466932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8335;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11466966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.797;LDAF=0.0074;AVGPOST=0.9962;RSQ=0.8143;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11467051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0458;AVGPOST=0.9984;RSQ=0.9840;ERATE=0.0005;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 11467110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4138;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11467136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.518;LDAF=0.0186;AVGPOST=0.9776;RSQ=0.5196;ERATE=0.0056;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11467151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5818;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11467201 . GC G 82 PASS INDEL;BAVGPOST=0.971;BRSQ=0.108;LDAF=0.1394;AVGPOST=0.8040;RSQ=0.3548;ERATE=0.0090;THETA=0.0008;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 11467367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.964;LDAF=0.3928;AVGPOST=0.9833;RSQ=0.9731;ERATE=0.0014;THETA=0.0004;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 11467386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0048;AVGPOST=0.9921;RSQ=0.3860;ERATE=0.0009;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11467418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4320;AVGPOST=0.9789;RSQ=0.9719;ERATE=0.0031;THETA=0.0008;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 11467441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.989;LDAF=0.4860;AVGPOST=0.9941;RSQ=0.9919;ERATE=0.0004;THETA=0.0007;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 11467501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7670;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11467505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11467591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9492;ERATE=0.0003;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11467623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11467727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7079;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11467739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4329;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 11467811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4420;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11467952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.812;LDAF=0.4762;AVGPOST=0.9350;RSQ=0.9038;ERATE=0.0035;THETA=0.0007;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 11468030 . AAC A 1582 PASS INDEL;BAVGPOST=0.739;BRSQ=0.346;LDAF=0.2374;AVGPOST=0.7972;RSQ=0.5799;ERATE=0.0115;THETA=0.0004;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 11468060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.949;LDAF=0.4082;AVGPOST=0.9402;RSQ=0.9167;ERATE=0.0176;THETA=0.0006;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 11468256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9642;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 11468352 . CATT C 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8884;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11468375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0127;AVGPOST=0.9963;RSQ=0.8745;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11468415 rs112208151 A AT 1718 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11468482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.957;LDAF=0.0926;AVGPOST=0.9888;RSQ=0.9524;ERATE=0.0004;THETA=0.0013;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 11468552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9605;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11468561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4313;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11468580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5053;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0011;THETA=0.0004;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 11468708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4591;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11468750 . GA G 4056 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11468804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.329;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4324;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11468906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7432;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11468973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11468992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7414;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11469147 . GA G 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6392;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11469251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7821;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11469280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5056;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0004;THETA=0.0011;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 11469607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9646;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 11469614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8555;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11469647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11469737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8357;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11469763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.9160;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11470105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11470237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0251;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11470270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11470339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11470420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4334;AVGPOST=0.9952;RSQ=0.9921;ERATE=0.0013;THETA=0.0002;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 11470536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4747;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8796;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11470633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11470683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8933;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11470848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11470876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4320;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 11471064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11471101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11471125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4306;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0006;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 11471143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0782;AVGPOST=0.9958;RSQ=0.9781;ERATE=0.0006;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 11471387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.3966;AVGPOST=0.9903;RSQ=0.9828;ERATE=0.0019;THETA=0.0006;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 11471389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8983;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11471445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3928;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11471448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7704;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11471476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4815;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11471546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0177;AVGPOST=0.9963;RSQ=0.9158;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11471573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6104;ERATE=0.0008;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11471591 . C CAG 2653 PASS INDEL;BAVGPOST=0.971;BRSQ=0.820;LDAF=0.0734;AVGPOST=0.9763;RSQ=0.8932;ERATE=0.0015;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 11471632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.482;LDAF=0.0032;AVGPOST=0.9945;RSQ=0.3149;ERATE=0.0006;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11471669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11471687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9423;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11471722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3995;AVGPOST=0.9933;RSQ=0.9889;ERATE=0.0006;THETA=0.0009;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 11471828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11471893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.1083;AVGPOST=0.9938;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11471917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.1081;AVGPOST=0.9931;RSQ=0.9733;ERATE=0.0004;THETA=0.0100;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11471921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0007;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11471947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4197;AVGPOST=0.9903;RSQ=0.9859;ERATE=0.0003;THETA=0.0016;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 11471979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.4207;AVGPOST=0.9891;RSQ=0.9839;ERATE=0.0003;THETA=0.0288;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 11471981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0299;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11472029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11472159 . AAAAT A 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11472164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8617;ERATE=0.0003;THETA=0.0107;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11472396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8692;ERATE=0.0006;THETA=0.0282;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11472433 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0165;AVGPOST=0.9960;RSQ=0.8976;ERATE=0.0009;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11472475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.933;LDAF=0.0510;AVGPOST=0.9910;RSQ=0.9297;ERATE=0.0024;THETA=0.0095;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 11472554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.579;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5990;ERATE=0.0005;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11472557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.621;LDAF=0.0055;AVGPOST=0.9958;RSQ=0.6773;ERATE=0.0015;THETA=0.0116;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11472586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0133;AVGPOST=0.9962;RSQ=0.8894;ERATE=0.0004;THETA=0.0209;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11472609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11472628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.900;LDAF=0.7606;AVGPOST=0.9574;RSQ=0.9106;ERATE=0.0039;THETA=0.0050;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 11472709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0224;AVGPOST=0.9983;RSQ=0.9697;ERATE=0.0014;THETA=0.0070;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11472757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7563;ERATE=0.0009;THETA=0.0126;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11472796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9477;ERATE=0.0003;THETA=0.0201;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11472804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8397;ERATE=0.0005;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11472847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11472898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0357;AVGPOST=0.9971;RSQ=0.9668;ERATE=0.0003;THETA=0.0116;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11472926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0175;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11473056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8101;ERATE=0.0011;THETA=0.0117;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11473167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11473213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4551;AVGPOST=0.9927;RSQ=0.9893;ERATE=0.0009;THETA=0.0020;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 11473306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8188;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11473374 rs68080807 AAGAACCT A 73914 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5090;AVGPOST=0.9863;RSQ=0.9794;ERATE=0.0025;THETA=0.0004;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 11473444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11473489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5067;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 11473542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11473554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4907;AVGPOST=0.9943;RSQ=0.9920;ERATE=0.0007;THETA=0.0009;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 11473664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11473813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9242;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11473827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4996;AVGPOST=0.9976;RSQ=0.9964;ERATE=0.0003;THETA=0.0031;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 11473863 . T TGCGC 2503 PASS INDEL;BAVGPOST=0.791;BRSQ=0.530;LDAF=0.2704;AVGPOST=0.8083;RSQ=0.6234;ERATE=0.0265;THETA=0.0029;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 11474084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.758;LDAF=0.2895;AVGPOST=0.8658;RSQ=0.7209;ERATE=0.0375;THETA=0.0006;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 11474086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0469;AVGPOST=0.9980;RSQ=0.9865;ERATE=0.0003;THETA=0.0018;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 11474152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11474212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11474256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11474319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11474335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0121;AVGPOST=0.9975;RSQ=0.9216;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11474389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4877;AVGPOST=0.9935;RSQ=0.9900;ERATE=0.0008;THETA=0.0005;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 11474443 rs60036991 TC T 26757 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4354;AVGPOST=0.9883;RSQ=0.9825;ERATE=0.0015;THETA=0.0002;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 11474460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4359;AVGPOST=0.9924;RSQ=0.9889;ERATE=0.0003;THETA=0.0027;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 11474489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4348;AVGPOST=0.9933;RSQ=0.9901;ERATE=0.0005;THETA=0.0038;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 11474496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6886;AVGPOST=0.9927;RSQ=0.9878;ERATE=0.0004;THETA=0.0003;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 11474544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.6795;AVGPOST=0.9860;RSQ=0.9776;ERATE=0.0023;THETA=0.0040;AC=1485;AN=2184 GT:DS:GL:BD 0.67994505 1
1 11474552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.809;LDAF=0.0145;AVGPOST=0.9934;RSQ=0.8216;ERATE=0.0004;THETA=0.0058;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11474575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.6940;AVGPOST=0.9895;RSQ=0.9834;ERATE=0.0007;THETA=0.0008;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 11474650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7286;AVGPOST=0.9965;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 11474679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0077;AVGPOST=0.9987;RSQ=0.9341;ERATE=0.0005;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11474734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9550;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11474776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11474845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6164;ERATE=0.0004;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11474858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11474860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.8058;AVGPOST=0.9945;RSQ=0.9872;ERATE=0.0003;THETA=0.0007;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 11475027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4674;AVGPOST=0.9910;RSQ=0.9861;ERATE=0.0026;THETA=0.0009;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 11475085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9837;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11475219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11475326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 11475560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11475613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11475710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5291;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 11475863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9426;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11475928 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5013;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11476087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2523;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 11476160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9160;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11476314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9835;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11476358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0335;AVGPOST=0.9979;RSQ=0.9732;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11476454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7812;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 11476455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7810;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 11476521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5289;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0002;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 11476534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11476552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9606;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11476576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7815;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0006;THETA=0.0005;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 11476634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5661;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11476773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11476800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2805;AVGPOST=0.9962;RSQ=0.9923;ERATE=0.0005;THETA=0.0001;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 11476831 rs71716273 AAAT A 1314 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0186;AVGPOST=0.9911;RSQ=0.8293;ERATE=0.0010;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11476864 . TA T 163 PASS INDEL;BAVGPOST=0.880;BRSQ=0.145;LDAF=0.2036;AVGPOST=0.7085;RSQ=0.2552;ERATE=0.0255;THETA=0.0019;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 11477026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.785;BRSQ=0.611;LDAF=0.5916;AVGPOST=0.7730;RSQ=0.6283;ERATE=0.0214;THETA=0.0001;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 11477027 . AT A 522 PASS INDEL;BAVGPOST=0.995;BRSQ=0.754;LDAF=0.0622;AVGPOST=0.9286;RSQ=0.5283;ERATE=0.0053;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11477046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7091;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11477176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1886;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11477372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8846;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11477407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1885;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11477472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.0861;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0004;THETA=0.0024;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 11477530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11477577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11477581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0019;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11477824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0369;AVGPOST=0.9990;RSQ=0.9882;ERATE=0.0003;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11478147 . G GC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.8014;ERATE=0.0005;THETA=0.0048;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11478150 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4678;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478276 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4411;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4061;ERATE=0.0004;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1866;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0018;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 11478358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1867;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 11478484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2136;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 11478500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7242;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 11478696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6786;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11478703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11478818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0204;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11478900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3003;AVGPOST=0.9969;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 11478907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5507;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11478962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11478994 rs61277296 CAT C 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11479074 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11479100 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2391;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 11479537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6567;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11479652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6813;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11479662 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8814;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11479685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9074;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11479831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11479987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11479992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7203;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11480029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2456;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 11480057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2395;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 11480116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8866;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11480117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11480254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9327;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11480422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6809;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11480471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4008;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11480630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6700;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11480631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1821;AVGPOST=0.9971;RSQ=0.9930;ERATE=0.0004;THETA=0.0008;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 11480814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6235;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11480856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.622;LDAF=0.0409;AVGPOST=0.9569;RSQ=0.5774;ERATE=0.0137;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11480952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2374;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11481444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1206;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 11481657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11481672 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4537;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8363;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11481717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.7121;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11481731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11481830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2507;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 11481846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11481942 . ACT A 261 PASS INDEL;BAVGPOST=0.981;BRSQ=0.686;LDAF=0.0517;AVGPOST=0.9478;RSQ=0.5711;ERATE=0.0166;THETA=0.0025;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11481962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8163;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4017;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 11482102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6708;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11482222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7420;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.786;LDAF=0.0086;AVGPOST=0.9976;RSQ=0.8811;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11482375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 11482466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11482718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8634;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11482794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0042;AVGPOST=0.9965;RSQ=0.6696;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11482800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4027;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 11482823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8297;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11482835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7817;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11482880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0770;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 11482931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11482940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3125;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 11483003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11483057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11483092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11483102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8925;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11483154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11483165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0797;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 11483207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11483221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11483268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11483284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11483437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11483464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11483492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8527;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11483552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0057;AVGPOST=0.9963;RSQ=0.7694;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11483558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8707;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11483559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0017;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 11483576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11483662 . AG A 1922 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1184;AVGPOST=0.9932;RSQ=0.9788;ERATE=0.0005;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 11483682 rs71731660 GGC G 18087 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1199;AVGPOST=0.9948;RSQ=0.9843;ERATE=0.0005;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 11483683 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0667;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 11483707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4503;AVGPOST=0.9965;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 11483728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6487;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11483817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11483867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9061;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11483888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5914;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11484088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11484089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0051;AVGPOST=0.9971;RSQ=0.8044;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11484103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 11484214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7786;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11484350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4017;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 11484357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11484505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3099;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 11484589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11484677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3088;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 11484726 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11484837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9968;RSQ=0.8220;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11485015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.0282;AVGPOST=0.9958;RSQ=0.9448;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11485070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11485077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3878;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11485115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8848;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11485139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6630;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11485278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11485280 rs111434308 CA C 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11485307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11485402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3967;AVGPOST=0.9931;RSQ=0.9901;ERATE=0.0032;THETA=0.0004;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 11485406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3945;AVGPOST=0.9906;RSQ=0.9884;ERATE=0.0022;THETA=0.0026;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 11485454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11485578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11485616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1353;AVGPOST=0.9935;RSQ=0.9793;ERATE=0.0003;THETA=0.0013;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 11485827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11485828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7452;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11485868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5660;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11485923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0081;AVGPOST=0.9965;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11486121 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11486225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11486313 . T TG 16 PASS INDEL;BAVGPOST=0.997;BRSQ=0.682;LDAF=0.0109;AVGPOST=0.9872;RSQ=0.5605;ERATE=0.0020;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11486450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0193;AVGPOST=0.9984;RSQ=0.9679;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11486516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11486594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0139;AVGPOST=0.9991;RSQ=0.9751;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11486612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.9111;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11486714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9339;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11486952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11487025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7894;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11487059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11487076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11487204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11487425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7159;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11487431 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5587;AVGPOST=0.9901;RSQ=0.9862;ERATE=0.0013;THETA=0.0004;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 11487473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11487547 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4708;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11487561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9762;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11487635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0118;AVGPOST=0.9885;RSQ=0.6225;ERATE=0.0011;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11487725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0078;AVGPOST=0.9956;RSQ=0.7499;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11487809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.905;LDAF=0.0466;AVGPOST=0.9764;RSQ=0.7999;ERATE=0.0020;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 11487946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0561;AVGPOST=0.9914;RSQ=0.9407;ERATE=0.0007;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 11488119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11488174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.664;LDAF=0.0082;AVGPOST=0.9965;RSQ=0.8083;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11488218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8279;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11488289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1678;AVGPOST=0.9974;RSQ=0.9923;ERATE=0.0006;THETA=0.0002;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 11488294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8242;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11488322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8684;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11488412 . CA C 166 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5141;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11488455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11488586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11488597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9561;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11488699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11488723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11488874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1724;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 11488922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11489044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3732;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11489058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5545;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11489134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7296;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11489338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0073;AVGPOST=0.9986;RSQ=0.9346;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11489464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11489545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6276;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11489610 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11489653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7423;AVGPOST=0.9941;RSQ=0.9887;ERATE=0.0011;THETA=0.0016;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 11489703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11489731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11489924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11490356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11490368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11490417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11490454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9675;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11490483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11490531 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7437;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0006;THETA=0.0009;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 11490597 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11490715 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11490738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0106;AVGPOST=0.9983;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11490797 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5876;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11490924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2380;AVGPOST=0.9965;RSQ=0.9925;ERATE=0.0006;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11491014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2374;AVGPOST=0.9974;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11491043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7299;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11491127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4774;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11491165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2120;AVGPOST=0.9969;RSQ=0.9938;ERATE=0.0004;THETA=0.0008;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 11491209 . TA T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8778;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11491386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3581;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 11491427 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6144;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11491798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0073;AVGPOST=0.9966;RSQ=0.8344;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11491835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11492028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.782;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8946;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11492109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5853;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6765;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11492180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.867;LDAF=0.8663;AVGPOST=0.9379;RSQ=0.8017;ERATE=0.0137;THETA=0.0002;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 11492423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.885;LDAF=0.5642;AVGPOST=0.9017;RSQ=0.8445;ERATE=0.0415;THETA=0.0005;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 11492425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8733;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11492440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8812;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11492451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.713;LDAF=0.0129;AVGPOST=0.9918;RSQ=0.7537;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11492707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4091;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11492898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11492900 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0322;AVGPOST=0.9963;RSQ=0.9551;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11492921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11492932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11492988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11493039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11493063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8629;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11493073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0281;AVGPOST=0.9974;RSQ=0.9683;ERATE=0.0005;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11493176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11493284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7187;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11493328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11493378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11493441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11493484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7163;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11493593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11493678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11493773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11493818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 11493907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11493913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 11494033 rs59764345 A AT 18409 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2363;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11494040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.0787;ERATE=0.0004;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 11494201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9609;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11494230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11494326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0077;AVGPOST=0.9976;RSQ=0.8795;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11494357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11494492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11494695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11494824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11494856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11494919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8443;AVGPOST=0.9939;RSQ=0.9824;ERATE=0.0013;THETA=0.0004;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 11494952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11495031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7390;ERATE=0.0002;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11495097 . TG T 1305 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9662;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11495148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0394;AVGPOST=0.9979;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 11495261 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11495329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 11495505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11495556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9211;AVGPOST=0.9967;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 11495659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11495695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11495781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0011;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11495851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11495883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11495903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11496055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11496136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11496158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11496289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11496395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11496400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11496462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2693;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 11496469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2245;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 11496514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11496667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11496739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11496872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11496960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7153;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11497002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8527;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11497048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11497109 rs111299920 C CA 725 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9372;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11497135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0327;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 11497189 rs56751161 AG A 1949 PASS INDEL;BAVGPOST=0.991;BRSQ=0.905;LDAF=0.0378;AVGPOST=0.9911;RSQ=0.9143;ERATE=0.0007;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11497320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9532;ERATE=0.0003;THETA=0.0025;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11497468 . G GCTTTTT 9692 PASS INDEL;BAVGPOST=0.938;BRSQ=0.852;LDAF=0.2379;AVGPOST=0.9323;RSQ=0.8703;ERATE=0.0088;THETA=0.0005;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 11497488 . AAG A 330 PASS INDEL;BAVGPOST=0.972;BRSQ=0.616;LDAF=0.0621;AVGPOST=0.9310;RSQ=0.5112;ERATE=0.0178;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11497698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0177;AVGPOST=0.9961;RSQ=0.9037;ERATE=0.0004;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11497757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11497763 . GA G 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11497763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9991;RSQ=0.9715;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11497772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11497861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11497935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11498007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8168;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11498053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11498190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6771;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11498459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9747;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11498595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7202;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11498634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11498635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11498906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11499087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0112;AVGPOST=0.9972;RSQ=0.9012;ERATE=0.0008;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11499109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8342;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11499180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9600;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11499241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11499315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9248;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11499368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7770;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11499395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8388;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11499417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7527;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11499419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2682;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 11499427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6754;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11499448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8930;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11499637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.9977;AVGPOST=0.9969;RSQ=0.4555;ERATE=0.0005;THETA=0.0003;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 11499640 . T TTCCCATA 1076 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11499679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11499771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3662;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11499799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11499817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11499892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2691;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0009;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 11499893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8935;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11500007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9256;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11500200 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2363;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0005;THETA=0.0020;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 11500393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0018;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11500538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6957;AVGPOST=0.9963;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 11500567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1097;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 11500656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11500664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5977;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11500668 . A AT 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7340;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11500688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11500706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0954;AVGPOST=0.9982;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 11500724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11500728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11500780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6604;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11500847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11501032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0549;AVGPOST=0.9966;RSQ=0.9768;ERATE=0.0004;THETA=0.0011;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 11501075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6787;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11501186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5778;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11501227 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6723;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11501229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.401;LDAF=0.0177;AVGPOST=0.9799;RSQ=0.5514;ERATE=0.0021;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11501247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11501340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6594;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11501341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7107;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11501347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11501374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11501396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4032;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11501501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.5971;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11501630 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.731;LDAF=0.0130;AVGPOST=0.9918;RSQ=0.7478;ERATE=0.0009;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11501674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7438;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11501863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9220;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11501896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6209;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11501985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11502015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11502093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11502098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5795;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11502141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0687;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0006;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 11502188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0275;AVGPOST=0.9969;RSQ=0.9481;ERATE=0.0006;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11502349 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11502428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.3864;ERATE=0.0010;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11502506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0080;AVGPOST=0.9916;RSQ=0.6062;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11502518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6707;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11502547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0238;AVGPOST=0.9978;RSQ=0.9652;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11502655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9979;RSQ=0.9218;ERATE=0.0005;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11502711 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4662;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11502787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.666;LDAF=0.0081;AVGPOST=0.9929;RSQ=0.6739;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11502809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.669;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6613;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11502838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4762;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11502877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4832;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11502891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.907;LDAF=0.0720;AVGPOST=0.9803;RSQ=0.9006;ERATE=0.0009;THETA=0.0009;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 11502955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.8902;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11503254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3061;AVGPOST=0.9907;RSQ=0.9816;ERATE=0.0009;THETA=0.0006;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 11503262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0032;AVGPOST=0.9949;RSQ=0.3670;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11503268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.9128;AVGPOST=0.9910;RSQ=0.9527;ERATE=0.0011;THETA=0.0007;AC=2001;AN=2184 GT:DS:GL:BD 0.91620880 1
1 11503270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7720;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11503273 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0111;AVGPOST=0.9975;RSQ=0.9014;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11503313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11503343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4243;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11503513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0267;AVGPOST=0.9992;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11503595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11503604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0028;AVGPOST=0.9956;RSQ=0.3597;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11503632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11503666 . AT A 291 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8325;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11503695 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11503709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0114;AVGPOST=0.9963;RSQ=0.8808;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11503780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8719;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11503862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8735;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11503868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0547;AVGPOST=0.9988;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 11503877 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9947;RSQ=0.9637;ERATE=0.0010;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11504068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.949;LDAF=0.0847;AVGPOST=0.9876;RSQ=0.9429;ERATE=0.0006;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 11504164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11504165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3098;AVGPOST=0.9946;RSQ=0.9891;ERATE=0.0006;THETA=0.0003;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 11504168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8335;ERATE=0.0006;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11504412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.727;LDAF=0.0263;AVGPOST=0.9821;RSQ=0.7457;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11504439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.521;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6565;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11504480 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11504539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7528;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11504730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0138;AVGPOST=0.9982;RSQ=0.9447;ERATE=0.0004;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11504732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7460;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11504771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8011;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11504813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11504814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11504855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7070;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11504879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5314;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11504898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11504901 . A AC 107 PASS INDEL;BAVGPOST=0.991;BRSQ=0.472;LDAF=0.0138;AVGPOST=0.9883;RSQ=0.6712;ERATE=0.0014;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11504942 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.9759;AVGPOST=0.9956;RSQ=0.9248;ERATE=0.0005;THETA=0.0008;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 11504960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.859;LDAF=0.8961;AVGPOST=0.9745;RSQ=0.8997;ERATE=0.0013;THETA=0.0004;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 11505065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6947;ERATE=0.0008;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11505151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0079;AVGPOST=0.9993;RSQ=0.9589;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11505184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11505241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8990;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11505244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5432;ERATE=0.0016;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11505245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6639;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11505258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4258;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11505271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3465;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11505329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0351;AVGPOST=0.9973;RSQ=0.9708;ERATE=0.0005;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11505449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0408;AVGPOST=0.9962;RSQ=0.9635;ERATE=0.0007;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11505476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.522;LDAF=0.7494;AVGPOST=0.8145;RSQ=0.5690;ERATE=0.0644;THETA=0.0008;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 11505680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.612;LDAF=0.0253;AVGPOST=0.9790;RSQ=0.6688;ERATE=0.0029;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11505785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4074;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11505790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.702;LDAF=0.0141;AVGPOST=0.9863;RSQ=0.6417;ERATE=0.0024;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11505834 . TCA T 377 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9060;ERATE=0.0004;THETA=0.0130;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11507524 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11507772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0246;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11507805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0013;THETA=0.0207;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11508028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.8674;AVGPOST=0.9910;RSQ=0.9685;ERATE=0.0010;THETA=0.0028;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 11508343 . C CA 3018 PASS INDEL;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0155;AVGPOST=0.9983;RSQ=0.9592;ERATE=0.0004;THETA=0.0096;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11508756 . AT A 2236 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9423;ERATE=0.0009;THETA=0.0023;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11508794 rs80102014 A ACT 34770 PASS INDEL;BAVGPOST=0.919;BRSQ=0.710;LDAF=0.3415;AVGPOST=0.9128;RSQ=0.7188;ERATE=0.0981;THETA=0.0066;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 11509692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.848;LDAF=0.0160;AVGPOST=0.9905;RSQ=0.7490;ERATE=0.0024;THETA=0.0165;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11509982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4949;ERATE=0.0004;THETA=0.0142;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11510002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5641;AVGPOST=0.9804;RSQ=0.9702;ERATE=0.0018;THETA=0.0008;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 11510166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.645;LDAF=0.1711;AVGPOST=0.8958;RSQ=0.7054;ERATE=0.0676;THETA=0.0019;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 11510252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0004;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11510320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7047;ERATE=0.0008;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11510466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11510495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.7527;ERATE=0.0005;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11510630 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0068;AVGPOST=0.9959;RSQ=0.7867;ERATE=0.0005;THETA=0.0024;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11510660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4545;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11510684 . G GT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11510884 . T TG 308 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7209;ERATE=0.0015;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11511848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.952;LDAF=0.3800;AVGPOST=0.9731;RSQ=0.9585;ERATE=0.0066;THETA=0.0009;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 11511874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6384;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11512515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5633;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11512553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7618;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11512554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.902;LDAF=0.0337;AVGPOST=0.9925;RSQ=0.9112;ERATE=0.0007;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11512633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6458;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11512841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9589;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11512846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11512856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11512862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5029;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11512877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11512931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0149;AVGPOST=0.9980;RSQ=0.9412;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11512932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11513119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2968;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0004;THETA=0.0009;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 11513264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11513365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11513436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11513477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11513504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0270;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0004;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11513598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0012;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11513650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11513741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11513879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9815;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11513919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11513932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9539;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0006;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 11513945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11514050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11514060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11514129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0299;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0002;THETA=0.0034;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 11514149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1144;AVGPOST=0.9979;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 11514154 rs28381215 T TTC 2886 PASS INDEL;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0284;AVGPOST=0.9984;RSQ=0.9743;ERATE=0.0004;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11514187 . T TC 343 PASS INDEL;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0278;AVGPOST=0.9983;RSQ=0.9769;ERATE=0.0004;THETA=0.0029;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11514188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5470;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11514230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9568;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11514249 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.835;LDAF=0.0202;AVGPOST=0.9952;RSQ=0.9122;ERATE=0.0002;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11514281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8108;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11514306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.725;LDAF=0.0224;AVGPOST=0.9927;RSQ=0.8804;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11514364 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0146;AVGPOST=0.9988;RSQ=0.9662;ERATE=0.0003;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11514368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3967;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11514435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9444;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11514585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9493;ERATE=0.0004;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11514588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.471;LDAF=0.0060;AVGPOST=0.9925;RSQ=0.5175;ERATE=0.0013;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11514651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.699;LDAF=0.0295;AVGPOST=0.9787;RSQ=0.7389;ERATE=0.0029;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11514737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.786;LDAF=0.0122;AVGPOST=0.9957;RSQ=0.8719;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11514749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.732;LDAF=0.0126;AVGPOST=0.9936;RSQ=0.8042;ERATE=0.0005;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11514766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4956;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11514901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11514941 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8484;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11514960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9626;ERATE=0.0003;THETA=0.0037;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11514991 . A AT 416 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0041;AVGPOST=0.9975;RSQ=0.7659;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11515185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3842;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11515291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11515350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5730;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11515371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.814;LDAF=0.0239;AVGPOST=0.9959;RSQ=0.9341;ERATE=0.0004;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11515382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8577;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11515512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4279;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11515538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.709;LDAF=0.8221;AVGPOST=0.8854;RSQ=0.6800;ERATE=0.0479;THETA=0.0010;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 11515592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5990;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11515601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.441;LDAF=0.8065;AVGPOST=0.8006;RSQ=0.4878;ERATE=0.0376;THETA=0.0005;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 11515954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0214;AVGPOST=0.9901;RSQ=0.8262;ERATE=0.0011;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11515970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.641;LDAF=0.0068;AVGPOST=0.9942;RSQ=0.6388;ERATE=0.0011;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11515989 . G GT 230 PASS INDEL;BAVGPOST=0.989;BRSQ=0.600;LDAF=0.0213;AVGPOST=0.9953;RSQ=0.9109;ERATE=0.0006;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11516119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0186;AVGPOST=0.9931;RSQ=0.8491;ERATE=0.0006;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11516136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8900;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11516155 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11516171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0209;AVGPOST=0.9966;RSQ=0.9413;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11516229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6490;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11516242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8410;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11516265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5966;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11516338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0138;AVGPOST=0.9956;RSQ=0.8964;ERATE=0.0004;THETA=0.0023;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11516383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0154;AVGPOST=0.9976;RSQ=0.9365;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11516442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.641;LDAF=0.0170;AVGPOST=0.9941;RSQ=0.8595;ERATE=0.0007;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11516552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9367;ERATE=0.0005;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11516739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.753;LDAF=0.0220;AVGPOST=0.9953;RSQ=0.9163;ERATE=0.0005;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11516772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0118;AVGPOST=0.9968;RSQ=0.8912;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11516845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6112;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11516851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0216;AVGPOST=0.9960;RSQ=0.9309;ERATE=0.0002;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11516880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0213;AVGPOST=0.9968;RSQ=0.9446;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11516888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.878;LDAF=0.0219;AVGPOST=0.9959;RSQ=0.9276;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11517004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0146;AVGPOST=0.9945;RSQ=0.8465;ERATE=0.0005;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11517062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0255;AVGPOST=0.9972;RSQ=0.9587;ERATE=0.0003;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11517317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0289;AVGPOST=0.9966;RSQ=0.9514;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11517335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11517378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.8927;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11517384 . G GA 196 PASS INDEL;BAVGPOST=0.990;BRSQ=0.503;LDAF=0.0138;AVGPOST=0.9925;RSQ=0.7846;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11517471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.844;LDAF=0.0259;AVGPOST=0.9963;RSQ=0.9423;ERATE=0.0005;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11517489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6230;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11517493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11517539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0004;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11517558 . C CTT 44 PASS INDEL;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0053;AVGPOST=0.9969;RSQ=0.7425;ERATE=0.0019;THETA=0.0222;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11517573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8747;ERATE=0.0003;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11517577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.910;LDAF=0.0719;AVGPOST=0.9823;RSQ=0.9129;ERATE=0.0026;THETA=0.0143;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 11517610 . AATT A 1005 PASS INDEL;BAVGPOST=0.994;BRSQ=0.756;LDAF=0.0113;AVGPOST=0.9952;RSQ=0.8573;ERATE=0.0005;THETA=0.0055;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11517628 . C CAGAG 560 PASS INDEL;BAVGPOST=0.991;BRSQ=0.685;LDAF=0.0176;AVGPOST=0.9859;RSQ=0.6359;ERATE=0.0066;THETA=0.0055;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11517661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0005;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11517680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11517767 . C CT 456 PASS INDEL;BAVGPOST=0.924;BRSQ=0.367;LDAF=0.0843;AVGPOST=0.8905;RSQ=0.3759;ERATE=0.0121;THETA=0.0099;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11518539 . ATCT A 189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.445;LDAF=0.0125;AVGPOST=0.9791;RSQ=0.3072;ERATE=0.0012;THETA=0.0041;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11519301 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.357;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3847;ERATE=0.0008;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11519968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.602;LDAF=0.0699;AVGPOST=0.9462;RSQ=0.6486;ERATE=0.0015;THETA=0.0062;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 11519986 . T TTATA 6349 PASS INDEL;BAVGPOST=0.899;BRSQ=0.492;LDAF=0.1402;AVGPOST=0.8760;RSQ=0.5328;ERATE=0.0141;THETA=0.0112;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 11520020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.501;LDAF=0.0160;AVGPOST=0.9824;RSQ=0.5065;ERATE=0.0008;THETA=0.0023;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11520035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.420;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.2673;ERATE=0.0006;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11520046 . ACATG A 351 PASS INDEL;BAVGPOST=0.967;BRSQ=0.494;LDAF=0.0294;AVGPOST=0.9720;RSQ=0.5710;ERATE=0.0011;THETA=0.0021;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11520050 . TAATA T 220 PASS INDEL;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3596;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11520087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.679;LDAF=0.0219;AVGPOST=0.9881;RSQ=0.8027;ERATE=0.0008;THETA=0.0038;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11520099 . GAATA G 111 PASS INDEL;BAVGPOST=0.998;BRSQ=0.386;LDAF=0.0034;AVGPOST=0.9948;RSQ=0.3012;ERATE=0.0009;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11520107 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.351;LDAF=0.0047;AVGPOST=0.9930;RSQ=0.3212;ERATE=0.0017;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11520118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.258;LDAF=0.0170;AVGPOST=0.9723;RSQ=0.3198;ERATE=0.0021;THETA=0.0071;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11520128 . TA T 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.2955;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11520164 . T TTA 1325 PASS INDEL;BAVGPOST=0.963;BRSQ=0.487;LDAF=0.0588;AVGPOST=0.9329;RSQ=0.5183;ERATE=0.0064;THETA=0.0113;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 11520203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11520727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.6954;ERATE=0.0016;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11520777 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.544;LDAF=0.0164;AVGPOST=0.9816;RSQ=0.5095;ERATE=0.0008;THETA=0.0041;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11520872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.495;LDAF=0.0777;AVGPOST=0.9270;RSQ=0.5809;ERATE=0.0074;THETA=0.0088;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 11520879 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.558;LDAF=0.0542;AVGPOST=0.9556;RSQ=0.6456;ERATE=0.0059;THETA=0.0013;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11521287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.730;LDAF=0.0458;AVGPOST=0.9739;RSQ=0.7765;ERATE=0.0013;THETA=0.0112;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11521400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11521440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7189;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11522378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0368;AVGPOST=0.9983;RSQ=0.9845;ERATE=0.0005;THETA=0.0013;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11522405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8229;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11522471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9416;ERATE=0.0004;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11522476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11522526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5745;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11522629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0098;AVGPOST=0.9877;RSQ=0.4991;ERATE=0.0022;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11522861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9114;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11523049 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11523214 . G GA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0005;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11523265 . AGAGT A 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11523266 . CAGAATT C 301 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11523281 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11523342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9785;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0004;THETA=0.0014;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 11523418 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11523489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11523493 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1317;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0020;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 11523527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.7160;ERATE=0.0003;THETA=0.0046;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11523548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8311;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11523564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11523575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11523657 . G GT 17 PASS INDEL;BAVGPOST=0.984;BRSQ=0.328;LDAF=0.0087;AVGPOST=0.9880;RSQ=0.4893;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11523715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8074;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11523735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7732;ERATE=0.0006;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11523927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0169;AVGPOST=0.9979;RSQ=0.9495;ERATE=0.0005;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11523941 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5293;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11523979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8148;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11524040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11524066 . CTTA C 267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0093;AVGPOST=0.9893;RSQ=0.5656;ERATE=0.0007;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11524098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7938;ERATE=0.0009;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11524163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.9099;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11524177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0023;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11524644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4694;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11524650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11524706 . TG T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7934;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11524851 . TA T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7567;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11524853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0121;AVGPOST=0.9976;RSQ=0.9131;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11525036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11525174 . GA G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4446;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11525244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.9000;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11525281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11525293 . T TAGG 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11525446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11525498 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6873;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11525529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9548;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11525569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.939;LDAF=0.0921;AVGPOST=0.9920;RSQ=0.9646;ERATE=0.0012;THETA=0.0010;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 11525594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7628;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0003;THETA=0.0010;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 11525744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9120;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11525750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11525821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0733;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0004;THETA=0.0009;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 11525822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0002;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11525853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11525971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.887;LDAF=0.7039;AVGPOST=0.9155;RSQ=0.8750;ERATE=0.0229;THETA=0.0009;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 11526086 . CTT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11526319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11526391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8493;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11526424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0369;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0004;THETA=0.0019;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11526599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11526642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11526686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11526739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11526818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9181;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11527034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11527070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11527311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11527388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0248;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11527475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.5990;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11527536 . G GC 478 PASS INDEL;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0184;AVGPOST=0.9947;RSQ=0.8776;ERATE=0.0009;THETA=0.0018;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11527539 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0405;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0005;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11527981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8654;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11528069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0355;AVGPOST=0.9961;RSQ=0.9563;ERATE=0.0005;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11528234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11528427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6136;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11528430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0591;AVGPOST=0.9979;RSQ=0.9845;ERATE=0.0003;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 11528447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0568;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0028;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11528471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11528588 . GACTA G 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11528617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11528663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8746;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11528977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11528984 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11529141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0013;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11529142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5643;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11529201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11529249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0205;AVGPOST=0.9992;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11529277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.676;LDAF=0.0245;AVGPOST=0.9771;RSQ=0.6429;ERATE=0.0098;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11529322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11529364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11529565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0374;AVGPOST=0.9993;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11529797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11530068 . TC T 7511 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0386;AVGPOST=0.9975;RSQ=0.9752;ERATE=0.0007;THETA=0.0011;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11530100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.467;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6119;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11530102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8688;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11530115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11530150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0056;AVGPOST=0.9944;RSQ=0.6180;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11530335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7311;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11530350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7745;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11530386 . TGTG T 485 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9200;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11530434 . CAGAG C 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11530558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11530593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0530;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0025;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 11530650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2900;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0006;THETA=0.0006;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 11530747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6760;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11530758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0423;AVGPOST=0.9971;RSQ=0.9736;ERATE=0.0006;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11530797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11531036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.5867;AVGPOST=0.9940;RSQ=0.9927;ERATE=0.0004;THETA=0.0008;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 11531191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9215;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11531410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11531681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11531763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11531840 . TC T 4225 PASS INDEL;BAVGPOST=0.935;BRSQ=0.673;LDAF=0.1342;AVGPOST=0.8806;RSQ=0.5940;ERATE=0.0329;THETA=0.0015;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 11531913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.808;LDAF=0.0136;AVGPOST=0.9952;RSQ=0.8534;ERATE=0.0006;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11531956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5208;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11532048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8258;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11532266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11532312 rs71848131 CTGTTTTGTTT C 561 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8057;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11532367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.881;LDAF=0.8642;AVGPOST=0.9424;RSQ=0.8258;ERATE=0.0185;THETA=0.0003;AC=1919;AN=2184 GT:DS:GL:BD 0.87866300 1
1 11532384 . CTCTG C 231 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11532402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11532427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11532496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6132;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 11532592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11532631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0029;AVGPOST=0.9953;RSQ=0.4171;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11532692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0083;AVGPOST=0.9971;RSQ=0.8591;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11532852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.943;LDAF=0.3017;AVGPOST=0.9827;RSQ=0.9719;ERATE=0.0011;THETA=0.0012;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 11532928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0045;AVGPOST=0.9966;RSQ=0.6857;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11532998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4886;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11533165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5894;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11533187 rs71582219 TA T 14941 PASS INDEL;BAVGPOST=0.935;BRSQ=0.889;LDAF=0.5855;AVGPOST=0.9497;RSQ=0.9267;ERATE=0.0030;THETA=0.0011;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 11533317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6445;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11533382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11533383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.825;LDAF=0.5371;AVGPOST=0.8595;RSQ=0.7818;ERATE=0.0218;THETA=0.0008;AC=1218;AN=2184 GT:DS:GL:BD 0.55769229 1
1 11533761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11533952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2657;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 11533989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6137;AVGPOST=0.9958;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 11534007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11534018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11534103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11534131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11534164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8527;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11534222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6128;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0005;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 11534339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11534359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11534382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7423;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11534398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11534456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6130;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 11534473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0142;AVGPOST=0.9987;RSQ=0.9629;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11534526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7474;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11534591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11534644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9591;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11534713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11534729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11534800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3347;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 11534968 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9009;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11534975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11535101 . G GT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3938;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11535246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6435;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11535251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11535303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9553;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11535424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11535437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7238;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11535470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11535471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8340;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11535512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11535540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1945;AVGPOST=0.9920;RSQ=0.9796;ERATE=0.0004;THETA=0.0006;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 11535560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.654;LDAF=0.0481;AVGPOST=0.9705;RSQ=0.7718;ERATE=0.0015;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11535567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11535613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11535795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11535852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9991;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11535865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11535971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0197;AVGPOST=0.9981;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11536058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11536104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6091;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0005;THETA=0.0009;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 11536110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11536129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11536130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11536155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5930;AVGPOST=0.9972;RSQ=0.9963;ERATE=0.0004;THETA=0.0010;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 11536274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6704;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11536308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11536319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8899;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11536401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11536663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6127;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0009;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 11536749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11536789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11536901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2669;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 11536929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3982;AVGPOST=0.9940;RSQ=0.9905;ERATE=0.0009;THETA=0.0002;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 11536949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1936;AVGPOST=0.9941;RSQ=0.9849;ERATE=0.0006;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 11537116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11537170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5041;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11537186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7846;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11537277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9555;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0005;THETA=0.0005;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 11537287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11537300 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5963;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 11537334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5409;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11537388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11537423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8340;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11537595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6042;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11537683 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11537820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6325;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 11537873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6922;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11537902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8109;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11537996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7660;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11538099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9087;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11538104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8687;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11538193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11538349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11538350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11538365 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11538441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9833;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11538599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4166;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 11538608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6322;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 11538796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11538860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8855;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11538863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6364;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 11538956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11538959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6222;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11539024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0114;AVGPOST=0.9973;RSQ=0.9173;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11539074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7049;AVGPOST=0.9960;RSQ=0.9923;ERATE=0.0012;THETA=0.0003;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 11539291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6298;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0003;AC=1377;AN=2184 GT:DS:GL:BD 0.63049453 1
1 11539383 rs35083563 AT A 5157 PASS INDEL;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0258;AVGPOST=0.9951;RSQ=0.9314;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11539573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4306;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 11539673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11539795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11539882 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11539892 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9461;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11539911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9962;RSQ=0.3326;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11539945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4160;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0007;THETA=0.0004;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 11539992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9981;RSQ=0.9287;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11540345 . TA T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5409;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11540395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6268;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11540553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7112;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11540687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7918;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11540774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11540804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11540806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7230;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11540811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11540915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6667;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11540943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0101;AVGPOST=0.9977;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11540985 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2370;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 11541047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8043;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11541053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11541151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11541232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0402;AVGPOST=0.9983;RSQ=0.9859;ERATE=0.0003;THETA=0.0026;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11541278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0081;AVGPOST=0.9971;RSQ=0.8596;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11541279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11541451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1543;AVGPOST=0.9980;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 11541458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4155;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0005;THETA=0.0011;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 11541868 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1635;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 11541985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1553;AVGPOST=0.9960;RSQ=0.9876;ERATE=0.0006;THETA=0.0002;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 11542000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8601;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11542121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11542132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6316;AVGPOST=0.9853;RSQ=0.9750;ERATE=0.0021;THETA=0.0005;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 11542175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.948;LDAF=0.0900;AVGPOST=0.9896;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 11542203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7278;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11542207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9339;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11542281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11542317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0407;AVGPOST=0.9980;RSQ=0.9830;ERATE=0.0003;THETA=0.0026;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11542324 . TGTGA T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4411;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11542480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0399;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11542518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4815;ERATE=0.0004;THETA=0.0137;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11542564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.778;LDAF=0.5858;AVGPOST=0.8149;RSQ=0.7080;ERATE=0.0140;THETA=0.0004;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 11542791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.787;LDAF=0.1725;AVGPOST=0.9330;RSQ=0.8168;ERATE=0.0034;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 11542806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0079;AVGPOST=0.9893;RSQ=0.5171;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11543046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0117;AVGPOST=0.9931;RSQ=0.7950;ERATE=0.0011;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11543102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11543626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11543697 . AC A 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.452;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11543783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11543830 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11543901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7382;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11543903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9845;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11543950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11544115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11544253 . A AG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5206;ERATE=0.0003;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11544288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11544306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1606;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 11544371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11544379 rs11430764 C CA 2218 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0003;THETA=0.0032;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11544398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11544694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11544713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11544773 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11544789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11544889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11544995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11545108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2692;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 11545250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11545289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11545328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11545479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2692;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 11545521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11545794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11546189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11546435 . G GT 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11546436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5675;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11546476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8793;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 11546555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11546562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11546613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11546666 . AG A 206 PASS INDEL;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9112;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11546733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2692;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 11546735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11546793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11546818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11546937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11547008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11547054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1655;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 11547105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11547266 . G GA 5706 PASS INDEL;BAVGPOST=0.973;BRSQ=0.898;LDAF=0.1612;AVGPOST=0.9674;RSQ=0.9045;ERATE=0.0065;THETA=0.0003;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 11547357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4423;AVGPOST=0.9956;RSQ=0.9931;ERATE=0.0009;THETA=0.0004;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 11547388 . AAAG A 2116 PASS INDEL;BAVGPOST=0.983;BRSQ=0.927;LDAF=0.1400;AVGPOST=0.9884;RSQ=0.9638;ERATE=0.0005;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 11547534 . AAG A 8041 PASS INDEL;BAVGPOST=0.963;BRSQ=0.863;LDAF=0.1769;AVGPOST=0.9281;RSQ=0.8103;ERATE=0.0151;THETA=0.0003;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 11547535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0088;AVGPOST=0.9944;RSQ=0.7580;ERATE=0.0010;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11547718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7326;AVGPOST=0.9931;RSQ=0.9859;ERATE=0.0015;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 11547725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11547736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11547822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11547987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11548052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11548114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11548146 . TG T 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.4436;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11548171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11548438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6950;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11548443 . AG A 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11548716 . C CT 653 PASS INDEL;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0112;AVGPOST=0.9953;RSQ=0.8185;ERATE=0.0012;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11548770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11548872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.589;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7397;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11548919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4786;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11549058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4675;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11549303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8994;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11549617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11549674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.759;LDAF=0.0362;AVGPOST=0.9913;RSQ=0.9151;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 11549759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0203;AVGPOST=0.9958;RSQ=0.9177;ERATE=0.0007;THETA=0.0012;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11549842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4321;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11549974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0158;AVGPOST=0.9943;RSQ=0.8783;ERATE=0.0006;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11550080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7470;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11550148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.4008;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11550305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11550480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11550539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0482;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 11550540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6983;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11550595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11550671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6697;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11550714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4151;AVGPOST=0.9935;RSQ=0.9911;ERATE=0.0005;THETA=0.0009;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 11550867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0497;AVGPOST=0.9986;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 11550874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6912;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11550952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.5047;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11550975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11551009 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5312;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11551046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11551465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11551557 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11551623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9176;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11551807 . TATGTAATCCAAGC T 6002 PASS INDEL;BAVGPOST=0.991;BRSQ=0.852;LDAF=0.0290;AVGPOST=0.9866;RSQ=0.8321;ERATE=0.0004;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11551824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6448;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11551869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3756;AVGPOST=0.9940;RSQ=0.9915;ERATE=0.0007;THETA=0.0009;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 11551966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7523;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11552092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6185;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11552105 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11552269 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11552395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0121;AVGPOST=0.9970;RSQ=0.9027;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11552540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0111;AVGPOST=0.9965;RSQ=0.8704;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11552584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7528;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11552603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0468;AVGPOST=0.9986;RSQ=0.9900;ERATE=0.0004;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11552679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11552691 . AAGG A 769 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9458;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11552692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7125;ERATE=0.0004;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11552694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9525;ERATE=0.0003;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11552823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5767;AVGPOST=0.9939;RSQ=0.9907;ERATE=0.0008;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 11552845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5286;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11552866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6382;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11553014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8702;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11553023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11553095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8082;ERATE=0.0006;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11553202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11553388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.9439;AVGPOST=0.9988;RSQ=0.9895;ERATE=0.0005;THETA=0.0003;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 11553437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11553472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11553517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11553529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11553552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11553690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0323;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0003;THETA=0.0009;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 11553766 rs111981885 C CA 17030 PASS INDEL;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0582;AVGPOST=0.9982;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 11553768 . GGA G 624 PASS INDEL;BAVGPOST=0.976;BRSQ=0.738;LDAF=0.0687;AVGPOST=0.9452;RSQ=0.6428;ERATE=0.0301;THETA=0.0022;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11553777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9128;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11553927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11554045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11554096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11554109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0040;AVGPOST=0.9967;RSQ=0.7042;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11554128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11554143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.942;LDAF=0.0593;AVGPOST=0.9931;RSQ=0.9567;ERATE=0.0008;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 11554565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0026;AVGPOST=0.9960;RSQ=0.4133;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11554585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.814;LDAF=0.1897;AVGPOST=0.9471;RSQ=0.8693;ERATE=0.0043;THETA=0.0010;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 11554724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.9529;AVGPOST=0.9859;RSQ=0.8739;ERATE=0.0017;THETA=0.0007;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 11554842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2401;AVGPOST=0.9904;RSQ=0.9793;ERATE=0.0005;THETA=0.0006;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 11555014 . TG T 1050 PASS INDEL;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0205;AVGPOST=0.9856;RSQ=0.7497;ERATE=0.0005;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11555067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11555243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11555294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9338;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11555311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11555370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11555395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8078;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11555400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9228;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11555607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8238;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11555846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11555925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.2983;ERATE=0.0014;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11556384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3850;ERATE=0.0007;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11556394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5716;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0006;THETA=0.0007;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 11556799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11556925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8413;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11557009 . CG C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11557032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11557041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11557056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8797;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11557137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11557220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9644;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11557247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.8001;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11557391 . CCA C 84 PASS INDEL;BAVGPOST=0.990;BRSQ=0.701;LDAF=0.0178;AVGPOST=0.9826;RSQ=0.5965;ERATE=0.0103;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11557524 . CACAT C 298 PASS INDEL;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6601;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11557533 . CAT C 143 PASS INDEL;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6197;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11557535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8515;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11557554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.890;LDAF=0.0386;AVGPOST=0.9866;RSQ=0.8615;ERATE=0.0038;THETA=0.0013;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11557569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9114;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11557581 . C CAT 1598 PASS INDEL;BAVGPOST=0.986;BRSQ=0.888;LDAF=0.0518;AVGPOST=0.9876;RSQ=0.9030;ERATE=0.0040;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 11557585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8447;ERATE=0.0014;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11557752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5093;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11557798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11557817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558067 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0507;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0009;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 11558089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11558112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11558147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11558215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11558221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11558302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11558315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11558435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6265;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11558444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0428;AVGPOST=0.9989;RSQ=0.9904;ERATE=0.0003;THETA=0.0022;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11558654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11558773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11558839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11558855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559023 rs5778038 TG T 2890 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11559103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1037;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11559201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7110;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 11559220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11559280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1035;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11559289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9419;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11559319 . AT A 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5393;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11559394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11559399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11559472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11559641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11559752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11559778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559836 rs113588617 GA G 11977 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1051;AVGPOST=0.9981;RSQ=0.9921;ERATE=0.0005;THETA=0.0006;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 11559892 . AC A 1369 PASS INDEL;BAVGPOST=0.980;BRSQ=0.908;LDAF=0.1291;AVGPOST=0.9542;RSQ=0.8479;ERATE=0.0011;THETA=0.0006;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 11559897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11559899 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 11559950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 11560124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11560227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11560311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.644;LDAF=0.0044;AVGPOST=0.9966;RSQ=0.6989;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11560335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0049;AVGPOST=0.9961;RSQ=0.7177;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11560346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.939;LDAF=0.6879;AVGPOST=0.9706;RSQ=0.9560;ERATE=0.0055;THETA=0.0010;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 11560347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0837;AVGPOST=0.9990;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 11560352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7077;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 11560456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7082;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0004;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 11560480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8117;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 11560581 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9444;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11560682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8214;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 11560708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11560748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11560751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11560768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11560924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11560925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0013;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11560942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9980;RSQ=0.9771;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11560973 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11560978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11560991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11561025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1024;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 11561221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0085;AVGPOST=0.9982;RSQ=0.9051;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11561370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5929;ERATE=0.0008;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11561429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11561502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9413;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11561620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11561653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1032;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11561688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 11561760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11561989 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.441;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.3917;ERATE=0.0013;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11561997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11562008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7112;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 11562129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11562142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11562154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11562175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11562181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0824;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 11562287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11562424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562430 . AAG A 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4464;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9049;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11562593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0823;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 11562695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11562715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11562782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8341;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0006;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 11562798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0002;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11563012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0082;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11563013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11563088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0737;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11563233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5761;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11563338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5192;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11563345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11563357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0841;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0014;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 11563358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11563364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11563398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11563409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11563413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11563491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11563504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11563615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0080;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11563676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9373;ERATE=0.0004;THETA=0.0067;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11563697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6353;ERATE=0.0006;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11563773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0154;AVGPOST=0.9890;RSQ=0.7254;ERATE=0.0023;THETA=0.0056;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11563795 . TAC T 64 PASS INDEL;BAVGPOST=0.994;BRSQ=0.690;LDAF=0.0165;AVGPOST=0.9836;RSQ=0.6282;ERATE=0.0054;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11563812 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9291;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11563847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4658;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11563878 rs67961474 CAATT C 52372 PASS INDEL;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5597;AVGPOST=0.9786;RSQ=0.9698;ERATE=0.0033;THETA=0.0004;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 11563973 . AATTC A 43662 PASS INDEL;BAVGPOST=0.842;BRSQ=0.344;LDAF=0.8390;AVGPOST=0.8470;RSQ=0.5980;ERATE=0.0091;THETA=0.0018;AC=1842;AN=2184 GT:DS:GL:BD 0.84340662 1
1 11563978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11564119 . GT G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5326;ERATE=0.0005;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11564227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11564331 . T TG 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11564363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9791;ERATE=0.0002;THETA=0.0052;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11564384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2036;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 11564427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4683;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11564637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11564644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0061;AVGPOST=0.9958;RSQ=0.7706;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11564683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11564731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9517;AVGPOST=0.9983;RSQ=0.9860;ERATE=0.0002;THETA=0.0002;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 11564754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4442;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 11564801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11564823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11564976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11565086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9564;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11565099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11565111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9711;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11565197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8743;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11565280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11565320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0746;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 11565341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11565391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11565486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11565596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4684;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11565611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11565624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4685;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0010;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11565726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7425;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11565785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11565940 . TC T 4674 PASS INDEL;BAVGPOST=0.974;BRSQ=0.950;LDAF=0.4127;AVGPOST=0.9459;RSQ=0.9177;ERATE=0.0124;THETA=0.0005;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 11566075 rs35149863 CT C 40799 PASS INDEL;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.4269;AVGPOST=0.9900;RSQ=0.9850;ERATE=0.0006;THETA=0.0004;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 11566078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5504;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11566159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4442;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0001;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 11566171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11566350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11566351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0746;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 11566383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11566409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9370;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11566436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11566496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7566;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11566500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5211;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11566584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11566599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0002;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11566649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8869;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11566658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4683;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11566663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11566669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5089;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11566691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8880;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11566707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4684;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0002;THETA=0.0002;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11566752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9409;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11566928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0066;AVGPOST=0.9956;RSQ=0.7512;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11566982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11567076 . G GTA 1585 PASS INDEL;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0179;AVGPOST=0.9976;RSQ=0.9471;ERATE=0.0005;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11567101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3753;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11567294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0434;AVGPOST=0.9988;RSQ=0.9867;ERATE=0.0004;THETA=0.0002;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11567429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9260;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11567467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4335;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0007;THETA=0.0002;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 11567584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11567644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7810;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11567668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9519;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11567719 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11567731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9703;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11567743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3591;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 11567770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8219;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11567853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11567882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11567907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6200;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11567944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0463;AVGPOST=0.9975;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11567988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11568197 . AT A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0061;AVGPOST=0.9939;RSQ=0.6518;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11568200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.4783;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11568223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6338;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11568229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6558;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11568268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6413;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11568413 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3800;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11568630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0003;THETA=0.0028;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 11568807 . AT A 9 PASS INDEL;BAVGPOST=0.995;BRSQ=0.172;LDAF=0.0099;AVGPOST=0.9876;RSQ=0.5046;ERATE=0.0012;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11568893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11569223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11569239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11569334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11569475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1345;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 11569497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0365;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11569688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11569845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11569846 . T TC 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11569872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11569961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0610;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11570081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8860;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=1936;AN=2184 GT:DS:GL:BD 0.88644689 1
1 11570110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0047;AVGPOST=0.9982;RSQ=0.8491;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11570152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11570178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11570233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5027;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11570254 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0609;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0002;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11570311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.9115;AVGPOST=0.9968;RSQ=0.9864;ERATE=0.0006;THETA=0.0006;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 11570317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7239;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11570368 . AG A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.4150;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11570368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11570490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8783;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11570804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11570830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11570851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7724;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11570910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9438;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11570952 rs3039285 T TGAAA 47268 PASS INDEL;BAVGPOST=0.986;BRSQ=0.982;LDAF=0.4549;AVGPOST=0.9489;RSQ=0.9407;ERATE=0.0066;THETA=0.0002;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 11571008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7799;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11571066 . A AAGGC 34825 PASS INDEL;BAVGPOST=0.930;BRSQ=0.898;LDAF=0.4931;AVGPOST=0.8594;RSQ=0.8192;ERATE=0.0266;THETA=0.0006;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 11571134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0653;AVGPOST=0.9969;RSQ=0.9796;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 11571169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9987;RSQ=0.9559;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11571203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.8820;AVGPOST=0.9916;RSQ=0.9675;ERATE=0.0015;THETA=0.0002;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 11571281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8131;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11571346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.8965;AVGPOST=0.9803;RSQ=0.9277;ERATE=0.0014;THETA=0.0012;AC=1970;AN=2184 GT:DS:GL:BD 0.90201467 1
1 11571393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0153;AVGPOST=0.9935;RSQ=0.8313;ERATE=0.0005;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11571444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.625;BRSQ=0.328;LDAF=0.3972;AVGPOST=0.6983;RSQ=0.4739;ERATE=0.0307;THETA=0.0004;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 11571488 . GA G 46 PASS INDEL;BAVGPOST=0.486;BRSQ=0.018;LDAF=0.2492;AVGPOST=0.7047;RSQ=0.3233;ERATE=0.0174;THETA=0.0028;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 11571498 . GA G 204 PASS INDEL;BAVGPOST=0.406;BRSQ=0.016;LDAF=0.8770;AVGPOST=0.8808;RSQ=0.5761;ERATE=0.0030;THETA=0.0113;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 11571503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0626;AVGPOST=0.9984;RSQ=0.9910;ERATE=0.0002;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 11571625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9322;ERATE=0.0003;THETA=0.0046;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11571740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6921;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11571766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11571833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4787;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11572043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8836;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0003;THETA=0.0029;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 11572069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0625;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 11572076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0127;AVGPOST=0.9988;RSQ=0.9654;ERATE=0.0002;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11572080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1600;AVGPOST=0.9940;RSQ=0.9843;ERATE=0.0004;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 11572257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11572265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0002;THETA=0.0085;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11572369 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9053;AVGPOST=0.9970;RSQ=0.9881;ERATE=0.0004;THETA=0.0005;AC=1978;AN=2184 GT:DS:GL:BD 0.90567768 1
1 11572387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7750;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11572468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11572676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0769;AVGPOST=0.9982;RSQ=0.9917;ERATE=0.0002;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 11572761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11572826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1859;AVGPOST=0.9962;RSQ=0.9905;ERATE=0.0006;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 11572832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8617;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11572960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11573059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11573177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11573178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.582;LDAF=0.9494;AVGPOST=0.9429;RSQ=0.5289;ERATE=0.0059;THETA=0.0009;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 11573204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0140;AVGPOST=0.9954;RSQ=0.8475;ERATE=0.0013;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11573243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.928;LDAF=0.7719;AVGPOST=0.9325;RSQ=0.8589;ERATE=0.0101;THETA=0.0004;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 11573325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8358;AVGPOST=0.9961;RSQ=0.9888;ERATE=0.0009;THETA=0.0008;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 11573396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11573430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7370;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11573488 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11573505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7919;AVGPOST=0.9960;RSQ=0.9912;ERATE=0.0007;THETA=0.0004;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 11573608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8350;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11573622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5687;AVGPOST=0.9969;RSQ=0.9958;ERATE=0.0003;THETA=0.0032;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 11573640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7156;ERATE=0.0006;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11573933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7952;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 11574096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11574123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5694;AVGPOST=0.9946;RSQ=0.9915;ERATE=0.0010;THETA=0.0004;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 11574299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7945;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0007;THETA=0.0010;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 11574329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7954;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 11574458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0922;AVGPOST=0.9973;RSQ=0.9868;ERATE=0.0005;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 11574539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11574572 rs34978243 TA T 20608 PASS INDEL;BAVGPOST=0.948;BRSQ=0.877;LDAF=0.7370;AVGPOST=0.9237;RSQ=0.8516;ERATE=0.0091;THETA=0.0005;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 11574607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9952;RSQ=0.7727;ERATE=0.0007;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11574623 rs71090320 A AGCAGGGGCAGGCAT 31029 PASS INDEL;BAVGPOST=0.951;BRSQ=0.151;LDAF=0.9461;AVGPOST=0.9190;RSQ=0.3566;ERATE=0.0043;THETA=0.0007;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 11574661 . GC G 1568 PASS INDEL;BAVGPOST=0.643;BRSQ=0.144;LDAF=0.3249;AVGPOST=0.6033;RSQ=0.2143;ERATE=0.0500;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 11574662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9975;RSQ=0.9173;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11574727 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11574741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6828;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11574766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11574821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8881;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11574877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9981;RSQ=0.9405;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11574890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8048;AVGPOST=0.9946;RSQ=0.9855;ERATE=0.0009;THETA=0.0004;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 11574928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.8959;AVGPOST=0.9952;RSQ=0.9772;ERATE=0.0007;THETA=0.0005;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 11574932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8929;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11575062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9722;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11575109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6773;ERATE=0.0004;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11575293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11575322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0099;AVGPOST=0.9936;RSQ=0.7455;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11575337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8153;AVGPOST=0.9967;RSQ=0.9916;ERATE=0.0006;THETA=0.0007;AC=1785;AN=2184 GT:DS:GL:BD 0.81730771 1
1 11575342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.933;LDAF=0.1248;AVGPOST=0.9725;RSQ=0.9121;ERATE=0.0005;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11575348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.9991;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0005;THETA=0.0006;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 11575505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1822;AVGPOST=0.9975;RSQ=0.9936;ERATE=0.0006;THETA=0.0037;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 11575539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7153;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11575558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5620;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11575707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7210;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11575713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11575726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9169;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11575731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5349;AVGPOST=0.9971;RSQ=0.9963;ERATE=0.0005;THETA=0.0029;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 11575768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11575815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11575872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11575882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1716;AVGPOST=0.9952;RSQ=0.9874;ERATE=0.0017;THETA=0.0013;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 11575905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0223;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0003;THETA=0.0018;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11575995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4210;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0007;THETA=0.0003;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 11576025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.2164;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11576038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11576048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.1939;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 11576188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5940;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11576236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9379;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11576254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11576255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11576268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0377;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11576307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4221;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 11576315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5847;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11576437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9225;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11576449 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11576461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11576547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11576718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11576775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0848;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 11576785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9790;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11576816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0814;AVGPOST=0.9974;RSQ=0.9861;ERATE=0.0005;THETA=0.0012;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 11576910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0965;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 11576990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577045 . CA C 826 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11577065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9518;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11577098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7667;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11577119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7612;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11577268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0854;AVGPOST=0.9980;RSQ=0.9908;ERATE=0.0008;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 11577319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1089;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 11577421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.9104;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11577429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11577540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8718;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11577593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0957;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 11577638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11577661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11577835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11577846 rs34741789 CTT C 13213 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0957;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 11577858 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2273;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 11577910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9150;ERATE=0.0005;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11578054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.1588;AVGPOST=0.9903;RSQ=0.9728;ERATE=0.0008;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 11578102 . C CT 673 PASS INDEL;BAVGPOST=0.995;BRSQ=0.790;LDAF=0.0152;AVGPOST=0.9879;RSQ=0.6893;ERATE=0.0030;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11578154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11578267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1931;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0008;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 11578311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8021;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11578408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8194;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11578481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11578607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11578632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11578663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11578690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11578752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11578781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11578782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11578809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11578829 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11578890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11578938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1934;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 11579037 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11579242 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579265 . C CT 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9465;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11579368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8163;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11579678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7502;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11579762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7032;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11579940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11580056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11580093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11580116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5213;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11580119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11580321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0043;AVGPOST=0.9962;RSQ=0.6690;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11580349 . AT A 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6296;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11580398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6394;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11580421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0189;AVGPOST=0.9977;RSQ=0.9469;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11580430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.602;LDAF=0.7527;AVGPOST=0.7793;RSQ=0.5019;ERATE=0.0429;THETA=0.0001;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 11580561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0257;AVGPOST=0.9991;RSQ=0.9840;ERATE=0.0004;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11580695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4659;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11580696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7257;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11580823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6872;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11580863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11581087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11581127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2229;AVGPOST=0.9946;RSQ=0.9883;ERATE=0.0006;THETA=0.0002;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 11581194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4175;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11581248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0082;AVGPOST=0.9964;RSQ=0.8054;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11581290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11581322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1928;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 11581367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2125;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0015;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 11581559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11581648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9263;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11581895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11582047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6161;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11582125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11582127 rs77472058 AC A 18977 PASS INDEL;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1601;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0005;THETA=0.0003;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 11582145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11582239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2133;AVGPOST=0.9927;RSQ=0.9840;ERATE=0.0004;THETA=0.0004;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 11582372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8530;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11582468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11582757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7153;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11582777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7519;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11582918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11582975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11582986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9625;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11583050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11583100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11583231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1702;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0027;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 11583262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9676;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11583278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0049;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11583384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1314;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 11583466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6514;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11583475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2036;AVGPOST=0.9965;RSQ=0.9929;ERATE=0.0005;THETA=0.0005;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 11583538 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0004;THETA=0.0016;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11583635 . G GA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7157;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11583697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11583780 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11583810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9381;ERATE=0.0003;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11583827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11583828 . GTAGTCAAAACAC G 436 PASS INDEL;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0077;AVGPOST=0.9948;RSQ=0.7656;ERATE=0.0005;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11583877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11583940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11583966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6858;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0007;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 11584031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6858;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 11584085 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0370;AVGPOST=0.9992;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11584093 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8665;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11584124 . A AT 4797 PASS INDEL;BAVGPOST=0.745;BRSQ=0.586;LDAF=0.3763;AVGPOST=0.7607;RSQ=0.6192;ERATE=0.0471;THETA=0.0005;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 11584148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7380;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 11584241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6242;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11584244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6854;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 11584257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0528;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 11584389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6849;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 11584391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.938;LDAF=0.6522;AVGPOST=0.9486;RSQ=0.9267;ERATE=0.0102;THETA=0.0009;AC=1443;AN=2184 GT:DS:GL:BD 0.66071427 1
1 11584456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0118;AVGPOST=0.9973;RSQ=0.9054;ERATE=0.0007;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11584457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0174;AVGPOST=0.9963;RSQ=0.9197;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11584466 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0142;AVGPOST=0.9983;RSQ=0.9492;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11584479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0179;AVGPOST=0.9955;RSQ=0.9005;ERATE=0.0005;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11584492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9613;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11584498 . TG T 2345 PASS INDEL;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0412;AVGPOST=0.9899;RSQ=0.9068;ERATE=0.0015;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 11584530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.6659;AVGPOST=0.9613;RSQ=0.9446;ERATE=0.0057;THETA=0.0005;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 11584556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0047;AVGPOST=0.9936;RSQ=0.4859;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11584558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.545;LDAF=0.0039;AVGPOST=0.9941;RSQ=0.3700;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11584590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.6764;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11584618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0175;AVGPOST=0.9989;RSQ=0.9715;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11584773 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11584796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6548;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11584808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6829;AVGPOST=0.9946;RSQ=0.9922;ERATE=0.0007;THETA=0.0004;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 11584911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6839;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 11584937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0387;AVGPOST=0.9991;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11584947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6843;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0006;THETA=0.0002;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 11585136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6849;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 11585141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0034;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11585200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6462;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11585207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5422;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11585255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0149;AVGPOST=0.9990;RSQ=0.9716;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11585287 . TTATAA T 651 PASS INDEL;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0076;AVGPOST=0.9960;RSQ=0.7956;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11585288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8939;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11585348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.8899;ERATE=0.0007;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11585537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9693;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11585550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11585607 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11585628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11585640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11585726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0055;AVGPOST=0.9965;RSQ=0.7405;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11585894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6822;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0007;THETA=0.0002;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11585971 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11586029 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1308;AVGPOST=0.9967;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 11586040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6825;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0008;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11586063 rs72449946 TAAC T 8446 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0425;AVGPOST=0.9963;RSQ=0.9698;ERATE=0.0005;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 11586172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6834;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11586195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1315;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 11586396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4179;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11586519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6829;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0009;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11586521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11586540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1314;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 11586559 . TATATC T 1232 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9978;RSQ=0.8983;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11586638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4681;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11586703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11586718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0085;AVGPOST=0.9968;RSQ=0.8545;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11586719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8345;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11586774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11586805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0184;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11586832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6829;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11586879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.773;LDAF=0.0222;AVGPOST=0.9852;RSQ=0.7443;ERATE=0.0011;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11586904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.963;LDAF=0.4181;AVGPOST=0.9741;RSQ=0.9639;ERATE=0.0019;THETA=0.0005;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 11586917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6822;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11586991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11587053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7270;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 11587064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7315;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11587070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11587084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1453;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0004;THETA=0.0007;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 11587091 . A AT 26241 PASS INDEL;BAVGPOST=0.964;BRSQ=0.938;LDAF=0.6332;AVGPOST=0.9290;RSQ=0.8992;ERATE=0.0189;THETA=0.0003;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 11587128 rs56129365 T TG 97104 PASS INDEL;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.6815;AVGPOST=0.9955;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11587129 . G GT 28292 PASS INDEL;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.6492;AVGPOST=0.9453;RSQ=0.9208;ERATE=0.0154;THETA=0.0004;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 11587131 . C CT 94 PASS INDEL;BAVGPOST=0.990;BRSQ=0.465;LDAF=0.0210;AVGPOST=0.9719;RSQ=0.4791;ERATE=0.0043;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11587211 . C CAG 17557 PASS INDEL;BAVGPOST=0.943;BRSQ=0.910;LDAF=0.6132;AVGPOST=0.8859;RSQ=0.8446;ERATE=0.0292;THETA=0.0007;AC=1373;AN=2184 GT:DS:GL:BD 0.62866300 1
1 11587410 . G GAA 88117 PASS INDEL;BAVGPOST=0.975;BRSQ=0.965;LDAF=0.6607;AVGPOST=0.9872;RSQ=0.9824;ERATE=0.0005;THETA=0.0002;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 11587414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.702;LDAF=0.2262;AVGPOST=0.8793;RSQ=0.7081;ERATE=0.0871;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 11587415 rs4038182 G GAC 87062 PASS INDEL;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.6600;AVGPOST=0.9852;RSQ=0.9792;ERATE=0.0013;THETA=0.0008;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 11587417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6642;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0004;THETA=0.0008;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 11587447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0049;AVGPOST=0.9959;RSQ=0.6940;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11587489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5184;AVGPOST=0.9956;RSQ=0.9934;ERATE=0.0005;THETA=0.0005;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 11587618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5180;AVGPOST=0.9911;RSQ=0.9866;ERATE=0.0018;THETA=0.0007;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 11587663 . AT A 140 PASS INDEL;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11587689 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7358;AVGPOST=0.9962;RSQ=0.9935;ERATE=0.0005;THETA=0.0010;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 11587706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11587789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5183;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 11587837 . CTAAA C 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3470;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11587872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5177;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 11587906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5186;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0006;THETA=0.0040;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 11587939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5853;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11588045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1073;AVGPOST=0.9977;RSQ=0.9898;ERATE=0.0004;THETA=0.0010;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11588077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8804;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11588173 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5609;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11588493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11588503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11588637 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11588814 . TG T 226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8340;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11588838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0336;AVGPOST=0.9984;RSQ=0.9804;ERATE=0.0005;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11588995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5750;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.7158;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11589119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9299;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11589212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11589272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11589294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.791;LDAF=0.0091;AVGPOST=0.9955;RSQ=0.8109;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11589311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8277;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11589366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1736;AVGPOST=0.9977;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 11589492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1237;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11589692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0339;AVGPOST=0.9993;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11589713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1743;AVGPOST=0.9965;RSQ=0.9914;ERATE=0.0016;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 11589740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0342;AVGPOST=0.9989;RSQ=0.9837;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11589784 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7243;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11589815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8776;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11589871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5220;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11589983 . CA C 1435 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9994;RSQ=0.9813;ERATE=0.0004;THETA=0.0040;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11590002 . AT A 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5772;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11590014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11590024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0064;AVGPOST=0.9960;RSQ=0.7569;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11590036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5287;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590065 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11590175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11590306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8783;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11590418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11590427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590558 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0404;AVGPOST=0.9983;RSQ=0.9851;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11590614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2036;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 11590664 . TA T 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4680;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590759 . AGT A 362 PASS INDEL;BAVGPOST=0.975;BRSQ=0.651;LDAF=0.0612;AVGPOST=0.9380;RSQ=0.5512;ERATE=0.0251;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11590801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11590928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1870;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11590937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0674;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11591140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9157;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11591142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0317;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 11591207 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2037;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 11591404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3862;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0007;THETA=0.0002;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 11591534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11591545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11591600 . GT G 4496 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11591645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11591664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0675;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11591811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11591822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8468;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11591823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11591943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11591990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11592058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11592110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5187;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11592184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8297;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11592204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7493;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11592214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1876;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 11592253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11592302 . TG T 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6797;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11592388 . G GT 9 PASS INDEL;BAVGPOST=0.995;BRSQ=0.458;LDAF=0.0065;AVGPOST=0.9901;RSQ=0.3989;ERATE=0.0026;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11592389 . GTA G 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7390;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11592559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11592574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0181;AVGPOST=0.9977;RSQ=0.9439;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11592655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11592809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9988;RSQ=0.9885;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11592839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0808;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 11593003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0256;AVGPOST=0.9991;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11593035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0810;AVGPOST=0.9985;RSQ=0.9912;ERATE=0.0004;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 11593046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1240;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11593050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11593074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9145;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11593171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4295;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0005;THETA=0.0002;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 11593178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11593197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8221;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11593235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1234;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11593268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1235;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0001;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11593303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11593378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6923;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11593414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11593451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11593452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11593648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9600;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11593675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6866;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11593715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4239;AVGPOST=0.9970;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 11593741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5649;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0006;THETA=0.0004;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 11593835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1074;AVGPOST=0.9982;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 11593909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1068;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 11594061 . TG T 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11594074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11594083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11594118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11594165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11594166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8295;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11594344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9367;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11594358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5175;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11594396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11594484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8049;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11594511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1064;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 11594523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8618;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11594642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5652;AVGPOST=0.9970;RSQ=0.9959;ERATE=0.0004;THETA=0.0069;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 11594759 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11594783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11594823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0003;THETA=0.0031;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11594870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11594989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1063;AVGPOST=0.9982;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 11595037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0268;AVGPOST=0.9990;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11595095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9074;AVGPOST=0.9962;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=1982;AN=2184 GT:DS:GL:BD 0.90750915 1
1 11595119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5070;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11595228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0272;AVGPOST=0.9965;RSQ=0.9483;ERATE=0.0003;THETA=0.0019;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11595239 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9913;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11595266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11595279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0003;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11595301 . CTAAAT C 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3685;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11595410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7077;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11595507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0027;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 11595564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8362;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11595589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1247;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0010;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 11595670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11595760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11595800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11595868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6473;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11595887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1073;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0005;THETA=0.0024;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 11595925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1074;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 11596070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11596093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8267;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11596109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11596133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11596149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1731;AVGPOST=0.9959;RSQ=0.9913;ERATE=0.0005;THETA=0.0022;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 11596230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11596231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1389;AVGPOST=0.9978;RSQ=0.9938;ERATE=0.0004;THETA=0.0048;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 11596250 . A AT 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11596297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11596376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0095;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11596447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5663;ERATE=0.0003;THETA=0.0070;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11596562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0449;AVGPOST=0.9974;RSQ=0.9809;ERATE=0.0003;THETA=0.0133;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 11596594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.8673;AVGPOST=0.9908;RSQ=0.9755;ERATE=0.0020;THETA=0.0051;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 11596613 . ACTC A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11596622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11596647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0681;AVGPOST=0.9949;RSQ=0.9692;ERATE=0.0005;THETA=0.0018;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 11596713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6897;AVGPOST=0.9924;RSQ=0.9884;ERATE=0.0004;THETA=0.0060;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 11596714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0213;AVGPOST=0.9972;RSQ=0.9502;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11596719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0335;AVGPOST=0.9980;RSQ=0.9748;ERATE=0.0003;THETA=0.0035;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11596733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9583;ERATE=0.0004;THETA=0.0050;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11596764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0028;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11596857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11596861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9055;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11596944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.9208;ERATE=0.0003;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11596952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11596965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7890;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11597056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11597071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9819;ERATE=0.0003;THETA=0.0038;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11597076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11597092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7902;AVGPOST=0.9957;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 11597107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6993;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597193 . GA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8594;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11597200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6765;ERATE=0.0006;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11597207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9449;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11597208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7581;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11597250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8892;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11597278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11597343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7418;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11597353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11597465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11597738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9551;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11597765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11597835 . TC T 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7096;ERATE=0.0012;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11597839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11597875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11597912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8548;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11597916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3265;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11597948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7169;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11598000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11598031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11598139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11598178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9417;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11598219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11598272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11598392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8334;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11598513 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11598633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=0.9983;RSQ=0.9306;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11598767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11598776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8243;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11598807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2377;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11598808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0746;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 11599000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11599012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11599062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11599166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11599214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11599237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1758;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0005;THETA=0.0032;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 11599364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8256;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11599382 . CT C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6188;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11599406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8954;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11599462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0451;AVGPOST=0.9989;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 11599509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9100;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11599515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0203;AVGPOST=0.9982;RSQ=0.9670;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11599612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.693;LDAF=0.0094;AVGPOST=0.9952;RSQ=0.7933;ERATE=0.0005;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11599661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0192;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11599842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9240;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11599844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0131;AVGPOST=0.9991;RSQ=0.9713;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11599861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11599864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6876;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11600054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7495;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11600067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7169;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11600150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6669;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11600203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11600258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11600267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11600347 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11600427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8308;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11600439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8568;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11600629 . AAAC A 179 PASS INDEL;BAVGPOST=0.987;BRSQ=0.412;LDAF=0.0174;AVGPOST=0.9855;RSQ=0.7138;ERATE=0.0006;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11600673 . T TA 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11600686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11600705 . T TA 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11600737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2518;AVGPOST=0.9964;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 11600746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0570;AVGPOST=0.9978;RSQ=0.9881;ERATE=0.0005;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11600792 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11600813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11600871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11600874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1784;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 11600908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11601001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7095;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11601121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8033;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11601122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11601196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9473;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11601206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1882;AVGPOST=0.9954;RSQ=0.9882;ERATE=0.0006;THETA=0.0006;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11601315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0574;AVGPOST=0.9971;RSQ=0.9842;ERATE=0.0005;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11601332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11601403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0559;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0031;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 11601477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11601584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9137;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11601592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0374;AVGPOST=0.9984;RSQ=0.9860;ERATE=0.0003;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11601625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8610;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11601659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11601726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11601836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11601914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11601917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0464;AVGPOST=0.9992;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 11601946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0029;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11601948 . G GA 419 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11601969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11602146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4756;AVGPOST=0.9956;RSQ=0.9925;ERATE=0.0007;THETA=0.0008;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 11602413 . AG A 136 PASS INDEL;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7336;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11602466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0067;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11602649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8764;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11602677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7981;AVGPOST=0.9963;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 11602715 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9716;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11602716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11602777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11602851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8233;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11602984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2022;AVGPOST=0.9969;RSQ=0.9922;ERATE=0.0005;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 11603033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8795;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11603143 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11603174 . AC A 2360 PASS INDEL;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0174;AVGPOST=0.9950;RSQ=0.8997;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11603214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6895;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11603323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11603383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2572;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 11603454 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11603559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1176;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 11603652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4133;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11603747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1178;AVGPOST=0.9987;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 11603812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4928;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11603849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6010;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11604004 . GAAGT G 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6733;ERATE=0.0007;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11604028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7947;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11604038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11604068 . T TC 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11604118 . CT C 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8567;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11604231 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11604382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11604588 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1166;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 11604605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0087;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11604940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11604955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605123 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11605149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1152;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 11605413 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11605422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11605490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8544;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11605558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11605652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6963;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0006;THETA=0.0007;AC=1522;AN=2184 GT:DS:GL:BD 0.69688642 1
1 11605822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4481;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 11605870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11605891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11605978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11605980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1064;AVGPOST=0.9974;RSQ=0.9887;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11606141 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6755;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11606176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1071;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11606206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5758;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 11606328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1144;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 11606748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11606760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11606823 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11606898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1268;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0016;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 11606921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11606954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8279;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11607061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11607078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4559;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 11607079 . AAG A 334 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9036;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11607115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5741;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0021;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 11607156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11607170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8503;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 11607197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8349;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 11607274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1407;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 11607358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4426;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 11607359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0102;AVGPOST=0.9985;RSQ=0.9462;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11607410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8714;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11607441 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11607612 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7165;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 11607695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8413;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11607748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11607751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11607767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9047;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11607808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11608082 rs35243894 G GA 27937 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2819;AVGPOST=0.9925;RSQ=0.9858;ERATE=0.0012;THETA=0.0008;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 11608196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8789;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11608226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11608238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11608250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6349;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11608275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7751;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11608360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11608440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11608485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11608486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2803;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 11608583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9282;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11608600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8872;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11608616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4401;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0008;THETA=0.0005;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 11608643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11608899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11608917 . GCA G 342 PASS INDEL;BAVGPOST=0.964;BRSQ=0.620;LDAF=0.0672;AVGPOST=0.9337;RSQ=0.5623;ERATE=0.0306;THETA=0.0029;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11609399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7173;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11609455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11609484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0649;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0009;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 11609519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11609531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0002;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11609546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1409;AVGPOST=0.9970;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 11609583 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11609751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11609891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9331;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11609958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6234;ERATE=0.0006;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11610059 . T TATAC 11252 PASS INDEL;BAVGPOST=0.900;BRSQ=0.787;LDAF=0.2900;AVGPOST=0.9122;RSQ=0.8484;ERATE=0.0058;THETA=0.0003;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 11610068 . C CAT 7232 PASS INDEL;BAVGPOST=0.913;BRSQ=0.795;LDAF=0.2676;AVGPOST=0.8996;RSQ=0.8128;ERATE=0.0126;THETA=0.0019;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 11610072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.513;LDAF=0.0480;AVGPOST=0.9404;RSQ=0.4959;ERATE=0.0102;THETA=0.0014;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11610100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4788;ERATE=0.0005;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11610122 . C CG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5559;ERATE=0.0006;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11610131 . G GAT 4653 PASS INDEL;BAVGPOST=0.988;BRSQ=0.905;LDAF=0.0816;AVGPOST=0.9619;RSQ=0.8013;ERATE=0.0030;THETA=0.0010;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 11610167 . TAG T 72 PASS INDEL;BAVGPOST=0.874;BRSQ=0.046;LDAF=0.0678;AVGPOST=0.9044;RSQ=0.3997;ERATE=0.0041;THETA=0.0059;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11610217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0568;AVGPOST=0.9964;RSQ=0.9718;ERATE=0.0005;THETA=0.0014;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11610264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11610418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8570;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11610430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9092;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11610458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11610559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9165;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11610567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0073;AVGPOST=0.9976;RSQ=0.8863;ERATE=0.0003;THETA=0.0048;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11610615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.2650;AVGPOST=0.9774;RSQ=0.9600;ERATE=0.0004;THETA=0.0008;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 11610675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11610791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8549;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11610827 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11610862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11610954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7747;ERATE=0.0002;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11610969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11611030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0002;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11611041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11611106 . C CTTAA 400 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11611295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11611329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11611357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8665;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11611526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0736;AVGPOST=0.9978;RSQ=0.9884;ERATE=0.0004;THETA=0.0063;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11611679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11611744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9980;RSQ=0.9675;ERATE=0.0004;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11611877 . ATTC A 1089 PASS INDEL;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0191;AVGPOST=0.9912;RSQ=0.8207;ERATE=0.0004;THETA=0.0056;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11611889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8513;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11611976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4788;AVGPOST=0.9935;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 11611999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0856;AVGPOST=0.9983;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 11612038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.960;LDAF=0.1588;AVGPOST=0.9755;RSQ=0.9311;ERATE=0.0004;THETA=0.0007;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 11612103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.573;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6552;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11612179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11612247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.569;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.7161;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11612286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0084;AVGPOST=0.9977;RSQ=0.9068;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11612297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0167;AVGPOST=0.9977;RSQ=0.9368;ERATE=0.0005;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11612371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0663;AVGPOST=0.9961;RSQ=0.9790;ERATE=0.0007;THETA=0.0033;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 11612443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0722;AVGPOST=0.9980;RSQ=0.9863;ERATE=0.0005;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 11612497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0671;AVGPOST=0.9970;RSQ=0.9825;ERATE=0.0007;THETA=0.0010;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 11612679 . ATATG A 9259 PASS INDEL;BAVGPOST=0.843;BRSQ=0.708;LDAF=0.4883;AVGPOST=0.7957;RSQ=0.6584;ERATE=0.0171;THETA=0.0035;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 11612773 . ATG A 8355 PASS INDEL;BAVGPOST=0.834;BRSQ=0.695;LDAF=0.4692;AVGPOST=0.8309;RSQ=0.7377;ERATE=0.0089;THETA=0.0006;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 11612775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8295;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11612828 . AT A 5499 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0926;AVGPOST=0.9975;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 11612855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4539;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11612999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6374;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11613070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0135;AVGPOST=0.9992;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11613133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0806;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 11613442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11613481 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11613541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11613798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11613849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.986;LDAF=0.4959;AVGPOST=0.9914;RSQ=0.9883;ERATE=0.0010;THETA=0.0017;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 11613935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11613936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11613946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4607;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11614266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11614267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11614295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7078;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11614369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7314;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11614373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11614411 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1721;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 11614450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1183;AVGPOST=0.9971;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 11614463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.9033;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11614494 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3895;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11614608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11615134 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9062;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11615159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9622;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11615194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2160;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0022;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 11615289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11615356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11615357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11615377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11615402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5694;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0773;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 11615567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11615604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7039;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11615609 . G GA 50 PASS INDEL;BAVGPOST=0.996;BRSQ=0.664;LDAF=0.0080;AVGPOST=0.9910;RSQ=0.5605;ERATE=0.0014;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11615652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615663 . CTCT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615690 . CTTCT C 270 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11615706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7330;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11615789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11615799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11615827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11615922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11615991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5450;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11616053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8345;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11616229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11616241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6904;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11616321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11616372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.900;LDAF=0.0405;AVGPOST=0.9930;RSQ=0.9319;ERATE=0.0005;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11616410 . CTTATA C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6082;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11616493 rs35983758 AAT A 20362 PASS INDEL;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.2447;AVGPOST=0.9270;RSQ=0.8871;ERATE=0.0122;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 11616519 . AT A 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.3408;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11616555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4672;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 11616728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.707;LDAF=0.0401;AVGPOST=0.9704;RSQ=0.6882;ERATE=0.0018;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 11617038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0809;AVGPOST=0.9937;RSQ=0.9661;ERATE=0.0007;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 11617179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9742;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11617492 . CTCTT C 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5130;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11617534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11617552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8001;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11617853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11617857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11617986 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11618312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0068;AVGPOST=0.9942;RSQ=0.7022;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11618364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4327;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 11618446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9702;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 11618519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4330;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 11618630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11618653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.9701;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 11618687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9562;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 11618724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 11618733 rs58491971 T TTTCTAG 108240 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4320;AVGPOST=0.9957;RSQ=0.9931;ERATE=0.0012;THETA=0.0006;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 11618765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1130;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 11618777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5231;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 11618822 rs67550059 GGT G 55203 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4811;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 11618898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4327;AVGPOST=0.9973;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 11618976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11619029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1137;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 11619131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4336;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 11619233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11619271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0002;THETA=0.0027;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11619421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7797;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11619454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7854;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11619481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3005;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 11619608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11619669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11619759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.9695;AVGPOST=0.9983;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 11620047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11620056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11620184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11620298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9443;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11620303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11620319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11620403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11620406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11620505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11620558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5763;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11620676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11620729 . AG A 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11620753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6448;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11620766 . CATAA C 369 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11620769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7008;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11621058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11621072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9976;RSQ=0.9686;ERATE=0.0004;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11621497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11621651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9989;RSQ=0.9703;ERATE=0.0002;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11621693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7153;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11621765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11621858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11621860 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9722;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11621907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8495;AVGPOST=0.9907;RSQ=0.9728;ERATE=0.0005;THETA=0.0002;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 11621933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11621996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11622052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11622207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6513;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11622213 . AAT A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11622339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11622369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11622376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11622454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0266;AVGPOST=0.9965;RSQ=0.9549;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11622582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1139;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0004;THETA=0.0007;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 11622828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6795;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11622920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11622998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11623072 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1141;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 11623276 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0170;AVGPOST=0.9986;RSQ=0.9661;ERATE=0.0004;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11623277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7533;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11623280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11623418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11623444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9418;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11623509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9334;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11623554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11623575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11623656 . CT C 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6975;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11623716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11623731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0300;AVGPOST=0.9992;RSQ=0.9872;ERATE=0.0003;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11623927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11623954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.961;LDAF=0.1099;AVGPOST=0.9900;RSQ=0.9599;ERATE=0.0006;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 11623962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11624001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9403;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11624036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.6007;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11624063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11624144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0150;AVGPOST=0.9971;RSQ=0.9107;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11624193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8405;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11624195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11624254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11624299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.572;LDAF=0.0277;AVGPOST=0.9744;RSQ=0.6373;ERATE=0.0047;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11624378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0878;AVGPOST=0.9975;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 11624401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.932;LDAF=0.3941;AVGPOST=0.9498;RSQ=0.9219;ERATE=0.0090;THETA=0.0002;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 11624410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0208;AVGPOST=0.9987;RSQ=0.9800;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11624621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9610;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11624627 . ATG A 375 PASS INDEL;BAVGPOST=0.973;BRSQ=0.653;LDAF=0.0537;AVGPOST=0.9514;RSQ=0.6070;ERATE=0.0206;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11624645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11624651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3483;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 11624678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0733;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11624692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6185;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11624776 rs57517437 CT C 6173 PASS INDEL;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0755;AVGPOST=0.9948;RSQ=0.9732;ERATE=0.0009;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 11624781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9978;RSQ=0.3338;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11624789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3409;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 11624877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11624897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11624902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11624981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0465;AVGPOST=0.9994;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11625115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9122;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11625180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9037;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11625254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7165;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11625363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11625430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0165;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11625441 . G GA 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11625560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3454;AVGPOST=0.9890;RSQ=0.9812;ERATE=0.0015;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 11625607 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5071;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11625626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0482;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 11625680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3494;AVGPOST=0.9934;RSQ=0.9883;ERATE=0.0009;THETA=0.0010;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 11625695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.7438;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11625769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0247;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0001;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11625770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8328;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11625771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0082;AVGPOST=0.9962;RSQ=0.8103;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11625938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3489;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 11626001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11626052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9292;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11626107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8564;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11626210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0391;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11626233 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11626255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11626500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0261;AVGPOST=0.9987;RSQ=0.9784;ERATE=0.0004;THETA=0.0013;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11626884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8818;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11626903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4209;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0007;THETA=0.0002;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 11627005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3484;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0009;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 11627050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5300;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3962;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0007;THETA=0.0003;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 11627129 . G GTT 1479 PASS INDEL;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0392;AVGPOST=0.9963;RSQ=0.9629;ERATE=0.0008;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11627198 rs10689627 T TTA 6461 PASS INDEL;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0418;AVGPOST=0.9964;RSQ=0.9637;ERATE=0.0010;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11627199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6732;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11627330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0002;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11627509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0868;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0002;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 11627528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627576 . TACCCA T 304 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11627642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11627672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11627798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7413;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11627865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3973;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 11627915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11628066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9532;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11628102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11628115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11628171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11628173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3476;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 11628242 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0065;AVGPOST=0.9966;RSQ=0.8097;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11628281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2134;AVGPOST=0.9934;RSQ=0.9837;ERATE=0.0005;THETA=0.0008;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 11628343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11628464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2977;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 11628537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11628771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11628823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5309;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11628850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11628876 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11628911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0632;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 11629020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9168;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11629179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6140;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11629241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11629358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11629427 . AAT A 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11629499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8900;ERATE=0.0002;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11629576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11629765 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11629874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11630012 . T TG 2000 PASS INDEL;BAVGPOST=0.956;BRSQ=0.874;LDAF=0.1889;AVGPOST=0.9571;RSQ=0.8993;ERATE=0.0005;THETA=0.0003;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 11630158 . G GT 23689 PASS INDEL;BAVGPOST=0.985;BRSQ=0.966;LDAF=0.2239;AVGPOST=0.9953;RSQ=0.9894;ERATE=0.0004;THETA=0.0002;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 11630159 . T TC 1637 PASS INDEL;BAVGPOST=0.956;BRSQ=0.873;LDAF=0.1887;AVGPOST=0.9611;RSQ=0.9062;ERATE=0.0005;THETA=0.0006;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 11630161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5650;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11630213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3690;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11630356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9143;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11630466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11630490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6706;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11630574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7175;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11630626 . GTAAATA G 1523 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9394;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11630908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9084;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11630962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11630978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9227;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11631079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11631092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8629;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11631102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6731;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11631151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5107;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11631202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0002;THETA=0.0042;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11631365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11631455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11631491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11631570 . A AT 337 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8804;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11631577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8521;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11631622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0479;AVGPOST=0.9991;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 11631741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8661;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11631756 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5877;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11631771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5127;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11631923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11632015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9282;AVGPOST=0.9975;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 11632150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11632201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7192;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11632363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0217;AVGPOST=0.9953;RSQ=0.9175;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11632432 . A ATT 3047 PASS INDEL;BAVGPOST=0.947;BRSQ=0.830;LDAF=0.2215;AVGPOST=0.9300;RSQ=0.8266;ERATE=0.0250;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 11632454 . A AACTC 472 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11632523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0637;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 11632559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6689;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11632627 . C CTT 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11632632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3532;AVGPOST=0.9930;RSQ=0.9890;ERATE=0.0006;THETA=0.0005;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 11632658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8969;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11632666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5838;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11632730 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8348;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11632870 . A ATACTT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11632953 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.6423;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11633050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8163;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11633072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6791;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11633122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11633124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8034;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11633142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11633188 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.9223;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11633238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9407;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11633285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0098;AVGPOST=0.9985;RSQ=0.9400;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11633287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11633315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7904;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11633325 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11633349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7221;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11633423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11633515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11633528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7618;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11633529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11633686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11633737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11633924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11634114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9991;RSQ=0.9861;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11634133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7103;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11634154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11634206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11634229 . C CTGAA 1341 PASS INDEL;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8495;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11634240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.8088;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11634298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9987;RSQ=0.9724;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11634309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.829;LDAF=0.0281;AVGPOST=0.9909;RSQ=0.8722;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11634408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0137;AVGPOST=0.9984;RSQ=0.9696;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11634550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1829;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 11634739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 11634782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7767;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11634822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11634861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5343;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 11634906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9573;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11634945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11635043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11635134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11635137 . C CA 298 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9969;RSQ=0.9019;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11635244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0110;AVGPOST=0.9992;RSQ=0.9667;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11635245 . GA G 809 PASS INDEL;BAVGPOST=0.957;BRSQ=0.555;LDAF=0.0681;AVGPOST=0.9269;RSQ=0.5463;ERATE=0.0198;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11635260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5328;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 11635341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11635361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6514;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11635560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7263;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11635584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11635634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8758;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11635696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9817;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11635723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5381;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11635724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1182;AVGPOST=0.9988;RSQ=0.9959;ERATE=0.0002;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 11635766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9396;ERATE=0.0002;THETA=0.0029;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11635864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11636060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0085;AVGPOST=0.9980;RSQ=0.9236;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11636191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11636216 . T TAG 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11636217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6337;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11636370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11636464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11636476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0257;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11636546 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11636560 . GCTACTCAGCAGCCA G 772 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11636709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11636764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5373;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0010;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 11636804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7417;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11636872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11636918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9388;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11636977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0504;AVGPOST=0.9954;RSQ=0.9620;ERATE=0.0003;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 11637091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8171;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11637125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7988;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11637140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11637423 . A AC 3213 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9992;RSQ=0.9809;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11637457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0284;AVGPOST=0.9968;RSQ=0.9593;ERATE=0.0010;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11637469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9830;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11637471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7433;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11637629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9494;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11637679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8969;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11637709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9508;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0004;THETA=0.0002;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 11637918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.746;LDAF=0.0208;AVGPOST=0.9845;RSQ=0.7186;ERATE=0.0052;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11637919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0002;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11637928 . T TG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11637985 . A AT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4643;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11637998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9093;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11638000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11638010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11638053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9507;AVGPOST=0.9987;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 11638109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11638230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7602;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11638237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7025;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11638297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1170;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 11638320 . CA C 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8096;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11638323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5386;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0003;THETA=0.0018;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 11638349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11638351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8131;ERATE=0.0003;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11638451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7223;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11638486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11638494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0264;AVGPOST=0.9984;RSQ=0.9826;ERATE=0.0002;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11638562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11638571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.935;LDAF=0.0816;AVGPOST=0.9956;RSQ=0.9762;ERATE=0.0002;THETA=0.0011;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 11638586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11638710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8119;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11638765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3085;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 11638809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11638812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9866;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11638831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5473;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11638890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.817;LDAF=0.0368;AVGPOST=0.9966;RSQ=0.9618;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11638904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7060;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11638916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11638924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7106;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11638934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0049;AVGPOST=0.9945;RSQ=0.5423;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11639033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3106;ERATE=0.0009;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11639041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11639129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.588;LDAF=0.0261;AVGPOST=0.9699;RSQ=0.5613;ERATE=0.0074;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11639130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4520;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11639136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.665;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4073;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11639138 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11639222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0620;AVGPOST=0.9973;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 11639277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.931;LDAF=0.0699;AVGPOST=0.9925;RSQ=0.9536;ERATE=0.0005;THETA=0.0010;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 11639306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7526;ERATE=0.0006;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11639341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0053;AVGPOST=0.9908;RSQ=0.3479;ERATE=0.0009;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11639502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0258;AVGPOST=0.9992;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11639567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9985;RSQ=0.9759;ERATE=0.0005;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11639641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.784;LDAF=0.0086;AVGPOST=0.9960;RSQ=0.8285;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11639652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.7913;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11639766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9290;ERATE=0.0005;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11639840 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1614;AVGPOST=0.9955;RSQ=0.9857;ERATE=0.0009;THETA=0.0006;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 11639871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.477;LDAF=0.9629;AVGPOST=0.9705;RSQ=0.6880;ERATE=0.0011;THETA=0.0005;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 11639875 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0057;AVGPOST=0.9953;RSQ=0.6802;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11639897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.651;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.6585;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11639942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11639967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4155;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11639977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6995;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11640027 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7095;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11640069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7929;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11640087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11640186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11640206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11640225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6367;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11640258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7873;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11640281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11640317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3074;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 11640325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11640353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11640367 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11640425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6140;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11640457 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1190;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0002;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 11640462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.548;LDAF=0.0088;AVGPOST=0.9926;RSQ=0.7207;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11640517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.573;LDAF=0.0046;AVGPOST=0.9960;RSQ=0.6369;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11640539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1241;AVGPOST=0.9974;RSQ=0.9902;ERATE=0.0005;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 11640587 . TC T 6185 PASS INDEL;BAVGPOST=0.887;BRSQ=0.784;LDAF=0.2432;AVGPOST=0.9203;RSQ=0.8739;ERATE=0.0056;THETA=0.0002;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 11640687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0187;AVGPOST=0.9963;RSQ=0.9128;ERATE=0.0006;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11640712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0049;AVGPOST=0.9978;RSQ=0.8320;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11640745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1238;AVGPOST=0.9978;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 11640836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0118;AVGPOST=0.9970;RSQ=0.9069;ERATE=0.0006;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11640863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11640866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11640914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.959;LDAF=0.3046;AVGPOST=0.9910;RSQ=0.9858;ERATE=0.0016;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 11640959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6184;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11640994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11641019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4128;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11641024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0064;AVGPOST=0.9972;RSQ=0.8226;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11641057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3082;AVGPOST=0.9954;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 11641157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2884;AVGPOST=0.9915;RSQ=0.9870;ERATE=0.0011;THETA=0.0007;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 11641240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5995;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11641310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4207;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11641350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0109;AVGPOST=0.9971;RSQ=0.8872;ERATE=0.0005;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11641421 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1246;AVGPOST=0.9975;RSQ=0.9901;ERATE=0.0005;THETA=0.0009;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 11641470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9485;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11641484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.642;LDAF=0.0054;AVGPOST=0.9959;RSQ=0.7271;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11641490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5538;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11641541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11641568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6945;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11641649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0079;AVGPOST=0.9972;RSQ=0.8833;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11641670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11641693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11641738 . TGTA T 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11641747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.717;LDAF=0.0059;AVGPOST=0.9970;RSQ=0.7901;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11641749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11641801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3370;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 11641806 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11641812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7736;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11641826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6257;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11642046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8826;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11642055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7556;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11642083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11642160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8013;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11642210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8219;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11642335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11642527 . CA C 2329 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11642530 . TC T 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5621;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11642541 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9987;RSQ=0.9779;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11642629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8438;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11642637 rs57462991 A AC 99153 PASS INDEL;BAVGPOST=0.991;BRSQ=0.536;LDAF=0.9875;AVGPOST=0.9850;RSQ=0.5472;ERATE=0.0025;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 11642665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9830;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11642677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1199;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 11642729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11642730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0057;AVGPOST=0.9978;RSQ=0.8409;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11642737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11642761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8053;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11642765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.591;LDAF=0.0100;AVGPOST=0.9870;RSQ=0.5222;ERATE=0.0021;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11642788 rs61368684 A AG 78459 PASS INDEL;BAVGPOST=0.995;BRSQ=0.632;LDAF=0.9831;AVGPOST=0.9811;RSQ=0.5712;ERATE=0.0026;THETA=0.0005;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 11642890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0184;AVGPOST=0.9972;RSQ=0.9424;ERATE=0.0005;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11642955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11643051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11643080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7183;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11643226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5650;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11643250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.805;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9480;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11643288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11643395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11643441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9602;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11643517 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11643548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0140;AVGPOST=0.9989;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11643578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6985;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11643758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9666;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11643900 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9990;RSQ=0.9846;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11643920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11644019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0105;AVGPOST=0.9996;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11644063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11644241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7712;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11644352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0106;AVGPOST=0.9985;RSQ=0.9466;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11644592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11644656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11644660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.4168;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11644762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11644770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11644771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11644788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9607;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11644914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9650;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11644918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8101;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11645037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6876;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11645073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6778;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11645114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11645200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11645249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0104;AVGPOST=0.9936;RSQ=0.7772;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11645383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3123;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11645395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8829;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11645427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11645431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9337;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11645447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8043;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11645559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11645577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9611;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11645593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11645632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11645682 . TC T 1183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9270;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11645715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0639;AVGPOST=0.9968;RSQ=0.9813;ERATE=0.0004;THETA=0.0004;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 11645778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8998;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11645966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11646043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7588;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11646203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11646364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7927;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6438;AVGPOST=0.9902;RSQ=0.9853;ERATE=0.0006;THETA=0.0008;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 11646436 . CA C 346 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6809;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8844;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11646623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11646692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11646946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11646948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11647253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0773;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 11647271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11647349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11647394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11647437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0080;AVGPOST=0.9988;RSQ=0.9408;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11647495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6426;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11647643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11647729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11647779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3516;AVGPOST=0.9969;RSQ=0.9957;ERATE=0.0008;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 11647785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11648457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11648491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6878;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11648713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7321;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11648733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8906;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11648772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7120;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11648806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5104;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11648811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11648818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11648946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1445;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0012;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 11649066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2257;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 11649144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11649308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11649341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11649348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2255;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 11649407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3097;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 11649491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11649513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11649514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6751;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11649536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1441;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0004;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 11649551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5843;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11649729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11649819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11650067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11650124 . TGTCCAAGAC T 220 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11650207 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6640;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11650283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11650477 . TTTCTC T 439 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11650493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8495;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11650637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11650704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7329;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11650713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11650728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11650802 . T TC 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.5464;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11650826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1439;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0021;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 11650998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0572;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11651164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11651246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11651405 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11651426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11651486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0062;AVGPOST=0.9941;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11651549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0713;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 11651956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11652188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11652268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652345 . AAAAG A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11652561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5798;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11652665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5587;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11652717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6619;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11652736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11652745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8755;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11652762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.927;LDAF=0.0460;AVGPOST=0.9904;RSQ=0.9084;ERATE=0.0007;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 11652869 rs60355465 TA T 704 PASS INDEL;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0203;AVGPOST=0.9948;RSQ=0.8885;ERATE=0.0009;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11653256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0043;AVGPOST=0.9944;RSQ=0.4485;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11653258 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1450;AVGPOST=0.9972;RSQ=0.9917;ERATE=0.0006;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 11653522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11653564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11653581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5540;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11653596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7872;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11653615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0573;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11653633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11653646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8877;ERATE=0.0008;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11653660 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4941;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11653677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3434;AVGPOST=0.9788;RSQ=0.9642;ERATE=0.0041;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 11653950 rs35901151 C CG 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3967;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11653983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2721;AVGPOST=0.9942;RSQ=0.9884;ERATE=0.0005;THETA=0.0010;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 11654021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7118;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11654060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1964;AVGPOST=0.9955;RSQ=0.9898;ERATE=0.0009;THETA=0.0002;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 11654070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1955;AVGPOST=0.9954;RSQ=0.9894;ERATE=0.0006;THETA=0.0007;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 11654089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0188;AVGPOST=0.9986;RSQ=0.9647;ERATE=0.0004;THETA=0.0066;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11654131 . G GA 120 PASS INDEL;BAVGPOST=0.989;BRSQ=0.497;LDAF=0.0174;AVGPOST=0.9894;RSQ=0.7729;ERATE=0.0013;THETA=0.0037;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11654196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8848;ERATE=0.0004;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11654240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11654303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.477;LDAF=0.0232;AVGPOST=0.9694;RSQ=0.4838;ERATE=0.0075;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11654421 rs113987666 CATAA C 4749 PASS INDEL;BAVGPOST=0.991;BRSQ=0.889;LDAF=0.0354;AVGPOST=0.9947;RSQ=0.9470;ERATE=0.0008;THETA=0.0076;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 11654421 . TAAA T 475 PASS INDEL;BAVGPOST=0.992;BRSQ=0.860;LDAF=0.0255;AVGPOST=0.9911;RSQ=0.8850;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11654427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3237;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0004;THETA=0.0029;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 11654483 . GA G 88 PASS INDEL;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0059;AVGPOST=0.9919;RSQ=0.4202;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11654548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5061;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11654564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7056;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11654591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7376;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11654730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4705;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11654766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7544;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11654780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9491;AVGPOST=0.9987;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=2073;AN=2184 GT:DS:GL:BD 0.94917583 1
1 11654864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4961;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11654902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.9017;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11655088 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5622;AVGPOST=0.9944;RSQ=0.9915;ERATE=0.0007;THETA=0.0028;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 11655171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.2828;AVGPOST=0.9962;RSQ=0.9935;ERATE=0.0004;THETA=0.0007;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 11655240 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9788;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11655250 . G GC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7027;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11655467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2461;AVGPOST=0.9965;RSQ=0.9924;ERATE=0.0007;THETA=0.0004;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 11655556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0241;AVGPOST=0.9978;RSQ=0.9672;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11655615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.847;LDAF=0.2289;AVGPOST=0.9355;RSQ=0.8404;ERATE=0.0212;THETA=0.0009;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 11655710 . C CA 202 PASS INDEL;BAVGPOST=0.996;BRSQ=0.578;LDAF=0.0078;AVGPOST=0.9897;RSQ=0.4706;ERATE=0.0021;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11655818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7000;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11655823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5357;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11656106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8944;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11656230 . C CA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0042;AVGPOST=0.9948;RSQ=0.4888;ERATE=0.0008;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11656296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0137;AVGPOST=0.9983;RSQ=0.9467;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11656300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9655;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11656461 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2025;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 11656463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11656473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11656555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9407;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11656786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11656849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9602;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11656856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9983;RSQ=0.9545;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11656917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5530;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0007;THETA=0.0002;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 11656962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0091;AVGPOST=0.9972;RSQ=0.8970;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11656974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0079;AVGPOST=0.9976;RSQ=0.8906;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11657021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0239;AVGPOST=0.9987;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11657086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6062;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0009;THETA=0.0006;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 11657099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11657100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11657186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.544;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5227;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11657285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5836;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11657338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2386;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0019;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 11657470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11657474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7907;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11657547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11657662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2721;AVGPOST=0.9948;RSQ=0.9899;ERATE=0.0008;THETA=0.0003;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 11657712 . TA T 2441 PASS INDEL;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0301;AVGPOST=0.9982;RSQ=0.9736;ERATE=0.0008;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11657744 . CCTT C 24866 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2703;AVGPOST=0.9940;RSQ=0.9875;ERATE=0.0009;THETA=0.0008;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 11658150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11658186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3541;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11658188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0527;AVGPOST=0.9972;RSQ=0.9760;ERATE=0.0005;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 11658226 . GC G 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4771;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11658271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11658275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8911;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11658355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11658497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11658517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11658573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11658588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11658592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11658628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11658699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11658755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2017;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 11658896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8349;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11658921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0187;AVGPOST=0.9989;RSQ=0.9720;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11658939 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6953;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11659146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0296;AVGPOST=0.9979;RSQ=0.9743;ERATE=0.0005;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 11659156 . T TATTTA 226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7971;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11659180 . T TA 97 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5072;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11659215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11659333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6241;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11659401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11659422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11659430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5081;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11659526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5960;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11659548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11659618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11659627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11659643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7855;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11659775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9251;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11660033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11660134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7895;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11660154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11660287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0913;AVGPOST=0.9976;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 11660570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0282;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0004;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11660577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0925;AVGPOST=0.9959;RSQ=0.9835;ERATE=0.0003;THETA=0.0008;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 11660581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11660594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11660693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0438;AVGPOST=0.9985;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 11660746 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11660755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7664;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11660826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8623;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11660864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9617;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11661023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11661057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11661079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.931;LDAF=0.0311;AVGPOST=0.9949;RSQ=0.9322;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11661153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8749;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11661343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.9109;AVGPOST=0.9973;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=1990;AN=2184 GT:DS:GL:BD 0.91117215 1
1 11661686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11661690 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7129;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11661735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11661760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0250;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11661816 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1999;AVGPOST=0.9959;RSQ=0.9906;ERATE=0.0005;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 11661824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9798;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11661917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0172;AVGPOST=0.9980;RSQ=0.9561;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11661948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8213;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11662075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11662123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.1751;AVGPOST=0.9910;RSQ=0.9805;ERATE=0.0015;THETA=0.0006;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 11662224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8558;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11662281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11662282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9683;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11662337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11662466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8932;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11662544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11662561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11662617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5666;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11662727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0151;AVGPOST=0.9968;RSQ=0.9078;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11662929 . CG C 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11662962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5632;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11662984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0261;AVGPOST=0.9993;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11662992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6830;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11663077 . CAG C 240 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7975;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11663160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11663166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8070;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11663378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0260;AVGPOST=0.9989;RSQ=0.9809;ERATE=0.0003;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11663650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5131;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11663651 . G GT 396 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.5645;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11663692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11663693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11663694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1772;AVGPOST=0.9955;RSQ=0.9883;ERATE=0.0004;THETA=0.0005;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 11663903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11663911 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11664124 . GATT G 1169 PASS INDEL;BAVGPOST=0.996;BRSQ=0.721;LDAF=0.0104;AVGPOST=0.9947;RSQ=0.8200;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11664200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1369;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0011;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 11664279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0881;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 11664347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11664433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11664493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11664631 . TTC T 1681 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11664694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11664772 . TTA T 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11664820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8198;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11664864 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1381;AVGPOST=0.9962;RSQ=0.9889;ERATE=0.0005;THETA=0.0048;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 11664997 . A AT 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11665166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0741;AVGPOST=0.9975;RSQ=0.9861;ERATE=0.0005;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 11665183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0045;AVGPOST=0.9962;RSQ=0.6813;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11665245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1049;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 11665299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11665336 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5851;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11665438 . TG T 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.3136;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11665441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8827;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11665552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11665702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8776;ERATE=0.0004;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11665845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.954;LDAF=0.4070;AVGPOST=0.9747;RSQ=0.9659;ERATE=0.0023;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 11665894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.554;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6456;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11665973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9564;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11665974 . AAAAC A 903 PASS INDEL;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0110;AVGPOST=0.9928;RSQ=0.7340;ERATE=0.0015;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11666074 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11666181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11666359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7861;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11666430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3995;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0005;THETA=0.0007;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 11666446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4344;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11666457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3997;AVGPOST=0.9959;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 11666474 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2652;AVGPOST=0.9949;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 11666662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11666754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8786;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11667014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0434;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 11667145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0094;AVGPOST=0.9978;RSQ=0.9055;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11667356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4254;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11667389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6327;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11667453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11667677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7094;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11667730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6388;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667801 . T TG 179 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9421;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11667831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11667911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3982;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0006;THETA=0.0006;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 11668099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1951;AVGPOST=0.9971;RSQ=0.9931;ERATE=0.0004;THETA=0.0006;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 11668120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11668129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6996;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11668156 . CTT C 623 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8822;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11668243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11668390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11668415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0003;THETA=0.0068;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11668482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11668483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11668573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11668616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11669018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 11669040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0284;AVGPOST=0.9983;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11669116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.596;LDAF=0.0130;AVGPOST=0.9900;RSQ=0.7026;ERATE=0.0009;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11669833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11670021 . T TA 260 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8827;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11670130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.955;LDAF=0.3245;AVGPOST=0.9537;RSQ=0.9220;ERATE=0.0022;THETA=0.0043;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 11670209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.564;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6079;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11670231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0093;AVGPOST=0.9947;RSQ=0.7791;ERATE=0.0007;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11670236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11670349 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11670572 . G GC 4375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9950;RSQ=0.9408;ERATE=0.0003;THETA=0.0047;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11670660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7892;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11670777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8128;ERATE=0.0006;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11670795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9460;ERATE=0.0004;THETA=0.0074;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11670821 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11670951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11670954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5515;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11670963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11671013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0132;AVGPOST=0.9989;RSQ=0.9606;ERATE=0.0003;THETA=0.0016;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11671026 . ATTCT A 130 PASS INDEL;BAVGPOST=0.992;BRSQ=0.755;LDAF=0.0213;AVGPOST=0.9892;RSQ=0.8207;ERATE=0.0005;THETA=0.0034;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11671039 rs10568506 CTTTCT C 2221 PASS INDEL;BAVGPOST=0.990;BRSQ=0.870;LDAF=0.0302;AVGPOST=0.9962;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11671042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.795;LDAF=0.0339;AVGPOST=0.9915;RSQ=0.8997;ERATE=0.0008;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 11671090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.460;LDAF=0.0127;AVGPOST=0.9873;RSQ=0.5996;ERATE=0.0011;THETA=0.0055;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11671121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.437;LDAF=0.0059;AVGPOST=0.9922;RSQ=0.4403;ERATE=0.0014;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11671280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0358;AVGPOST=0.9872;RSQ=0.8549;ERATE=0.0018;THETA=0.0020;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 11671421 . A AG 18 PASS INDEL;BAVGPOST=0.996;BRSQ=0.422;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3127;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11671445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.848;LDAF=0.0170;AVGPOST=0.9934;RSQ=0.8605;ERATE=0.0007;THETA=0.0031;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11671528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11671581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7007;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11671645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11671668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11671676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5173;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11671747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8800;ERATE=0.0005;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11671896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11671897 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11672022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0333;AVGPOST=0.9972;RSQ=0.9651;ERATE=0.0004;THETA=0.0019;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11672165 . C CA 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.4992;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7713;ERATE=0.0005;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11672228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0193;AVGPOST=0.9968;RSQ=0.9278;ERATE=0.0005;THETA=0.0028;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11672252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0182;AVGPOST=0.9963;RSQ=0.9196;ERATE=0.0005;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11672507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0003;THETA=0.0033;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11672612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9526;ERATE=0.0003;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11672632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7751;ERATE=0.0008;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11672656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9467;ERATE=0.0003;THETA=0.0076;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11672700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.9965;AVGPOST=0.9988;RSQ=0.8808;ERATE=0.0004;THETA=0.0064;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 11672796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11672902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11672956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11673052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11673065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9500;ERATE=0.0004;THETA=0.0115;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11673208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11673240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8836;ERATE=0.0004;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11673245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0006;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11673259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0016;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11673275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0215;AVGPOST=0.9978;RSQ=0.9572;ERATE=0.0005;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11673405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8685;ERATE=0.0014;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11673429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9432;ERATE=0.0007;THETA=0.0161;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11673506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0376;AVGPOST=0.9959;RSQ=0.9548;ERATE=0.0022;THETA=0.0137;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11673582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0245;AVGPOST=0.9983;RSQ=0.9707;ERATE=0.0015;THETA=0.0020;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11673618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11673653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8244;ERATE=0.0009;THETA=0.0117;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11673671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.913;LDAF=0.0440;AVGPOST=0.9853;RSQ=0.8701;ERATE=0.0062;THETA=0.0026;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11673807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0114;AVGPOST=0.9976;RSQ=0.9099;ERATE=0.0004;THETA=0.0050;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11673810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11673826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7352;ERATE=0.0003;THETA=0.0061;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11673829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0096;AVGPOST=0.9972;RSQ=0.8794;ERATE=0.0009;THETA=0.0049;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11673849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8306;ERATE=0.0021;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11673872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0087;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11673888 . GGT G 8669 PASS INDEL;BAVGPOST=0.904;BRSQ=0.834;LDAF=0.3495;AVGPOST=0.8990;RSQ=0.8378;ERATE=0.0065;THETA=0.0003;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 11673965 rs34013724 TGG T 30020 PASS INDEL;BAVGPOST=0.906;BRSQ=0.840;LDAF=0.3674;AVGPOST=0.9115;RSQ=0.8696;ERATE=0.0006;THETA=0.0038;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 11673967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0096;AVGPOST=0.9961;RSQ=0.8518;ERATE=0.0005;THETA=0.0136;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11673983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0195;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11674030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0135;AVGPOST=0.9936;RSQ=0.8186;ERATE=0.0045;THETA=0.0104;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11674037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11674047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0413;AVGPOST=0.9966;RSQ=0.9704;ERATE=0.0009;THETA=0.0169;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11674096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11674136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11674147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.964;LDAF=0.4193;AVGPOST=0.9752;RSQ=0.9638;ERATE=0.0160;THETA=0.0061;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 11674176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0005;THETA=0.0048;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11674260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11674278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9683;ERATE=0.0006;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11674310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0004;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11674323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11674356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11674406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0010;THETA=0.0015;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11674508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9770;ERATE=0.0003;THETA=0.0038;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11674549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1671;AVGPOST=0.9933;RSQ=0.9818;ERATE=0.0005;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 11674655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2708;AVGPOST=0.9926;RSQ=0.9858;ERATE=0.0005;THETA=0.0008;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 11674743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11674772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9408;ERATE=0.0003;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11674786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7288;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11675437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7893;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11675561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8735;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11675597 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11675609 rs35269770 T TA 5629 PASS INDEL;BAVGPOST=0.989;BRSQ=0.925;LDAF=0.0785;AVGPOST=0.9677;RSQ=0.8451;ERATE=0.0082;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 11675727 . A AC 13 PASS INDEL;BAVGPOST=0.996;BRSQ=0.480;LDAF=0.0083;AVGPOST=0.9940;RSQ=0.7407;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11675736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0002;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11675911 . TCA T 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5542;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11675960 . ACAT A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5082;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11675981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0364;AVGPOST=0.9961;RSQ=0.9589;ERATE=0.0005;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 11676146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9986;RSQ=0.9606;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11676167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676428 . GA G 2772 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0168;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0002;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11676433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11676641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11676650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11676775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9357;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11676805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0455;AVGPOST=0.9986;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11676955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0189;AVGPOST=0.9988;RSQ=0.9753;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11676956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11676988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.8050;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11677152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9674;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11677201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11677271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11677458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0163;AVGPOST=0.9937;RSQ=0.8573;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11677526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0521;AVGPOST=0.9981;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 11677566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0457;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11677598 rs35452024 CA C 5517 PASS INDEL;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0486;AVGPOST=0.9969;RSQ=0.9737;ERATE=0.0007;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 11677622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8730;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11677625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9507;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11677652 . G GA 1960 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0123;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11677704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11677720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0002;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11677790 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11677911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6722;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11677987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11677988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0371;AVGPOST=0.9976;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11678046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11678116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8936;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11678162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5662;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11678192 . T TA 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11678376 . T TCA 348 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6451;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11678435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11678456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0752;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 11678603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9792;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11678611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7711;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11678620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0167;AVGPOST=0.9988;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11678667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11678718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11678846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11678880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6416;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11678904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0112;AVGPOST=0.9983;RSQ=0.9336;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11679004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11679168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.905;LDAF=0.0473;AVGPOST=0.9955;RSQ=0.9704;ERATE=0.0004;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 11679172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0122;AVGPOST=0.9977;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11679219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0122;AVGPOST=0.9977;RSQ=0.9291;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11679220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11679235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11679292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4621;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11679335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0575;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11679490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8540;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11679527 . AAC A 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11679577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11679679 . CA C 625 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11679685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1625;AVGPOST=0.9972;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 11679704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8782;AVGPOST=0.9965;RSQ=0.9870;ERATE=0.0004;THETA=0.0007;AC=1919;AN=2184 GT:DS:GL:BD 0.87866300 1
1 11679846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8779;AVGPOST=0.9963;RSQ=0.9865;ERATE=0.0004;THETA=0.0011;AC=1919;AN=2184 GT:DS:GL:BD 0.87866300 1
1 11679861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7637;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11679938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11679939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11680025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0575;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0002;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11680034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11680049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0571;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0002;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11680123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11680261 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11680373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1200;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 11680430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4432;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11680598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11680610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3991;AVGPOST=0.9956;RSQ=0.9923;ERATE=0.0010;THETA=0.0005;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 11680688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11680738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11680811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8643;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11680817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8633;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11680876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5187;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0009;THETA=0.0006;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 11680901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9202;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11681118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11681139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11681238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11681282 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5102;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11681314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9449;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11681325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0225;AVGPOST=0.9994;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11681842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3527;AVGPOST=0.9916;RSQ=0.9862;ERATE=0.0009;THETA=0.0005;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 11681852 . T TG 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3609;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.4923;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11682122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5194;AVGPOST=0.9944;RSQ=0.9914;ERATE=0.0007;THETA=0.0006;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 11682135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8594;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11682225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11682244 rs71857327 CTTTTT C 14513 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1205;AVGPOST=0.9983;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 11682253 . TC T 875 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8941;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11682302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.3602;AVGPOST=0.9838;RSQ=0.9744;ERATE=0.0019;THETA=0.0003;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 11682482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3091;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11682530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682764 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11682812 . A AG 8333 PASS INDEL;BAVGPOST=0.965;BRSQ=0.936;LDAF=0.4986;AVGPOST=0.9558;RSQ=0.9330;ERATE=0.0099;THETA=0.0007;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 11682833 rs35921750 G GT 58255 PASS INDEL;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5229;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 11682834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11682879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11682894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11683098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8226;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11683233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11683246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5214;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 11683265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11683307 rs113154742 C CT 1138 PASS INDEL;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11683385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.763;LDAF=0.1482;AVGPOST=0.9645;RSQ=0.8998;ERATE=0.0007;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 11683588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3605;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0007;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 11683615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11683708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7022;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11683774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3560;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 11683795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0216;AVGPOST=0.9989;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11683995 rs34812197 T TCCC 95009 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.5081;AVGPOST=0.9732;RSQ=0.9590;ERATE=0.0093;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 11684045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11684114 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4212;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11684310 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11684414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3610;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 11684504 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5913;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11684588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5485;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11684668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11684669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5907;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11684685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11684732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11684879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11684880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0783;AVGPOST=0.9927;RSQ=0.9673;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 11685024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11685116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9400;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11685244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11685403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11685527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11685724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11685808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0899;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 11685832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9353;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11685867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11685882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9291;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11685982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11686144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5961;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686203 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11686369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7705;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11686372 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8467;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11686390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9297;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11686393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9638;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11686426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11686467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7395;AVGPOST=0.9971;RSQ=0.9937;ERATE=0.0004;THETA=0.0008;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 11686588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11686718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9183;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11686816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5777;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11686860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11686921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7412;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11686943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9163;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11686950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11687038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9634;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11687063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8985;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11687068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9992;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11687136 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1703;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 11687233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11687374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11687381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11687652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6441;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 11687674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0170;AVGPOST=0.9987;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11687678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11687718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0592;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 11687991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11688027 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8164;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11688197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0614;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11688351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0805;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 11688405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11688416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11688443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11688449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9311;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11688583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11688620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0617;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11688685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0612;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11688757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8662;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11688784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11688828 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3543;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 11688902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8262;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11689207 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689228 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 11689231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8279;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11689371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5858;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8859;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11689407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11689445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689486 . ATCT A 76 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5634;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11689502 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9455;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11689549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11689609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11689711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11689852 . TGGA T 750 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9668;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11689912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6732;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11689978 . GTC G 150 PASS INDEL;BAVGPOST=0.989;BRSQ=0.653;LDAF=0.0281;AVGPOST=0.9702;RSQ=0.5790;ERATE=0.0107;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11690046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0116;AVGPOST=0.9985;RSQ=0.9466;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11690188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0613;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11690328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8187;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11690430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11690487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11690500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9244;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11690813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7158;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11690825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11690865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6481;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11690911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4672;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11690932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7098;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11690993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11691028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5600;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11691097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0295;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0004;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11691120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9741;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11691124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11691149 . G GT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5897;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11691154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9991;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11691297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6601;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11691367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7407;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11691430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0647;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 11691570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4169;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11691608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11691740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11691791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5149;AVGPOST=0.9962;RSQ=0.9946;ERATE=0.0006;THETA=0.0005;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 11691793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5340;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11691982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8325;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11692243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8537;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11692375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6538;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11692703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11692746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6776;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11692888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2174;AVGPOST=0.9893;RSQ=0.9763;ERATE=0.0009;THETA=0.0004;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 11692975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7012;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11693042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11693216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11693400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11693420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9426;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11693457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11693618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11693822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6100;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11694142 . T TA 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11694254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9105;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11694314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11694392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8192;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11694442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11694480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3417;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0017;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 11694696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11694698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11694972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11694993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1101;AVGPOST=0.9929;RSQ=0.9720;ERATE=0.0024;THETA=0.0005;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 11695001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0066;AVGPOST=0.9980;RSQ=0.8818;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11695182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4710;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11695222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1013;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 11695250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11695255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11695309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4878;AVGPOST=0.9971;RSQ=0.9962;ERATE=0.0005;THETA=0.0033;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 11695409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9573;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11695449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0204;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0003;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11695500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11695531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11695614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8294;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11695656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11695688 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6171;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11695751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11695957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11696018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7530;AVGPOST=0.9972;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 11696031 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6773;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11696040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11696071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11696099 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7512;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11696184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9302;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11696306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7867;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11696348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0084;AVGPOST=0.9979;RSQ=0.8905;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11696579 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9191;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11696780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.8014;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11696781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6580;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11696796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11696809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11696907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6824;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11696938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8334;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11697199 . G GT 23 PASS INDEL;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0138;AVGPOST=0.9828;RSQ=0.5301;ERATE=0.0033;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11697262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9468;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11697303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697344 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5171;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11697553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4995;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697662 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5630;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1258;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 11697702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1259;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 11697771 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8852;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11697788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11697911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8782;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11697919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11697924 . AAAG A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11697945 . CTTTGT C 572 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8632;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11697994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6875;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11698009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1252;AVGPOST=0.9971;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 11698012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7095;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11698022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1254;AVGPOST=0.9968;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 11698030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11698104 . T TG 2420 PASS INDEL;BAVGPOST=0.965;BRSQ=0.796;LDAF=0.0777;AVGPOST=0.9683;RSQ=0.8514;ERATE=0.0004;THETA=0.0010;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 11698246 . TAAA T 4457 PASS INDEL;BAVGPOST=0.965;BRSQ=0.796;LDAF=0.0788;AVGPOST=0.9677;RSQ=0.8507;ERATE=0.0003;THETA=0.0009;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 11698247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.931;LDAF=0.1239;AVGPOST=0.9956;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 11698279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.785;LDAF=0.0273;AVGPOST=0.9891;RSQ=0.8309;ERATE=0.0005;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11698286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1267;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11698324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1265;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11698432 . C CG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5801;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11698433 rs78830137 T TA 10202 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1284;AVGPOST=0.9956;RSQ=0.9845;ERATE=0.0010;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 11698480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11698503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1317;AVGPOST=0.9966;RSQ=0.9888;ERATE=0.0005;THETA=0.0036;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 11698601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6592;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11698770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1266;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11698824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11698842 . AG A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11698909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9444;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11698997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11699117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1267;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11699202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1264;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0009;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11699218 . TA T 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8475;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11699236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11699244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1271;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0021;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11699278 rs79391766 C CA 17454 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1272;AVGPOST=0.9983;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 11699393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4942;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11699422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7326;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11699455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9221;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11699560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11699601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1278;AVGPOST=0.9979;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 11699699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1272;AVGPOST=0.9977;RSQ=0.9914;ERATE=0.0004;THETA=0.0007;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 11699706 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0101;AVGPOST=0.9978;RSQ=0.9139;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11699710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1276;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0003;THETA=0.0014;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 11699731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9967;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 11699775 . C CA 7794 PASS INDEL;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1165;AVGPOST=0.9928;RSQ=0.9753;ERATE=0.0003;THETA=0.0007;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 11699801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1165;AVGPOST=0.9930;RSQ=0.9758;ERATE=0.0003;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 11699803 . TC T 5531 PASS INDEL;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1162;AVGPOST=0.9925;RSQ=0.9736;ERATE=0.0004;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 11699803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1164;AVGPOST=0.9926;RSQ=0.9744;ERATE=0.0003;THETA=0.0007;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 11699804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11699878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9383;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11700033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1268;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0005;THETA=0.0007;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11700125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1268;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0012;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11700203 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11700225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1266;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11700283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1260;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 11700398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11700534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9673;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11700555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11700731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11700892 . TC T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4748;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11700899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1266;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11700934 rs66768019 TAA T 13798 PASS INDEL;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1263;AVGPOST=0.9980;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11700935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1709;AVGPOST=0.9981;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 11701093 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0002;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11701180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9210;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11701191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9990;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11701214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11701222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2332;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 11701236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0002;THETA=0.0053;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11701387 . CAG C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4053;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11701396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11701727 rs35866164 C CT 2917 PASS INDEL;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0500;AVGPOST=0.9968;RSQ=0.9734;ERATE=0.0005;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 11701808 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6605;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11701846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9492;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11701864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11701954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6371;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0005;THETA=0.0014;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 11701996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11702127 . TC T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5868;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11702339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9989;RSQ=0.9831;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11702406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0119;AVGPOST=0.9952;RSQ=0.8477;ERATE=0.0002;THETA=0.0020;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11702480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9050;ERATE=0.0003;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11702481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0395;AVGPOST=0.9986;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11702529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6529;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11702699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11702806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9614;ERATE=0.0003;THETA=0.0053;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11702868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3135;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 11703029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0286;AVGPOST=0.9991;RSQ=0.9871;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11703032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1343;AVGPOST=0.9972;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 11703059 . TG T 6141 PASS INDEL;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1329;AVGPOST=0.9894;RSQ=0.9689;ERATE=0.0007;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 11703087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.967;LDAF=0.2161;AVGPOST=0.9926;RSQ=0.9846;ERATE=0.0005;THETA=0.0005;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 11703089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0393;AVGPOST=0.9978;RSQ=0.9753;ERATE=0.0005;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 11703092 rs112415020 TTTTG T 80365 PASS INDEL;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.7549;AVGPOST=0.9723;RSQ=0.9446;ERATE=0.0070;THETA=0.0015;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 11703166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3088;AVGPOST=0.9940;RSQ=0.9896;ERATE=0.0010;THETA=0.0003;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 11703348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8901;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11703364 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7247;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11703388 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7666;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0005;THETA=0.0002;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 11703463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11703479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8898;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11703494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11703528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8855;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11703689 . G GT 223 PASS INDEL;BAVGPOST=0.989;BRSQ=0.581;LDAF=0.0288;AVGPOST=0.9660;RSQ=0.5332;ERATE=0.0048;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11703725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11703726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4547;AVGPOST=0.9957;RSQ=0.9937;ERATE=0.0011;THETA=0.0004;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 11703754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5799;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11703755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.7685;AVGPOST=0.9951;RSQ=0.9897;ERATE=0.0008;THETA=0.0004;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 11703804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11703827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0123;AVGPOST=0.9956;RSQ=0.8560;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11703983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5084;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11704022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4920;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0461;AVGPOST=0.9958;RSQ=0.9609;ERATE=0.0005;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 11704126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4706;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11704246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6953;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11704256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11704257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0704;AVGPOST=0.9980;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 11704306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11704473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0178;AVGPOST=0.9990;RSQ=0.9772;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11704476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5897;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0696;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 11704765 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0471;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11704902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11704964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11705186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2310;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 11705217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7689;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 11705396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9416;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11705477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7324;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7667;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 11705648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6579;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11705658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11705710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0731;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11705752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6362;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705808 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7707;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 11705851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11705882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11705883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0299;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11705926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3109;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 11705989 . T TA 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.6915;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11706016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11706038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2374;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 11706069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11706225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11706378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9217;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11706384 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5596;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11706497 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11706537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11706634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11706759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2041;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 11707021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4345;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11707042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9987;RSQ=0.9688;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11707056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2022;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 11707096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8815;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11707109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8881;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11707154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.953;LDAF=0.3953;AVGPOST=0.9817;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 11707157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.953;LDAF=0.3957;AVGPOST=0.9810;RSQ=0.9744;ERATE=0.0004;THETA=0.0003;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 11707158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.859;LDAF=0.0234;AVGPOST=0.9943;RSQ=0.9043;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11707204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11707247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3525;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 11707255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9299;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11707444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4344;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0005;THETA=0.0003;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11707590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4346;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11707679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4347;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0005;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11707705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11707725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11707774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4352;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11707781 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11707784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11707808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11707834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7092;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11708025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11708075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11708192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4346;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 11708240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3538;AVGPOST=0.9913;RSQ=0.9862;ERATE=0.0010;THETA=0.0019;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 11708299 . A AT 7376 PASS INDEL;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4335;AVGPOST=0.9401;RSQ=0.9119;ERATE=0.0083;THETA=0.0006;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 11708316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4342;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 11708509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1986;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0005;THETA=0.0002;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 11708628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4336;AVGPOST=0.9945;RSQ=0.9920;ERATE=0.0006;THETA=0.0006;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 11708687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4353;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0007;THETA=0.0006;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 11708760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4354;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0008;THETA=0.0003;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 11708852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7479;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11708868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0152;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11708891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4351;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 11708893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2054;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11708922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6681;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11708923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6620;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11708937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11709021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4344;AVGPOST=0.9886;RSQ=0.9836;ERATE=0.0029;THETA=0.0004;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11709112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11709157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11709212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11709215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.763;LDAF=0.0258;AVGPOST=0.9912;RSQ=0.8581;ERATE=0.0011;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11709316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11709391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4342;AVGPOST=0.9955;RSQ=0.9935;ERATE=0.0006;THETA=0.0004;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11709413 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5663;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11709474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11709524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.4313;AVGPOST=0.9922;RSQ=0.9893;ERATE=0.0005;THETA=0.0003;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 11709563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4306;AVGPOST=0.9914;RSQ=0.9883;ERATE=0.0005;THETA=0.0009;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 11709573 . AC A 14010 PASS INDEL;BAVGPOST=0.979;BRSQ=0.946;LDAF=0.2109;AVGPOST=0.9835;RSQ=0.9674;ERATE=0.0005;THETA=0.0043;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 11709576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4318;AVGPOST=0.9936;RSQ=0.9902;ERATE=0.0007;THETA=0.0004;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 11709608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4332;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0006;THETA=0.0029;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 11709615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9193;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11709628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4311;AVGPOST=0.9914;RSQ=0.9869;ERATE=0.0009;THETA=0.0003;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 11709850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4344;AVGPOST=0.9908;RSQ=0.9865;ERATE=0.0005;THETA=0.0006;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 11709861 . C CT 1078 PASS INDEL;BAVGPOST=0.491;BRSQ=0.106;LDAF=0.4333;AVGPOST=0.6383;RSQ=0.3503;ERATE=0.0318;THETA=0.0005;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 11709889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7193;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11709938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0115;AVGPOST=0.9921;RSQ=0.7366;ERATE=0.0007;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11709989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5041;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11710001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.290;LDAF=0.0114;AVGPOST=0.9855;RSQ=0.5049;ERATE=0.0009;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11710054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.278;LDAF=0.0151;AVGPOST=0.9743;RSQ=0.3860;ERATE=0.0019;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11710195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.241;LDAF=0.0937;AVGPOST=0.8951;RSQ=0.5295;ERATE=0.0039;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 11710221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.865;BRSQ=0.771;LDAF=0.3660;AVGPOST=0.8803;RSQ=0.8263;ERATE=0.0138;THETA=0.0007;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 11710447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.866;LDAF=0.4179;AVGPOST=0.9606;RSQ=0.9427;ERATE=0.0022;THETA=0.0004;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 11710775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1983;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 11710938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0243;AVGPOST=0.9973;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11711036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4346;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 11711060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11711081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5219;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11711139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5838;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11711233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.724;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8942;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11711239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11711271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0101;AVGPOST=0.9966;RSQ=0.8838;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11711322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6286;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0005;THETA=0.0009;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 11711517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0065;AVGPOST=0.9961;RSQ=0.7890;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11711613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11711644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9828;ERATE=0.0004;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11711674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11711764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6505;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11711797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11711816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6616;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11711877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8733;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11711883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11711937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9017;ERATE=0.0005;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11712014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0112;AVGPOST=0.9979;RSQ=0.9290;ERATE=0.0003;THETA=0.0019;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11712045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6245;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0005;THETA=0.0010;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 11712046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5775;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11712131 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11712135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11712273 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0148;AVGPOST=0.9971;RSQ=0.9137;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11712502 . G GTA 844 PASS INDEL;BAVGPOST=0.921;BRSQ=0.487;LDAF=0.1212;AVGPOST=0.8728;RSQ=0.5266;ERATE=0.0116;THETA=0.0028;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 11712520 . TA T 691 PASS INDEL;BAVGPOST=0.958;BRSQ=0.426;LDAF=0.0571;AVGPOST=0.9479;RSQ=0.6461;ERATE=0.0010;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 11712533 . A AT 1140 PASS INDEL;BAVGPOST=0.944;BRSQ=0.680;LDAF=0.0881;AVGPOST=0.9123;RSQ=0.5741;ERATE=0.0055;THETA=0.0010;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11712534 rs67186003 TA T 7804 PASS INDEL;BAVGPOST=0.791;BRSQ=0.553;LDAF=0.3490;AVGPOST=0.7256;RSQ=0.5065;ERATE=0.0588;THETA=0.0004;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 11712535 rs35468744 T TA 2166 PASS INDEL;BAVGPOST=0.795;BRSQ=0.323;LDAF=0.1819;AVGPOST=0.8161;RSQ=0.5173;ERATE=0.0115;THETA=0.0009;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11712537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8019;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11712589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.7391;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11712710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4762;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11712712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9654;ERATE=0.0005;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11712720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0034;AVGPOST=0.9956;RSQ=0.5556;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11712725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8138;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11712759 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5334;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11712765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11712858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9438;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11713006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8352;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11713070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11713393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9951;RSQ=0.5664;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11713400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4521;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11713535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4370;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 11713657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6814;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11713685 . TTGAG T 1451 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9528;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11713802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4499;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11713865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9166;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11713946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9984;RSQ=0.9612;ERATE=0.0005;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11714020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6251;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0006;THETA=0.0009;AC=1366;AN=2184 GT:DS:GL:BD 0.62545788 1
1 11714221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0597;AVGPOST=0.9986;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 11714334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8140;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11714336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9985;RSQ=0.9772;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11714407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6796;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11714500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5168;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11714531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9217;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11714640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6536;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11714694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8578;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11714709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0113;AVGPOST=0.9972;RSQ=0.8974;ERATE=0.0008;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11714759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4391;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11714939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6165;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 11715120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9984;RSQ=0.9849;ERATE=0.0002;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11715171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6610;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11715293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.5210;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11715396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7153;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11715408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9709;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11715463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11715792 . TCTAA T 1708 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0145;AVGPOST=0.9952;RSQ=0.8810;ERATE=0.0007;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11715894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6259;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0007;THETA=0.0005;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 11715978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.1335;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11715982 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0593;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0003;THETA=0.0016;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 11716137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7923;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11716208 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6612;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11716310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11716403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11716421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8366;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11716516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9974;RSQ=0.9097;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11716535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8325;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11716566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11716570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5461;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11716654 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6886;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11716731 . C CA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11716758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11716871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9585;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11716907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7594;ERATE=0.0005;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11717059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5833;AVGPOST=0.9955;RSQ=0.9923;ERATE=0.0006;THETA=0.0006;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 11717085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7796;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11717086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6824;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11717088 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.9667;AVGPOST=0.9952;RSQ=0.9422;ERATE=0.0004;THETA=0.0003;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 11717144 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6312;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11717247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11717270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5690;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6292;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11717338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11717361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4900;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7576;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0197;AVGPOST=0.9988;RSQ=0.9737;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11717745 . TA T 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4771;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5954;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11717888 . TA T 199 PASS INDEL;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0084;AVGPOST=0.9964;RSQ=0.8293;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11717979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11717980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.6055;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11718042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8611;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11718203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3560;AVGPOST=0.9955;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 11718251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11718379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7315;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11718457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11718508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4159;AVGPOST=0.9913;RSQ=0.9861;ERATE=0.0012;THETA=0.0003;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 11718572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0084;AVGPOST=0.9955;RSQ=0.8032;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11718607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11718659 . ATTAAT A 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3553;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11718750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7169;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11718771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8570;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11718851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11718964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11719034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2058;AVGPOST=0.9960;RSQ=0.9905;ERATE=0.0003;THETA=0.0012;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 11719084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8882;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11719208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3981;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11719286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5837;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11719383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9393;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11719401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9338;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11719508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0205;AVGPOST=0.9970;RSQ=0.9420;ERATE=0.0004;THETA=0.0001;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11719611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8124;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11719793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4300;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11719855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9984;RSQ=0.9645;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11719881 . A AT 99 PASS INDEL;BAVGPOST=0.972;BRSQ=0.465;LDAF=0.0525;AVGPOST=0.9354;RSQ=0.4682;ERATE=0.0149;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11719889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.5381;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11720035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5841;AVGPOST=0.9955;RSQ=0.9921;ERATE=0.0007;THETA=0.0003;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 11720223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9622;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11720261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0106;AVGPOST=0.9957;RSQ=0.8634;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11720346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.721;LDAF=0.0070;AVGPOST=0.9949;RSQ=0.7157;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11720392 . TAAGA T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11720467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6848;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11720497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.6729;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11720530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5471;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11720940 . C CA 510 PASS INDEL;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0061;AVGPOST=0.9966;RSQ=0.7659;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11721061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7368;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11721117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1165;AVGPOST=0.9936;RSQ=0.9749;ERATE=0.0005;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 11721208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4780;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11721309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6162;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11721317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11721335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7630;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0003;THETA=0.0001;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 11721339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11721367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3468;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 11721454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9229;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11721504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6632;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11721596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3472;AVGPOST=0.9957;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 11721618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11721690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11721997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7602;AVGPOST=0.9958;RSQ=0.9913;ERATE=0.0011;THETA=0.0009;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 11722213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0201;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11722267 . GA G 6152 PASS INDEL;BAVGPOST=0.953;BRSQ=0.877;LDAF=0.2330;AVGPOST=0.9629;RSQ=0.9274;ERATE=0.0021;THETA=0.0025;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 11722506 rs79739032 AG A 36699 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2541;AVGPOST=0.9908;RSQ=0.9811;ERATE=0.0006;THETA=0.0004;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 11722507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.7001;AVGPOST=0.9916;RSQ=0.9837;ERATE=0.0005;THETA=0.0005;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 11722684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11722711 . TG T 358 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11722719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11722743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.753;LDAF=0.0199;AVGPOST=0.9920;RSQ=0.8496;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11722883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9010;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11722886 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11723175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11723178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0978;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 11723399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9252;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11723486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11723598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11723727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7168;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11723729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8456;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11723807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5132;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11723830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6826;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11723831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0122;AVGPOST=0.9981;RSQ=0.9426;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11723873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11723906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9784;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11723963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8841;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11724083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0044;AVGPOST=0.9972;RSQ=0.7227;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11724102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9441;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11724139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11724175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11724190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11724256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11724350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11724451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11724472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11724662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6493;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11724698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11724879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6649;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11725035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5447;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11725045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11725055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5506;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11725149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11725200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8360;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11725266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8942;ERATE=0.0002;THETA=0.0061;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11725301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11725314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2318;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0003;THETA=0.0010;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 11725437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9712;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11725469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8816;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11725598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8753;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11725638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11725691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7870;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11725819 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9711;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11725833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11725937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.414;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5269;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11725961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8596;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11725962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9982;RSQ=0.8798;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11726046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9574;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11726118 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9968;RSQ=0.9357;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11726209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0998;AVGPOST=0.9963;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 11726248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9413;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11726380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0508;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 11726443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0004;THETA=0.0007;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11726510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1262;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0004;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11726521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11726543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1340;AVGPOST=0.9945;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 11726554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1255;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11726625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1259;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11726705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11726745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1257;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 11726770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9334;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11726857 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11726943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1239;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 11726970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8357;ERATE=0.0009;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11727068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9672;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11727081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9161;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11727185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9511;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11727186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11727329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11727386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11727452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8126;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11727481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1037;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 11727507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9062;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11727536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11727663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9472;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11727796 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11727813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7651;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11727916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4608;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11727921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11728066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9529;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11728078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11728160 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11728286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11728290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6913;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11728321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11728399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5341;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11728439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11728755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11728875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11728946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11728979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11729037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11729130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11729162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11729174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0373;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11729191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11729197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11729232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11729242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4491;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11729263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3588;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 11729264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11729309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0529;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 11729312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1939;AVGPOST=0.9967;RSQ=0.9915;ERATE=0.0006;THETA=0.0009;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 11729344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9306;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11729478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0398;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11729634 . CAATGTCCCTG C 1537 PASS INDEL;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7990;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11729677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11729777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11729778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11729787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8057;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11729900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0127;AVGPOST=0.9966;RSQ=0.8878;ERATE=0.0011;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11729914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11729976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11730028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11730077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11730121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11730131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11730132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11730197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0128;AVGPOST=0.9993;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11730239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11730260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9216;ERATE=0.0009;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11730279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1566;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 11730307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11730380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5529;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11730896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11730935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11731058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0397;AVGPOST=0.9975;RSQ=0.9765;ERATE=0.0004;THETA=0.0011;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11731115 . AT A 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6028;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11731143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0127;AVGPOST=0.9988;RSQ=0.9624;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11731266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9657;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11731298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5757;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0006;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 11731341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11731350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11731364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6652;ERATE=0.0013;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11731369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11731449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11731490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11731494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11731538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11731649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5569;AVGPOST=0.9975;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1218;AN=2184 GT:DS:GL:BD 0.55769229 1
1 11731727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1497;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 11731774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11731784 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0093;AVGPOST=0.9938;RSQ=0.7413;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11731927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9982;RSQ=0.9604;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11731928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5756;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 11732011 . GGTT G 2133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9993;RSQ=0.9823;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11732156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6295;ERATE=0.0006;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11732191 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5253;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11732314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6377;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11732327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5327;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11732347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.764;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.7944;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11732414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8822;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11732442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11732494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11732519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.862;LDAF=0.0229;AVGPOST=0.9893;RSQ=0.8139;ERATE=0.0007;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11732543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11732652 . CGTAA C 218 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7125;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11732735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6381;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11732765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11732790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11732848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0863;AVGPOST=0.9988;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 11732878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5205;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11732886 . C CT 177 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7841;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11732891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6901;ERATE=0.0006;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11732924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11732951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0141;AVGPOST=0.9982;RSQ=0.9441;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11732960 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.7941;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11733004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7654;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11733052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7908;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11733053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5492;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 11733147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5494;AVGPOST=0.9976;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 11733215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9675;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11733344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11733399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9209;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11733406 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11733514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3042;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11733664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9027;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11733666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5497;AVGPOST=0.9974;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 11733745 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0096;AVGPOST=0.9984;RSQ=0.9285;ERATE=0.0003;THETA=0.0022;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11733847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0074;AVGPOST=0.9977;RSQ=0.8789;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11733866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4826;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11733948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11734021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8953;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11734063 . AT A 404 PASS INDEL;BAVGPOST=0.973;BRSQ=0.497;LDAF=0.0427;AVGPOST=0.9483;RSQ=0.4973;ERATE=0.0124;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11734082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11734146 . CT C 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11734152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5507;AVGPOST=0.9964;RSQ=0.9947;ERATE=0.0007;THETA=0.0006;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 11734206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734250 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0862;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 11734482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5683;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0009;THETA=0.0007;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 11734535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0137;AVGPOST=0.9968;RSQ=0.9002;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11734603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11734636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8853;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11734641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4279;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 11734718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5691;AVGPOST=0.9972;RSQ=0.9965;ERATE=0.0004;THETA=0.0036;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 11734812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11734935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0859;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0005;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 11734943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6410;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11734970 . G GT 918 PASS INDEL;BAVGPOST=0.776;BRSQ=0.239;LDAF=0.2011;AVGPOST=0.7745;RSQ=0.4531;ERATE=0.0163;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 11734979 . TTG T 31963 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.6553;AVGPOST=0.9861;RSQ=0.9781;ERATE=0.0028;THETA=0.0004;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 11734984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6540;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0006;THETA=0.0005;AC=1431;AN=2184 GT:DS:GL:BD 0.65521979 1
1 11735058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5500;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 11735068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11735077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11735192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11735216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9306;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11735318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11735361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11735422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0066;AVGPOST=0.9944;RSQ=0.6699;ERATE=0.0014;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11735425 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11735548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.735;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11735574 . G GT 1083 PASS INDEL;BAVGPOST=0.953;BRSQ=0.586;LDAF=0.0863;AVGPOST=0.9042;RSQ=0.5130;ERATE=0.0242;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 11735615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5685;AVGPOST=0.9960;RSQ=0.9936;ERATE=0.0011;THETA=0.0006;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 11735634 . TC T 9718 PASS INDEL;BAVGPOST=0.939;BRSQ=0.901;LDAF=0.4894;AVGPOST=0.9009;RSQ=0.8714;ERATE=0.0109;THETA=0.0007;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 11735746 rs79606943 CT C 51457 PASS INDEL;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5451;AVGPOST=0.9929;RSQ=0.9898;ERATE=0.0005;THETA=0.0011;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 11735748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11735770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0851;AVGPOST=0.9981;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 11735794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7741;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11735795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9223;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11735796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7084;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11735897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6289;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11735901 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5496;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0006;THETA=0.0005;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 11735981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0198;AVGPOST=0.9924;RSQ=0.8366;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11736017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5689;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 11736037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11736095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9418;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11736148 . CCATTAT C 2814 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11736243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11736264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11736424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11736484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11736540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11736558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11736560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.953;LDAF=0.9188;AVGPOST=0.9897;RSQ=0.9493;ERATE=0.0004;THETA=0.0004;AC=2008;AN=2184 GT:DS:GL:BD 0.91941392 1
1 11736571 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2280;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 11736601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7027;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11736695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0943;AVGPOST=0.9974;RSQ=0.9893;ERATE=0.0003;THETA=0.0014;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 11736717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11736721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7313;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11736754 . A AT 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8024;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11736897 . TTTTTA T 841 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0082;AVGPOST=0.9960;RSQ=0.7890;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11736946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0387;AVGPOST=0.9989;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11737069 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8864;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11737159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11737309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8392;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11737334 . GAAGT G 2111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0144;AVGPOST=0.9981;RSQ=0.9447;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11737557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11737602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11737843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1655;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 11738045 . GT G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11738070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11738357 . TAGGCTATC T 287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6541;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11738425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9453;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11738438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11738617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7028;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11738657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11738709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8221;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11738757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11738763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11738797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11738801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11738881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11738901 . TC T 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11738926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6811;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 11738966 . TA T 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8930;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11739048 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11739155 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8707;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11739292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7426;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11739331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11739360 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6675;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 11739386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11739395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0002;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11739396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9453;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11739413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0387;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11739518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5368;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11739618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11739638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6474;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11739683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7968;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11739787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739896 . TTA T 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4928;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11739898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1708;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 11739958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11740002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11740006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5538;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11740096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11740280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11740356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6715;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11740357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11740434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11740467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6614;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11740509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6634;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11740567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9337;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11740831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11740882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11740900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11740939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6667;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 11740960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1662;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 11741112 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4395;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11741182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11741241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11741253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9613;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11741309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.814;LDAF=0.0810;AVGPOST=0.9661;RSQ=0.8267;ERATE=0.0012;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 11741368 . T TC 172 PASS INDEL;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0054;AVGPOST=0.9948;RSQ=0.6129;ERATE=0.0011;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11741368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0114;AVGPOST=0.9972;RSQ=0.9061;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11741415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.4419;AVGPOST=0.9835;RSQ=0.9737;ERATE=0.0022;THETA=0.0004;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 11741434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7242;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11741466 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6775;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11741697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6125;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11741731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9183;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11741811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.824;LDAF=0.0223;AVGPOST=0.9905;RSQ=0.8264;ERATE=0.0009;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11741883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3951;AVGPOST=0.9967;RSQ=0.9941;ERATE=0.0006;THETA=0.0002;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 11741894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11741970 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5936;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11741974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1298;AVGPOST=0.9977;RSQ=0.9918;ERATE=0.0003;THETA=0.0007;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 11742014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9400;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11742024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4568;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11742192 . A AT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4369;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8735;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11742333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0361;AVGPOST=0.9984;RSQ=0.9796;ERATE=0.0005;THETA=0.0001;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11742340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7667;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11742376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1324;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0006;THETA=0.0008;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 11742419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8368;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11742519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.6053;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11742572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742623 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0551;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 11742704 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11742800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5710;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11742878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11742976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7437;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743004 . CTG C 286 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6175;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11743043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11743187 . TA T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11743274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8974;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11743426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4554;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11743480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11743508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6616;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9621;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11743624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6945;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11743852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11743995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7272;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11744269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11744437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11744443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4120;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11744509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11744634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8294;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11744635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4692;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 11744777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11744791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6511;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11744879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0140;AVGPOST=0.9978;RSQ=0.9303;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11744906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0612;AVGPOST=0.9985;RSQ=0.9914;ERATE=0.0003;THETA=0.0008;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11744957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8147;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11745067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4663;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11745216 . A AG 327 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8157;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11745266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1074;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 11745272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11745347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0404;AVGPOST=0.9979;RSQ=0.9792;ERATE=0.0005;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11745614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11745931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11745987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7679;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11746004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4575;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 11746046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8728;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11746130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0204;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11746212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11746225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.908;LDAF=0.4060;AVGPOST=0.9408;RSQ=0.9308;ERATE=0.0033;THETA=0.0018;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 11746361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5079;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11746429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.985;LDAF=0.4267;AVGPOST=0.9739;RSQ=0.9674;ERATE=0.0019;THETA=0.0017;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 11746501 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.508;LDAF=0.0107;AVGPOST=0.9872;RSQ=0.5287;ERATE=0.0007;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11746544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.482;LDAF=0.0064;AVGPOST=0.9955;RSQ=0.7265;ERATE=0.0009;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11746597 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.986;LDAF=0.4718;AVGPOST=0.9821;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 11746713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0056;AVGPOST=0.9925;RSQ=0.4509;ERATE=0.0010;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11746823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.982;LDAF=0.4674;AVGPOST=0.9809;RSQ=0.9753;ERATE=0.0010;THETA=0.0010;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 11746880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4396;ERATE=0.0006;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11747003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7007;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11747044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.987;LDAF=0.4479;AVGPOST=0.9829;RSQ=0.9777;ERATE=0.0006;THETA=0.0011;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 11747047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5661;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11747085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.700;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8734;ERATE=0.0005;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11747098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11747119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.819;LDAF=0.0162;AVGPOST=0.9947;RSQ=0.9128;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11747219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.922;LDAF=0.0258;AVGPOST=0.9920;RSQ=0.9205;ERATE=0.0006;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11747261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5941;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11747372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4313;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11747404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6846;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11747519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5708;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11747576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.663;LDAF=0.0080;AVGPOST=0.9951;RSQ=0.7497;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11747588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.937;LDAF=0.0332;AVGPOST=0.9956;RSQ=0.9672;ERATE=0.0004;THETA=0.0011;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 11747640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.810;LDAF=0.0098;AVGPOST=0.9937;RSQ=0.8185;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11747758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0230;AVGPOST=0.9961;RSQ=0.9495;ERATE=0.0005;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11747837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.396;LDAF=0.9896;AVGPOST=0.9883;RSQ=0.5626;ERATE=0.0008;THETA=0.0011;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 11747857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8481;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11747914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.936;LDAF=0.0209;AVGPOST=0.9942;RSQ=0.9246;ERATE=0.0005;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11747915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6552;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11747967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4732;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11747979 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6509;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11748281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.972;LDAF=0.4674;AVGPOST=0.9751;RSQ=0.9691;ERATE=0.0006;THETA=0.0014;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 11748301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11748349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6108;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11748353 . TTATA T 371 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8802;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11748405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0235;AVGPOST=0.9987;RSQ=0.9874;ERATE=0.0003;THETA=0.0011;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11748408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11748416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0197;AVGPOST=0.9977;RSQ=0.9617;ERATE=0.0005;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11748424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4275;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11748468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11748487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11748504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11748518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11748519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.1178;AVGPOST=0.9894;RSQ=0.9704;ERATE=0.0004;THETA=0.0011;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 11748559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.942;LDAF=0.0250;AVGPOST=0.9936;RSQ=0.9353;ERATE=0.0004;THETA=0.0059;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11748614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8679;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11748681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0271;AVGPOST=0.9977;RSQ=0.9806;ERATE=0.0003;THETA=0.0015;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11748716 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0272;AVGPOST=0.9975;RSQ=0.9780;ERATE=0.0003;THETA=0.0024;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11748717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.8113;ERATE=0.0003;THETA=0.0049;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11748791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9402;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11748803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.942;LDAF=0.0236;AVGPOST=0.9951;RSQ=0.9485;ERATE=0.0003;THETA=0.0015;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11748819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.521;LDAF=0.0271;AVGPOST=0.9739;RSQ=0.6266;ERATE=0.0023;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11748891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.894;LDAF=0.4380;AVGPOST=0.8984;RSQ=0.8779;ERATE=0.0050;THETA=0.0005;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 11748941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.892;LDAF=0.4125;AVGPOST=0.8970;RSQ=0.8787;ERATE=0.0036;THETA=0.0012;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 11748971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.881;LDAF=0.4023;AVGPOST=0.9266;RSQ=0.9144;ERATE=0.0022;THETA=0.0007;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 11748988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.402;LDAF=0.0092;AVGPOST=0.9887;RSQ=0.4879;ERATE=0.0014;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11749084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.455;LDAF=0.0120;AVGPOST=0.9819;RSQ=0.4361;ERATE=0.0012;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11749102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.917;LDAF=0.0245;AVGPOST=0.9936;RSQ=0.9301;ERATE=0.0005;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11749134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.893;LDAF=0.0118;AVGPOST=0.9971;RSQ=0.9265;ERATE=0.0005;THETA=0.0031;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11749147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3870;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11749281 . ATG A 67 PASS INDEL;BAVGPOST=0.987;BRSQ=0.424;LDAF=0.0214;AVGPOST=0.9742;RSQ=0.5006;ERATE=0.0015;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11749329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0094;AVGPOST=0.9900;RSQ=0.5818;ERATE=0.0010;THETA=0.0034;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11749452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8705;ERATE=0.0005;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11749472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.3854;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11749510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4698;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11749521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11749556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11749639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.8225;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11749661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0075;AVGPOST=0.9967;RSQ=0.8814;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11749670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11749671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0086;AVGPOST=0.9981;RSQ=0.9424;ERATE=0.0004;THETA=0.0025;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11749726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.629;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.6178;ERATE=0.0006;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11749757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.981;LDAF=0.4991;AVGPOST=0.9738;RSQ=0.9677;ERATE=0.0013;THETA=0.0022;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 11749910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11749914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.987;LDAF=0.4252;AVGPOST=0.9753;RSQ=0.9697;ERATE=0.0014;THETA=0.0008;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 11749946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.4243;AVGPOST=0.9811;RSQ=0.9779;ERATE=0.0009;THETA=0.0020;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 11750058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.982;LDAF=0.4688;AVGPOST=0.9783;RSQ=0.9749;ERATE=0.0005;THETA=0.0015;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 11750189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3540;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11750292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.837;LDAF=0.0134;AVGPOST=0.9935;RSQ=0.8670;ERATE=0.0004;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11750327 . CATT C 519 PASS INDEL;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0084;AVGPOST=0.9903;RSQ=0.5406;ERATE=0.0011;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11750333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11750461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.980;LDAF=0.5027;AVGPOST=0.9767;RSQ=0.9712;ERATE=0.0005;THETA=0.0011;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 11750480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11750516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7189;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11750549 . T TA 1064 PASS INDEL;BAVGPOST=0.992;BRSQ=0.911;LDAF=0.0242;AVGPOST=0.9914;RSQ=0.8945;ERATE=0.0010;THETA=0.0059;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11750602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.709;LDAF=0.0194;AVGPOST=0.9885;RSQ=0.7748;ERATE=0.0006;THETA=0.0015;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11750682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.713;LDAF=0.0183;AVGPOST=0.9885;RSQ=0.7629;ERATE=0.0006;THETA=0.0030;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11750687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4349;ERATE=0.0007;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11750711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6250;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11750723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.868;LDAF=0.0233;AVGPOST=0.9946;RSQ=0.9351;ERATE=0.0007;THETA=0.0023;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11750750 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.652;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.9233;ERATE=0.0004;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11750768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.931;LDAF=0.4783;AVGPOST=0.9409;RSQ=0.9286;ERATE=0.0062;THETA=0.0014;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 11750785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.694;LDAF=0.0559;AVGPOST=0.9511;RSQ=0.6769;ERATE=0.0081;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11750792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0051;AVGPOST=0.9926;RSQ=0.4205;ERATE=0.0010;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11750820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0087;AVGPOST=0.9980;RSQ=0.9390;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11750857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0031;AVGPOST=0.9954;RSQ=0.4251;ERATE=0.0006;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11751355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11751405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8803;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11751453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5647;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11751518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11751533 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11751679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6343;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11751732 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11751751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6702;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11752004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11752063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9403;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11752220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11752251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0035;AVGPOST=0.9959;RSQ=0.5628;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11752315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11752407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8366;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11752561 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11752612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11752625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0269;AVGPOST=0.9987;RSQ=0.9823;ERATE=0.0004;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11752638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8705;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11752726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11752739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0002;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11752743 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11752786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9386;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11753381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11753413 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11753555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11753636 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11753640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8859;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11753699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4126;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0008;THETA=0.0006;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 11753708 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6455;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11753725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0002;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11753811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11753839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11753864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3979;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 11753985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9699;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11754077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7577;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11754180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8842;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11754232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11754304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.912;LDAF=0.0275;AVGPOST=0.9952;RSQ=0.9305;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11754333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9111;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11754410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11754480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11754721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11754730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2732;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 11754801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11754823 . ATG A 2674 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9987;RSQ=0.9775;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11754871 rs58134172 GTT G 127 PASS INDEL;BAVGPOST=0.964;BRSQ=0.449;LDAF=0.0363;AVGPOST=0.9665;RSQ=0.6444;ERATE=0.0016;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11754877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.7036;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11755065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11755066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0196;AVGPOST=0.9981;RSQ=0.9663;ERATE=0.0005;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11755137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8263;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11755236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11755284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0232;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0002;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11755312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0309;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0002;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11755343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0105;AVGPOST=0.9971;RSQ=0.9032;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11755391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6697;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11755484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11755582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11755634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11755688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8106;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11755743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7591;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11755770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0064;AVGPOST=0.9976;RSQ=0.8734;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11755881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11755984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0112;AVGPOST=0.9963;RSQ=0.8815;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11756010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11756013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11756095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11756155 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11756173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11756235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11756304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9228;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11756329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11756347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11756372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11756526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11756548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5229;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11756588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9324;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11756625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11756632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11756667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9216;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11756762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11756993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8610;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11757038 . CAT C 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11757185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7018;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11757228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11757285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6252;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11757306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2679;AVGPOST=0.9894;RSQ=0.9804;ERATE=0.0028;THETA=0.0003;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 11757343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11757383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11757455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11757586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.8928;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11757771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0168;AVGPOST=0.9979;RSQ=0.9549;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11757786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0252;AVGPOST=0.9979;RSQ=0.9698;ERATE=0.0004;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11757864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7957;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11757865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11757907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11758011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6371;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11758100 . CTTAGT C 1014 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11758126 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0002;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11758131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9334;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11758190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5633;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11758226 . GA G 1472 PASS INDEL;BAVGPOST=0.993;BRSQ=0.768;LDAF=0.0121;AVGPOST=0.9958;RSQ=0.8455;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11758355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11758370 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11758400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11758495 . TA T 16421 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1218;AVGPOST=0.9972;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 11758605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8227;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11758645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5405;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11758673 rs113259088 A AT 4772 PASS INDEL;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0322;AVGPOST=0.9977;RSQ=0.9713;ERATE=0.0004;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 11759019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11759059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8759;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11759236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9099;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11759251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9769;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11759279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11759414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0002;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11759517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6275;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11759641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9313;ERATE=0.0004;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11759662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11759684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5524;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11759711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11759884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5312;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11759999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9292;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11760192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.918;LDAF=0.0439;AVGPOST=0.9942;RSQ=0.9477;ERATE=0.0004;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11760221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0343;AVGPOST=0.9990;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11760352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11760430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5926;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2357;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 11760448 . T TG 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7896;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11760468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.921;LDAF=0.7811;AVGPOST=0.9411;RSQ=0.8699;ERATE=0.0147;THETA=0.0004;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 11760508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7215;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11760688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1372;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 11760693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11760750 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5377;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0003;THETA=0.0019;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 11760897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5372;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 11760910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11760927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0085;AVGPOST=0.9980;RSQ=0.9069;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11760957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9706;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11760997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9217;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11761078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0047;AVGPOST=0.9953;RSQ=0.6375;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11761096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0097;AVGPOST=0.9987;RSQ=0.9392;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11761388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1406;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 11761575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11761589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.5827;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11761624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8274;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11761705 . AAAGG A 1613 PASS INDEL;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0176;AVGPOST=0.9930;RSQ=0.8509;ERATE=0.0013;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11761911 . GAA G 478 PASS INDEL;BAVGPOST=0.976;BRSQ=0.804;LDAF=0.0770;AVGPOST=0.9914;RSQ=0.9511;ERATE=0.0006;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 11761967 rs113064406 AAG A 6723 PASS INDEL;BAVGPOST=0.991;BRSQ=0.938;LDAF=0.0803;AVGPOST=0.9954;RSQ=0.9739;ERATE=0.0005;THETA=0.0009;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 11761969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11762056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4050;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11762090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11762194 rs72332268 AAG A 44 PASS INDEL;BAVGPOST=0.971;BRSQ=0.382;LDAF=0.0328;AVGPOST=0.9563;RSQ=0.4759;ERATE=0.0063;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11762266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4596;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11762319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0032;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11762452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11762500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1419;AVGPOST=0.9952;RSQ=0.9854;ERATE=0.0006;THETA=0.0004;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 11762565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9989;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11762667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11762777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11762870 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3105;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 11762980 . GC G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11762998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8527;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11763082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9582;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11763149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1604;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 11763312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1604;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 11763404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11763499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11763610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6720;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11763635 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8677;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11763921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0989;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0015;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 11763955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8643;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11764034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6814;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11764053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0120;AVGPOST=0.9966;RSQ=0.8762;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11764211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7553;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11764257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11764464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11764496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4021;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11764694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8553;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11764714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11764726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7439;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11764825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9813;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11764917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11764928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0342;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11764932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.2562;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11764992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11765056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11765098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0512;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 11765129 rs11375408 C CT 2024 PASS INDEL;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0285;AVGPOST=0.9930;RSQ=0.9052;ERATE=0.0014;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11765142 . TC T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11765245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3939;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11765273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4801;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11765308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.4228;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11765528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0090;AVGPOST=0.9990;RSQ=0.9524;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11765601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0832;AVGPOST=0.9982;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 11765641 . G GA 423 PASS INDEL;BAVGPOST=0.958;BRSQ=0.570;LDAF=0.0824;AVGPOST=0.9116;RSQ=0.5152;ERATE=0.0243;THETA=0.0007;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 11765652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8062;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11765744 . CT C 330 PASS INDEL;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.6996;ERATE=0.0009;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11765756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7779;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11765810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11765901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11765921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6618;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11765958 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5448;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11766090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5081;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11766131 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6866;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11766341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6443;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11766559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11766725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0521;AVGPOST=0.9980;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 11766765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5497;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 11766806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11767067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11767089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11767097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11767118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11767129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11767144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11767149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11767155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11767188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7523;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 11767210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11767232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11767259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9998;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11767262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9189;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9284;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11767517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6358;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11767574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11767594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.859;LDAF=0.0098;AVGPOST=0.9977;RSQ=0.8962;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11767605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.9079;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11767798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3460;AVGPOST=0.9970;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 11767935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1933;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 11767987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3448;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0008;THETA=0.0031;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 11767988 . ACTC A 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11768003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7057;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11768022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6761;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11768072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11768191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11768203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11768209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 11768487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11768520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11768626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11768667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11768739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11768744 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7203;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 11768841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8217;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1796;AN=2184 GT:DS:GL:BD 0.82234430 1
1 11768850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11768917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8731;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11768984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9544;ERATE=0.0004;THETA=0.0044;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11769006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11769018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9818;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11769020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11769036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11769110 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8611;ERATE=0.0004;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11769170 . AC A 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11769251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11769401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0004;THETA=0.0054;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11769409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2089;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 11769524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6240;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 11769537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11769540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9517;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11769541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1732;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0004;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 11769573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11769582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11769595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1376;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 11769597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11769728 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11769884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11769986 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8676;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11770149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7364;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11770199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2093;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 11770236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11770311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11770348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3919;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0005;THETA=0.0014;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 11770350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1730;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 11770403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11770435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11770439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0423;AVGPOST=0.9986;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 11770478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0043;AVGPOST=0.9942;RSQ=0.4242;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11770624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.812;LDAF=0.2560;AVGPOST=0.8587;RSQ=0.7156;ERATE=0.0605;THETA=0.0005;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 11770723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2093;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0005;THETA=0.0008;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 11770727 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1718;AVGPOST=0.9971;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 11770747 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6924;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11770861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.7071;ERATE=0.0017;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11770914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11770958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1368;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 11771075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9492;AVGPOST=0.9978;RSQ=0.9813;ERATE=0.0004;THETA=0.0004;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 11771144 rs35168149 CTG C 49662 PASS INDEL;BAVGPOST=0.971;BRSQ=0.948;LDAF=0.5778;AVGPOST=0.9352;RSQ=0.9020;ERATE=0.0221;THETA=0.0003;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 11771169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8257;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11771182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11771188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11771351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11771370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11771380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11771381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9270;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11771529 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8161;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11771602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9482;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11771659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9998;RSQ=0.9577;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11771794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11771980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11772028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11772106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11772111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11772141 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11772194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11772197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0014;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11772221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11772313 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0608;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 11772314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11772321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11772942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11773022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0168;AVGPOST=0.9979;RSQ=0.9466;ERATE=0.0007;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11773154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7426;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11773384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0071;AVGPOST=0.9964;RSQ=0.7966;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11773445 . TTTTTC T 348 PASS INDEL;BAVGPOST=0.997;BRSQ=0.688;LDAF=0.0064;AVGPOST=0.9957;RSQ=0.7367;ERATE=0.0010;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11773669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11773683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0099;AVGPOST=0.9966;RSQ=0.8390;ERATE=0.0008;THETA=0.0019;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11773767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0673;AVGPOST=0.9889;RSQ=0.9327;ERATE=0.0013;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 11773804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.839;LDAF=0.0256;AVGPOST=0.9857;RSQ=0.7941;ERATE=0.0009;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11773846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.334;LDAF=0.0060;AVGPOST=0.9918;RSQ=0.4465;ERATE=0.0010;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11773962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4357;ERATE=0.0011;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11774176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4506;AVGPOST=0.9958;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 11774186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0109;AVGPOST=0.9968;RSQ=0.8779;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11774299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4237;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 11774495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11774504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11774589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9693;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11774694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11774946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11774995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11775011 . CT C 1910 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0132;AVGPOST=0.9990;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11775033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11775176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11775253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11775260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11775314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0763;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 11775325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8383;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11775446 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0435;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 11775825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8969;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11775827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11775832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.6176;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11776126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5615;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11776393 . G GA 612 PASS INDEL;BAVGPOST=0.938;BRSQ=0.507;LDAF=0.1079;AVGPOST=0.8773;RSQ=0.4634;ERATE=0.0336;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11776401 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11776431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0168;AVGPOST=0.9976;RSQ=0.9401;ERATE=0.0006;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11776511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0030;AVGPOST=0.9952;RSQ=0.3691;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11776623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11776830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11777002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11777109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9078;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11777130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11777221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11777230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5510;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11777239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11777269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7729;ERATE=0.0015;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11777365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9565;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11777440 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11777457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7842;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11777475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9569;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11777482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.688;LDAF=0.0109;AVGPOST=0.9953;RSQ=0.8425;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11777558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11777732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11777825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1142;AVGPOST=0.9987;RSQ=0.9946;ERATE=0.0004;THETA=0.0010;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 11777888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1145;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0003;THETA=0.0064;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 11777900 . T TAACC 27907 PASS INDEL;BAVGPOST=0.989;BRSQ=0.949;LDAF=0.1045;AVGPOST=0.9871;RSQ=0.9540;ERATE=0.0005;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 11777985 rs34303490 A AAC 7988 PASS INDEL;BAVGPOST=0.991;BRSQ=0.953;LDAF=0.0996;AVGPOST=0.9880;RSQ=0.9534;ERATE=0.0006;THETA=0.0005;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 11777990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8739;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 11778077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.6213;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11778190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8520;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11778246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11778280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8740;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 11778298 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11778369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11778641 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8743;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 11778680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0198;AVGPOST=0.9991;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11778708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11778730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11778745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11778755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8621;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11778859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8457;ERATE=0.0003;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11778890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.960;LDAF=0.7180;AVGPOST=0.9811;RSQ=0.9671;ERATE=0.0006;THETA=0.0025;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 11778970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0004;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11778987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8602;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11779006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11779034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2857;AVGPOST=0.9898;RSQ=0.9826;ERATE=0.0005;THETA=0.0004;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 11779087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.2998;ERATE=0.0003;THETA=0.0023;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11779101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0110;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11779218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11779351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11779390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11779446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9130;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11779478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9501;ERATE=0.0003;THETA=0.0036;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11779498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11779504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11779536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7235;ERATE=0.0013;THETA=0.0108;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11779568 . GA G 697 PASS INDEL;BAVGPOST=0.984;BRSQ=0.699;LDAF=0.0267;AVGPOST=0.9795;RSQ=0.6885;ERATE=0.0055;THETA=0.0098;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11779596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.956;LDAF=0.2686;AVGPOST=0.9760;RSQ=0.9570;ERATE=0.0124;THETA=0.0145;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 11779597 rs10589242 AAG A 347 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.8358;ERATE=0.0005;THETA=0.0132;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11779650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.949;LDAF=0.2407;AVGPOST=0.9749;RSQ=0.9527;ERATE=0.0116;THETA=0.0043;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 11779698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0075;AVGPOST=0.9976;RSQ=0.8652;ERATE=0.0017;THETA=0.0080;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11779734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11779789 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.935;LDAF=0.1048;AVGPOST=0.9888;RSQ=0.9566;ERATE=0.0007;THETA=0.0106;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 11779798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0224;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11779804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0005;THETA=0.0093;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11779809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2642;AVGPOST=0.9878;RSQ=0.9796;ERATE=0.0015;THETA=0.0069;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 11780077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11780129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11780151 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11780587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11780656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1213;AVGPOST=0.9956;RSQ=0.9867;ERATE=0.0005;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 11780766 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7179;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11780775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0032;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11780811 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0224;AVGPOST=0.9989;RSQ=0.9778;ERATE=0.0003;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11780831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11780862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0985;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0059;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 11780943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11781037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11781077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1877;AVGPOST=0.9979;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 11781098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6816;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0007;THETA=0.0008;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 11781140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781181 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11781313 . A AGG 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11781364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0061;AVGPOST=0.9969;RSQ=0.7924;ERATE=0.0010;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11781379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6870;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0008;THETA=0.0002;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 11781437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1910;AVGPOST=0.9923;RSQ=0.9807;ERATE=0.0013;THETA=0.0004;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 11781440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11781536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.6926;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11781537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3846;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11781585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.723;LDAF=0.0072;AVGPOST=0.9948;RSQ=0.7062;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11781623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2211;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 11781698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11781801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11781840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11781903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6637;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11781990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11782010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6743;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11782038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11782085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11782294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7315;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 11782400 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5459;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11782408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8376;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11782488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5898;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11782489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11782521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5570;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11782577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9222;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11782781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11783240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11783313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11783349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0175;AVGPOST=0.9990;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11783353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11783371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8431;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11783422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11783594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11783638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11783723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11783738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11783929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11784001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11784078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11784171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0228;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11784179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11784229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0227;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11784236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0228;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0014;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11784241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11784310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11784333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11784362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0513;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 11784441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6091;ERATE=0.0011;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11784543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6694;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11784609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7696;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11784682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11784780 . CA C 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4802;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11784840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9211;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11784861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11784910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11784931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0012;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11785024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11785061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6259;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11785245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9458;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11785255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6433;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 11785287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0195;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11785423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11785483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11785526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11785638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11785676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11785677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11785720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7685;ERATE=0.0025;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11785740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11785763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0283;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11785800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11785811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6188;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0008;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 11785816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11785834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9069;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11785881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11785892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9242;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11785898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5182;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11785993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8808;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11786131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11786171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11786181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1811;AVGPOST=0.9952;RSQ=0.9878;ERATE=0.0004;THETA=0.0007;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 11786196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0782;AVGPOST=0.9982;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 11786399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8628;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11786476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9986;RSQ=0.9811;ERATE=0.0003;THETA=0.0042;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11786515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11786522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11786580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11786638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.7224;AVGPOST=0.9966;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 11786735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11786736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0717;AVGPOST=0.9977;RSQ=0.9856;ERATE=0.0004;THETA=0.0019;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 11786780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1560;AVGPOST=0.9948;RSQ=0.9846;ERATE=0.0005;THETA=0.0011;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 11786891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787231 . AG A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787425 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7738;ERATE=0.0003;THETA=0.0048;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11787496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6566;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11787511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5427;ERATE=0.0004;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11787594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9264;ERATE=0.0003;THETA=0.0042;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11787605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6215;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11787658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11787938 . CCA C 38 PASS INDEL;BAVGPOST=0.993;BRSQ=0.493;LDAF=0.0089;AVGPOST=0.9896;RSQ=0.5176;ERATE=0.0040;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11788021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0427;AVGPOST=0.9976;RSQ=0.9801;ERATE=0.0005;THETA=0.0010;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11788027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11788108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9350;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11788128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11788335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9443;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11788399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9418;ERATE=0.0004;THETA=0.0024;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11788476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11788676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7518;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11788699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0257;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11788737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.928;LDAF=0.2034;AVGPOST=0.9815;RSQ=0.9592;ERATE=0.0021;THETA=0.0020;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11788832 . TC T 50 PASS INDEL;BAVGPOST=0.996;BRSQ=0.591;LDAF=0.0069;AVGPOST=0.9963;RSQ=0.7837;ERATE=0.0006;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11788839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0112;AVGPOST=0.9920;RSQ=0.7305;ERATE=0.0011;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11788840 . CGTTTT C 186 PASS INDEL;BAVGPOST=0.997;BRSQ=0.635;LDAF=0.0114;AVGPOST=0.9846;RSQ=0.4549;ERATE=0.0017;THETA=0.0052;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11788840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0451;AVGPOST=0.9990;RSQ=0.9910;ERATE=0.0003;THETA=0.0030;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 11788841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.702;LDAF=0.1736;AVGPOST=0.9435;RSQ=0.8634;ERATE=0.0010;THETA=0.0012;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 11788995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.746;LDAF=0.0110;AVGPOST=0.9921;RSQ=0.6986;ERATE=0.0009;THETA=0.0018;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11789030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7001;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11789114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0055;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11789228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2148;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 11789290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11789320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2048;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 11789321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11789472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9401;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11789571 . CTT C 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4454;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11789639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11789665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11789680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5858;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11789690 . ACCACTGT A 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4321;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11789790 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11789951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7715;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11790227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2631;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 11790250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11790262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11790270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11790276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11790316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8282;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11790329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1871;AVGPOST=0.9949;RSQ=0.9865;ERATE=0.0009;THETA=0.0003;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11790421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1632;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 11790609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11790696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11790793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11791037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1865;AVGPOST=0.9963;RSQ=0.9906;ERATE=0.0006;THETA=0.0006;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 11791052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.950;LDAF=0.2107;AVGPOST=0.9801;RSQ=0.9591;ERATE=0.0032;THETA=0.0011;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 11791124 rs59229363 C CA 10005 PASS INDEL;BAVGPOST=0.966;BRSQ=0.903;LDAF=0.1944;AVGPOST=0.9545;RSQ=0.8914;ERATE=0.0090;THETA=0.0005;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 11791176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9377;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11791209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9987;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11791261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0048;AVGPOST=0.9925;RSQ=0.2934;ERATE=0.0014;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11791542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1873;AVGPOST=0.9941;RSQ=0.9848;ERATE=0.0008;THETA=0.0018;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 11791546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0112;AVGPOST=0.9954;RSQ=0.8290;ERATE=0.0007;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11791550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4375;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11791612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6203;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11791728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6948;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11791769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0574;AVGPOST=0.9976;RSQ=0.9845;ERATE=0.0006;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11791945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4909;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11791948 . TG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4233;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11791959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5088;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11792036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9710;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11792097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0063;AVGPOST=0.9967;RSQ=0.7977;ERATE=0.0010;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11792098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11792149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6488;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11792236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4886;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 11792240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11792241 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11792258 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11792325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8740;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11792580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11792613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6776;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11792659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9554;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11792692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11792700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11792723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5027;AVGPOST=0.9950;RSQ=0.9917;ERATE=0.0010;THETA=0.0005;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 11792737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5811;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11792807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0227;AVGPOST=0.9991;RSQ=0.9838;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11792811 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11792819 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6789;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11792852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8465;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11793090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7796;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11793168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11793197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8871;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11793287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9587;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11793306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7148;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11793376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11793395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9979;RSQ=0.8994;ERATE=0.0006;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11793459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9545;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11793705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8678;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11793861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4025;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0021;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 11794031 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11794237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11794422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0219;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11794456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8402;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11794488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11794533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11794545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11794569 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5375;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 11794587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11794612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11794727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11794744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11794780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11794823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8555;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11794872 . C CT 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6627;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11794932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5992;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11795011 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11795102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5346;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0010;THETA=0.0003;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 11795113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11795327 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11795396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11795461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0078;AVGPOST=0.9972;RSQ=0.8506;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11795620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0067;AVGPOST=0.9981;RSQ=0.8817;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11795624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11795632 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.947;LDAF=0.5715;AVGPOST=0.9552;RSQ=0.9348;ERATE=0.0068;THETA=0.0009;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 11795697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0171;AVGPOST=0.9974;RSQ=0.9373;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11795722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0143;AVGPOST=0.9994;RSQ=0.9801;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11795818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5463;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0007;THETA=0.0004;AC=1192;AN=2184 GT:DS:GL:BD 0.54578757 1
1 11795832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.7803;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11795850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6879;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11795862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.725;LDAF=0.9519;AVGPOST=0.9608;RSQ=0.6772;ERATE=0.0022;THETA=0.0006;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 11795881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4025;AVGPOST=0.9965;RSQ=0.9940;ERATE=0.0006;THETA=0.0008;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 11795929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8818;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11795947 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7077;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11795984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.5214;AVGPOST=0.9926;RSQ=0.9889;ERATE=0.0006;THETA=0.0004;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 11796125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11796182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11796398 . TA T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11796460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11796465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11796624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11796625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8896;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11796633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11796645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9679;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11796653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11796755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11796992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0595;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 11797128 . CAAT C 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5459;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11797392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11797514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.8287;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11797515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7015;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11797792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11797840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11797880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8389;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11797894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3698;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0008;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 11797923 . A AG 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6329;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11797951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9578;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11797966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11797980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9206;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11798001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.958;LDAF=0.1627;AVGPOST=0.9958;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 11798082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6079;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11798117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11798138 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6790;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11798138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11798267 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11798471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9710;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11798536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11798610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0605;AVGPOST=0.9978;RSQ=0.9854;ERATE=0.0004;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 11798635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0016;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11798697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0572;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 11798784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1522;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0008;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 11798817 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9922;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0013;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 11798844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3889;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 11798859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11798992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11799002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11799119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2050;AVGPOST=0.9980;RSQ=0.9949;ERATE=0.0003;THETA=0.0014;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11799435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5437;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11799530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7238;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11799532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9623;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11799605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9567;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11799642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11799714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11799980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9983;RSQ=0.9214;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11800019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7380;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11800459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8855;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11800593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7756;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11800650 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11800861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11800862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7306;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 11800896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6437;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6519;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11801240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11801254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11801280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11801291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801292 . ACT A 2859 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11801361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11801371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11801534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11801858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6522;ERATE=0.0005;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11802074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2166;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0003;THETA=0.0009;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 11802078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7035;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11802206 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0553;AVGPOST=0.9987;RSQ=0.9906;ERATE=0.0003;THETA=0.0009;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 11802271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11802355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6541;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11802390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2325;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 11802432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11802437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1694;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0008;THETA=0.0012;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 11802704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9309;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11802800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9987;RSQ=0.9485;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11802864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11802979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7910;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11803062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11803204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11803322 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9117;ERATE=0.0007;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11803353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11803539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2146;AVGPOST=0.9968;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 11803544 . ATTGT A 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4542;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11803601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5628;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11803639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9604;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11803661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.3171;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11803838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11804247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11804319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11804389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9359;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11804448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2166;AVGPOST=0.9956;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 11804616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11804722 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8120;ERATE=0.0005;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11804800 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0192;AVGPOST=0.9989;RSQ=0.9829;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11804972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0566;AVGPOST=0.9979;RSQ=0.9865;ERATE=0.0004;THETA=0.0019;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 11805015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9694;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11805023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11805077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9655;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11805257 . GCTAA G 186 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805290 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9700;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11805343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5001;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9821;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11805570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0280;AVGPOST=0.9976;RSQ=0.9704;ERATE=0.0004;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11805608 . CTA C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3597;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11805777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11805885 . CAG C 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11805937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11806004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0186;AVGPOST=0.9983;RSQ=0.9647;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11806190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11806268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11806341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7763;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11806507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9507;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11806533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11806560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9095;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11806801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11806888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0063;AVGPOST=0.9949;RSQ=0.7324;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11807045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.9990;AVGPOST=0.9995;RSQ=0.7758;ERATE=0.0003;THETA=0.0023;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 11807119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11807209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11807244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1997;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 11807253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9152;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11807447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11807515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11807571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11807815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11808029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7656;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11808085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11808091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11808116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11808123 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9154;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11808172 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11808211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.8886;ERATE=0.0009;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11808264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7307;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11808442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9318;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11808483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5861;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11808488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8253;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11808534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9736;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11808619 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0317;AVGPOST=0.9943;RSQ=0.9345;ERATE=0.0006;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11808659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.4515;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11808668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11808685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11808981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1186;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 11809021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8868;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11809028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0003;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11809040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11809065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8452;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11809071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11809194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4489;AVGPOST=0.9969;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 11809323 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1916;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0003;THETA=0.0006;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 11809329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8678;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11809449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11809496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8890;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11809498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7525;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11809566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11809733 . T TC 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11809753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11809763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8151;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11809844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11810507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11810680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11810718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2017;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 11810824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11810840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11810992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11811001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0105;AVGPOST=0.9966;RSQ=0.8876;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11811047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11811079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.947;LDAF=0.9385;AVGPOST=0.9927;RSQ=0.9560;ERATE=0.0004;THETA=0.0006;AC=2051;AN=2184 GT:DS:GL:BD 0.93910259 1
1 11811130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0268;AVGPOST=0.9969;RSQ=0.9508;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11811233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7133;ERATE=0.0010;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11811263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6068;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11811311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.2037;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11811344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.4440;AVGPOST=0.9834;RSQ=0.9769;ERATE=0.0035;THETA=0.0005;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 11811418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9835;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11811535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7687;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11811747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11811858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11811902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11811904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11811930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11811937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11811942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11811996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4630;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11812028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11812305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1647;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 11812437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.914;LDAF=0.0189;AVGPOST=0.9993;RSQ=0.9824;ERATE=0.0002;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11812560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.2940;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11812670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11812917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7085;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11812968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6700;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11812991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11812995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6231;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11813120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9421;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11813212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11813446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11813481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7342;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11813547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7487;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11813731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7016;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11813792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0003;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11814073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0064;AVGPOST=0.9950;RSQ=0.6495;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11814369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11814464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2799;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 11814551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5316;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 11814642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11814788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11814873 . TA T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5523;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11814944 . ACT A 203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7064;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11815035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815042 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11815291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8543;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11815345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8854;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11815496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1164;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 11815561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1663;AVGPOST=0.9971;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 11815616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11815686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11815791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7597;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11815868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11815911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11815946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11816155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.931;LDAF=0.0349;AVGPOST=0.9966;RSQ=0.9578;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11816166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11816255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11816334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1148;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 11816674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9581;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11816734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9257;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11816765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1016;AVGPOST=0.9983;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 11816772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1147;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 11816782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7167;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11816822 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11817132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6513;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11817197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1646;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 11817225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7792;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11817516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.9901;AVGPOST=0.9935;RSQ=0.7330;ERATE=0.0006;THETA=0.0012;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 11817519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8106;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11817671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9801;ERATE=0.0003;THETA=0.0041;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11817753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11817795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11817846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11817994 . C CA 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9116;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11818102 . CAG C 98 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6420;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11818242 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11818250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6721;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11818268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11818288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7163;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11818323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11818376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8933;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11818443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.943;LDAF=0.1009;AVGPOST=0.9931;RSQ=0.9721;ERATE=0.0006;THETA=0.0011;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 11818471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8027;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11818679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5224;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11818734 . A AT 2637 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0293;AVGPOST=0.9980;RSQ=0.9729;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 11818762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3509;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11819047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8380;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11819072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11819164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9777;AVGPOST=0.9983;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 11819215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9783;AVGPOST=0.9977;RSQ=0.9563;ERATE=0.0004;THETA=0.0008;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 11819287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9785;AVGPOST=0.9981;RSQ=0.9658;ERATE=0.0003;THETA=0.0008;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 11819291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.7169;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11819409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1031;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0004;THETA=0.0023;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 11819511 . CAT C 8537 PASS INDEL;BAVGPOST=0.990;BRSQ=0.948;LDAF=0.0912;AVGPOST=0.9968;RSQ=0.9836;ERATE=0.0005;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 11819522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5687;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11819683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4365;AVGPOST=0.9946;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 11819760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0431;AVGPOST=0.9967;RSQ=0.9735;ERATE=0.0003;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11819761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7751;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11819785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9756;AVGPOST=0.9978;RSQ=0.9645;ERATE=0.0004;THETA=0.0007;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 11819850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.846;LDAF=0.9571;AVGPOST=0.9681;RSQ=0.6968;ERATE=0.0042;THETA=0.0003;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 11820033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0128;AVGPOST=0.9951;RSQ=0.8393;ERATE=0.0011;THETA=0.0019;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11820045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.566;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7394;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11820046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0269;AVGPOST=0.9967;RSQ=0.9552;ERATE=0.0005;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11820057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9776;AVGPOST=0.9975;RSQ=0.9508;ERATE=0.0008;THETA=0.0005;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 11820177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2968;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0003;THETA=0.0010;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 11820259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4810;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 11820300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11820302 . C CTT 1458 PASS INDEL;BAVGPOST=0.589;BRSQ=0.159;LDAF=0.6563;AVGPOST=0.6387;RSQ=0.3008;ERATE=0.0351;THETA=0.0003;AC=1534;AN=2184 GT:DS:GL:BD 0.70238096 1
1 11820373 . T TTTC 16296 PASS INDEL;BAVGPOST=0.892;BRSQ=0.687;LDAF=0.7515;AVGPOST=0.8158;RSQ=0.6013;ERATE=0.0554;THETA=0.0004;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 11820374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3299;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11820411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.665;LDAF=0.0049;AVGPOST=0.9978;RSQ=0.8147;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11820451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7600;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11820540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6517;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11820579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0217;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11820726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8114;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11820728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11820786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6617;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11820929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.678;LDAF=0.0276;AVGPOST=0.9951;RSQ=0.9277;ERATE=0.0007;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11821261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.416;LDAF=0.0125;AVGPOST=0.9915;RSQ=0.7580;ERATE=0.0007;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11821294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.9729;AVGPOST=0.9891;RSQ=0.8376;ERATE=0.0010;THETA=0.0014;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 11821350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11821399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11821515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0567;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 11821815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8723;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11821831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11821832 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11821845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9857;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11821942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11821978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11822025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9274;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11822034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11822054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9219;AVGPOST=0.9987;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 11822123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11822341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8889;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11822346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8812;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11822409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11822410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11822447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0050;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11822560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9649;ERATE=0.0002;THETA=0.0026;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11822564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5525;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11822611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7240;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0027;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 11822638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11822644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7236;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 11822686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6985;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11822775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.919;LDAF=0.0177;AVGPOST=0.9970;RSQ=0.9469;ERATE=0.0003;THETA=0.0057;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11822876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9636;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11823056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11823105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11823118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6777;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11823120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11823169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11823170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0002;THETA=0.0068;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11823187 MERGED_DEL_2_7246 T ADELA . . SV;BAVGPOST=0.998;BRSQ=0.315;LDAF=0.0040;AVGPOST=0.9933;RSQ=0.3110;ERATE=0.0009;THETA=0.0004;CIEND=-17;33;CIPOS=-18;19;END=213081996;SOURCE=GenomeStrip_213081107_213081996;SVTYPE=DEL;AC=2;AN GT:DS:GL:BD 0.00091575 0
1 11823192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11823207 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11823297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0787;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0013;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 11823354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11823435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11823451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7232;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 11823525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7614;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11823639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0202;AVGPOST=0.9981;RSQ=0.9639;ERATE=0.0003;THETA=0.0030;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11823746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8955;ERATE=0.0004;THETA=0.0078;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11823828 MERGED_DEL_2_7249 T ADELA . . SV;BAVGPOST=0.997;BRSQ=0.179;LDAF=0.0025;AVGPOST=0.9952;RSQ=0.2616;ERATE=0.0008;THETA=0.0008;CIEND=-178;192;CIPOS=-156;215;END=213088300;SOURCE=CNVnator_213081801_213088300;SVTYPE=DEL;AC=2;A GT:DS:GL:BD 0.00091575 0
1 11823886 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.913;LDAF=0.3434;AVGPOST=0.9484;RSQ=0.9183;ERATE=0.0013;THETA=0.0005;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 11823913 . A AG 37 PASS INDEL;BAVGPOST=0.956;BRSQ=0.140;LDAF=0.0670;AVGPOST=0.8900;RSQ=0.2975;ERATE=0.0049;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11823931 rs35362839 T TG 3179 PASS INDEL;BAVGPOST=0.580;BRSQ=0.403;LDAF=0.5328;AVGPOST=0.8085;RSQ=0.7744;ERATE=0.0025;THETA=0.0033;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 11823933 . T TG 137 PASS INDEL;BAVGPOST=0.918;BRSQ=0.126;LDAF=0.0931;AVGPOST=0.8535;RSQ=0.3198;ERATE=0.0061;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11823939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.638;BRSQ=0.387;LDAF=0.3911;AVGPOST=0.7499;RSQ=0.6496;ERATE=0.0048;THETA=0.0032;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 11823973 . CAGG C 124 PASS INDEL;BAVGPOST=0.996;BRSQ=0.173;LDAF=0.0181;AVGPOST=0.9735;RSQ=0.4072;ERATE=0.0016;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11823981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3257;AVGPOST=0.9806;RSQ=0.9680;ERATE=0.0005;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 11824030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0047;AVGPOST=0.9951;RSQ=0.5817;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11824079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0322;AVGPOST=0.9984;RSQ=0.9780;ERATE=0.0003;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11824212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11824231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.931;LDAF=0.6842;AVGPOST=0.9718;RSQ=0.9567;ERATE=0.0019;THETA=0.0002;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 11824254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3306;AVGPOST=0.9818;RSQ=0.9695;ERATE=0.0004;THETA=0.0007;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 11824288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.932;LDAF=0.6932;AVGPOST=0.9731;RSQ=0.9600;ERATE=0.0008;THETA=0.0039;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 11824352 rs60217669 AAAAAAAG A 35666 PASS INDEL;BAVGPOST=0.931;BRSQ=0.882;LDAF=0.6487;AVGPOST=0.9160;RSQ=0.8742;ERATE=0.0078;THETA=0.0047;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 11824367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0002;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11824513 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9681;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11824556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7484;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11824617 . AT A 23308 PASS INDEL;BAVGPOST=0.946;BRSQ=0.916;LDAF=0.6908;AVGPOST=0.9620;RSQ=0.9423;ERATE=0.0020;THETA=0.0012;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 11824631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6083;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11824751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0754;AVGPOST=0.9948;RSQ=0.9709;ERATE=0.0006;THETA=0.0006;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 11824764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0039;AVGPOST=0.9964;RSQ=0.6044;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11824785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.929;LDAF=0.6998;AVGPOST=0.9666;RSQ=0.9510;ERATE=0.0016;THETA=0.0007;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 11824806 rs67178930 A AT 7141 PASS INDEL;BAVGPOST=0.680;BRSQ=0.440;LDAF=0.4899;AVGPOST=0.6955;RSQ=0.4946;ERATE=0.0498;THETA=0.0027;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 11824898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.715;LDAF=0.0090;AVGPOST=0.9950;RSQ=0.7581;ERATE=0.0010;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11824921 rs67340916 TCTCGAA T 18983 PASS INDEL;BAVGPOST=0.925;BRSQ=0.859;LDAF=0.3399;AVGPOST=0.9560;RSQ=0.9299;ERATE=0.0013;THETA=0.0007;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 11824949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.7158;AVGPOST=0.9888;RSQ=0.9822;ERATE=0.0011;THETA=0.0006;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 11824993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.7189;AVGPOST=0.9937;RSQ=0.9897;ERATE=0.0006;THETA=0.0075;AC=1571;AN=2184 GT:DS:GL:BD 0.71932232 1
1 11825006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0723;AVGPOST=0.9989;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 11825101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7234;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0049;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 11825121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7560;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11825210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7229;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 11825221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11825262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7236;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0003;THETA=0.0016;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 11825346 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5641;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11825469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.7053;AVGPOST=0.9739;RSQ=0.9611;ERATE=0.0017;THETA=0.0009;AC=1551;AN=2184 GT:DS:GL:BD 0.71016484 1
1 11825476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0081;AVGPOST=0.9979;RSQ=0.8842;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11825489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.7091;AVGPOST=0.9820;RSQ=0.9737;ERATE=0.0004;THETA=0.0022;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 11825492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.626;LDAF=0.0771;AVGPOST=0.9576;RSQ=0.7875;ERATE=0.0014;THETA=0.0057;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 11825494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.744;BRSQ=0.176;LDAF=0.1904;AVGPOST=0.7632;RSQ=0.3938;ERATE=0.0136;THETA=0.0013;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 11825664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.240;LDAF=0.0936;AVGPOST=0.8805;RSQ=0.4443;ERATE=0.0022;THETA=0.0011;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11825682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.810;LDAF=0.0228;AVGPOST=0.9877;RSQ=0.7825;ERATE=0.0009;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11825688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.313;LDAF=0.0670;AVGPOST=0.9109;RSQ=0.4230;ERATE=0.0053;THETA=0.0022;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11825695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.843;LDAF=0.6849;AVGPOST=0.9234;RSQ=0.8919;ERATE=0.0038;THETA=0.0047;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 11825714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.942;LDAF=0.6380;AVGPOST=0.9558;RSQ=0.9384;ERATE=0.0032;THETA=0.0026;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 11825752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7434;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11825790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.3238;AVGPOST=0.9819;RSQ=0.9689;ERATE=0.0003;THETA=0.0030;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 11825806 . GT G 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5512;ERATE=0.0006;THETA=0.0093;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11825854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7207;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0006;THETA=0.0023;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 11825894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.891;LDAF=0.6412;AVGPOST=0.8726;RSQ=0.8075;ERATE=0.0141;THETA=0.0018;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 11825967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11825994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.492;LDAF=0.0619;AVGPOST=0.9825;RSQ=0.8748;ERATE=0.0010;THETA=0.0009;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 11826146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.6830;AVGPOST=0.9854;RSQ=0.9774;ERATE=0.0005;THETA=0.0015;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 11826209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.6797;AVGPOST=0.9797;RSQ=0.9683;ERATE=0.0009;THETA=0.0064;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 11826226 MERGED_DEL_2_7257 CGCTTGACCCCAATACAAACTCGACAGTAGTTCCAAATAGCCAGAAAATGGCACTTTGAATTTTTCCATCCTGCAAGATCTAAATAATTCTTGTCGTAAAATAGTCAAACGGTCTGAGGTGCCTGACGTCCAGGCATTCTTTTACACATCAGTCCCGTCCTAGCCTCTGTGCCCAGTGCAACTCGTCCCA CACTTG . . SV;BAVGPOST=0.976;BRSQ=0.960;LDAF=0.7170;AVGPOST=0.9867;RSQ=0.9805;ERATE=0.0007;THETA=0.0009;CIEND=-17;33;CIPOS=-18;19;END=213086169;HOMLEN=1;HOMSEQ=G;SOURCE=GenomeStrip_213084284_213086217; GT:DS:GL:BD 0.71703297 1
1 11826307 . CCA C 19 PASS INDEL;BAVGPOST=0.868;BRSQ=0.053;LDAF=0.1047;AVGPOST=0.8356;RSQ=0.3217;ERATE=0.0038;THETA=0.0065;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11826316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.790;LDAF=0.1419;AVGPOST=0.9151;RSQ=0.7720;ERATE=0.0024;THETA=0.0016;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 11826399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.241;LDAF=0.0424;AVGPOST=0.9385;RSQ=0.3955;ERATE=0.0027;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11826402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.610;LDAF=0.0168;AVGPOST=0.9834;RSQ=0.5653;ERATE=0.0014;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11826440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.248;LDAF=0.0364;AVGPOST=0.9553;RSQ=0.4882;ERATE=0.0018;THETA=0.0029;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11826463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.436;LDAF=0.0182;AVGPOST=0.9801;RSQ=0.5461;ERATE=0.0008;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11826470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.431;LDAF=0.0151;AVGPOST=0.9803;RSQ=0.4467;ERATE=0.0015;THETA=0.0026;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11826633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.291;LDAF=0.0061;AVGPOST=0.9926;RSQ=0.5041;ERATE=0.0005;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11826634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.204;LDAF=0.1410;AVGPOST=0.8287;RSQ=0.4369;ERATE=0.0071;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 11826684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.793;BRSQ=0.175;LDAF=0.1855;AVGPOST=0.7725;RSQ=0.3899;ERATE=0.0166;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 11826700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.662;LDAF=0.1360;AVGPOST=0.9010;RSQ=0.7077;ERATE=0.0044;THETA=0.0013;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 11827208 . A ACT 102 PASS INDEL;BAVGPOST=0.964;BRSQ=0.170;LDAF=0.0532;AVGPOST=0.9108;RSQ=0.2694;ERATE=0.0077;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11827468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.438;LDAF=0.0310;AVGPOST=0.9549;RSQ=0.3697;ERATE=0.0012;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11827486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7602;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11827910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9538;ERATE=0.0003;THETA=0.0178;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11828002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8563;ERATE=0.0003;THETA=0.0046;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11828094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0124;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11828252 . T TTA 605 PASS INDEL;BAVGPOST=0.992;BRSQ=0.667;LDAF=0.0125;AVGPOST=0.9903;RSQ=0.6952;ERATE=0.0021;THETA=0.0033;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11828297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11828385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6932;ERATE=0.0003;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11828394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11828431 . C CA 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11828442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7805;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11828802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4916;ERATE=0.0007;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11828827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7334;ERATE=0.0003;THETA=0.0096;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11828830 rs1346997 A AG 49 PASS INDEL;BAVGPOST=0.984;BRSQ=0.288;LDAF=0.0143;AVGPOST=0.9795;RSQ=0.4208;ERATE=0.0013;THETA=0.0153;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11828947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1484;AVGPOST=0.9954;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 11829003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8557;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11829081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11829221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11829304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7590;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11829309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7836;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11829318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11829325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8701;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11829356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11829403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5216;AVGPOST=0.9956;RSQ=0.9936;ERATE=0.0004;THETA=0.0007;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 11829470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11829695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.2361;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11829724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11829775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3428;AVGPOST=0.9951;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 11829787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11829795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4193;AVGPOST=0.9965;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 11829812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6132;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11829850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11829855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11829937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6933;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1387;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 11830531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11830717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0012;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11830852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11830863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5082;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11830986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2554;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11830989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11831024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0160;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11831157 . AT A 382 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8518;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11831209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11831210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11831241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11831289 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3807;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11831385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11831494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11831523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9545;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11831566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11831615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11831619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11831633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7677;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11831890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0450;AVGPOST=0.9983;RSQ=0.9856;ERATE=0.0004;THETA=0.0002;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 11831918 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11831921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4994;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11831932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7577;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11831936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5924;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 11831970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6795;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11832162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11832236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11832256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7536;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11832283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7384;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11832293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11832295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4196;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 11832327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4988;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0006;THETA=0.0010;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 11832709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11832825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4979;AVGPOST=0.9964;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 11832853 . T TA 61 PASS INDEL;BAVGPOST=0.997;BRSQ=0.508;LDAF=0.0051;AVGPOST=0.9934;RSQ=0.4878;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11832888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.551;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6946;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11833009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0274;AVGPOST=0.9986;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11833033 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9294;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11833037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5517;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11833043 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3803;AVGPOST=0.9940;RSQ=0.9911;ERATE=0.0007;THETA=0.0004;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 11833094 . T TC 650 PASS INDEL;BAVGPOST=0.666;BRSQ=0.209;LDAF=0.2835;AVGPOST=0.6711;RSQ=0.3201;ERATE=0.0370;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 11833111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9408;ERATE=0.0005;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11833163 rs60533825 T TTC 29041 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3867;AVGPOST=0.9943;RSQ=0.9905;ERATE=0.0007;THETA=0.0003;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 11833191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0064;AVGPOST=0.9918;RSQ=0.4724;ERATE=0.0008;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11833214 . CAG C 162 PASS INDEL;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.5424;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11833392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0184;AVGPOST=0.9949;RSQ=0.8848;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11833423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4437;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0006;THETA=0.0004;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 11833517 . TAAG T 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4573;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11833637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11833648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9210;AVGPOST=0.9989;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 11833669 . ATTG A 417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8500;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11833832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8472;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11833946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11833960 rs34437031 G GT 14129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0923;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 11834025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6838;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11834069 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3915;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834087 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8641;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11834097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4154;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834202 . C CT 4658 PASS INDEL;BAVGPOST=0.956;BRSQ=0.788;LDAF=0.1423;AVGPOST=0.8960;RSQ=0.6687;ERATE=0.0255;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 11834253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4224;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834259 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.947;LDAF=0.8512;AVGPOST=0.9689;RSQ=0.9103;ERATE=0.0055;THETA=0.0004;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 11834364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.459;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5684;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11834386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0090;AVGPOST=0.9982;RSQ=0.9120;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11834540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11834605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.6482;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11834638 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4165;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0006;THETA=0.0007;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 11834646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11834746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5330;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11834893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11834957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11834969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11834990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4158;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 11835037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9750;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11835121 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11835139 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5114;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11835275 . TTCAG T 33997 PASS INDEL;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.2804;AVGPOST=0.9939;RSQ=0.9884;ERATE=0.0012;THETA=0.0004;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 11835357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11835511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8033;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11835547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8657;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11835715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11835838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9793;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11835848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11835870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0526;AVGPOST=0.9985;RSQ=0.9889;ERATE=0.0003;THETA=0.0008;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 11835874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11836036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11836059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7443;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11836113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4827;AVGPOST=0.9914;RSQ=0.9859;ERATE=0.0014;THETA=0.0008;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 11836143 . A AC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5913;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11836149 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9183;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11836171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8837;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=1931;AN=2184 GT:DS:GL:BD 0.88415754 1
1 11836204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11836359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11836374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.8847;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 11836472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11836499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4741;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0486;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11836514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11836529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7248;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0641;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 11836593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6305;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11836619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11836673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8831;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 11836820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7730;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11836977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5870;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11837003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11837027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9993;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11837042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4577;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 11837061 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11837085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11837091 . GA G 931 PASS INDEL;BAVGPOST=0.826;BRSQ=0.375;LDAF=0.2117;AVGPOST=0.7654;RSQ=0.4152;ERATE=0.0622;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 11837145 rs77898940 AT A 70048 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8830;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 11837146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11837180 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7745;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11837197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0134;AVGPOST=0.9992;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11837244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8835;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=1931;AN=2184 GT:DS:GL:BD 0.88415754 1
1 11837246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8496;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11837282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4058;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 11837283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8823;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1928;AN=2184 GT:DS:GL:BD 0.88278389 1
1 11837332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8818;AVGPOST=0.9974;RSQ=0.9911;ERATE=0.0004;THETA=0.0007;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 11837406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7325;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11837448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.673;LDAF=0.0109;AVGPOST=0.9926;RSQ=0.7247;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11837449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0180;AVGPOST=0.9911;RSQ=0.8120;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11837470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11837505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11837518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8923;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11837605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11837682 . CTA C 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5101;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11837683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6100;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11837801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11837806 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9351;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11837829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8826;AVGPOST=0.9981;RSQ=0.9924;ERATE=0.0006;THETA=0.0011;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 11837974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0062;AVGPOST=0.9976;RSQ=0.8611;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11838036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4560;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9320;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11838167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.7001;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11838199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0097;AVGPOST=0.9960;RSQ=0.8514;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11838245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11838283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.842;LDAF=0.4119;AVGPOST=0.9001;RSQ=0.8406;ERATE=0.0190;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 11838424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9343;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11838448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9376;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11838463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0131;AVGPOST=0.9992;RSQ=0.9712;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11838691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0207;AVGPOST=0.9987;RSQ=0.9763;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11838694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5527;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11838794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11838864 . CTTAG C 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8033;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11838885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11838889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11838907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6483;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 11838938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8364;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11839012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5084;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 11839032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8254;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11839076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7618;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11839120 . TTTTC T 2938 PASS INDEL;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0239;AVGPOST=0.9932;RSQ=0.8978;ERATE=0.0008;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11839471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0384;AVGPOST=0.9982;RSQ=0.9793;ERATE=0.0007;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11839517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9979;RSQ=0.9816;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 11839642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11839757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0411;AVGPOST=0.9967;RSQ=0.9682;ERATE=0.0004;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 11839839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8136;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11839925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8044;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11839951 . T TA 44 PASS INDEL;BAVGPOST=0.991;BRSQ=0.413;LDAF=0.0139;AVGPOST=0.9793;RSQ=0.4170;ERATE=0.0032;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11840026 . AT A 114 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5449;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11840035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.675;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7504;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11840046 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11840064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840082 . G GA 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4566;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0417;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11840191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=0.9985;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11840216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9420;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11840218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7101;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11840346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11840358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0148;AVGPOST=0.9982;RSQ=0.9529;ERATE=0.0004;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11840707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11840906 . AC A 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11840916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9238;ERATE=0.0004;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11841071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.961;LDAF=0.1314;AVGPOST=0.9965;RSQ=0.9872;ERATE=0.0007;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 11841076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11841359 rs111838234 CA C 12777 PASS INDEL;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0984;AVGPOST=0.9971;RSQ=0.9865;ERATE=0.0005;THETA=0.0005;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 11841414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7606;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11841483 . GA G 466 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.8948;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11841517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11841539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8579;ERATE=0.0009;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11841540 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8981;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11841591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11841632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8945;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11841662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8453;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11841750 . G GT 856 PASS INDEL;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0140;AVGPOST=0.9930;RSQ=0.8051;ERATE=0.0010;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11842046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11842091 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0405;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0003;THETA=0.0013;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11842209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0413;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11842315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5662;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11842326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9079;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11842360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11842361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0411;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0004;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11842420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0376;AVGPOST=0.9981;RSQ=0.9814;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11842469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.591;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5500;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11842475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11842502 . CTT C 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6494;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11842559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11842618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9098;ERATE=0.0003;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11842638 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9347;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11842654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11842658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4920;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 11842748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0138;AVGPOST=0.9979;RSQ=0.9471;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11842782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.8947;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11842934 rs111473197 GTGTGTGTGTGTGTA G 14735 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0458;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 11842952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7839;AVGPOST=0.9930;RSQ=0.9851;ERATE=0.0003;THETA=0.0004;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 11843005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0361;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11843111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5752;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11843147 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9658;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11843173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.782;LDAF=0.0239;AVGPOST=0.9751;RSQ=0.6186;ERATE=0.0021;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11843225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.7976;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11843227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.784;LDAF=0.0310;AVGPOST=0.9723;RSQ=0.6574;ERATE=0.0056;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11843229 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11843232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9542;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11843285 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11843299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11843336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11843349 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6031;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11843353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11843440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8339;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11843797 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11843905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7782;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11844055 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11844084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11844224 . GA G 2532 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11844358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9978;RSQ=0.9637;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11844425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0312;AVGPOST=0.9979;RSQ=0.9766;ERATE=0.0005;THETA=0.0021;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11844470 . AAAAAG A 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4256;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4070;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844542 . CTCTGAT C 761 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11844592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.991;LDAF=0.4529;AVGPOST=0.9957;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 11844713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9988;RSQ=0.9766;ERATE=0.0004;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11844821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11844843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7588;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11844946 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0228;AVGPOST=0.9991;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11845073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4276;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11845087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5341;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11845133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7790;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11845137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0924;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 11845198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11845298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7548;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11845381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11845409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11845450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11845513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0646;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 11845541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0066;AVGPOST=0.9983;RSQ=0.8981;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11845680 . CG C 1249 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0143;AVGPOST=0.9989;RSQ=0.9650;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11845680 . G GA 1608 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0182;AVGPOST=0.9947;RSQ=0.8982;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11845683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9105;ERATE=0.0004;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11845720 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6932;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11845733 . CA C 401 PASS INDEL;BAVGPOST=0.996;BRSQ=0.771;LDAF=0.0090;AVGPOST=0.9948;RSQ=0.7735;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11845815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6928;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0008;THETA=0.0005;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 11845819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7851;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 11845903 . T TC 589 PASS INDEL;BAVGPOST=0.995;BRSQ=0.731;LDAF=0.0136;AVGPOST=0.9913;RSQ=0.7463;ERATE=0.0014;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11845936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4553;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11846137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0653;AVGPOST=0.9985;RSQ=0.9914;ERATE=0.0003;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 11846165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5613;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11846215 . C CATT 435 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5469;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11846296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7315;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11846306 rs112832478 C CA 69850 PASS INDEL;BAVGPOST=0.978;BRSQ=0.936;LDAF=0.8040;AVGPOST=0.9535;RSQ=0.8850;ERATE=0.0172;THETA=0.0003;AC=1778;AN=2184 GT:DS:GL:BD 0.81410259 1
1 11846366 . CAG C 143 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11846392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7324;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11846439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9334;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11846500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11846672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11846724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11846728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4384;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11846866 . T TC 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6652;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11846888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8293;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11846987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9996;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11847062 . G GT 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11847097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11847135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4951;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0005;THETA=0.0017;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 11847277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0077;AVGPOST=0.9972;RSQ=0.8426;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11847368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.658;LDAF=0.0106;AVGPOST=0.9929;RSQ=0.7265;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11847445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11847495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9263;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11847601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8597;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11847686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11847852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11847904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11847991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11848012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8460;AVGPOST=0.9970;RSQ=0.9912;ERATE=0.0008;THETA=0.0007;AC=1849;AN=2184 GT:DS:GL:BD 0.84661174 1
1 11848134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7574;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11848208 . A AG 416 PASS INDEL;BAVGPOST=0.825;BRSQ=0.423;LDAF=0.1811;AVGPOST=0.8125;RSQ=0.5330;ERATE=0.0096;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 11848208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11848237 . TACAC T 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5224;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11848240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5100;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11848299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9703;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11848453 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5904;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11848455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.817;LDAF=0.0330;AVGPOST=0.9876;RSQ=0.8673;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11848525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8478;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 11848529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5364;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11848768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11848892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.6730;AVGPOST=0.9909;RSQ=0.9860;ERATE=0.0012;THETA=0.0003;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 11849011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0828;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 11849114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5786;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11849117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9991;RSQ=0.9788;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11849277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8373;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11849393 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11849568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11849591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.911;LDAF=0.0802;AVGPOST=0.9831;RSQ=0.9267;ERATE=0.0003;THETA=0.0001;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 11849706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2641;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0004;THETA=0.0007;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 11849772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6778;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 11849786 . A AT 481 PASS INDEL;BAVGPOST=0.988;BRSQ=0.697;LDAF=0.0294;AVGPOST=0.9684;RSQ=0.5856;ERATE=0.0074;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11849869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6458;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11849881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11849929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11849985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.919;LDAF=0.0763;AVGPOST=0.9897;RSQ=0.9464;ERATE=0.0004;THETA=0.0006;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 11850059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11850086 rs111372184 TC T 807 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9359;ERATE=0.0006;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11850166 . TA T 816 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0078;AVGPOST=0.9980;RSQ=0.9132;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11850168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.6867;AVGPOST=0.9920;RSQ=0.9882;ERATE=0.0005;THETA=0.0017;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 11850196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5051;ERATE=0.0006;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11850213 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7674;ERATE=0.0005;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11850275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11850283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11850542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6594;ERATE=0.0004;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11850555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5532;ERATE=0.0003;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11850623 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11850675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0122;AVGPOST=0.9982;RSQ=0.9318;ERATE=0.0004;THETA=0.0096;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11850684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7311;ERATE=0.0003;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11850710 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.947;LDAF=0.5782;AVGPOST=0.9626;RSQ=0.9445;ERATE=0.0046;THETA=0.0025;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 11850745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0002;THETA=0.0087;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11850907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0202;AVGPOST=0.9963;RSQ=0.9257;ERATE=0.0005;THETA=0.0225;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 11850954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7104;ERATE=0.0002;THETA=0.0226;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11850997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8845;ERATE=0.0002;THETA=0.0152;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11851047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11851053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7995;ERATE=0.0003;THETA=0.0191;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11851064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0256;AVGPOST=0.9961;RSQ=0.9350;ERATE=0.0009;THETA=0.0198;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11851281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0136;AVGPOST=0.9988;RSQ=0.9657;ERATE=0.0003;THETA=0.0137;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11851406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0002;THETA=0.0204;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11851464 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9212;ERATE=0.0003;THETA=0.0149;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11851483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.913;LDAF=0.2868;AVGPOST=0.9572;RSQ=0.9244;ERATE=0.0087;THETA=0.0135;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 11851508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11851593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11851600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9622;ERATE=0.0002;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11851617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9041;ERATE=0.0003;THETA=0.0086;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11851685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0324;AVGPOST=0.9963;RSQ=0.9570;ERATE=0.0021;THETA=0.0012;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11851692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8463;AVGPOST=0.9893;RSQ=0.9736;ERATE=0.0004;THETA=0.0057;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 11851729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6106;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11851748 . T TG 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5295;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11851828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9423;ERATE=0.0003;THETA=0.0065;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11851870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7850;ERATE=0.0004;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11851873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9671;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11851879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0482;AVGPOST=0.9986;RSQ=0.9869;ERATE=0.0002;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11851884 . TG T 2084 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0318;AVGPOST=0.9977;RSQ=0.9689;ERATE=0.0004;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11851953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11851969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4105;AVGPOST=0.9888;RSQ=0.9840;ERATE=0.0002;THETA=0.0009;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 11851970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11851976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9213;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11852054 . ATATTTT A 763 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8960;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11852054 . TA T 273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8349;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11852062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5879;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11852156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9561;ERATE=0.0003;THETA=0.0022;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11852163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11852191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8719;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11852324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9303;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11852370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11852381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11852393 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9063;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11852431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5466;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11852456 . C CA 1955 PASS INDEL;BAVGPOST=0.989;BRSQ=0.919;LDAF=0.0691;AVGPOST=0.9692;RSQ=0.8067;ERATE=0.0051;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11852473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7468;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11852568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11852627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6701;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11852660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11852665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11852693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0316;AVGPOST=0.9987;RSQ=0.9856;ERATE=0.0002;THETA=0.0014;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11852702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11852718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11852741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9984;RSQ=0.9825;ERATE=0.0003;THETA=0.0044;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11852826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7642;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11852827 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11852848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5418;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11852986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8191;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 11852988 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11853476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7404;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11853516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11853654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2705;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 11853657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11853686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9034;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11853746 . TG T 250 PASS INDEL;BAVGPOST=0.985;BRSQ=0.711;LDAF=0.0454;AVGPOST=0.9548;RSQ=0.5820;ERATE=0.0163;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 11853785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7527;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11853800 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5031;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11853914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9818;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11853920 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7353;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11854033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6892;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11854036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4997;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0006;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 11854130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9461;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11854199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11854369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11854564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4881;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11854613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8008;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11854627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5594;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11854689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8941;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11854787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11854835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11854930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11854995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1654;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 11855044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4998;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0016;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 11855230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4881;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11855246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9079;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11855294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4999;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0007;THETA=0.0010;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 11855298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11855381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1654;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0002;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 11855404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11855427 rs5781098 CTCTAA C 24846 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2484;AVGPOST=0.9915;RSQ=0.9814;ERATE=0.0008;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 11855494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11856015 . AAT A 2956 PASS INDEL;BAVGPOST=0.936;BRSQ=0.896;LDAF=0.4677;AVGPOST=0.9587;RSQ=0.9437;ERATE=0.0009;THETA=0.0003;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 11856070 . AT A 44728 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4961;AVGPOST=0.9912;RSQ=0.9876;ERATE=0.0005;THETA=0.0003;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 11856071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11856084 . G GA 74 PASS INDEL;BAVGPOST=0.986;BRSQ=0.525;LDAF=0.0280;AVGPOST=0.9618;RSQ=0.4438;ERATE=0.0089;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11856185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5295;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11856193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11856217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11856381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11856628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11856667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6109;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11856798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11856829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9062;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11856865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7823;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11856906 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11856949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9377;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11856978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11857063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6181;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11857088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11857110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9497;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11857129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5573;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11857147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9703;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11857334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9472;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11857371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.8975;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11857395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11857605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11857633 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1668;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 11857702 rs66798804 G GGA 16676 PASS INDEL;BAVGPOST=0.928;BRSQ=0.859;LDAF=0.4170;AVGPOST=0.8851;RSQ=0.8127;ERATE=0.0500;THETA=0.0005;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 11857919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11857992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11858034 . CAT C 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6008;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11858107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2348;AVGPOST=0.9964;RSQ=0.9913;ERATE=0.0005;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 11858108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9613;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11858183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11858189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11858382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11858411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6677;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11858416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11858520 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8592;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11858606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11858610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11858626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0005;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11858729 . AT A 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8969;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11858760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6514;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11858790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5165;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11858812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11858882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11859057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11859140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9205;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11859275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11859376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8592;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11859442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11859465 . GT G 2535 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9981;RSQ=0.9823;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 11859478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.928;LDAF=0.9715;AVGPOST=0.9938;RSQ=0.9053;ERATE=0.0009;THETA=0.0002;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 11859500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.8897;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11859544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0597;AVGPOST=0.9984;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 11859607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8175;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11859777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11859804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1103;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 11859817 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7732;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11859837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7899;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11860053 . TAG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11860060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1055;AVGPOST=0.9933;RSQ=0.9749;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 11860110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1092;AVGPOST=0.9950;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 11860111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8500;ERATE=0.0014;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11860138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0600;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 11860238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11860290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4845;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11860328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11860396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5777;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11860503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11860548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11860624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.935;LDAF=0.1560;AVGPOST=0.9901;RSQ=0.9709;ERATE=0.0023;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 11860860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1203;AVGPOST=0.9958;RSQ=0.9844;ERATE=0.0007;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 11860938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1098;AVGPOST=0.9969;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 11861076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7683;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11861103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11861104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11861441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11861569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1533;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 11861633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4148;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 11861751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11861967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0650;AVGPOST=0.9983;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 11862021 . A AT 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11862195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0183;AVGPOST=0.9992;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 11862300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11862383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.497;LDAF=0.0072;AVGPOST=0.9916;RSQ=0.5363;ERATE=0.0029;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11862439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7035;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11862514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.431;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11862741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9194;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11862919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11862935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11863035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7248;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11863047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6192;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11863048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7078;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11863261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6055;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11863285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0650;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 11863341 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.8007;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11863345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2537;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 11863368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6298;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11863439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1723;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 11863488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11863561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6995;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11863710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11863794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11863870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7021;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11864078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11864086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11864143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11864280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1069;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 11864309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5956;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11864463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11864526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8136;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11864533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11864559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1092;AVGPOST=0.9966;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 11864745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11864753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2926;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 11865167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6224;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11865181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8433;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11865193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11865262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8396;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11865392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11865416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11865455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11865555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7278;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11865715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9037;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11865797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11865877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0582;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 11865899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8878;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11866040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9983;RSQ=0.9839;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 11866071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8719;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11866251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11866301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9394;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11866340 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11866420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0628;AVGPOST=0.9973;RSQ=0.9833;ERATE=0.0004;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 11866433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9709;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11866504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11866530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6037;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11866536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8361;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11866639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4805;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11866662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11866692 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11866813 . AG A 481 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9482;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11866903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7854;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11866913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7918;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11867083 rs75735816 AC A 48068 PASS INDEL;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5986;AVGPOST=0.9832;RSQ=0.9750;ERATE=0.0037;THETA=0.0004;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 11867396 . G GT 271 PASS INDEL;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0239;AVGPOST=0.9813;RSQ=0.6669;ERATE=0.0113;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11867478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9992;RSQ=0.9753;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11867501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8532;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11867682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5360;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11867820 . CA C 3048 PASS INDEL;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0227;AVGPOST=0.9987;RSQ=0.9748;ERATE=0.0002;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11867827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11867969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11868058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11868221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11868222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0583;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 11868256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11868276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9342;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11868277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11868435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6255;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0019;THETA=0.0004;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 11868510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 11868604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11868607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0003;THETA=0.0017;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 11868786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9890;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11868973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11869057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11869107 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11869122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11869135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1478;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 11869693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11869762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7962;ERATE=0.0012;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11869804 . AC A 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11869833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11869853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11869870 . CAG C 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11870052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6766;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11870134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11870162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9086;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11870183 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11870218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.9971;AVGPOST=0.9991;RSQ=0.9006;ERATE=0.0003;THETA=0.0005;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 11870276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11870288 . GC G 524 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9173;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11870410 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8585;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11870587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.9978;AVGPOST=0.9987;RSQ=0.7785;ERATE=0.0003;THETA=0.0003;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 11870628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0305;AVGPOST=0.9988;RSQ=0.9838;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11870654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7072;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11870662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8581;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11870673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11870720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11870771 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6796;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11870872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8670;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11870908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8380;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11870909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6439;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 11871002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9396;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11871373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7416;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11871489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7143;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 11871490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11871680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1620;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 11871751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4359;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 11871775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7495;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11871816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11871828 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11871934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11872047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11872056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4214;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0011;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 11872113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11872136 . TGAGA T 1753 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9292;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11872148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0119;AVGPOST=0.9986;RSQ=0.9542;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11872206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11872207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0147;AVGPOST=0.9963;RSQ=0.9079;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11872238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11872343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11872388 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8085;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11872488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5643;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 11872603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9631;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11872615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0308;AVGPOST=0.9983;RSQ=0.9757;ERATE=0.0003;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 11872616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11872627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11872653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11872838 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6611;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11872860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0112;AVGPOST=0.9992;RSQ=0.9688;ERATE=0.0003;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11872863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7998;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 11873013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0410;AVGPOST=0.9983;RSQ=0.9840;ERATE=0.0004;THETA=0.0014;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11873083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6844;ERATE=0.0003;THETA=0.0052;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11873152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8920;ERATE=0.0003;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11873291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7397;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11873296 . C CT 3185 PASS INDEL;BAVGPOST=0.963;BRSQ=0.886;LDAF=0.1707;AVGPOST=0.9242;RSQ=0.8255;ERATE=0.0025;THETA=0.0022;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 11873338 rs77155383 T TA 19572 PASS INDEL;BAVGPOST=0.979;BRSQ=0.940;LDAF=0.1396;AVGPOST=0.9798;RSQ=0.9524;ERATE=0.0004;THETA=0.0011;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 11873340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11873382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6449;ERATE=0.0005;THETA=0.0160;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11873406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9694;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11873479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6538;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11873584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4814;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7722;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11873686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6396;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11873747 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7367;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11873750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0357;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11873781 . CA C 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4936;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11873862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11873894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11874004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11874025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11874027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7225;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11874152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3031;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 11874166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 11874294 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11874366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9992;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11874456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7505;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11874549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6356;AVGPOST=0.9965;RSQ=0.9933;ERATE=0.0010;THETA=0.0002;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 11874565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5656;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11874576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11874660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11874693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0533;AVGPOST=0.9970;RSQ=0.9768;ERATE=0.0009;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 11874821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11874870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0314;AVGPOST=0.9986;RSQ=0.9801;ERATE=0.0006;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11875067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2675;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 11875403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11875450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6744;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11875497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11875602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5286;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11875719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2285;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 11875813 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11875849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3030;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 11875878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11875907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0517;AVGPOST=0.9984;RSQ=0.9861;ERATE=0.0004;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 11876016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0841;AVGPOST=0.9984;RSQ=0.9915;ERATE=0.0003;THETA=0.0001;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 11876033 . C CA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4635;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3030;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 11876138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0326;AVGPOST=0.9992;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 11876139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11876163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7265;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11876176 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6471;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2378;AVGPOST=0.9955;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 11876365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9508;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11876370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7829;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11876611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6364;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11876753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2132;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 11876938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7721;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11876979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11876996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6898;ERATE=0.0013;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11877015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6928;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11877083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9966;RSQ=0.9272;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11877165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7328;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11877201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11877408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11877454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11877551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8337;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11877621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11877659 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11877798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11877868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0076;AVGPOST=0.9973;RSQ=0.8747;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11877892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6604;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11878086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4765;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11878114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0075;AVGPOST=0.9961;RSQ=0.7917;ERATE=0.0014;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11878115 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6473;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11878383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11878385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2662;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0001;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 11878426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6633;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11878681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.737;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7009;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11878726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0163;AVGPOST=0.9924;RSQ=0.8260;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11878768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0074;AVGPOST=0.9972;RSQ=0.8503;ERATE=0.0006;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11878800 . C CA 544 PASS INDEL;BAVGPOST=0.942;BRSQ=0.547;LDAF=0.1205;AVGPOST=0.8523;RSQ=0.4491;ERATE=0.0268;THETA=0.0083;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 11878901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0007;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11878965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9759;ERATE=0.0003;THETA=0.0037;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11878982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.1508;AVGPOST=0.9882;RSQ=0.9694;ERATE=0.0018;THETA=0.0011;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 11879054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.6188;AVGPOST=0.9939;RSQ=0.9912;ERATE=0.0011;THETA=0.0009;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 11879108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8947;ERATE=0.0003;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11879164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11879203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4877;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11879303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11879346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9307;ERATE=0.0003;THETA=0.0041;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11879429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3763;AVGPOST=0.9930;RSQ=0.9903;ERATE=0.0009;THETA=0.0005;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 11879499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5556;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11879583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6476;AVGPOST=0.9965;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 11879682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11879704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0066;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11879717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11879799 . GT G 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11879811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7239;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11879818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5326;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11879876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11880003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0386;AVGPOST=0.9983;RSQ=0.9849;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11880243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11880248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11880316 . C CT 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.475;LDAF=0.0035;AVGPOST=0.9945;RSQ=0.4038;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11880330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11880418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11880419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11880707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6996;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11880728 rs67599169 CG C 2525 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9592;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11880731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11880732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11880754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4834;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11880761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1229;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11880821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.2487;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 11880863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1253;AVGPOST=0.9973;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 11880920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0227;AVGPOST=0.9986;RSQ=0.9780;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11881025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3595;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0007;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 11881037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7216;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11881111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6264;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11881119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8972;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11881135 . AT A 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11881143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3593;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0006;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 11881155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11881156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11881185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7535;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11881203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11881222 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11881237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11881243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0138;AVGPOST=0.9957;RSQ=0.8737;ERATE=0.0007;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11881366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0447;AVGPOST=0.9948;RSQ=0.9538;ERATE=0.0015;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11881426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0047;AVGPOST=0.9974;RSQ=0.7792;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11881508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6024;AVGPOST=0.9940;RSQ=0.9905;ERATE=0.0007;THETA=0.0004;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 11881579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9283;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11881721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8727;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11881872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11881942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11882036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0150;AVGPOST=0.9943;RSQ=0.8521;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11882201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11882331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7417;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11882446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9010;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11882869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0073;AVGPOST=0.9986;RSQ=0.9188;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11882870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9984;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11882910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6456;ERATE=0.0011;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11883059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11883151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11883159 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11883209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8635;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11883359 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9250;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11883480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11883528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8034;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11883563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11883604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11883631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6830;ERATE=0.0016;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11883725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8028;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11883925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8108;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11883928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9313;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11883946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4580;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11883989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11883996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5176;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 11883997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8363;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11884095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11884274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11884291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11884341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8190;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11884365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11884483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8164;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11884667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11884754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5128;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0001;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 11884770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1959;AVGPOST=0.9974;RSQ=0.9934;ERATE=0.0006;THETA=0.0006;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 11884820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11884847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1972;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 11884885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1971;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 11884894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11885322 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6772;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11885323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6213;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 11885389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11885630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11885644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0161;AVGPOST=0.9983;RSQ=0.9599;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11885709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0059;AVGPOST=0.9978;RSQ=0.8599;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11885938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.544;LDAF=0.0055;AVGPOST=0.9930;RSQ=0.5081;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11886000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.7303;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11886057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0054;AVGPOST=0.9945;RSQ=0.6144;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11886061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9782;ERATE=0.0004;THETA=0.0018;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11886069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7344;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11886113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4947;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11886186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11886260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.565;LDAF=0.0101;AVGPOST=0.9900;RSQ=0.5981;ERATE=0.0016;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11886293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.903;LDAF=0.4239;AVGPOST=0.9269;RSQ=0.8900;ERATE=0.0104;THETA=0.0003;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 11886362 rs34531279 C CA 2275 PASS INDEL;BAVGPOST=0.883;BRSQ=0.622;LDAF=0.2072;AVGPOST=0.8520;RSQ=0.6686;ERATE=0.0178;THETA=0.0003;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 11886406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.899;LDAF=0.2957;AVGPOST=0.9300;RSQ=0.8733;ERATE=0.0097;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 11886424 rs943760 A AT 24184 PASS INDEL;BAVGPOST=0.971;BRSQ=0.307;LDAF=0.9423;AVGPOST=0.9176;RSQ=0.4101;ERATE=0.0083;THETA=0.0004;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 11886424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1692;AVGPOST=0.9985;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 11886550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7041;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11886813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6915;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11886851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8220;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11886879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6982;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11886931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8209;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11887026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2179;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 11887050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6317;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11887166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7924;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11887208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8958;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11887289 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11887295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7696;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11887390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7883;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11887459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6215;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11887518 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9570;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11887519 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8706;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11887685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9992;RSQ=0.9779;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11887968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11887976 . CTG C 252 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8835;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11888107 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0373;AVGPOST=0.9980;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11888112 . ACTT A 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11888143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1093;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 11888186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11888195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9337;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11888268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0697;AVGPOST=0.9984;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 11888280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11888303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.8953;ERATE=0.0003;THETA=0.0050;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11888370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11888456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11888464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4529;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 11888588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8235;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11888618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6629;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11888640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4529;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 11888669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11889108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3048;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 11889157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3050;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 11889166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11889217 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11889248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11889254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11889387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11889428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11889452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7703;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11889594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11889596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11889633 . T TGTTTTAG 1935 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11889703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0087;AVGPOST=0.9914;RSQ=0.6422;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11889778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.8073;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11889857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.913;LDAF=0.0326;AVGPOST=0.9973;RSQ=0.9659;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 11889873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5557;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11890002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7106;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11890030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11890154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0214;AVGPOST=0.9990;RSQ=0.9810;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11890249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11890291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7422;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11890374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7586;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11890390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11890450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0471;AVGPOST=0.9977;RSQ=0.9791;ERATE=0.0004;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11890587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11890652 . T TC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4105;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11890683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0585;AVGPOST=0.9978;RSQ=0.9841;ERATE=0.0006;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 11890706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9189;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11890707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11890729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2378;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 11890908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3488;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11890938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9972;RSQ=0.3634;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11890940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6700;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11890977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11891039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8887;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11891180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11891197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5348;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11891200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11891354 . CGTG C 81 PASS INDEL;BAVGPOST=0.997;BRSQ=0.508;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6453;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11891490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4152;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11891593 rs72009862 C CA 502 PASS INDEL;BAVGPOST=0.763;BRSQ=0.200;LDAF=0.2315;AVGPOST=0.7187;RSQ=0.3354;ERATE=0.0291;THETA=0.0002;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 11891630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.936;LDAF=0.1313;AVGPOST=0.9657;RSQ=0.8894;ERATE=0.0072;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 11891648 . CCCAT C 143 PASS INDEL;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6893;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11891782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11891874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11891957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8088;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11891968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2370;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0004;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 11892023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7422;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11892071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9141;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11892231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5773;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11892241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0019;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11892448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3032;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 11892533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0159;AVGPOST=0.9983;RSQ=0.9575;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11892569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11892698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0321;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 11892976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11893008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8382;ERATE=0.0002;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11893130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1951;AVGPOST=0.9917;RSQ=0.9792;ERATE=0.0008;THETA=0.0020;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 11893281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1202;AVGPOST=0.9932;RSQ=0.9737;ERATE=0.0007;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 11893338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11893410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11893441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11893453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5567;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11893458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9442;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11893578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5600;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11893622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.8045;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11893924 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3684;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11893974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11894087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0096;AVGPOST=0.9983;RSQ=0.9352;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11894159 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9833;ERATE=0.0002;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11894237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11894285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1071;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11894300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1207;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 11894327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1061;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 11894397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11894398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11894428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11894451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11894458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1418;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 11894490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11894491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11894494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11894522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11894530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11894543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11894590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11894610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11894611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0001;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11894614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1957;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 11894618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11894665 rs112623544 TCAC T 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6575;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11894716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1083;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 11894731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.909;LDAF=0.9649;AVGPOST=0.9942;RSQ=0.9357;ERATE=0.0005;THETA=0.0001;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 11894791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11894808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0002;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11894812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11894819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11894950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9744;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11894975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9984;RSQ=0.9584;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11894989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9739;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11895254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8190;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11895341 . GC G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4134;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11895431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11895457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11895485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11895502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0177;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0002;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11895617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11895618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11895626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0010;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11895724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11895725 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11895743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11895791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11895807 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0002;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11896051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6885;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11896059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11896177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1072;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0001;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11896351 . ATTTTATC A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5944;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11896434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5158;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11896439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5754;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11896440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11896589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11896664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0112;AVGPOST=0.9987;RSQ=0.9537;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11896682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6475;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 11896709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11896770 . CT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11896944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1292;AVGPOST=0.9977;RSQ=0.9938;ERATE=0.0003;THETA=0.0001;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 11896948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11896968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11896991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1131;AVGPOST=0.9962;RSQ=0.9864;ERATE=0.0005;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 11897007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2112;AVGPOST=0.9969;RSQ=0.9916;ERATE=0.0007;THETA=0.0005;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 11897086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11897217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8693;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11897253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11897290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11897418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11897431 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9624;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11897495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11897591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11897680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11897766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11897788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11897891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0045;AVGPOST=0.9941;RSQ=0.5558;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11897962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6607;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11898255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0192;AVGPOST=0.9962;RSQ=0.9105;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11898270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9243;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11898534 . G GT 114 PASS INDEL;BAVGPOST=0.982;BRSQ=0.515;LDAF=0.0404;AVGPOST=0.9502;RSQ=0.4831;ERATE=0.0113;THETA=0.0001;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11898545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11898586 . CTGT C 2581 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11898641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6629;AVGPOST=0.9948;RSQ=0.9913;ERATE=0.0006;THETA=0.0005;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 11898655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8567;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11898679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8550;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11898698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1962;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 11898864 . TATTAC T 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5327;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11898882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1327;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 11898939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9536;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11899032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9711;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11899269 . GT G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6615;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11899272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3048;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 11899328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11899398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2792;AVGPOST=0.9953;RSQ=0.9907;ERATE=0.0013;THETA=0.0004;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 11899433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11899494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9795;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11899575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11899647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11899690 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11899698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11899978 . G GTT 116 PASS INDEL;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5801;ERATE=0.0008;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11900012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0643;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0001;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 11900023 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3600;ERATE=0.0008;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11900024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0123;AVGPOST=0.9983;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11900091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11900213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8101;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11900223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9226;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11900252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11900333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11900362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11900425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11900546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9755;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11900550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0105;AVGPOST=0.9980;RSQ=0.9150;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11900638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11900650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0296;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11900796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11900873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9159;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11900884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4422;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 11900990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2399;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 11901165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11901168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7446;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11901176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11901203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9279;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11901244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11901280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11901404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0848;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 11901415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0156;AVGPOST=0.9962;RSQ=0.9038;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11901576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6527;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11901601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11901652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11901666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0351;AVGPOST=0.9953;RSQ=0.9426;ERATE=0.0008;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11901777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0749;AVGPOST=0.9973;RSQ=0.9864;ERATE=0.0005;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11901810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9982;RSQ=0.9122;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11901837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0313;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11901888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.686;LDAF=0.0322;AVGPOST=0.9733;RSQ=0.6919;ERATE=0.0008;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 11901969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7945;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11902057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11902167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3959;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0006;THETA=0.0003;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 11902208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3640;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0008;THETA=0.0003;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 11902240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11902315 . T TA 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11902363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11902402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2798;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 11902439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11902444 . GTATC G 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4902;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11902468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0312;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11902469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7702;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11902518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11902778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4340;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0003;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 11902864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11902992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1046;AVGPOST=0.9947;RSQ=0.9805;ERATE=0.0009;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11903113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5673;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0005;THETA=0.0020;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 11903122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11903169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0426;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11903187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0967;AVGPOST=0.9977;RSQ=0.9925;ERATE=0.0005;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 11903556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11903565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3415;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0007;THETA=0.0003;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 11903587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7422;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11903608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7289;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11903620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8747;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11903689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11903704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1205;AVGPOST=0.9940;RSQ=0.9794;ERATE=0.0004;THETA=0.0001;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 11903775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4921;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11903898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.9004;ERATE=0.0003;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11903909 rs60350976 TA T 64 PASS INDEL;BAVGPOST=0.883;BRSQ=0.263;LDAF=0.0766;AVGPOST=0.9112;RSQ=0.5223;ERATE=0.0014;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 11904153 rs60350976 ATT A 5486 PASS INDEL;BAVGPOST=0.830;BRSQ=0.661;LDAF=0.2878;AVGPOST=0.8171;RSQ=0.6524;ERATE=0.0249;THETA=0.0001;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 11904154 . G GTA 71 PASS INDEL;BAVGPOST=0.990;BRSQ=0.476;LDAF=0.0207;AVGPOST=0.9752;RSQ=0.5361;ERATE=0.0031;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11904178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6541;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11904179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.589;LDAF=0.0062;AVGPOST=0.9946;RSQ=0.6308;ERATE=0.0010;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11904266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9162;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11904301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11904324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9697;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11904340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11904471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1786;AVGPOST=0.9978;RSQ=0.9941;ERATE=0.0003;THETA=0.0010;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 11904517 . C CA 432 PASS INDEL;BAVGPOST=0.986;BRSQ=0.643;LDAF=0.0257;AVGPOST=0.9753;RSQ=0.6159;ERATE=0.0095;THETA=0.0021;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11904666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11904723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0159;AVGPOST=0.9985;RSQ=0.9599;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11904748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11904771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11904838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11904918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11905019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3627;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0013;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 11905052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11905179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11905323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9517;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11905415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11905424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7543;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11905434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0552;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11905445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11905446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11905592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9718;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11905597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5299;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11905668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11905690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0555;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11905776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11905846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8606;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11906083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11906142 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0718;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 11906197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8241;ERATE=0.0004;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11906274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11906397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0118;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11906461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11906476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11906581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11906582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11906752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11906755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6900;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11906842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8729;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11906843 . CCT C 24 PASS INDEL;BAVGPOST=0.994;BRSQ=0.640;LDAF=0.0105;AVGPOST=0.9880;RSQ=0.5552;ERATE=0.0046;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11906849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9294;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11907081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 11907090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3638;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 11907131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11907209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907332 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8321;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11907680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9609;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11907691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11907989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9106;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11907991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11908076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11908092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3633;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0006;THETA=0.0002;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 11908278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11908376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9589;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11908442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0556;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0006;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 11908478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11908507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7444;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11908569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11908596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7350;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11908647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1673;AVGPOST=0.9957;RSQ=0.9895;ERATE=0.0006;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 11908704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11908885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7836;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11909036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.8950;ERATE=0.0006;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11909130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0091;AVGPOST=0.9972;RSQ=0.8955;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11909132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3635;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0010;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 11909180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9462;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11909275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0148;AVGPOST=0.9971;RSQ=0.9256;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11909280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0314;AVGPOST=0.9975;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11909412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7957;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11909445 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5967;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11909559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8297;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11909739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0404;AVGPOST=0.9983;RSQ=0.9803;ERATE=0.0007;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11909832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4649;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11909852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2692;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 11909860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6634;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11909892 . T TG 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11909995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6597;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11910188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11910197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11910239 . C CTTGT 710 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9466;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11910242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9520;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11910277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7822;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11910278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11910295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.8410;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11910308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0674;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11910407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9337;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11910482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.6676;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11910488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5422;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11910537 . GTTGT G 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11910624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11910649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11910679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9706;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11910709 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11910729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11910764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7825;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11910792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5386;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11910872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0059;AVGPOST=0.9954;RSQ=0.6841;ERATE=0.0016;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11910921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0490;AVGPOST=0.9958;RSQ=0.9642;ERATE=0.0005;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11911075 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8952;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11911076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11911221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0662;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 11911279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11911388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0095;AVGPOST=0.9951;RSQ=0.8075;ERATE=0.0007;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11911437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0148;AVGPOST=0.9922;RSQ=0.7848;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11911438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.967;LDAF=0.1176;AVGPOST=0.9823;RSQ=0.9408;ERATE=0.0007;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 11911673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0047;AVGPOST=0.9971;RSQ=0.7288;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11911721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0689;AVGPOST=0.9963;RSQ=0.9798;ERATE=0.0005;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 11911761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11911992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11912048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0010;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11912143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7814;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11912230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11912261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11912274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9615;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11912375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11912380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5858;AVGPOST=0.9953;RSQ=0.9930;ERATE=0.0007;THETA=0.0003;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 11912442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1242;AVGPOST=0.9975;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 11912451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0415;AVGPOST=0.9989;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11912454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7626;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11912477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8708;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11912514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0681;AVGPOST=0.9982;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11912533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5181;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11912574 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7545;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11912606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9706;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11912645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0731;AVGPOST=0.9989;RSQ=0.9939;ERATE=0.0004;THETA=0.0009;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 11912733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8300;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11912874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0120;AVGPOST=0.9970;RSQ=0.9014;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11912875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9461;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11913052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9980;RSQ=0.1974;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11913081 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11913225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11913241 . A AGTC 1096 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9478;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11913281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11913288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0128;AVGPOST=0.9967;RSQ=0.9039;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11913357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9276;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11913366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11913372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11913428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11913431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8471;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11913436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11913500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0675;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11913524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11913529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9324;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11913531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7976;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11913558 . ATT A 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6804;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11913614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8261;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11913770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0729;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 11913816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11913823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7955;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11913862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11913874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11914009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11914121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0674;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11914160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2662;AVGPOST=0.9942;RSQ=0.9877;ERATE=0.0005;THETA=0.0008;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 11914205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6866;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11914215 . T TAG 229 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9632;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11914215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0109;AVGPOST=0.9975;RSQ=0.9207;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11914259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11914270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9332;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11914315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6871;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11914323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6766;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11914375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11914426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0195;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11914463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5557;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11914464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2993;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 11914515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0501;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 11914550 . A AG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11914775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.807;LDAF=0.0119;AVGPOST=0.9956;RSQ=0.8576;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11914800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11915011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0220;AVGPOST=0.9961;RSQ=0.9273;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11915139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0423;AVGPOST=0.9986;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 11915140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11915224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7792;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 11915304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0256;AVGPOST=0.9987;RSQ=0.9812;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11915333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1164;AVGPOST=0.9981;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 11915376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2931;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 11915391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2939;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0005;THETA=0.0002;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 11915465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11915508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6929;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11915547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 11915562 rs34246935 C CA 26584 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2925;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 11915585 rs66798066 T TG 30089 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2940;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 11915587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11915655 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2992;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 11915685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.7848;AVGPOST=0.9900;RSQ=0.9796;ERATE=0.0005;THETA=0.0008;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 11915704 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.782;LDAF=0.0848;AVGPOST=0.9451;RSQ=0.7696;ERATE=0.0154;THETA=0.0017;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 11915705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11915733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4694;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11915760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11915810 . A AGG 2096 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0261;AVGPOST=0.9988;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11915971 . G GGA 7207 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0262;AVGPOST=0.9985;RSQ=0.9779;ERATE=0.0004;THETA=0.0017;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 11915972 . A AT 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9334;ERATE=0.0003;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11916066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6382;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11916166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8588;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11916328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11916421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8868;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11916499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7040;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11916584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9706;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11916600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11916652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11916655 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11916771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11917048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4885;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0115;AVGPOST=0.9936;RSQ=0.8053;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11917087 . AG A 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6062;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11917097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.1624;AVGPOST=0.9963;RSQ=0.9902;ERATE=0.0005;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 11917098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917293 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11917340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9498;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11917430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1651;AVGPOST=0.9976;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 11917580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9450;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11917607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11917635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6136;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11917660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9724;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11917675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11917677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11917763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0075;AVGPOST=0.9976;RSQ=0.8928;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11917764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0208;AVGPOST=0.9976;RSQ=0.9579;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11917778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3080;AVGPOST=0.9904;RSQ=0.9825;ERATE=0.0009;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 11917887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8679;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11917953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.857;LDAF=0.0396;AVGPOST=0.9768;RSQ=0.7832;ERATE=0.0034;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 11917957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4555;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11918019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9232;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11918022 . TG T 1655 PASS INDEL;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11918139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8875;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11918194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11918474 . G GT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11918566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11918693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11918746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6007;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11918813 . AC A 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11918818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8509;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11918903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11918963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11919007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11919082 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11919115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6796;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3697;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0009;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 11919255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0265;AVGPOST=0.9990;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11919257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11919300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11919355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6431;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6337;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11919524 . C CA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11919537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1567;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 11919564 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11919775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0324;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 11919857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11920014 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4937;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11920079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11920190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11920481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11920509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11920568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9578;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11920659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2916;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 11920951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7272;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11921014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11921021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11921030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11921197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11921213 . CAG C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6445;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11921262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11921269 . T TGG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5173;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11921273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8564;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11921394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0268;AVGPOST=0.9986;RSQ=0.9745;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11921455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3769;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0010;THETA=0.0004;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 11921471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.876;LDAF=0.0435;AVGPOST=0.9887;RSQ=0.8962;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11921509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11921555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7687;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11921568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1569;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 11921580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2917;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 11921687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11921871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9734;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11921893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8920;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11922020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0155;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11922036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6133;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11922076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1558;AVGPOST=0.9975;RSQ=0.9931;ERATE=0.0004;THETA=0.0002;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 11922148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1353;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 11922414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11922425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.806;LDAF=0.0169;AVGPOST=0.9906;RSQ=0.7932;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11922426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7710;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11922444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11922464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4699;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11922625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11922795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8480;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11922819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0613;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11922846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.5027;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11922930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8749;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11922967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9457;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11923082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8027;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11923086 . AT A 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4338;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11923197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11923236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7455;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11923245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9582;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11923406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11923464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3524;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 11923574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4505;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11923598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0197;AVGPOST=0.9959;RSQ=0.9280;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11923626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0206;AVGPOST=0.9965;RSQ=0.9376;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11923627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1566;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 11923671 . C CA 222 PASS INDEL;BAVGPOST=0.958;BRSQ=0.480;LDAF=0.0469;AVGPOST=0.9409;RSQ=0.4702;ERATE=0.0105;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11923699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.868;LDAF=0.6880;AVGPOST=0.9061;RSQ=0.8252;ERATE=0.0478;THETA=0.0007;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 11923709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0086;AVGPOST=0.9936;RSQ=0.6933;ERATE=0.0027;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11923710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9612;ERATE=0.0004;THETA=0.0033;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11923734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8275;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11923761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11923811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3749;AVGPOST=0.9939;RSQ=0.9909;ERATE=0.0027;THETA=0.0015;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 11923843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5586;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11923952 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5798;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11923961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11924242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0463;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 11924422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1568;AVGPOST=0.9941;RSQ=0.9832;ERATE=0.0013;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 11924480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5870;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11924481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11924644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0214;AVGPOST=0.9973;RSQ=0.9503;ERATE=0.0006;THETA=0.0027;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11924695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11924763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.950;LDAF=0.0759;AVGPOST=0.9915;RSQ=0.9557;ERATE=0.0004;THETA=0.0030;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11924910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11924937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11924977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9606;ERATE=0.0003;THETA=0.0097;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11925084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0168;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11925276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11925313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8589;ERATE=0.0005;THETA=0.0071;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11925371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.897;LDAF=0.5099;AVGPOST=0.9323;RSQ=0.9014;ERATE=0.0020;THETA=0.0060;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 11925372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11925381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.777;LDAF=0.0159;AVGPOST=0.9913;RSQ=0.7933;ERATE=0.0008;THETA=0.0162;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11925388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0003;THETA=0.0153;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11925472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.4094;ERATE=0.0005;THETA=0.0087;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11925511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11925602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11925695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7634;ERATE=0.0009;THETA=0.0091;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11925769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4148;ERATE=0.0003;THETA=0.0195;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11925974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9185;ERATE=0.0003;THETA=0.0114;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11926025 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0075;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11926053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11926367 . C CACTG 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5793;ERATE=0.0006;THETA=0.0055;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11926399 . ATT A 245 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0242;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11926496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.939;LDAF=0.0427;AVGPOST=0.9928;RSQ=0.9358;ERATE=0.0016;THETA=0.0219;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11926514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7873;ERATE=0.0003;THETA=0.0147;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11926549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0246;AVGPOST=0.9962;RSQ=0.9416;ERATE=0.0004;THETA=0.0121;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 11926561 . T TGCAG 1717 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9007;ERATE=0.0003;THETA=0.0098;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11926563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.929;LDAF=0.2526;AVGPOST=0.9676;RSQ=0.9353;ERATE=0.0090;THETA=0.0101;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 11926697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11926795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.920;LDAF=0.0340;AVGPOST=0.9949;RSQ=0.9425;ERATE=0.0006;THETA=0.0222;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11926821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8702;ERATE=0.0003;THETA=0.0117;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11926853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0004;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11926958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.946;LDAF=0.1069;AVGPOST=0.9878;RSQ=0.9521;ERATE=0.0006;THETA=0.0048;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 11927073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11927117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11927213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.954;LDAF=0.2954;AVGPOST=0.9686;RSQ=0.9461;ERATE=0.0074;THETA=0.0131;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 11927261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0004;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11927304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8329;ERATE=0.0004;THETA=0.0125;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11927391 . C CT 543 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9013;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11927443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.937;LDAF=0.4115;AVGPOST=0.9496;RSQ=0.9318;ERATE=0.0058;THETA=0.0160;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 11927479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0128;AVGPOST=0.9926;RSQ=0.7911;ERATE=0.0025;THETA=0.0090;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11927497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0127;AVGPOST=0.9970;RSQ=0.9194;ERATE=0.0003;THETA=0.0136;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11927578 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0342;AVGPOST=0.9974;RSQ=0.9666;ERATE=0.0005;THETA=0.0010;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 11927586 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0339;AVGPOST=0.9979;RSQ=0.9757;ERATE=0.0003;THETA=0.0031;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11927675 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7475;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11927833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5853;ERATE=0.0010;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11927902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.2673;AVGPOST=0.9871;RSQ=0.9764;ERATE=0.0005;THETA=0.0019;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 11927960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7067;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11927969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0739;AVGPOST=0.9941;RSQ=0.9681;ERATE=0.0006;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 11928002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0056;AVGPOST=0.9952;RSQ=0.6477;ERATE=0.0007;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11928118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7551;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11928227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0725;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 11928325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7320;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11928379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11928393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11928462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11928566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11928632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11928635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1428;AVGPOST=0.9971;RSQ=0.9917;ERATE=0.0003;THETA=0.0018;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 11928683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11928716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3488;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0004;THETA=0.0006;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 11928739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1537;AVGPOST=0.9980;RSQ=0.9936;ERATE=0.0003;THETA=0.0030;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 11928867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6023;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11928977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11929005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6796;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11929103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9533;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11929104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11929138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3507;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0004;THETA=0.0022;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 11929172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11929265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11929426 rs71758816 G GT 37188 PASS INDEL;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.4514;AVGPOST=0.9523;RSQ=0.9301;ERATE=0.0115;THETA=0.0024;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 11929473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11929546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11929553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6827;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11929599 . A AATTTTTTGT 5643 PASS INDEL;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0386;AVGPOST=0.9988;RSQ=0.9872;ERATE=0.0006;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11929650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.869;LDAF=0.0358;AVGPOST=0.9947;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 11929667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4079;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11929684 . CAGTT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6968;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11929872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4481;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11930121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5557;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11930123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11930356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.862;LDAF=0.0513;AVGPOST=0.9756;RSQ=0.8316;ERATE=0.0040;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11930455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.922;LDAF=0.3919;AVGPOST=0.9433;RSQ=0.9093;ERATE=0.0105;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 11930531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4464;AVGPOST=0.9909;RSQ=0.9866;ERATE=0.0010;THETA=0.0005;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 11930731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.2957;AVGPOST=0.9947;RSQ=0.9893;ERATE=0.0007;THETA=0.0005;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 11930751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2566;AVGPOST=0.9939;RSQ=0.9877;ERATE=0.0005;THETA=0.0023;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 11930802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0096;AVGPOST=0.9965;RSQ=0.8531;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11930871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0077;AVGPOST=0.9947;RSQ=0.7328;ERATE=0.0010;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11931270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9985;RSQ=0.9838;ERATE=0.0005;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11931469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0339;AVGPOST=0.9989;RSQ=0.9888;ERATE=0.0003;THETA=0.0012;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 11931503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8093;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11931564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1125;AVGPOST=0.9977;RSQ=0.9896;ERATE=0.0005;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 11931578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.340;LDAF=0.0097;AVGPOST=0.9884;RSQ=0.5459;ERATE=0.0013;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11931742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.479;LDAF=0.0097;AVGPOST=0.9928;RSQ=0.6687;ERATE=0.0012;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11931762 . AAATT A 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5605;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11931996 rs72454415 TTAAAA T 4670 PASS INDEL;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0420;AVGPOST=0.9947;RSQ=0.9512;ERATE=0.0010;THETA=0.0023;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11932027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0386;AVGPOST=0.9987;RSQ=0.9858;ERATE=0.0005;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 11932133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0211;AVGPOST=0.9990;RSQ=0.9804;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11932174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4448;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11932190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11932291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11932310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11932391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7238;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11932415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11932694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11932729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11932787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.5130;AVGPOST=0.9813;RSQ=0.9726;ERATE=0.0006;THETA=0.0010;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 11932876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.750;LDAF=0.0102;AVGPOST=0.9942;RSQ=0.7563;ERATE=0.0007;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11932892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8635;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11933084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7432;ERATE=0.0005;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11933172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11933336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7510;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11933379 . G GT 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4603;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11933545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11933755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9615;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11933858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4472;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0005;THETA=0.0016;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 11933955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6949;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11933979 . T TA 51 PASS INDEL;BAVGPOST=0.997;BRSQ=0.584;LDAF=0.0081;AVGPOST=0.9943;RSQ=0.7408;ERATE=0.0014;THETA=0.0039;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11934321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.894;LDAF=0.4797;AVGPOST=0.9179;RSQ=0.8900;ERATE=0.0089;THETA=0.0022;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 11934566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0026;AVGPOST=0.9964;RSQ=0.4092;ERATE=0.0006;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11934574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0388;AVGPOST=0.9971;RSQ=0.9724;ERATE=0.0006;THETA=0.0044;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 11934576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0068;AVGPOST=0.9899;RSQ=0.4312;ERATE=0.0018;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11934578 . TC T 651 PASS INDEL;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.8907;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11934762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8328;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11934965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11934969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6810;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11935001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3917;AVGPOST=0.9965;RSQ=0.9953;ERATE=0.0006;THETA=0.0006;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 11935016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8548;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11935048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11935066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0389;AVGPOST=0.9985;RSQ=0.9854;ERATE=0.0004;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 11935072 rs72217394 TTTAA T 4871 PASS INDEL;BAVGPOST=0.983;BRSQ=0.871;LDAF=0.0662;AVGPOST=0.9696;RSQ=0.8156;ERATE=0.0042;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11935120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.904;LDAF=0.1055;AVGPOST=0.9721;RSQ=0.8893;ERATE=0.0069;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 11935131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0042;AVGPOST=0.9962;RSQ=0.6061;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11935135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3938;AVGPOST=0.9945;RSQ=0.9928;ERATE=0.0005;THETA=0.0006;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 11935199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5125;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11935221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.4957;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11935230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.936;LDAF=0.5903;AVGPOST=0.9781;RSQ=0.9683;ERATE=0.0008;THETA=0.0003;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 11935369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.937;LDAF=0.4252;AVGPOST=0.9726;RSQ=0.9639;ERATE=0.0008;THETA=0.0006;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 11935373 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6056;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0007;THETA=0.0039;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 11935449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11935615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4685;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11935638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.2913;ERATE=0.0008;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11935763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0397;AVGPOST=0.9981;RSQ=0.9814;ERATE=0.0006;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11935876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11935949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6000;AVGPOST=0.9925;RSQ=0.9884;ERATE=0.0054;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 11936012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11936033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0017;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11936054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4694;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 11936098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11936160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11936204 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0009;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11936239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11936392 . GT G 2694 PASS INDEL;BAVGPOST=0.975;BRSQ=0.796;LDAF=0.0707;AVGPOST=0.9521;RSQ=0.7257;ERATE=0.0129;THETA=0.0002;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 11936466 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5676;AVGPOST=0.9877;RSQ=0.9824;ERATE=0.0028;THETA=0.0021;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 11936467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0116;AVGPOST=0.9986;RSQ=0.9512;ERATE=0.0004;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11936475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8593;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11936487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11936546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.927;LDAF=0.0277;AVGPOST=0.9986;RSQ=0.9795;ERATE=0.0005;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11936673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.816;LDAF=0.0250;AVGPOST=0.9822;RSQ=0.7105;ERATE=0.0049;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11936738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11936777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11936878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6004;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 11936883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11936927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11936928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11936956 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11937039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11937047 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11937088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0437;AVGPOST=0.9983;RSQ=0.9842;ERATE=0.0007;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11937113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11937117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0610;AVGPOST=0.9983;RSQ=0.9892;ERATE=0.0003;THETA=0.0025;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11937179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0150;AVGPOST=0.9994;RSQ=0.9851;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11937267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0789;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 11937284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 11937286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11937292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11937310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0379;AVGPOST=0.9981;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11937330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0263;AVGPOST=0.9980;RSQ=0.9696;ERATE=0.0004;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 11937422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6960;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11937427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11937454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11937642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0471;AVGPOST=0.9991;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 11937649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9230;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11937662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11937725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5784;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 11937890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11937904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11937957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0960;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 11937971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8724;ERATE=0.0022;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11938046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0343;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 11938075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7990;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11938189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11938193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11938247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 11938359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3882;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0006;THETA=0.0012;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 11938370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11938410 rs34129234 CCTT C 44323 PASS INDEL;BAVGPOST=0.978;BRSQ=0.963;LDAF=0.3764;AVGPOST=0.9854;RSQ=0.9801;ERATE=0.0025;THETA=0.0005;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 11938435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4616;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11938497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1446;AVGPOST=0.9963;RSQ=0.9883;ERATE=0.0005;THETA=0.0015;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 11938506 . A AG 10563 PASS INDEL;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1439;AVGPOST=0.9943;RSQ=0.9821;ERATE=0.0007;THETA=0.0007;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 11938509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11938510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8907;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11938533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9436;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11938540 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7225;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11938602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8826;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11938626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.6841;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11938662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1440;AVGPOST=0.9982;RSQ=0.9935;ERATE=0.0005;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 11938747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7789;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11938796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11938911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11938916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1382;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 11939056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11939246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11939254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11939294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11939299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11939348 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11939397 . TC T 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11939437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11939440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9994;RSQ=0.9848;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11939488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3832;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 11939512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11939546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4888;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0010;THETA=0.0005;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 11939556 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7569;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11939574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0374;AVGPOST=0.9967;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11939616 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0372;AVGPOST=0.9967;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11939617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0408;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 11939664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0074;AVGPOST=0.9976;RSQ=0.8715;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11939759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9449;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11939852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0294;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11939973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6411;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11939980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11940107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5072;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 11940108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8667;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11940111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8795;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 11940141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5492;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0010;THETA=0.0023;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 11940298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8379;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11940329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11940413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5189;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0005;THETA=0.0020;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 11940498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5196;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0010;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 11940516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5186;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 11940559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11940583 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5193;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 11940611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4567;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0364;AVGPOST=0.9954;RSQ=0.9489;ERATE=0.0004;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 11940658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8344;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11940692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5195;AVGPOST=0.9972;RSQ=0.9963;ERATE=0.0005;THETA=0.0027;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 11940702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5198;AVGPOST=0.9975;RSQ=0.9966;ERATE=0.0003;THETA=0.0017;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 11940759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5080;AVGPOST=0.9955;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 11940787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5199;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0003;THETA=0.0036;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 11940791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11940796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8413;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11940891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6261;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11940892 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11940899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0086;AVGPOST=0.9975;RSQ=0.8699;ERATE=0.0004;THETA=0.0049;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11941164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4718;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11941192 . TAGAA T 409 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6218;ERATE=0.0006;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11941204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5040;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 11941292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11941304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5054;AVGPOST=0.9966;RSQ=0.9949;ERATE=0.0015;THETA=0.0018;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 11941374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.5019;AVGPOST=0.9953;RSQ=0.9935;ERATE=0.0004;THETA=0.0006;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 11941486 . TA T 5479 PASS INDEL;BAVGPOST=0.779;BRSQ=0.596;LDAF=0.3204;AVGPOST=0.8051;RSQ=0.7035;ERATE=0.0093;THETA=0.0011;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 11941503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.950;LDAF=0.4913;AVGPOST=0.9751;RSQ=0.9678;ERATE=0.0017;THETA=0.0050;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 11941504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6114;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11941573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4756;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11941765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11941786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9114;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11941851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.926;LDAF=0.4714;AVGPOST=0.9548;RSQ=0.9371;ERATE=0.0029;THETA=0.0004;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 11941922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.925;LDAF=0.4936;AVGPOST=0.9442;RSQ=0.9181;ERATE=0.0099;THETA=0.0007;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 11941926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.717;LDAF=0.0192;AVGPOST=0.9899;RSQ=0.7954;ERATE=0.0006;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11941950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.907;LDAF=0.5119;AVGPOST=0.9197;RSQ=0.8794;ERATE=0.0309;THETA=0.0003;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 11941958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5006;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 11942007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6236;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11942012 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4364;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6255;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11942144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6726;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11942177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6475;ERATE=0.0005;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11942178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11942219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7276;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11942264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6014;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0005;THETA=0.0009;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 11942318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6694;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5044;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0014;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 11942454 . T TCATA 4119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0152;AVGPOST=0.9913;RSQ=0.7775;ERATE=0.0006;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11942461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11942516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8443;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11942550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4808;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7269;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11942736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.900;LDAF=0.0288;AVGPOST=0.9935;RSQ=0.9108;ERATE=0.0006;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 11942878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5281;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 11942882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11942990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6581;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11943052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5282;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 11943075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6962;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11943115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11943120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5285;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 11943125 . GC G 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0064;AVGPOST=0.9904;RSQ=0.4082;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11943128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7597;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11943139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7597;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11943223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5282;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0028;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 11943248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11943302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6003;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11943344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5286;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0005;THETA=0.0007;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 11943377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6656;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11943433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0478;AVGPOST=0.9987;RSQ=0.9891;ERATE=0.0003;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 11943587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2088;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0004;THETA=0.0012;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 11943669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11943685 . G GC 27658 PASS INDEL;BAVGPOST=0.962;BRSQ=0.946;LDAF=0.5087;AVGPOST=0.9674;RSQ=0.9618;ERATE=0.0005;THETA=0.0007;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 11943849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.955;LDAF=0.4924;AVGPOST=0.9582;RSQ=0.9480;ERATE=0.0056;THETA=0.0003;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 11943850 . TA T 16685 PASS INDEL;BAVGPOST=0.961;BRSQ=0.945;LDAF=0.5058;AVGPOST=0.9636;RSQ=0.9575;ERATE=0.0006;THETA=0.0010;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 11943855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.953;LDAF=0.5032;AVGPOST=0.9649;RSQ=0.9584;ERATE=0.0004;THETA=0.0026;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 11943856 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6261;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0004;THETA=0.0012;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 11943937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4067;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11943996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0223;AVGPOST=0.9988;RSQ=0.9793;ERATE=0.0003;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11944024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5272;AVGPOST=0.9939;RSQ=0.9915;ERATE=0.0004;THETA=0.0008;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 11944137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.953;LDAF=0.5011;AVGPOST=0.9739;RSQ=0.9663;ERATE=0.0004;THETA=0.0008;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 11944160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.954;LDAF=0.4752;AVGPOST=0.9720;RSQ=0.9650;ERATE=0.0003;THETA=0.0006;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 11944161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11944169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.815;LDAF=0.0219;AVGPOST=0.9921;RSQ=0.8488;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11944215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8916;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11944269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8977;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11944311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8352;AVGPOST=0.9964;RSQ=0.9901;ERATE=0.0005;THETA=0.0004;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 11944331 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9455;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11944361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11944394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7394;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11944395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8591;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11944401 . A AC 11280 PASS INDEL;BAVGPOST=0.941;BRSQ=0.896;LDAF=0.4832;AVGPOST=0.9352;RSQ=0.9097;ERATE=0.0052;THETA=0.0009;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 11944419 rs11422004 C CA 57549 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5274;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0006;THETA=0.0011;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 11944420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9327;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11944510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5271;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0006;THETA=0.0014;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 11944589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5364;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0226;AVGPOST=0.9988;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 11944788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.438;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3098;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944833 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944873 . GT G 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6194;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11944884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5155;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11944911 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9275;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11944917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.6668;AVGPOST=0.9964;RSQ=0.9929;ERATE=0.0006;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 11944949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1200;AVGPOST=0.9962;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 11945021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0618;AVGPOST=0.9987;RSQ=0.9904;ERATE=0.0003;THETA=0.0015;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11945111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5259;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11945141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4331;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11945181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7479;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11945212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0319;AVGPOST=0.9981;RSQ=0.9755;ERATE=0.0006;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 11945304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.705;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7142;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11945337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0123;AVGPOST=0.9942;RSQ=0.8015;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11945347 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2473;AVGPOST=0.9950;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 11945401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2462;AVGPOST=0.9944;RSQ=0.9880;ERATE=0.0005;THETA=0.0069;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 11945504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8796;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11945619 . CA C 4624 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0431;AVGPOST=0.9960;RSQ=0.9647;ERATE=0.0004;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 11946069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0149;AVGPOST=0.9953;RSQ=0.8754;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11946155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0092;AVGPOST=0.9988;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11946199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11946308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0254;AVGPOST=0.9979;RSQ=0.9645;ERATE=0.0003;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 11946438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11946451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.805;LDAF=0.0131;AVGPOST=0.9936;RSQ=0.8098;ERATE=0.0006;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11946544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7290;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11946592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11946763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8461;ERATE=0.0004;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11946789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0150;AVGPOST=0.9984;RSQ=0.9550;ERATE=0.0003;THETA=0.0023;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11946796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0636;AVGPOST=0.9977;RSQ=0.9847;ERATE=0.0005;THETA=0.0019;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 11946848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9554;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11947030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11947058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0643;AVGPOST=0.9976;RSQ=0.9845;ERATE=0.0004;THETA=0.0035;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 11947216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0005;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11947328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5447;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11947341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11947474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7359;ERATE=0.0003;THETA=0.0070;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11947475 . AAAG A 211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5236;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11947500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.6722;AVGPOST=0.9793;RSQ=0.9648;ERATE=0.0019;THETA=0.0016;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 11947551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11947572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11947592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.6672;AVGPOST=0.9838;RSQ=0.9725;ERATE=0.0009;THETA=0.0076;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 11947607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0623;AVGPOST=0.9960;RSQ=0.9749;ERATE=0.0004;THETA=0.0044;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 11947671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0133;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11947686 . A ACT 6021 PASS INDEL;BAVGPOST=0.954;BRSQ=0.800;LDAF=0.1142;AVGPOST=0.9554;RSQ=0.8275;ERATE=0.0028;THETA=0.0050;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 11947696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.876;LDAF=0.0613;AVGPOST=0.9810;RSQ=0.8804;ERATE=0.0021;THETA=0.0039;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11947699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1153;AVGPOST=0.9919;RSQ=0.9701;ERATE=0.0008;THETA=0.0184;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 11947762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0190;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11947828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0250;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11947854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0201;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11947927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0061;AVGPOST=0.9975;RSQ=0.8289;ERATE=0.0003;THETA=0.0148;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11947929 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3270;ERATE=0.0005;THETA=0.0218;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948015 . ATAGT A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3943;ERATE=0.0006;THETA=0.0204;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7447;ERATE=0.0004;THETA=0.0209;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11948172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0125;AVGPOST=0.9958;RSQ=0.8671;ERATE=0.0005;THETA=0.0144;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11948341 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0161;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0005;THETA=0.0232;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11948387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.856;LDAF=0.8552;AVGPOST=0.9489;RSQ=0.8403;ERATE=0.0060;THETA=0.0509;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 11948415 . A AT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0207;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5160;ERATE=0.0003;THETA=0.0383;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948601 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8768;ERATE=0.0013;THETA=0.0174;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11948675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.819;LDAF=0.1952;AVGPOST=0.9319;RSQ=0.8511;ERATE=0.0188;THETA=0.0269;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 11948725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.833;LDAF=0.0245;AVGPOST=0.9882;RSQ=0.8187;ERATE=0.0005;THETA=0.0279;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11948735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5436;ERATE=0.0003;THETA=0.0544;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.797;LDAF=0.0609;AVGPOST=0.9739;RSQ=0.8106;ERATE=0.0015;THETA=0.0220;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 11948793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7305;ERATE=0.0005;THETA=0.0234;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11948958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0163;AVGPOST=0.9936;RSQ=0.8493;ERATE=0.0016;THETA=0.0391;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11948981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0202;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11948983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.913;LDAF=0.0241;AVGPOST=0.9922;RSQ=0.8843;ERATE=0.0009;THETA=0.0474;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 11948994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.764;LDAF=0.1955;AVGPOST=0.9120;RSQ=0.7984;ERATE=0.0271;THETA=0.0120;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 11949063 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.594;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7091;ERATE=0.0006;THETA=0.0139;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11949216 . T TG 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0037;AVGPOST=0.9959;RSQ=0.4833;ERATE=0.0007;THETA=0.0136;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11949223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6760;ERATE=0.0003;THETA=0.0165;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11949228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5765;ERATE=0.0004;THETA=0.0232;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11949230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.472;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6643;ERATE=0.0005;THETA=0.0141;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11949233 . TTCAC T 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5244;ERATE=0.0006;THETA=0.0148;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11949252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.908;LDAF=0.0236;AVGPOST=0.9920;RSQ=0.8653;ERATE=0.0005;THETA=0.0100;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11949293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.748;LDAF=0.7788;AVGPOST=0.8938;RSQ=0.7855;ERATE=0.0093;THETA=0.0178;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 11949296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0115;AVGPOST=0.9946;RSQ=0.8124;ERATE=0.0005;THETA=0.0219;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11949345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0210;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11949444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.945;LDAF=0.9416;AVGPOST=0.9877;RSQ=0.9270;ERATE=0.0003;THETA=0.0074;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 11949495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6051;ERATE=0.0004;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11949509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7049;ERATE=0.0003;THETA=0.0175;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11949513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.953;LDAF=0.9383;AVGPOST=0.9893;RSQ=0.9399;ERATE=0.0004;THETA=0.0176;AC=2054;AN=2184 GT:DS:GL:BD 0.94047618 1
1 11949540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0005;THETA=0.0173;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11949574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0055;AVGPOST=0.9963;RSQ=0.7137;ERATE=0.0005;THETA=0.0094;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11949606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.790;LDAF=0.0898;AVGPOST=0.9560;RSQ=0.7905;ERATE=0.0029;THETA=0.0206;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11949621 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8346;ERATE=0.0004;THETA=0.0087;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11949656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7538;ERATE=0.0004;THETA=0.0092;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11949695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6447;ERATE=0.0005;THETA=0.0114;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11949729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0329;AVGPOST=0.9961;RSQ=0.9514;ERATE=0.0003;THETA=0.0039;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 11949763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4579;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11949815 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6688;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11949877 . GACTC G 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11950006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.7845;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11950026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6463;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11950153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11950234 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11950277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0142;AVGPOST=0.9966;RSQ=0.8978;ERATE=0.0005;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11950331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11950385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8048;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 11950406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11950514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7518;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11950808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9566;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11951003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0223;AVGPOST=0.9975;RSQ=0.9581;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11951093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9782;ERATE=0.0004;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11951145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7562;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 11951259 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11951261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6598;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11951304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11951439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11951477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8045;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0006;THETA=0.0006;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 11951588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6563;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11951638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.477;LDAF=0.0181;AVGPOST=0.9787;RSQ=0.5495;ERATE=0.0060;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11951816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11951887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11952019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11952090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8395;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11952167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11952425 . C CT 108 PASS INDEL;BAVGPOST=0.995;BRSQ=0.418;LDAF=0.0069;AVGPOST=0.9893;RSQ=0.3679;ERATE=0.0036;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11952629 . T TA 19119 PASS INDEL;BAVGPOST=0.985;BRSQ=0.963;LDAF=0.8096;AVGPOST=0.9728;RSQ=0.9411;ERATE=0.0038;THETA=0.0008;AC=1773;AN=2184 GT:DS:GL:BD 0.81181318 1
1 11952634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11952740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11952858 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4905;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11952995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4765;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7559;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0019;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 11953045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8629;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11953089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7573;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0006;THETA=0.0006;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 11953199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0445;AVGPOST=0.9986;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 11953212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9398;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11953513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0123;AVGPOST=0.9979;RSQ=0.9245;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11953542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11953618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9464;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11953671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7291;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11953890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6564;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11954001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6702;AVGPOST=0.9931;RSQ=0.9895;ERATE=0.0008;THETA=0.0005;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 11954013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.6924;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11954046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8290;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11954117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11954167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8971;ERATE=0.0004;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11954182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8851;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11954297 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11954310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0074;AVGPOST=0.9961;RSQ=0.8052;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11954370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4343;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11954586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6976;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11954765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0078;AVGPOST=0.9987;RSQ=0.9364;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11954818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11954820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.512;LDAF=0.1976;AVGPOST=0.8374;RSQ=0.6228;ERATE=0.0184;THETA=0.0002;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 11955028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8069;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11955184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11955368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 11955400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0088;AVGPOST=0.9983;RSQ=0.9206;ERATE=0.0010;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11955407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6220;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11955572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4894;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 11955675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9665;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11955697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0565;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 11955719 . CAT C 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3885;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 11955822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11955836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11955850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7702;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11955940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4905;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0008;THETA=0.0004;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 11956022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9570;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11956116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0439;AVGPOST=0.9976;RSQ=0.9777;ERATE=0.0006;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11956151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0588;AVGPOST=0.9979;RSQ=0.9863;ERATE=0.0006;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 11956275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11956300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8268;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11956315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0043;AVGPOST=0.9934;RSQ=0.4522;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11956411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.639;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6467;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11956447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.954;LDAF=0.1092;AVGPOST=0.9787;RSQ=0.9262;ERATE=0.0029;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 11956594 . C CA 99 PASS INDEL;BAVGPOST=0.980;BRSQ=0.556;LDAF=0.0298;AVGPOST=0.9654;RSQ=0.5163;ERATE=0.0091;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 11956614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0420;AVGPOST=0.9971;RSQ=0.9729;ERATE=0.0008;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11956619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4378;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0007;THETA=0.0005;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 11956636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11956653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4380;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 11956721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11956740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11956902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11956903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8306;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11957025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 11957041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0524;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 11957064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11957088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11957212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9555;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11957233 . CT C 2693 PASS INDEL;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0217;AVGPOST=0.9947;RSQ=0.8966;ERATE=0.0006;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11957247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11957324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9314;ERATE=0.0006;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11957396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6347;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11957397 . GACT G 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6673;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11957400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11957446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11957447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9437;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11957448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11957516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9263;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11957522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11957566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11957644 . CTA C 2178 PASS INDEL;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0216;AVGPOST=0.9945;RSQ=0.8984;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11957687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7234;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11957698 . AAAAG A 91 PASS INDEL;BAVGPOST=0.992;BRSQ=0.189;LDAF=0.0202;AVGPOST=0.9777;RSQ=0.5033;ERATE=0.0015;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11957710 . AAG A 41 PASS INDEL;BAVGPOST=0.992;BRSQ=0.651;LDAF=0.0188;AVGPOST=0.9793;RSQ=0.5367;ERATE=0.0081;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11957716 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11957793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11957801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11958077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11958131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 11958147 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0526;AVGPOST=0.9954;RSQ=0.9679;ERATE=0.0006;THETA=0.0010;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 11958379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3579;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11958389 . CA C 6 PASS INDEL;BAVGPOST=0.997;BRSQ=0.391;LDAF=0.0058;AVGPOST=0.9940;RSQ=0.6356;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11958502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5672;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11958534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.2647;AVGPOST=0.9868;RSQ=0.9754;ERATE=0.0012;THETA=0.0004;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 11958539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0091;AVGPOST=0.9986;RSQ=0.9349;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11958732 . A ACT 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4165;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11958816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11958890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6718;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11958950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7863;AVGPOST=0.9889;RSQ=0.9755;ERATE=0.0004;THETA=0.0057;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 11958998 . TC T 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4284;ERATE=0.0008;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11959095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6446;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11959254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7702;ERATE=0.0004;THETA=0.0227;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11959256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.845;LDAF=0.9766;AVGPOST=0.9883;RSQ=0.8150;ERATE=0.0005;THETA=0.0009;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 11959442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0144;AVGPOST=0.9975;RSQ=0.9275;ERATE=0.0008;THETA=0.0085;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11959629 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9827;ERATE=0.0004;THETA=0.0018;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11959657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0004;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11959658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9979;RSQ=0.9354;ERATE=0.0004;THETA=0.0067;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 11959798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9743;ERATE=0.0003;THETA=0.0073;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11959801 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6277;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11959908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9366;ERATE=0.0006;THETA=0.0118;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11959919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0004;THETA=0.0178;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11959926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0414;AVGPOST=0.9964;RSQ=0.9701;ERATE=0.0013;THETA=0.0046;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 11960015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11960233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9994;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11960323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11960332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11960343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11960441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1492;AVGPOST=0.9975;RSQ=0.9922;ERATE=0.0003;THETA=0.0009;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 11960509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11960540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0057;AVGPOST=0.9954;RSQ=0.6805;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11960634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1295;AVGPOST=0.9972;RSQ=0.9898;ERATE=0.0006;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 11960737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0553;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11960807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11960963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6356;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11961027 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11961039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11961044 . AAAG A 1157 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0107;AVGPOST=0.9990;RSQ=0.9635;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11961056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0125;AVGPOST=0.9989;RSQ=0.9594;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11961075 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9741;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11961104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11961221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0557;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 11961554 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11961930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11962004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 11962018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11962058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 11962066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11962148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2084;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 11962151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11962202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 11962268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7344;AVGPOST=0.9969;RSQ=0.9938;ERATE=0.0005;THETA=0.0003;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 11962358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11962566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5640;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11962719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5944;AVGPOST=0.9931;RSQ=0.9895;ERATE=0.0017;THETA=0.0002;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 11962973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5168;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9660;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11963117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 11963143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4264;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4420;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0414;AVGPOST=0.9967;RSQ=0.9655;ERATE=0.0007;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11963203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0414;AVGPOST=0.9943;RSQ=0.9411;ERATE=0.0013;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 11963214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0112;AVGPOST=0.9947;RSQ=0.8241;ERATE=0.0007;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11963316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5832;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11963351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3648;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.1277;AVGPOST=0.9951;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 11963390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.936;LDAF=0.3526;AVGPOST=0.9874;RSQ=0.9788;ERATE=0.0012;THETA=0.0004;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 11963450 rs80265012 A AAGGG 198 PASS INDEL;BAVGPOST=0.958;BRSQ=0.283;LDAF=0.0569;AVGPOST=0.9119;RSQ=0.3561;ERATE=0.0087;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11963464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.648;LDAF=0.1718;AVGPOST=0.8762;RSQ=0.6505;ERATE=0.0229;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 11963468 . GGACA G 1289 PASS INDEL;BAVGPOST=0.904;BRSQ=0.356;LDAF=0.1556;AVGPOST=0.8005;RSQ=0.3733;ERATE=0.0353;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 11963483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0148;AVGPOST=0.9951;RSQ=0.8591;ERATE=0.0005;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11963496 . AAAGG A 395 PASS INDEL;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0164;AVGPOST=0.9897;RSQ=0.7410;ERATE=0.0012;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11963509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.844;LDAF=0.1202;AVGPOST=0.9961;RSQ=0.9837;ERATE=0.0007;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 11963511 . GAGGAAGGGA G 4746 PASS INDEL;BAVGPOST=0.960;BRSQ=0.806;LDAF=0.1192;AVGPOST=0.9906;RSQ=0.9603;ERATE=0.0017;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 11963534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0173;AVGPOST=0.9971;RSQ=0.9313;ERATE=0.0008;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 11963586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0915;AVGPOST=0.9990;RSQ=0.9950;ERATE=0.0005;THETA=0.0007;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 11963588 . AAAAG A 748 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0180;AVGPOST=0.9895;RSQ=0.7639;ERATE=0.0013;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11963632 . G GAAA 4998 PASS INDEL;BAVGPOST=0.964;BRSQ=0.864;LDAF=0.1487;AVGPOST=0.9543;RSQ=0.8705;ERATE=0.0029;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 11963636 . A AAAT 10910 PASS INDEL;BAVGPOST=0.970;BRSQ=0.887;LDAF=0.1436;AVGPOST=0.9668;RSQ=0.9156;ERATE=0.0007;THETA=0.0005;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 11963637 . C CAAGG 10227 PASS INDEL;BAVGPOST=0.779;BRSQ=0.539;LDAF=0.3610;AVGPOST=0.7599;RSQ=0.5299;ERATE=0.0765;THETA=0.0003;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 11963657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.955;LDAF=0.4619;AVGPOST=0.9622;RSQ=0.9426;ERATE=0.0079;THETA=0.0004;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 11963666 rs67840235 AGATT A 8174 PASS INDEL;BAVGPOST=0.986;BRSQ=0.944;LDAF=0.1343;AVGPOST=0.9963;RSQ=0.9867;ERATE=0.0006;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 11963716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5424;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0008;THETA=0.0005;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 11963746 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0350;AVGPOST=0.9985;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 11963815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2243;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 11963845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11963940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11964105 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11964150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0157;AVGPOST=0.9971;RSQ=0.9208;ERATE=0.0004;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11964316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9272;ERATE=0.0004;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 11964438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1278;AVGPOST=0.9979;RSQ=0.9919;ERATE=0.0005;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 11964458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11964479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4696;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11964540 . CTCTG C 37 PASS INDEL;BAVGPOST=0.998;BRSQ=0.524;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4559;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11964544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11964600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1294;AVGPOST=0.9962;RSQ=0.9881;ERATE=0.0005;THETA=0.0005;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 11964634 . AT A 6582 PASS INDEL;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1161;AVGPOST=0.9923;RSQ=0.9689;ERATE=0.0014;THETA=0.0024;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 11964719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4175;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 11964798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11964828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11965098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1272;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 11965169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4138;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 11965178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11965279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9078;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11965280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9094;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11965309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11965369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9123;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11965374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6728;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 11965383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9997;RSQ=0.9016;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11965476 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.781;LDAF=0.0080;AVGPOST=0.9963;RSQ=0.8069;ERATE=0.0020;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11965540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5154;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 11965741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11965792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0617;AVGPOST=0.9979;RSQ=0.9866;ERATE=0.0004;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11965841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9377;AVGPOST=0.9979;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=2048;AN=2184 GT:DS:GL:BD 0.93772894 1
1 11965857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5396;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11965915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1246;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 11965925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0737;AVGPOST=0.9979;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11966052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11966070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11966071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11966251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5511;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11966265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2627;AVGPOST=0.9964;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 11966309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11966418 . TATC T 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6709;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11966440 . TTCTA T 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11966470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11966478 . AAAT A 219 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11966486 rs61393710 C CA 4292 PASS INDEL;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0629;AVGPOST=0.9963;RSQ=0.9741;ERATE=0.0006;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 11966507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0050;AVGPOST=0.9948;RSQ=0.6115;ERATE=0.0016;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11966719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6711;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11966882 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11967046 . TGAA T 448 PASS INDEL;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0076;AVGPOST=0.9931;RSQ=0.6311;ERATE=0.0016;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11967179 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1386;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 11967197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11967220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11967240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11967276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11967333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1386;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 11967507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11967531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11967535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11967611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8170;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11967626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0701;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 11967671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5438;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11967710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.9851;AVGPOST=0.9987;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 11967752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.6072;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11967774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.682;LDAF=0.0120;AVGPOST=0.9863;RSQ=0.5710;ERATE=0.0034;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11967806 rs112104939 A AT 35936 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3055;AVGPOST=0.9887;RSQ=0.9794;ERATE=0.0027;THETA=0.0007;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 11967815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0404;AVGPOST=0.9988;RSQ=0.9878;ERATE=0.0003;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 11967875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7684;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11967923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11967998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0735;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11968026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11968032 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 11968085 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11968122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8088;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11968262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11968280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0777;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 11968292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11968375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7314;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11968433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0924;AVGPOST=0.9970;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 11968456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11968498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11968509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2863;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0004;THETA=0.0015;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 11968538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11968539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0161;AVGPOST=0.9988;RSQ=0.9736;ERATE=0.0003;THETA=0.0022;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11968541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0190;AVGPOST=0.9988;RSQ=0.9722;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 11968645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11968700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9277;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=2026;AN=2184 GT:DS:GL:BD 0.92765570 1
1 11968712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0742;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 11968842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0065;AVGPOST=0.9973;RSQ=0.8370;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11968891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11968926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0733;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11968945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0099;AVGPOST=0.9963;RSQ=0.8515;ERATE=0.0006;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 11969070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7644;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11969132 . CCAAT C 165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6951;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11969138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2845;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 11969152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6307;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11969161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3346;AVGPOST=0.9944;RSQ=0.9901;ERATE=0.0006;THETA=0.0002;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 11969165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0675;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 11969372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0733;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11969424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11969443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11969452 . ACAT A 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5623;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11969519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11969529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8197;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11969652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11969653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0733;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 11969660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9128;ERATE=0.0016;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11969673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11969717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11969771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8474;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 11969832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11969868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11969972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11969978 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11969983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11970017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6427;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0001;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 11970030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2849;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 11970040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9487;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 11970066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0701;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 11970129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11970142 . TTA T 8036 PASS INDEL;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.2909;AVGPOST=0.9919;RSQ=0.9847;ERATE=0.0010;THETA=0.0001;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 11970149 rs35737030 TA T 31238 PASS INDEL;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.2926;AVGPOST=0.9915;RSQ=0.9849;ERATE=0.0007;THETA=0.0007;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 11970150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0783;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 11970163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11970193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11970207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6430;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 11970270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0742;AVGPOST=0.9990;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 11970275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11970620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6491;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11970659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5165;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11970880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11970926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11970947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9285;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11971096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9025;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11971169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8008;AVGPOST=0.9968;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 11971184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0066;AVGPOST=0.9935;RSQ=0.7021;ERATE=0.0006;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11971252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.900;LDAF=0.7107;AVGPOST=0.9246;RSQ=0.8611;ERATE=0.0145;THETA=0.0006;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 11971315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5518;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11971569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8379;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11971806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6738;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11971822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9287;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11971830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11971936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8878;AVGPOST=0.9951;RSQ=0.9801;ERATE=0.0003;THETA=0.0012;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 11971989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11972002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11972211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0406;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 11972373 . TTAAAC T 303 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6143;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11972406 rs72308821 CTTGATTG C 8686 PASS INDEL;BAVGPOST=0.993;BRSQ=0.924;LDAF=0.0407;AVGPOST=0.9973;RSQ=0.9741;ERATE=0.0006;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 11972467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11972493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.9195;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11972609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7871;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11972718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11972750 . C CA 87 PASS INDEL;BAVGPOST=0.986;BRSQ=0.464;LDAF=0.0275;AVGPOST=0.9641;RSQ=0.4533;ERATE=0.0098;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11972908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7234;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11973257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4697;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11973272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9662;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11973283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4785;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11973372 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11973467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11973505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11973866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4610;AVGPOST=0.9953;RSQ=0.9933;ERATE=0.0006;THETA=0.0006;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 11973888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0069;AVGPOST=0.9952;RSQ=0.6984;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11973993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6631;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11974098 . TACTC T 217 PASS INDEL;BAVGPOST=0.998;BRSQ=0.618;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6240;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11974118 . TAAC T 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4273;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11974157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6603;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11974203 . TTTG T 94 PASS INDEL;BAVGPOST=0.997;BRSQ=0.598;LDAF=0.0114;AVGPOST=0.9833;RSQ=0.4097;ERATE=0.0025;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11974241 . C CA 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4006;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11974349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2568;AVGPOST=0.9934;RSQ=0.9861;ERATE=0.0006;THETA=0.0012;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 11974561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.666;LDAF=0.0165;AVGPOST=0.9832;RSQ=0.6428;ERATE=0.0026;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 11974586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4954;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11974695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0026;AVGPOST=0.9965;RSQ=0.4943;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11974895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4395;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0092;AVGPOST=0.9964;RSQ=0.8416;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11975198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9590;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11975210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0295;AVGPOST=0.9986;RSQ=0.9793;ERATE=0.0005;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 11975264 . CCTT C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.6232;ERATE=0.0006;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 11975278 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3945;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6402;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11975305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4335;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.7862;ERATE=0.0010;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11975416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8014;AVGPOST=0.9947;RSQ=0.9862;ERATE=0.0005;THETA=0.0013;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 11975507 . A AC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0144;AVGPOST=0.9964;RSQ=0.8907;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11975518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.445;LDAF=0.0158;AVGPOST=0.9791;RSQ=0.4703;ERATE=0.0059;THETA=0.0019;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11975653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975770 . ATTGTTTTG A 469 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11975821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11975872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11975892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.9003;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11975904 . AT A 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5046;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11975957 . A AC 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5196;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11976006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7356;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11976016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2223;AVGPOST=0.9872;RSQ=0.9739;ERATE=0.0010;THETA=0.0065;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 11976042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0096;AVGPOST=0.9957;RSQ=0.8447;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11976071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9114;ERATE=0.0005;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11976249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.710;LDAF=0.0081;AVGPOST=0.9956;RSQ=0.7740;ERATE=0.0007;THETA=0.0028;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11976324 . G GT 15 PASS INDEL;BAVGPOST=0.993;BRSQ=0.533;LDAF=0.0141;AVGPOST=0.9793;RSQ=0.4135;ERATE=0.0045;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11976353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.961;LDAF=0.0761;AVGPOST=0.9906;RSQ=0.9534;ERATE=0.0009;THETA=0.0039;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 11976413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.937;LDAF=0.0462;AVGPOST=0.9828;RSQ=0.8642;ERATE=0.0007;THETA=0.0025;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 11976480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9163;ERATE=0.0005;THETA=0.0062;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11976554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0729;AVGPOST=0.9913;RSQ=0.9522;ERATE=0.0006;THETA=0.0015;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 11976637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5520;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11976644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1084;AVGPOST=0.9860;RSQ=0.9456;ERATE=0.0007;THETA=0.0066;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 11976654 . A AAATT 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5706;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11976693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6429;ERATE=0.0005;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11976777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7377;ERATE=0.0008;THETA=0.0115;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11976843 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7972;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11976848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11976886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7240;ERATE=0.0008;THETA=0.0052;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11976937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11976964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7554;ERATE=0.0009;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11976973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11977085 . CTTT C 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5757;ERATE=0.0005;THETA=0.0084;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11977143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11977147 . C CT 363 PASS INDEL;BAVGPOST=0.988;BRSQ=0.614;LDAF=0.0229;AVGPOST=0.9756;RSQ=0.5471;ERATE=0.0089;THETA=0.0041;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11977150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0066;AVGPOST=0.9975;RSQ=0.8518;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11977162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7443;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11977429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11977979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0040;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11978049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7927;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11978070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11978241 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11978483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8537;ERATE=0.0010;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11978492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11978512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11978519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7682;ERATE=0.0008;THETA=0.0109;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11978597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9984;RSQ=0.9733;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11978600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0065;AVGPOST=0.9952;RSQ=0.7453;ERATE=0.0004;THETA=0.0053;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11978716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1294;AVGPOST=0.9883;RSQ=0.9601;ERATE=0.0008;THETA=0.0046;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 11979177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.817;LDAF=0.0228;AVGPOST=0.9934;RSQ=0.8787;ERATE=0.0012;THETA=0.0038;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11979344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0145;AVGPOST=0.9904;RSQ=0.7544;ERATE=0.0005;THETA=0.0063;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 11979347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0290;AVGPOST=0.9955;RSQ=0.9406;ERATE=0.0004;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 11979478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.928;LDAF=0.1223;AVGPOST=0.9808;RSQ=0.9291;ERATE=0.0033;THETA=0.0009;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 11979504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5265;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11979533 rs72425035 CAAAAAAAA C 1138 PASS INDEL;BAVGPOST=0.939;BRSQ=0.622;LDAF=0.0912;AVGPOST=0.9639;RSQ=0.8407;ERATE=0.0015;THETA=0.0016;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 11979665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1220;AVGPOST=0.9974;RSQ=0.9922;ERATE=0.0006;THETA=0.0025;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 11979740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11979763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2861;AVGPOST=0.9941;RSQ=0.9905;ERATE=0.0005;THETA=0.0019;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 11979853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11980021 . C CTTAA 698 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6729;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11980025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6776;ERATE=0.0010;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11980236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11980372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1537;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0005;THETA=0.0040;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 11980394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9859;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11980473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0174;AVGPOST=0.9990;RSQ=0.9775;ERATE=0.0007;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 11980508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8881;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11980564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.521;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6052;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11980572 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2522;AVGPOST=0.9966;RSQ=0.9930;ERATE=0.0004;THETA=0.0007;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 11980607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0237;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11980748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4911;ERATE=0.0004;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11980801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0059;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11980802 . T TCTC 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0041;AVGPOST=0.9945;RSQ=0.5016;ERATE=0.0009;THETA=0.0063;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11980965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2859;AVGPOST=0.9962;RSQ=0.9932;ERATE=0.0006;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 11980977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2013;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 11981054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11981166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11981232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11981235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9603;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11981269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11981347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11981386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11981398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6812;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 11981520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11981588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11981604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8445;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11981752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1948;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 11981781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8644;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11981826 rs10706570 AC A 30679 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2823;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0007;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 11981938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9507;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11981974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0302;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 11981976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7101;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1551;AN=2184 GT:DS:GL:BD 0.71016484 1
1 11981989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11982024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9508;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11982030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.7237;AVGPOST=0.9924;RSQ=0.9874;ERATE=0.0004;THETA=0.0005;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 11982061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0145;AVGPOST=0.9987;RSQ=0.9702;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 11982062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8912;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11982129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8195;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11982174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1027;AVGPOST=0.9927;RSQ=0.9717;ERATE=0.0013;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 11982246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11982261 . C CG 125 PASS INDEL;BAVGPOST=0.988;BRSQ=0.521;LDAF=0.0177;AVGPOST=0.9760;RSQ=0.4307;ERATE=0.0037;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11982336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7681;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11982337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2021;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 11982354 . C CT 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11982406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9638;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11982458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2387;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 11982500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11982509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11982524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2064;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 11982610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11982614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7527;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11982752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0205;AVGPOST=0.9989;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11982833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0205;AVGPOST=0.9988;RSQ=0.9759;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 11982834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11982870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11982877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8742;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11982912 . AC A 709 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11982933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1200;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 11983049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11983082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2050;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11983168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11983169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9033;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11983224 rs67056928 CA C 4330 PASS INDEL;BAVGPOST=0.980;BRSQ=0.854;LDAF=0.0794;AVGPOST=0.9893;RSQ=0.9427;ERATE=0.0009;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 11983447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.937;LDAF=0.1987;AVGPOST=0.9867;RSQ=0.9698;ERATE=0.0014;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 11983454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11983670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7876;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11983750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7028;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11983816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 11983851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2049;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11983876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7763;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11983886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9320;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11983887 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11983900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2045;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11983978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2020;AVGPOST=0.9968;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 11984200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7552;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11984225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9192;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 11984247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1948;AVGPOST=0.9967;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 11984313 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.2378;AVGPOST=0.9954;RSQ=0.9905;ERATE=0.0005;THETA=0.0004;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 11984373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6976;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11984436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2132;AVGPOST=0.9964;RSQ=0.9923;ERATE=0.0008;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 11984480 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.6076;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11984487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11984555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11984644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11984719 . CAT C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4708;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11984775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6420;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11984793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11984794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9051;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11984801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1960;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 11984866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5505;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11984895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8995;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11985107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11985117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7603;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11985151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6224;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11985458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2044;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 11985599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 11985671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1987;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0007;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 11985696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0125;AVGPOST=0.9976;RSQ=0.9143;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 11985723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4221;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9523;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11985728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2211;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 11985729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11985989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11985992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2209;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0024;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 11986106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11986173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8194;ERATE=0.0005;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 11986252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11986268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7012;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11986278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2199;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 11986290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7644;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11986338 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7453;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11986362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8580;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11986444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 11986485 . TG T 243 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7719;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11986524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.772;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11986529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0428;AVGPOST=0.9960;RSQ=0.9683;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 11986545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.967;LDAF=0.3241;AVGPOST=0.9895;RSQ=0.9846;ERATE=0.0009;THETA=0.0008;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 11986675 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.959;LDAF=0.2160;AVGPOST=0.9888;RSQ=0.9767;ERATE=0.0014;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 11986721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11986806 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11986846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2207;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0017;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 11986872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11986948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0103;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11987066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11987168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11987197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8582;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11987203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4772;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11987250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0590;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 11987294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9985;RSQ=0.9648;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 11987370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0427;AVGPOST=0.9986;RSQ=0.9856;ERATE=0.0004;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 11987516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3121;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11987585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8474;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11987618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0056;AVGPOST=0.9958;RSQ=0.6832;ERATE=0.0015;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11987639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6513;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11987649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0244;AVGPOST=0.9973;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 11987730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0289;AVGPOST=0.9969;RSQ=0.9534;ERATE=0.0006;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 11987735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.849;LDAF=0.0403;AVGPOST=0.9913;RSQ=0.9214;ERATE=0.0005;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 11987792 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.886;LDAF=0.1866;AVGPOST=0.9596;RSQ=0.9184;ERATE=0.0039;THETA=0.0009;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 11987848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0228;AVGPOST=0.9879;RSQ=0.7893;ERATE=0.0010;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 11988365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7124;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11988444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0444;AVGPOST=0.9988;RSQ=0.9888;ERATE=0.0004;THETA=0.0012;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 11988520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3827;AVGPOST=0.9972;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 11988561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8914;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11988792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11988807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5404;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11988977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7577;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11989061 . ACT A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11989078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9311;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11989155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6132;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11989176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4294;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11989406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8012;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11989423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11989496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2377;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0011;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 11989552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8313;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11989578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6054;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11989581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2117;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0007;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 11989722 . T TA 5268 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0609;AVGPOST=0.9957;RSQ=0.9691;ERATE=0.0006;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 11989783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4435;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11989881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0134;AVGPOST=0.9973;RSQ=0.9241;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 11989891 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11989907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6547;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11989959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9615;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 11989974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0218;AVGPOST=0.9978;RSQ=0.9608;ERATE=0.0005;THETA=0.0015;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 11990013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11990022 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9619;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11990062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2038;AVGPOST=0.9923;RSQ=0.9845;ERATE=0.0003;THETA=0.0007;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 11990093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4249;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11990325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2189;AVGPOST=0.9915;RSQ=0.9843;ERATE=0.0012;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 11990336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0293;AVGPOST=0.9983;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 11990424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8890;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11990428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.4445;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11990506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9180;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 11990531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11990605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.4775;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11990680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6409;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11990685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0011;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 11990947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9297;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11991046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0995;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 11991071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 11991142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11991222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6568;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11991272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8760;ERATE=0.0005;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11991323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0777;AVGPOST=0.9974;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 11991376 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11991515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0997;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 11991554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0999;AVGPOST=0.9974;RSQ=0.9889;ERATE=0.0004;THETA=0.0007;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 11991602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8905;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 11991636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11991736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6392;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11991792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4778;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11991803 . G GA 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11991814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1563;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0006;THETA=0.0091;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 11991904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11991954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7611;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 11992006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11992082 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11992085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.4151;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11992116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0259;AVGPOST=0.9856;RSQ=0.7866;ERATE=0.0020;THETA=0.0018;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11992239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.480;LDAF=0.0976;AVGPOST=0.9013;RSQ=0.5773;ERATE=0.0108;THETA=0.0009;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 11992267 . GA G 137 PASS INDEL;BAVGPOST=0.572;BRSQ=0.065;LDAF=0.3352;AVGPOST=0.6227;RSQ=0.2607;ERATE=0.0258;THETA=0.0018;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 11992544 . A AG 74 PASS INDEL;BAVGPOST=0.476;BRSQ=0.014;LDAF=0.3061;AVGPOST=0.5969;RSQ=0.1938;ERATE=0.0274;THETA=0.0008;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 11992545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.952;LDAF=0.0166;AVGPOST=0.9954;RSQ=0.8979;ERATE=0.0007;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 11992725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6014;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11992870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8954;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 11992924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0082;AVGPOST=0.9965;RSQ=0.8389;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11993125 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11993210 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.1000;AVGPOST=0.9969;RSQ=0.9874;ERATE=0.0006;THETA=0.0023;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 11993354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6541;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11993495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11993498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11993551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11993629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0986;AVGPOST=0.9986;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 11993651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0985;AVGPOST=0.9988;RSQ=0.9945;ERATE=0.0004;THETA=0.0053;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 11993668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11993684 . TAAA T 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6016;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11993694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9530;ERATE=0.0003;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 11993789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 11993833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9229;ERATE=0.0015;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11993865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.898;LDAF=0.1151;AVGPOST=0.9897;RSQ=0.9602;ERATE=0.0011;THETA=0.0008;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 11994022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8589;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 11994042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11994071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8422;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 11994101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.773;LDAF=0.7877;AVGPOST=0.9301;RSQ=0.8101;ERATE=0.0031;THETA=0.0008;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 11994468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.797;LDAF=0.7774;AVGPOST=0.9360;RSQ=0.8294;ERATE=0.0004;THETA=0.0006;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 11994472 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.790;LDAF=0.7667;AVGPOST=0.9337;RSQ=0.8265;ERATE=0.0004;THETA=0.0053;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 11994474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.784;LDAF=0.0880;AVGPOST=0.9566;RSQ=0.7809;ERATE=0.0353;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 11994520 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0004;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 11994534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1232;AVGPOST=0.9926;RSQ=0.9740;ERATE=0.0231;THETA=0.0048;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 11994588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0826;AVGPOST=0.9985;RSQ=0.9922;ERATE=0.0063;THETA=0.0047;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 11994595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0247;AVGPOST=0.9941;RSQ=0.9053;ERATE=0.0084;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 11994616 rs67319155 GC G 10314 PASS INDEL;BAVGPOST=0.934;BRSQ=0.848;LDAF=0.2438;AVGPOST=0.9068;RSQ=0.8172;ERATE=0.0276;THETA=0.0006;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 11994627 . CG C 7288 PASS INDEL;BAVGPOST=0.936;BRSQ=0.856;LDAF=0.1891;AVGPOST=0.9474;RSQ=0.8878;ERATE=0.0015;THETA=0.0091;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 11994629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0554;AVGPOST=0.9961;RSQ=0.9693;ERATE=0.0087;THETA=0.0067;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 11994636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 11994660 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11994838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0004;THETA=0.0012;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 11994875 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 11994917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11995054 . CATTTTT C 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7961;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11995080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.563;LDAF=0.0046;AVGPOST=0.9942;RSQ=0.4357;ERATE=0.0006;THETA=0.0216;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 11998263 . GA G 751 PASS INDEL;BAVGPOST=0.778;BRSQ=0.095;LDAF=0.1968;AVGPOST=0.6832;RSQ=0.1447;ERATE=0.0146;THETA=0.0184;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 11998392 . GCACA G 1169 PASS INDEL;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0089;AVGPOST=0.9973;RSQ=0.8597;ERATE=0.0009;THETA=0.0045;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 11999293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.811;LDAF=0.0220;AVGPOST=0.9922;RSQ=0.8612;ERATE=0.0005;THETA=0.0276;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 11999310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.074;LDAF=0.0932;AVGPOST=0.8337;RSQ=0.1322;ERATE=0.0088;THETA=0.0470;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12000113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.352;BRSQ=0.082;LDAF=0.3788;AVGPOST=0.5605;RSQ=0.2012;ERATE=0.0174;THETA=0.0201;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 12004022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.521;BRSQ=0.087;LDAF=0.7714;AVGPOST=0.6778;RSQ=0.2569;ERATE=0.0120;THETA=0.0124;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 12004269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.049;LDAF=0.0230;AVGPOST=0.9561;RSQ=0.1178;ERATE=0.0014;THETA=0.0220;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12004281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.749;BRSQ=0.220;LDAF=0.1903;AVGPOST=0.7439;RSQ=0.3084;ERATE=0.0112;THETA=0.0155;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 12004547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.553;BRSQ=0.187;LDAF=0.3611;AVGPOST=0.6390;RSQ=0.3175;ERATE=0.0145;THETA=0.0242;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 12004573 . TTA T 18 PASS INDEL;BAVGPOST=0.994;BRSQ=0.192;LDAF=0.0114;AVGPOST=0.9783;RSQ=0.1285;ERATE=0.0029;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12004644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.506;LDAF=0.0116;AVGPOST=0.9866;RSQ=0.5858;ERATE=0.0046;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12004882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.543;LDAF=0.1669;AVGPOST=0.8542;RSQ=0.5398;ERATE=0.0439;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 12005040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.708;LDAF=0.0229;AVGPOST=0.9810;RSQ=0.6837;ERATE=0.0045;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12005168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.6428;AVGPOST=0.9903;RSQ=0.9885;ERATE=0.0013;THETA=0.0017;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 12005203 . T TG 13358 PASS INDEL;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.3320;AVGPOST=0.9781;RSQ=0.9647;ERATE=0.0014;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 12005311 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5336;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12005335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0733;AVGPOST=0.9991;RSQ=0.9946;ERATE=0.0003;THETA=0.0023;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 12005391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12005420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4158;ERATE=0.0012;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12005439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.601;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.6070;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12005450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.450;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5705;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12005473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3242;AVGPOST=0.9924;RSQ=0.9883;ERATE=0.0010;THETA=0.0010;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 12005480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6430;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12005492 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7709;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12005533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6765;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12005588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0737;AVGPOST=0.9978;RSQ=0.9869;ERATE=0.0006;THETA=0.0008;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 12005590 . AG A 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5849;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12005638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3254;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0006;THETA=0.0006;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 12005674 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0036;AVGPOST=0.9953;RSQ=0.4377;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12005699 . CGTT C 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5132;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12005758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8291;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12005850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5625;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12005906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0123;AVGPOST=0.9957;RSQ=0.8767;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 12006016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7507;AVGPOST=0.9944;RSQ=0.9898;ERATE=0.0007;THETA=0.0005;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 12006118 rs74206106 T TA 7033 PASS INDEL;BAVGPOST=0.993;BRSQ=0.905;LDAF=0.0339;AVGPOST=0.9948;RSQ=0.9523;ERATE=0.0004;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 12006180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3248;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0005;THETA=0.0011;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 12006188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.7518;AVGPOST=0.9858;RSQ=0.9759;ERATE=0.0015;THETA=0.0009;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 12006236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12006244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5376;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12006274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3237;AVGPOST=0.9903;RSQ=0.9849;ERATE=0.0006;THETA=0.0007;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 12006284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0072;AVGPOST=0.9971;RSQ=0.8480;ERATE=0.0007;THETA=0.0032;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12006323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.342;LDAF=0.0034;AVGPOST=0.9942;RSQ=0.2942;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12006503 . C CA 36 PASS INDEL;BAVGPOST=0.987;BRSQ=0.365;LDAF=0.0179;AVGPOST=0.9742;RSQ=0.4156;ERATE=0.0037;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12006507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0106;AVGPOST=0.9965;RSQ=0.8822;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12006619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0119;AVGPOST=0.9947;RSQ=0.8418;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 12006620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0191;AVGPOST=0.9963;RSQ=0.9180;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12006676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.436;LDAF=0.0042;AVGPOST=0.9953;RSQ=0.5451;ERATE=0.0007;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12006688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0202;AVGPOST=0.9931;RSQ=0.8669;ERATE=0.0005;THETA=0.0050;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 12006757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.3255;AVGPOST=0.9829;RSQ=0.9712;ERATE=0.0012;THETA=0.0071;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 12006776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6194;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12006833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0096;AVGPOST=0.9987;RSQ=0.9412;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12006902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.768;LDAF=0.0072;AVGPOST=0.9965;RSQ=0.7858;ERATE=0.0007;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12006978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3827;ERATE=0.0008;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12006986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4339;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12007020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3253;AVGPOST=0.9927;RSQ=0.9883;ERATE=0.0006;THETA=0.0043;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 12007033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.729;LDAF=0.0115;AVGPOST=0.9932;RSQ=0.7555;ERATE=0.0006;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12007054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6674;ERATE=0.0005;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12007085 . A AG 367 PASS INDEL;BAVGPOST=0.987;BRSQ=0.486;LDAF=0.0232;AVGPOST=0.9752;RSQ=0.5789;ERATE=0.0027;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12007120 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9226;ERATE=0.0003;THETA=0.0056;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12007163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6796;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12007377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12007453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5471;ERATE=0.0006;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12007477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8310;ERATE=0.0004;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12007588 . A AC 2470 PASS INDEL;BAVGPOST=0.880;BRSQ=0.766;LDAF=0.2898;AVGPOST=0.9059;RSQ=0.8514;ERATE=0.0029;THETA=0.0007;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 12007806 . C CA 40 PASS INDEL;BAVGPOST=0.989;BRSQ=0.396;LDAF=0.0147;AVGPOST=0.9789;RSQ=0.3939;ERATE=0.0052;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12007807 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.941;LDAF=0.3424;AVGPOST=0.9743;RSQ=0.9611;ERATE=0.0012;THETA=0.0005;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 12007808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9361;ERATE=0.0004;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12007811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5415;ERATE=0.0007;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12007825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.3431;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12007994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8539;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12008025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.662;LDAF=0.0049;AVGPOST=0.9957;RSQ=0.6048;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12008052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.515;LDAF=0.0051;AVGPOST=0.9936;RSQ=0.4467;ERATE=0.0010;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12008081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0038;AVGPOST=0.9956;RSQ=0.5266;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12008083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.878;LDAF=0.8037;AVGPOST=0.9541;RSQ=0.9000;ERATE=0.0046;THETA=0.0009;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 12008093 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.4204;ERATE=0.0004;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12008369 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.8241;ERATE=0.0005;THETA=0.0054;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12008376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6805;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12008388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.593;LDAF=0.1538;AVGPOST=0.8864;RSQ=0.6142;ERATE=0.0263;THETA=0.0009;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 12008431 . ACT A 9092 PASS INDEL;BAVGPOST=0.889;BRSQ=0.766;LDAF=0.3033;AVGPOST=0.8568;RSQ=0.7375;ERATE=0.0120;THETA=0.0007;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 12008511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.659;LDAF=0.0096;AVGPOST=0.9942;RSQ=0.7630;ERATE=0.0004;THETA=0.0082;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12008591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.3285;AVGPOST=0.9802;RSQ=0.9705;ERATE=0.0007;THETA=0.0015;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 12008599 . C CG 10 PASS INDEL;BAVGPOST=0.996;BRSQ=0.250;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5566;ERATE=0.0006;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12008612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.951;LDAF=0.3183;AVGPOST=0.9784;RSQ=0.9661;ERATE=0.0009;THETA=0.0033;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 12008613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4428;ERATE=0.0006;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12009280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.698;LDAF=0.0191;AVGPOST=0.9862;RSQ=0.7243;ERATE=0.0025;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12009402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5243;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12009505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6217;ERATE=0.0004;THETA=0.0115;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12009518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6560;ERATE=0.0004;THETA=0.0106;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12009698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.2017;AVGPOST=0.9715;RSQ=0.9337;ERATE=0.0009;THETA=0.0004;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 12009782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6928;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12009825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5920;ERATE=0.0007;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12009908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0188;AVGPOST=0.9975;RSQ=0.9395;ERATE=0.0005;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12009974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.981;LDAF=0.5814;AVGPOST=0.9697;RSQ=0.9610;ERATE=0.0012;THETA=0.0039;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 12009993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0248;AVGPOST=0.9966;RSQ=0.9496;ERATE=0.0006;THETA=0.0035;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 12010060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0716;AVGPOST=0.9931;RSQ=0.9583;ERATE=0.0014;THETA=0.0010;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12010087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0885;AVGPOST=0.9878;RSQ=0.9394;ERATE=0.0015;THETA=0.0014;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 12010173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0827;AVGPOST=0.9958;RSQ=0.9776;ERATE=0.0007;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 12010276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.637;BRSQ=0.339;LDAF=0.4870;AVGPOST=0.7229;RSQ=0.5620;ERATE=0.0094;THETA=0.0006;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 12010370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4555;AVGPOST=0.9772;RSQ=0.9656;ERATE=0.0011;THETA=0.0010;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 12010641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9991;RSQ=0.9751;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 12010666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8972;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12010684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0143;AVGPOST=0.9981;RSQ=0.9516;ERATE=0.0004;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 12010704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0401;AVGPOST=0.9963;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 12010776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0005;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 12010802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9699;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12010813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0126;AVGPOST=0.9990;RSQ=0.9673;ERATE=0.0004;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12010954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9712;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12010962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0004;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 12010979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12011002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0375;AVGPOST=0.9964;RSQ=0.9677;ERATE=0.0004;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 12011024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9558;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12011042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7903;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8381;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12011213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8385;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12011214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8907;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12011367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.8018;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12011401 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 12011447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12011459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7805;ERATE=0.0006;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12011483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12011565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8399;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12011637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5703;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7826;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12011664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6934;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0039;AVGPOST=0.9951;RSQ=0.5328;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12011765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0066;AVGPOST=0.9904;RSQ=0.4567;ERATE=0.0007;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12011768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0140;AVGPOST=0.9984;RSQ=0.9482;ERATE=0.0006;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12011809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12011834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6256;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12011888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0005;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12011892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7448;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12011947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9623;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0260;AVGPOST=0.9977;RSQ=0.9640;ERATE=0.0005;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 12012101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0149;AVGPOST=0.9966;RSQ=0.9095;ERATE=0.0009;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9435;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9607;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012272 rs112312181 C CCGG 1015 PASS INDEL;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0152;AVGPOST=0.9958;RSQ=0.8835;ERATE=0.0008;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 12012297 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7702;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12012337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012365 rs112751896 GC G 423 PASS INDEL;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0134;AVGPOST=0.9990;RSQ=0.9660;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.946;LDAF=0.1819;AVGPOST=0.9715;RSQ=0.9266;ERATE=0.0008;THETA=0.0009;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 12012434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.5370;AVGPOST=0.9801;RSQ=0.9728;ERATE=0.0013;THETA=0.0015;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 12012439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0059;AVGPOST=0.9928;RSQ=0.4725;ERATE=0.0013;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12012451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.858;LDAF=0.0209;AVGPOST=0.9927;RSQ=0.8558;ERATE=0.0007;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12012458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0208;AVGPOST=0.9897;RSQ=0.8014;ERATE=0.0018;THETA=0.0026;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12012491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12012619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.395;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.4718;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12012634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.987;LDAF=0.5343;AVGPOST=0.9767;RSQ=0.9690;ERATE=0.0014;THETA=0.0004;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 12012635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12012688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12012699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12012761 . AGCCTGGT A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5097;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12012769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9994;RSQ=0.9829;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12012781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7752;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12012947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12012951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7426;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12012966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12012999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12013093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4043;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12013111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7397;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12013196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12013225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9724;ERATE=0.0004;THETA=0.0020;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12013328 . G GA 675 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9606;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12013407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0021;AVGPOST=0.9963;RSQ=0.3579;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12013411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.643;LDAF=0.0047;AVGPOST=0.9948;RSQ=0.5606;ERATE=0.0014;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12013412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0462;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0004;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 12013413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5786;AVGPOST=0.9810;RSQ=0.9745;ERATE=0.0016;THETA=0.0016;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 12013454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6365;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12013596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12013730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0055;AVGPOST=0.9978;RSQ=0.8631;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12013758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8677;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12013797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12013820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12013878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12013922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9175;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12013952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0431;AVGPOST=0.9963;RSQ=0.9747;ERATE=0.0005;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 12014000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12014023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0827;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 12014090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12014129 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.656;LDAF=0.0495;AVGPOST=0.9633;RSQ=0.6882;ERATE=0.0259;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 12014155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9142;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12014183 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8535;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12014230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8874;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12014250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7559;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12014341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 12014351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0830;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0004;THETA=0.0009;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 12014359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0481;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0005;THETA=0.0010;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 12014381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9699;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12014404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8764;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12014446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12014449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.8934;ERATE=0.0004;THETA=0.0261;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12014518 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0236;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12014520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.910;LDAF=0.0260;AVGPOST=0.9946;RSQ=0.9195;ERATE=0.0009;THETA=0.0308;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 12014521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0217;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12014529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0354;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12014589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12014601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0004;THETA=0.0209;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12014627 . GTAC G 731 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8753;ERATE=0.0008;THETA=0.0245;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12014651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7884;ERATE=0.0005;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12014653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0197;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12014655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6258;ERATE=0.0003;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12014678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.830;LDAF=0.0150;AVGPOST=0.9934;RSQ=0.8286;ERATE=0.0004;THETA=0.0260;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12014754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0055;AVGPOST=0.9962;RSQ=0.7473;ERATE=0.0020;THETA=0.0094;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12014765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0510;AVGPOST=0.9943;RSQ=0.9584;ERATE=0.0005;THETA=0.0208;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 12014776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7496;ERATE=0.0007;THETA=0.0102;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12014789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.959;LDAF=0.1430;AVGPOST=0.9861;RSQ=0.9704;ERATE=0.0011;THETA=0.0143;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 12014790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8188;ERATE=0.0005;THETA=0.0106;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12014791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.862;LDAF=0.3460;AVGPOST=0.9132;RSQ=0.8776;ERATE=0.0222;THETA=0.0292;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 12014850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0392;AVGPOST=0.9938;RSQ=0.9396;ERATE=0.0004;THETA=0.0072;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 12014853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.898;LDAF=0.0377;AVGPOST=0.9917;RSQ=0.9019;ERATE=0.0006;THETA=0.0194;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 12014867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0005;THETA=0.0155;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12014906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.880;LDAF=0.0209;AVGPOST=0.9940;RSQ=0.8824;ERATE=0.0005;THETA=0.0114;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 12014907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.879;LDAF=0.8160;AVGPOST=0.9576;RSQ=0.8969;ERATE=0.0008;THETA=0.0093;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 12014996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0147;AVGPOST=0.9955;RSQ=0.8846;ERATE=0.0003;THETA=0.0101;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12015093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.512;LDAF=0.0054;AVGPOST=0.9947;RSQ=0.5854;ERATE=0.0008;THETA=0.0124;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12015186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.888;LDAF=0.1256;AVGPOST=0.9416;RSQ=0.7994;ERATE=0.0027;THETA=0.0085;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 12015192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0063;AVGPOST=0.9959;RSQ=0.7635;ERATE=0.0004;THETA=0.0035;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12015280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.870;LDAF=0.0495;AVGPOST=0.9815;RSQ=0.8724;ERATE=0.0015;THETA=0.0012;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 12015404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.754;LDAF=0.0157;AVGPOST=0.9877;RSQ=0.6927;ERATE=0.0009;THETA=0.0114;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12015412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.669;LDAF=0.0151;AVGPOST=0.9826;RSQ=0.5261;ERATE=0.0019;THETA=0.0061;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12015429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.937;LDAF=0.1428;AVGPOST=0.9688;RSQ=0.9097;ERATE=0.0008;THETA=0.0030;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 12015497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.792;LDAF=0.0650;AVGPOST=0.9688;RSQ=0.8022;ERATE=0.0009;THETA=0.0023;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 12015548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.643;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6455;ERATE=0.0005;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12015554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12015603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0004;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12015665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8608;AVGPOST=0.9931;RSQ=0.9798;ERATE=0.0006;THETA=0.0004;AC=1880;AN=2184 GT:DS:GL:BD 0.86080587 1
1 12015746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12015769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0698;AVGPOST=0.9992;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12015774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0121;AVGPOST=0.9991;RSQ=0.9740;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12015852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12015855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12015918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12015980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12016063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0223;AVGPOST=0.9975;RSQ=0.9518;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 12016117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9714;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12016270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0698;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12016340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12016416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0701;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0019;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12016456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.967;LDAF=0.2066;AVGPOST=0.9842;RSQ=0.9648;ERATE=0.0005;THETA=0.0007;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 12016579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12016665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12016666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12016737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9646;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 12016754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12016814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12016816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12016891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12016913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12016931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 12016969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12017024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9647;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12017053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0700;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0015;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12017098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9149;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12017128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0697;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 12017144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6571;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12017206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12017295 . TC T 286 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7549;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12017499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12017516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12017560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12017568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12017590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0711;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0004;THETA=0.0013;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 12017642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12017672 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8439;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 12017709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8440;AVGPOST=0.9972;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 12017725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12017739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12017780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12017856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12017898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12017955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.929;LDAF=0.2329;AVGPOST=0.9631;RSQ=0.9317;ERATE=0.0006;THETA=0.0013;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 12018061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9374;ERATE=0.0003;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12018094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0702;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0004;THETA=0.0012;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12018104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8089;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12018146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0766;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0004;THETA=0.0024;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 12018166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0857;AVGPOST=0.9988;RSQ=0.9937;ERATE=0.0005;THETA=0.0022;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 12018198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8393;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12018251 . A AT 396 PASS INDEL;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8814;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12018316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0662;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 12018353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0784;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 12018382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9833;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12018383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.8387;AVGPOST=0.9917;RSQ=0.9767;ERATE=0.0008;THETA=0.0063;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 12018435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.8678;AVGPOST=0.9905;RSQ=0.9695;ERATE=0.0006;THETA=0.0030;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 12018447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0143;AVGPOST=0.9993;RSQ=0.9788;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12018518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12018536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8886;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12018581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.931;LDAF=0.0778;AVGPOST=0.9952;RSQ=0.9752;ERATE=0.0005;THETA=0.0027;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 12018599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.783;LDAF=0.0267;AVGPOST=0.9974;RSQ=0.9597;ERATE=0.0003;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 12018641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12018660 . T TG 328 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9221;ERATE=0.0004;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12018670 . G GAC 283 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0118;AVGPOST=0.9982;RSQ=0.9244;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12018684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0713;AVGPOST=0.9949;RSQ=0.9674;ERATE=0.0019;THETA=0.0014;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12018713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6741;ERATE=0.0006;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12018715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.748;LDAF=0.0088;AVGPOST=0.9950;RSQ=0.7613;ERATE=0.0007;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12018750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0688;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 12018810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.4097;ERATE=0.0003;THETA=0.0031;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12018835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9564;ERATE=0.0011;THETA=0.0056;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12018850 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0107;AVGPOST=0.9978;RSQ=0.9162;ERATE=0.0009;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12019072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.678;LDAF=0.0060;AVGPOST=0.9971;RSQ=0.7911;ERATE=0.0005;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12019104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0610;AVGPOST=0.9947;RSQ=0.9652;ERATE=0.0004;THETA=0.0008;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 12019147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12019149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.950;LDAF=0.0785;AVGPOST=0.9959;RSQ=0.9766;ERATE=0.0006;THETA=0.0015;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 12019153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.4569;ERATE=0.0009;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12019168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0165;AVGPOST=0.9949;RSQ=0.8924;ERATE=0.0004;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12019188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0161;AVGPOST=0.9952;RSQ=0.8853;ERATE=0.0013;THETA=0.0033;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 12019217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4249;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12019345 . T TC 1290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9670;ERATE=0.0004;THETA=0.0039;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12019457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.7304;AVGPOST=0.9817;RSQ=0.9668;ERATE=0.0015;THETA=0.0017;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 12019489 . T TCCACTG 459 PASS INDEL;BAVGPOST=0.996;BRSQ=0.548;LDAF=0.0060;AVGPOST=0.9948;RSQ=0.6454;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12019516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12019654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12019697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0056;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12019758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12019887 . AAAC A 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12019959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12019978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12020064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12020111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9667;ERATE=0.0002;THETA=0.0017;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12020180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0296;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 12020321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0119;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12020626 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.5090;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12020692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6359;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12020702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9431;ERATE=0.0002;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12020776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3311;AVGPOST=0.9947;RSQ=0.9920;ERATE=0.0004;THETA=0.0048;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 12020806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6813;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12020835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3280;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 12020841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.8926;ERATE=0.0003;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12020846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12020865 . T TA 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9976;RSQ=0.3672;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12020877 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0171;AVGPOST=0.9985;RSQ=0.9652;ERATE=0.0002;THETA=0.0014;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 12021006 . TG T 62 PASS INDEL;BAVGPOST=0.996;BRSQ=0.823;LDAF=0.0048;AVGPOST=0.9942;RSQ=0.6102;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12021006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8887;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12021021 . GTGTC G 561 PASS INDEL;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0093;AVGPOST=0.9921;RSQ=0.6914;ERATE=0.0018;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12021071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12021108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12021118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6884;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12021187 . T TG 368 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12021189 . A AGT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8427;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12021281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0513;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 12021358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12021373 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12021393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12021486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12021517 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5090;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 12021551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1056;AVGPOST=0.9986;RSQ=0.9942;ERATE=0.0004;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 12021559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12021589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2353;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 12021766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12021781 . TAGAC T 4626 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0207;AVGPOST=0.9984;RSQ=0.9687;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 12021783 . ACAGT A 4207 PASS INDEL;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0204;AVGPOST=0.9988;RSQ=0.9782;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 12021786 . CA C 287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12022101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12022110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12022177 rs60284801 AGAGCTGCT A 6662 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 12022266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12022314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12022378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5963;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12022381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5529;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12022519 . TG T 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0057;AVGPOST=0.9942;RSQ=0.5762;ERATE=0.0010;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12022588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9411;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12022641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8129;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12022734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12022811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12022913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12022937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 12022975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2764;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 12023003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12023151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 12023179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0054;AVGPOST=0.9972;RSQ=0.7901;ERATE=0.0010;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12023186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2390;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 12023259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8920;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12023354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0210;AVGPOST=0.9989;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 12023561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12023565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12023626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8946;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12023655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9771;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12023708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8289;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12023884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12023893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7412;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12023900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9610;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12023913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12023929 rs34040514 C CA 5561 PASS INDEL;BAVGPOST=0.797;BRSQ=0.647;LDAF=0.6001;AVGPOST=0.7997;RSQ=0.6911;ERATE=0.0155;THETA=0.0004;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 12024068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9205;ERATE=0.0005;THETA=0.0023;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12024117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12024174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12024205 . TG T 393 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0078;AVGPOST=0.9962;RSQ=0.7973;ERATE=0.0005;THETA=0.0032;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12024207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12024215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8864;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12024294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1053;AVGPOST=0.9971;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 12024427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0002;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12024454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12024487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9511;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12024635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12024656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12024742 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 12024755 . C CGG 458 PASS INDEL;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8631;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12024775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12024805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12024869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12025024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8410;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12025115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6364;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12025173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12025432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5647;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12025532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8412;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12025562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7729;ERATE=0.0005;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12025601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7884;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12025816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3171;AVGPOST=0.9941;RSQ=0.9903;ERATE=0.0005;THETA=0.0008;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 12025899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9517;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12025915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3544;AVGPOST=0.9899;RSQ=0.9840;ERATE=0.0024;THETA=0.0002;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 12026051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.525;LDAF=0.0051;AVGPOST=0.9924;RSQ=0.4054;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12026170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0112;AVGPOST=0.9940;RSQ=0.7897;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12026275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0140;AVGPOST=0.9938;RSQ=0.8282;ERATE=0.0022;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12026412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4795;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12026424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.371;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6216;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12026509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12026533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12026536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12026537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6972;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12026650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12026777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3077;AVGPOST=0.9962;RSQ=0.9926;ERATE=0.0005;THETA=0.0006;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 12026797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9836;ERATE=0.0004;THETA=0.0010;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 12026955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3194;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12026983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.720;LDAF=0.0081;AVGPOST=0.9965;RSQ=0.8127;ERATE=0.0006;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12026987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3566;AVGPOST=0.9871;RSQ=0.9779;ERATE=0.0010;THETA=0.0005;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 12027023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0554;AVGPOST=0.9952;RSQ=0.9669;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 12027053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9716;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12027107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0513;AVGPOST=0.9989;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 12027158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12027340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12027377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12027380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9609;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12027468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.770;LDAF=0.0214;AVGPOST=0.9924;RSQ=0.8465;ERATE=0.0007;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12027483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0237;AVGPOST=0.9983;RSQ=0.9708;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 12027696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0145;AVGPOST=0.9936;RSQ=0.8396;ERATE=0.0013;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12027732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8315;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12027765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0662;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 12027788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12027804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0086;AVGPOST=0.9954;RSQ=0.7753;ERATE=0.0015;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12027836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6247;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12027901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4854;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12027989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8136;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12028155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12028201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7939;ERATE=0.0013;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12028284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6136;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12028454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12028733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.806;LDAF=0.9355;AVGPOST=0.9706;RSQ=0.8235;ERATE=0.0009;THETA=0.0005;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 12028798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12028903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.9068;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12028932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2723;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0010;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 12029044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12029132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.729;LDAF=0.0117;AVGPOST=0.9919;RSQ=0.7577;ERATE=0.0024;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12029165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6335;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12029211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0082;AVGPOST=0.9952;RSQ=0.8089;ERATE=0.0008;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12029288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2370;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 12029320 . GC G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5120;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12029329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8292;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12029334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9304;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12029527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9108;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12029550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7926;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12029613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12029885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12029888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12029921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8363;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12029979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8670;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12029995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0102;AVGPOST=0.9961;RSQ=0.8598;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12030005 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9583;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12030074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12030212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9045;ERATE=0.0011;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12030233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12030253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12030355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12030356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0003;THETA=0.0064;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12030521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8254;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12030634 . G GCCCT 964 PASS INDEL;BAVGPOST=0.998;BRSQ=0.738;LDAF=0.0054;AVGPOST=0.9964;RSQ=0.7340;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12030662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9261;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12030725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7621;ERATE=0.0013;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12030741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12030955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6773;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12030965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7177;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12031034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12031041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12031139 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8395;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12031195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12031198 . GT G 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7272;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12031253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9232;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12031255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12031318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8528;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12031331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5343;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9541;ERATE=0.0004;THETA=0.0053;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12031617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12031748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7510;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12031796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031874 . CG C 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12031885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0167;AVGPOST=0.9991;RSQ=0.9760;ERATE=0.0005;THETA=0.0026;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 12031886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8248;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12031932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12031956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1991;AVGPOST=0.9974;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 12031971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12032001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2281;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0013;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 12032201 . CTG C 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12032230 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12032271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9426;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12032383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5981;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 12032400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12032426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12032445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 12032477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12032499 . G GA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4692;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12032512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7758;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12032515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0135;AVGPOST=0.9986;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12032519 . AT A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8180;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12032661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7595;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12032703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12032761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12032780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12032800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6680;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12032991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5756;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 12033211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12033417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1922;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0020;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 12033433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12033453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.856;LDAF=0.0403;AVGPOST=0.9868;RSQ=0.8708;ERATE=0.0004;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 12033529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7047;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12033549 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9424;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12033614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12033638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1930;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 12033697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 12033715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0159;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0006;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12033810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.911;LDAF=0.7135;AVGPOST=0.9095;RSQ=0.8342;ERATE=0.0090;THETA=0.0013;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 12033958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8158;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12034078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4452;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12034231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5224;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12034464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7071;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12034537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12034684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7173;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12034849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12034969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0021;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12035040 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12035137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8908;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12035143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6326;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12035172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9670;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 12035209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1192;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0004;THETA=0.0010;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 12035255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8891;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12035271 rs111496033 T TA 6862 PASS INDEL;BAVGPOST=0.989;BRSQ=0.926;LDAF=0.0662;AVGPOST=0.9787;RSQ=0.8808;ERATE=0.0068;THETA=0.0021;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 12035504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0003;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12035505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.471;LDAF=0.0084;AVGPOST=0.9919;RSQ=0.5951;ERATE=0.0030;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12035520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12035525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12035661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6350;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12035685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12035687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12035711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8435;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12035832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0123;AVGPOST=0.9934;RSQ=0.8006;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12035870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.448;LDAF=0.0103;AVGPOST=0.9888;RSQ=0.5764;ERATE=0.0025;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12035914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0069;AVGPOST=0.9949;RSQ=0.7148;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12035924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0129;AVGPOST=0.9942;RSQ=0.8249;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12036022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0382;AVGPOST=0.9938;RSQ=0.9450;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 12036029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7357;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12036042 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6331;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12036086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12036100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.7119;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12036122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4448;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12036165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9354;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12036370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0098;AVGPOST=0.9968;RSQ=0.8646;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12036460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7762;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12036469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12036493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12036531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.615;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5199;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12036727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.6333;AVGPOST=0.9894;RSQ=0.9824;ERATE=0.0006;THETA=0.0005;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 12036913 . ACT A 261 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8373;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12037054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6865;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12037086 . CAT C 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4191;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12037166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8051;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12037214 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8529;ERATE=0.0003;THETA=0.0071;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12037248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8594;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12037457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12037472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12037488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12037564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9981;RSQ=0.9791;ERATE=0.0003;THETA=0.0016;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 12037615 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.8062;ERATE=0.0004;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12037668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9273;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12037711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.6843;AVGPOST=0.9804;RSQ=0.9660;ERATE=0.0030;THETA=0.0006;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 12037798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0143;AVGPOST=0.9990;RSQ=0.9716;ERATE=0.0004;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12037806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12037843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12037869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12037913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12037917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9238;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12037935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0147;AVGPOST=0.9985;RSQ=0.9642;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12038039 . TA T 5093 PASS INDEL;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0418;AVGPOST=0.9975;RSQ=0.9749;ERATE=0.0004;THETA=0.0027;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 12038074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0046;AVGPOST=0.9956;RSQ=0.6160;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12038151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.9061;ERATE=0.0004;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12038153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.8790;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12038246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12038305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12038325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12038351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12038511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0128;AVGPOST=0.9987;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 12038597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8929;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12038605 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.9087;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12038798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9655;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12038854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.9029;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12038937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12038970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.417;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3783;ERATE=0.0006;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12038996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8390;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12039014 rs5772303 CT C 20179 PASS INDEL;BAVGPOST=0.970;BRSQ=0.928;LDAF=0.2209;AVGPOST=0.9475;RSQ=0.8863;ERATE=0.0015;THETA=0.0006;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 12039039 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2687;AVGPOST=0.9916;RSQ=0.9811;ERATE=0.0010;THETA=0.0008;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 12039057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12039087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0177;AVGPOST=0.9988;RSQ=0.9704;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 12039223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12039328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4741;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12039359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0017;AVGPOST=0.9969;RSQ=0.3847;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12039360 . GC G 1040 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 12039538 . GC G 210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8178;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12039575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2710;AVGPOST=0.9923;RSQ=0.9829;ERATE=0.0007;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 12039586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6898;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12039623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.913;LDAF=0.0445;AVGPOST=0.9842;RSQ=0.8558;ERATE=0.0006;THETA=0.0021;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 12039702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7392;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12039845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12039999 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9214;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12040062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12040307 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12040357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 12040441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4623;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12040510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.1518;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12040538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0350;AVGPOST=0.9989;RSQ=0.9846;ERATE=0.0005;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 12040584 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5400;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12040646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2580;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0009;THETA=0.0004;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 12040727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8527;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12040752 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12040828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 12040895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7546;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12040978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12041018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.9097;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12041072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9387;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12041073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12041153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12041195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2311;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0057;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 12041198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8645;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12041573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12041673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0076;AVGPOST=0.9956;RSQ=0.7610;ERATE=0.0013;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12041726 . TC T 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8948;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12041810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2590;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 12041825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12041828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12041833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8963;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12041907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12041937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6779;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12042358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8756;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12042496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7948;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12042522 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7178;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12042676 rs35071335 GGTT G 15411 PASS INDEL;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1777;AVGPOST=0.9968;RSQ=0.9915;ERATE=0.0007;THETA=0.0006;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 12042707 . TCAC T 484 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6585;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12042743 . G GCGT 24063 PASS INDEL;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.5017;AVGPOST=0.9826;RSQ=0.9722;ERATE=0.0019;THETA=0.0008;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 12042808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2353;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 12042823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.378;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3643;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12042828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 12042836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0057;AVGPOST=0.9974;RSQ=0.8329;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12042873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12042962 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12042986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12043025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12043057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12043061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2524;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 12043088 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6940;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12043103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12043128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12043318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12043371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.7051;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12043482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12043495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9482;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12043585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12043594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1810;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 12043614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12043754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12043788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12043799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12043844 . CCCCAGGCA C 21353 PASS INDEL;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.1183;AVGPOST=0.9927;RSQ=0.9744;ERATE=0.0007;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 12043861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12044062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12044218 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12044276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0762;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 12044328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044462 . ATTAC A 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4927;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12044549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12044656 . GAC G 199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6720;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12044668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12044738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12044739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7285;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12044765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9130;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12044800 . CT C 1921 PASS INDEL;BAVGPOST=0.833;BRSQ=0.508;LDAF=0.2554;AVGPOST=0.7632;RSQ=0.4836;ERATE=0.0504;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 12044891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9981;RSQ=0.9341;ERATE=0.0007;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12044935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9971;RSQ=0.7420;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12044997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.940;LDAF=0.3452;AVGPOST=0.9890;RSQ=0.9808;ERATE=0.0006;THETA=0.0008;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 12045145 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.873;LDAF=0.0543;AVGPOST=0.9820;RSQ=0.8623;ERATE=0.0017;THETA=0.0024;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 12045348 . T TA 51 PASS INDEL;BAVGPOST=0.997;BRSQ=0.641;LDAF=0.0121;AVGPOST=0.9847;RSQ=0.4728;ERATE=0.0028;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12045351 . CTTGAG C 1040 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0094;AVGPOST=0.9974;RSQ=0.8630;ERATE=0.0010;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12045570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7373;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12045608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6892;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12045644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0126;AVGPOST=0.9983;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12045884 . T TA 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3555;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12045924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9832;ERATE=0.0003;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12046055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6492;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12046195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0133;AVGPOST=0.9984;RSQ=0.9534;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12046237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9900;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12046347 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12046379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12046437 . AT A 290 PASS INDEL;BAVGPOST=0.958;BRSQ=0.455;LDAF=0.0611;AVGPOST=0.9204;RSQ=0.4476;ERATE=0.0215;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 12046448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0071;AVGPOST=0.9958;RSQ=0.8015;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12046540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4034;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12046544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7285;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12046592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9990;RSQ=0.9800;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 12046606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9973;RSQ=0.8844;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12046638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.8964;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12046644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2644;AVGPOST=0.9902;RSQ=0.9812;ERATE=0.0012;THETA=0.0005;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 12046732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9445;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12046736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12046821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8559;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12046872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12046908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0306;AVGPOST=0.9968;RSQ=0.9609;ERATE=0.0003;THETA=0.0012;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 12047124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12047180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 12047336 . T TA 1041 PASS INDEL;BAVGPOST=0.990;BRSQ=0.808;LDAF=0.0235;AVGPOST=0.9880;RSQ=0.8097;ERATE=0.0019;THETA=0.0012;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 12047420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12047538 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12047682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9555;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12047713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9993;RSQ=0.9872;ERATE=0.0003;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 12047950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0003;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12047997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8963;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048085 . T TCC 8796 PASS INDEL;BAVGPOST=0.971;BRSQ=0.946;LDAF=0.2726;AVGPOST=0.9776;RSQ=0.9616;ERATE=0.0006;THETA=0.0008;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 12048102 rs3833523 C CCA 41838 PASS INDEL;BAVGPOST=0.971;BRSQ=0.949;LDAF=0.2797;AVGPOST=0.9799;RSQ=0.9668;ERATE=0.0005;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 12048103 . A ACT 9099 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.2730;AVGPOST=0.9787;RSQ=0.9630;ERATE=0.0006;THETA=0.0015;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 12048105 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 12048564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12048712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12048717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12048888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12048982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12049110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12049313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12049388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12049434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049631 . TG T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7280;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12049903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12049983 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5953;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12050001 . TTTG T 675 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12050065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8938;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12050130 . A ACCTT 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6770;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12050137 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12050152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0137;AVGPOST=0.9984;RSQ=0.9510;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12050212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5838;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0005;THETA=0.0046;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 12050419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12050499 rs35921135 C CA 63204 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5847;AVGPOST=0.9945;RSQ=0.9920;ERATE=0.0011;THETA=0.0003;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 12050543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4552;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0004;THETA=0.0026;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 12050572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5866;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0004;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 12050629 rs35164768 T TC 61461 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5924;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 12050691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8657;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12050746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5660;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12050779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0936;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 12050827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5869;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 12050884 . T TA 1075 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8953;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12050896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12050928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8463;ERATE=0.0009;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12050981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12051089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5865;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0006;THETA=0.0029;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 12051116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5866;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 12051250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.9067;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12051274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7795;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12051458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8980;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12051538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12051616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9367;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 12051645 . TC T 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8821;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12051758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9250;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12052026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0197;AVGPOST=0.9942;RSQ=0.8728;ERATE=0.0008;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 12052030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4846;AVGPOST=0.9974;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 12052088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12052124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6568;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12052236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 12052249 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5553;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12052500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0734;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 12052556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12052770 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12052823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5554;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 12052831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6933;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12052895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12052965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12053011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0307;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0004;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 12053017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12053276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0235;AVGPOST=0.9984;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 12053299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4334;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12053385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.4276;AVGPOST=0.9971;RSQ=0.9959;ERATE=0.0005;THETA=0.0043;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 12053416 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0161;AVGPOST=0.9936;RSQ=0.8486;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12053497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9207;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12053499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.492;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3408;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12053537 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12053662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7190;ERATE=0.0010;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12053676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5694;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0008;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 12053753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4816;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12053978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12054039 rs60655095 GGGA G 27224 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4319;AVGPOST=0.9874;RSQ=0.9819;ERATE=0.0027;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 12054055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12054096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12054120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7443;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12054155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12054167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6958;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12054296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12054668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.8098;ERATE=0.0004;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12054670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9138;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12054774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5623;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0007;THETA=0.0010;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 12054908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5654;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12054913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5619;AVGPOST=0.9934;RSQ=0.9906;ERATE=0.0009;THETA=0.0005;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 12055111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5576;AVGPOST=0.9930;RSQ=0.9900;ERATE=0.0008;THETA=0.0023;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 12055125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9986;RSQ=0.3517;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12055291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12055303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12055326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8198;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12055366 . CT C 838 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9152;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12055408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7056;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12055424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0712;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 12055480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12055612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0064;AVGPOST=0.9975;RSQ=0.8368;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12055656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5200;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12055755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12055786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12055892 . T TC 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5391;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12056015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0407;AVGPOST=0.9992;RSQ=0.9908;ERATE=0.0003;THETA=0.0009;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 12056059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12056212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8836;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12056213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0004;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 12056537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12056653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12056712 . AG A 208 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7118;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12057174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5431;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12057284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8902;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12057381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8859;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12057763 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5646;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057786 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0084;AVGPOST=0.9983;RSQ=0.9122;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12057820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5869;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12057847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8189;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12057854 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12057878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7739;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12057880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2272;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0005;THETA=0.0006;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 12058078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6342;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12058117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9268;ERATE=0.0003;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12058283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12058457 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5326;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12058580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9279;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12058657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5836;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12058889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12058890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0372;AVGPOST=0.9993;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 12058950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.3491;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12059166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12059233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.933;LDAF=0.7843;AVGPOST=0.9512;RSQ=0.8925;ERATE=0.0085;THETA=0.0011;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 12059646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0050;AVGPOST=0.9952;RSQ=0.6310;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12059716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8717;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12059761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8633;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12059789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4347;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4519;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12059909 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0228;AVGPOST=0.9991;RSQ=0.9833;ERATE=0.0004;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 12060186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6673;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12060278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9788;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12060648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3533;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0007;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 12060776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12060809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 12060970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12060975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12060981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12061033 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12061201 . AGAG A 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5296;ERATE=0.0013;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12061246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12061273 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3532;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0057;THETA=0.0007;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 12061291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12061374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12061443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3387;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 12061450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12061525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12061534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12061720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 12061791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12061829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12061950 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12062008 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12062043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12062074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12062098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12062218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12062482 rs2308040 A ACTC 85065 PASS INDEL;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.5029;AVGPOST=0.9814;RSQ=0.9723;ERATE=0.0007;THETA=0.0003;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 12062546 . C CCTG 27669 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.4876;AVGPOST=0.9472;RSQ=0.9184;ERATE=0.0184;THETA=0.0006;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 12062549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12062596 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12062609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12062615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12062635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062741 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12062775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12062949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063064 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12063135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12063136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12063198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12063264 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12063287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12063316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12063395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12063427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063473 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0189;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12063512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12063630 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12063720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12063808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12063810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12063855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12063916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12063966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12064084 . AAAG A 163 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6298;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12064211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12064276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12064589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12064864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12064916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12064973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12064984 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065077 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12065140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12065175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12065200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12065236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3579;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 12065266 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.952;LDAF=0.0810;AVGPOST=0.9889;RSQ=0.9449;ERATE=0.0038;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 12065576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1462;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0005;THETA=0.0010;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 12065686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7833;ERATE=0.0005;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12065703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1352;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0005;THETA=0.0012;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 12065706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0457;AVGPOST=0.9970;RSQ=0.9735;ERATE=0.0005;THETA=0.0009;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 12065776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5603;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12065817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12065841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0299;AVGPOST=0.9977;RSQ=0.9657;ERATE=0.0007;THETA=0.0013;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 12065990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.6337;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12065998 . ACTGCCCCAAGCAG A 4729 PASS INDEL;BAVGPOST=0.983;BRSQ=0.706;LDAF=0.0390;AVGPOST=0.9919;RSQ=0.9223;ERATE=0.0006;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 12066025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0261;AVGPOST=0.9975;RSQ=0.9628;ERATE=0.0004;THETA=0.0029;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 12066238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.7860;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12066340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8359;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12066351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0344;AVGPOST=0.9993;RSQ=0.9900;ERATE=0.0004;THETA=0.0009;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 12066482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7068;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12066495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0342;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0016;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 12066537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12066594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12066602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4137;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12066647 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3843;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12066740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7705;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12066861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0310;AVGPOST=0.9950;RSQ=0.9349;ERATE=0.0005;THETA=0.0051;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 12066956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 12067011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7230;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12067117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0321;AVGPOST=0.9983;RSQ=0.9782;ERATE=0.0007;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 12067125 . T TTA 123 PASS INDEL;BAVGPOST=0.977;BRSQ=0.238;LDAF=0.0609;AVGPOST=0.8973;RSQ=0.2555;ERATE=0.0036;THETA=0.0021;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12067190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0308;AVGPOST=0.9977;RSQ=0.9670;ERATE=0.0007;THETA=0.0013;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 12067242 rs112164362 AATT A 78 PASS INDEL;BAVGPOST=0.988;BRSQ=0.508;LDAF=0.0324;AVGPOST=0.9630;RSQ=0.5107;ERATE=0.0063;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 12067349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0227;AVGPOST=0.9987;RSQ=0.9735;ERATE=0.0004;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 12067512 rs76919755 CAG C 7562 PASS INDEL;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0521;AVGPOST=0.9985;RSQ=0.9875;ERATE=0.0004;THETA=0.0008;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 12067664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12067794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0073;AVGPOST=0.9969;RSQ=0.8269;ERATE=0.0006;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12067821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12067916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0035;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12067925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12067957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0137;AVGPOST=0.9987;RSQ=0.9633;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12067981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12068064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7991;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12068092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12068137 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1902;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0024;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 12068150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1261;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0005;THETA=0.0010;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 12068157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.413;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7591;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12068270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1906;AVGPOST=0.9958;RSQ=0.9909;ERATE=0.0008;THETA=0.0005;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 12068285 . C CT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12068342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.883;LDAF=0.0218;AVGPOST=0.9932;RSQ=0.8701;ERATE=0.0005;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 12068358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6363;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12068456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1601;AVGPOST=0.9968;RSQ=0.9907;ERATE=0.0010;THETA=0.0006;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 12068463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.5989;ERATE=0.0007;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12068497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12068576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8925;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12068589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8956;ERATE=0.0004;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12068603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8012;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12068736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6662;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12068754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12068771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9328;ERATE=0.0007;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12068838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8052;ERATE=0.0010;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12068853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12068891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0013;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12068904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.894;LDAF=0.0222;AVGPOST=0.9946;RSQ=0.8981;ERATE=0.0006;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 12069157 . G GA 298 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12069200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0678;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 12069365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8254;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12069403 . AT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8742;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12069484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.835;LDAF=0.0244;AVGPOST=0.9904;RSQ=0.8393;ERATE=0.0013;THETA=0.0019;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 12069517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.543;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0004;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 12069589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12069774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8336;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12069789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9729;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 12069892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7239;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12069896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6812;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12069902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0396;AVGPOST=0.9984;RSQ=0.9839;ERATE=0.0003;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 12069923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12070039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12070069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1693;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0004;THETA=0.0009;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 12070139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12070151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12070229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8772;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12070250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8665;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12070310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8092;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12070346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12070377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12070430 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8331;ERATE=0.0012;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12070556 . GAAGA G 399 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8240;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12070564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12070675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0054;AVGPOST=0.9965;RSQ=0.7732;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12070853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0098;AVGPOST=0.9969;RSQ=0.8876;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12070867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12070934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9502;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12071044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7271;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12071117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12071263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8456;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12071272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12071298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8185;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12071361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1813;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 12071371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6543;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12071414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9129;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12071428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12071501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9441;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12071556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9431;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12071716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5319;AVGPOST=0.9937;RSQ=0.9892;ERATE=0.0014;THETA=0.0003;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 12071735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4394;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12071755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6050;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 12071880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.399;LDAF=0.0082;AVGPOST=0.9888;RSQ=0.4374;ERATE=0.0028;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12072188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8801;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12072208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5287;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12072240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.5283;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12072322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1934;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 12072380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9988;RSQ=0.9575;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12072537 . TGTTCA T 553 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8497;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12072779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12072886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8285;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12073025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0039;AVGPOST=0.9956;RSQ=0.5565;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12073208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8013;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12073299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12073476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9422;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12073538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5919;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12073556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12073604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12073709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0639;AVGPOST=0.9960;RSQ=0.9723;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 12073768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7187;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12073831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9392;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12073877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12073944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12073993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12074007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9103;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12074203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12074242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7788;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12074521 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5342;AVGPOST=0.9944;RSQ=0.9911;ERATE=0.0009;THETA=0.0003;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 12074674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12074682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1415;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 12074913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7835;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12074940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12075097 . GAA G 503 PASS INDEL;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9139;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12075248 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5965;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12075304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8017;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12075390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12075484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12075809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12075811 . T TA 44 PASS INDEL;BAVGPOST=0.988;BRSQ=0.498;LDAF=0.0224;AVGPOST=0.9680;RSQ=0.4432;ERATE=0.0041;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 12075852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 12075863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9523;ERATE=0.0013;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12075939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2582;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 12075993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12076025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5055;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 12076035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12076238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12076271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9632;AVGPOST=0.9977;RSQ=0.9677;ERATE=0.0006;THETA=0.0003;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 12076394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.4902;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12076403 . C CA 1098 PASS INDEL;BAVGPOST=0.866;BRSQ=0.405;LDAF=0.1852;AVGPOST=0.7838;RSQ=0.3971;ERATE=0.0347;THETA=0.0010;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 12076412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8828;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12076447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5017;AVGPOST=0.9936;RSQ=0.9896;ERATE=0.0013;THETA=0.0002;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 12076457 . C CTTCT 1133 PASS INDEL;BAVGPOST=0.989;BRSQ=0.720;LDAF=0.0201;AVGPOST=0.9852;RSQ=0.7254;ERATE=0.0007;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12076565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.4967;AVGPOST=0.9699;RSQ=0.9535;ERATE=0.0020;THETA=0.0005;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 12076662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8824;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12076849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12076894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9291;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12076968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12077090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12077115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0011;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12077127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12077132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12077188 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 12077200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4271;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 12077367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12077463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12077510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0201;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 12077558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12077695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7407;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12077893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12077954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9058;ERATE=0.0004;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12078113 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5425;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=1184;AN=2184 GT:DS:GL:BD 0.54212457 1
1 12078255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0698;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12078284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12078401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0004;THETA=0.0063;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12078451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12078513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12078519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12078543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12078698 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5806;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12078715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5806;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12078717 . A AGG 27142 PASS INDEL;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.5738;AVGPOST=0.9802;RSQ=0.9699;ERATE=0.0043;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 12078717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5161;AVGPOST=0.9960;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 12078733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0067;AVGPOST=0.9986;RSQ=0.9194;ERATE=0.0005;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12078772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9047;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12078785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0194;AVGPOST=0.9986;RSQ=0.9735;ERATE=0.0005;THETA=0.0049;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 12078857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5172;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0006;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 12078892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5809;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0006;THETA=0.0003;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 12078925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5806;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0006;THETA=0.0005;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 12078980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0649;AVGPOST=0.9957;RSQ=0.9786;ERATE=0.0005;THETA=0.0004;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 12078981 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0153;AVGPOST=0.9974;RSQ=0.9408;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 12078997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12079105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 12079118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5811;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12079161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5173;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 12079195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12079196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5813;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0005;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12079271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12079409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12079420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12079440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12079494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12079543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12079578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5169;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0004;THETA=0.0004;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 12079579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9202;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12079601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5813;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12079629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0693;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0004;THETA=0.0007;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 12079649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1247;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12079690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12079730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0079;AVGPOST=0.9987;RSQ=0.9485;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12079766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12079777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12079791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12079819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.248;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.4020;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12079913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5811;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12079967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9235;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12079997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5806;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0016;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 12080041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9175;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12080118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9359;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12080154 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12080185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12080200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5801;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12080273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5163;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 12080279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5639;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12080307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5808;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0006;THETA=0.0009;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 12080359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 12080405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5269;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 12080444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9636;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 12080519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0513;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 12080540 . CAT C 8481 PASS INDEL;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0544;AVGPOST=0.9968;RSQ=0.9780;ERATE=0.0006;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 12080567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0104;AVGPOST=0.9985;RSQ=0.9386;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12080620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0543;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0004;THETA=0.0025;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 12080621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6990;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12080652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6757;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12080745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1667;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 12080782 . T TC 3230 PASS INDEL;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0647;AVGPOST=0.9989;RSQ=0.9910;ERATE=0.0007;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 12080824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0168;AVGPOST=0.9981;RSQ=0.9593;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 12080948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8571;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12080981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8666;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12081016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8049;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12081017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0554;AVGPOST=0.9980;RSQ=0.9856;ERATE=0.0005;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 12081053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1959;AVGPOST=0.9969;RSQ=0.9927;ERATE=0.0006;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 12081244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081291 . AT A 6729 PASS INDEL;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.4466;AVGPOST=0.9871;RSQ=0.9795;ERATE=0.0020;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 12081313 rs11336219 TG T 35754 PASS INDEL;BAVGPOST=0.982;BRSQ=0.983;LDAF=0.4489;AVGPOST=0.9925;RSQ=0.9871;ERATE=0.0021;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 12081315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4499;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 12081347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4499;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 12081391 . TC T 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4503;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 12081499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0429;AVGPOST=0.9988;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 12081559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9538;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12081564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4497;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 12081571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081640 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4128;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0051;AVGPOST=0.9955;RSQ=0.6589;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12081668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8708;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12081754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4500;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 12081761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9440;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12081832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12081889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3107;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 12081926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6031;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12082002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8433;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12082010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4371;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 12082028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4377;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0004;THETA=0.0009;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 12082036 . G GA 367 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9969;RSQ=0.8028;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12082068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7160;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12082080 . AG A 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4684;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12082176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4505;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 12082196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12082227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12082261 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4505;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 12082281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.954;LDAF=0.3864;AVGPOST=0.9800;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 12082301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4507;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 12082304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4155;AVGPOST=0.9962;RSQ=0.9943;ERATE=0.0013;THETA=0.0002;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 12082320 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8930;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12082345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12082415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 12082469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0828;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 12082492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5332;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 12082554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9008;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0005;THETA=0.0002;AC=1968;AN=2184 GT:DS:GL:BD 0.90109891 1
1 12082610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12082712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5628;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12082714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8154;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12082742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0112;AVGPOST=0.9982;RSQ=0.9294;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12083006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1121;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 12083065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3675;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 12083162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6609;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12083198 . G GT 575 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9542;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12083251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0314;AVGPOST=0.9990;RSQ=0.9870;ERATE=0.0004;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 12083252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12083253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4512;AVGPOST=0.9946;RSQ=0.9908;ERATE=0.0033;THETA=0.0003;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 12083429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3697;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 12083700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7963;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12083842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.5576;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12083910 rs58439793 AG A 551 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8807;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12083946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12083970 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1121;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 12083981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4713;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12084026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0101;AVGPOST=0.9988;RSQ=0.9510;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 12084172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12084236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0752;AVGPOST=0.9982;RSQ=0.9887;ERATE=0.0004;THETA=0.0002;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 12084332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12084422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12084457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3729;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 12084577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7457;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12084597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1115;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 12084600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8362;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12084749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.388;LDAF=0.0041;AVGPOST=0.9948;RSQ=0.4953;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12084801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9836;AVGPOST=0.9987;RSQ=0.9737;ERATE=0.0003;THETA=0.0005;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 12084871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0016;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 12084883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7152;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12084925 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8847;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12084950 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6670;ERATE=0.0004;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12085027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9198;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12085049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4676;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12085129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0292;AVGPOST=0.9976;RSQ=0.9705;ERATE=0.0003;THETA=0.0023;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 12085130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0986;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 12085172 . AG A 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4814;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12085235 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0987;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 12085251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0989;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 12085318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6444;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12085344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8741;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12085423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12085465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4429;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12085471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5255;AVGPOST=0.9942;RSQ=0.9906;ERATE=0.0005;THETA=0.0004;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 12085507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12085544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7703;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12085599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0306;AVGPOST=0.9987;RSQ=0.9852;ERATE=0.0003;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 12085601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12085607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1087;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 12085613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0933;AVGPOST=0.9939;RSQ=0.9723;ERATE=0.0006;THETA=0.0006;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 12085651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1000;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0004;THETA=0.0039;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 12085657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8275;ERATE=0.0005;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12085717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7703;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12085735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.957;LDAF=0.4373;AVGPOST=0.9725;RSQ=0.9621;ERATE=0.0095;THETA=0.0009;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 12085780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12086051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0439;AVGPOST=0.9968;RSQ=0.9728;ERATE=0.0004;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 12086100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.607;LDAF=0.0101;AVGPOST=0.9863;RSQ=0.4821;ERATE=0.0041;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 12086158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0052;AVGPOST=0.9965;RSQ=0.7474;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12086227 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1093;AVGPOST=0.9971;RSQ=0.9894;ERATE=0.0004;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 12086260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0043;AVGPOST=0.9960;RSQ=0.6481;ERATE=0.0011;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12086261 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12086467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.577;LDAF=0.0146;AVGPOST=0.9831;RSQ=0.5414;ERATE=0.0053;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12086468 . AT A 419 PASS INDEL;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0062;AVGPOST=0.9956;RSQ=0.6968;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12086488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0400;AVGPOST=0.9968;RSQ=0.9670;ERATE=0.0004;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 12086521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12086695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12086696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6662;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12086765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8980;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 12086900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0168;AVGPOST=0.9983;RSQ=0.9517;ERATE=0.0006;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12087047 rs71736683 CAG C 1185 PASS INDEL;BAVGPOST=0.971;BRSQ=0.622;LDAF=0.0468;AVGPOST=0.9847;RSQ=0.8719;ERATE=0.0006;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 12087148 . AC A 140 PASS INDEL;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8598;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12087224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6999;AVGPOST=0.9955;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 12087340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7001;AVGPOST=0.9953;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 12087350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12087380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12087436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12087462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12087640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12088280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0096;AVGPOST=0.9966;RSQ=0.8570;ERATE=0.0004;THETA=0.0027;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 12088465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0028;AVGPOST=0.9955;RSQ=0.4079;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12088735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6449;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12088952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.643;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7514;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12088985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 12089223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0147;AVGPOST=0.9990;RSQ=0.9775;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 12089390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9554;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12089557 . CG C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12089584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1333;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 12089653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12089767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1722;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0004;THETA=0.0012;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 12089961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0237;AVGPOST=0.9991;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 12090109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6957;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12090203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 12090257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12090508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0069;AVGPOST=0.9966;RSQ=0.8171;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 12090620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8693;ERATE=0.0005;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12090648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12090725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12090805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.8142;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12090947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7574;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12090972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 12091002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7163;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12091051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12091073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 12091095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9971;RSQ=0.9138;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 12091100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9977;RSQ=0.9042;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12091278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12091461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.757;LDAF=0.0086;AVGPOST=0.9978;RSQ=0.8860;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 12091494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7846;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 12091545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4660;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12091584 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1750;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 12091619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5977;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12091644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12091654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12091681 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12091766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 12091798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.570;LDAF=0.0093;AVGPOST=0.9912;RSQ=0.6321;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12091826 rs67257524 TTTA T 64502 PASS INDEL;BAVGPOST=0.996;BRSQ=0.998;LDAF=0.7829;AVGPOST=0.9956;RSQ=0.9907;ERATE=0.0009;THETA=0.0008;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 12091894 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.922;LDAF=0.8375;AVGPOST=0.9639;RSQ=0.9121;ERATE=0.0056;THETA=0.0022;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 12091934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7762;AVGPOST=0.9848;RSQ=0.9687;ERATE=0.0015;THETA=0.0006;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 12091986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.470;LDAF=0.0601;AVGPOST=0.9187;RSQ=0.4138;ERATE=0.0138;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 12092066 . CT C 3542 PASS INDEL;BAVGPOST=0.947;BRSQ=0.087;LDAF=0.9108;AVGPOST=0.8511;RSQ=0.2616;ERATE=0.0082;THETA=0.0004;AC=2123;AN=2184 GT:DS:GL:BD 0.97206962 1
1 12092083 rs35479874 T TC 2177 PASS INDEL;BAVGPOST=0.662;BRSQ=0.459;LDAF=0.6152;AVGPOST=0.7515;RSQ=0.6405;ERATE=0.0087;THETA=0.0003;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 12092084 rs66774075 T TC 960 PASS INDEL;BAVGPOST=0.566;BRSQ=0.311;LDAF=0.6209;AVGPOST=0.6920;RSQ=0.5034;ERATE=0.0156;THETA=0.0004;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 12092090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5693;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12092181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1738;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0006;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 12092194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12092271 . C CT 10974 PASS INDEL;BAVGPOST=0.885;BRSQ=0.764;LDAF=0.6184;AVGPOST=0.8329;RSQ=0.7230;ERATE=0.0653;THETA=0.0015;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 12092298 rs71585752 T TC 59667 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7854;AVGPOST=0.9966;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 12092299 . C CG 12014 PASS INDEL;BAVGPOST=0.898;BRSQ=0.785;LDAF=0.6235;AVGPOST=0.8380;RSQ=0.7275;ERATE=0.0601;THETA=0.0008;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 12092303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5554;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12092359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6947;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 12092389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8422;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12092459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7780;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0023;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12092482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12092519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8684;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 12092570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7785;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12092617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.8922;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 12092816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12092837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0623;AVGPOST=0.9990;RSQ=0.9946;ERATE=0.0003;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 12092838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6365;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12092870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6333;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12092930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7848;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 12092945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12092960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7849;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 12093006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12093024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.2947;AVGPOST=0.9907;RSQ=0.9847;ERATE=0.0006;THETA=0.0011;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 12093290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7778;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12093379 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12093395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9435;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 12093488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4595;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12093500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12093513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8059;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 12093568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7779;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12093585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7748;AVGPOST=0.9892;RSQ=0.9787;ERATE=0.0023;THETA=0.0003;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 12093614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6000;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12093657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7789;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 12093719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7782;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 12093832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12093882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7778;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12093886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12093937 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12093992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7779;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0007;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12094013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8922;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12094058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.946;LDAF=0.0543;AVGPOST=0.9936;RSQ=0.9532;ERATE=0.0004;THETA=0.0002;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 12094143 . TA T 554 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9548;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 12094227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7071;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12094235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12094261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12094367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7784;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 12094457 . AG A 7016 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0863;AVGPOST=0.9982;RSQ=0.9909;ERATE=0.0005;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 12094474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12094532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9144;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12094544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7778;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 12094597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7781;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12094630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7782;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12094752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12094772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12094793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7775;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 12094836 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7769;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 12094847 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7843;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 12094849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9467;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12094926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0625;AVGPOST=0.9991;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 12094966 . TA T 715 PASS INDEL;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9146;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 12094974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7780;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12094994 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5816;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12095018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7478;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 12095057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9761;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12095210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12095247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12095277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 12095287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12095333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7811;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 12095384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6283;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12095502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4660;AVGPOST=0.9952;RSQ=0.9924;ERATE=0.0009;THETA=0.0004;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 12095586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9085;ERATE=0.0004;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 12095589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 12095701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12095822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5175;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 12095874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7744;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 12095978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6391;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 12096005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7778;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 12096045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0