1092
10000
1 201217615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5488;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201217801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6357;ERATE=0.0008;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201217825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9531;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201217939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.545;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4841;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201217987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201217996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4906;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201218014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201218019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8090;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201218038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0053;AVGPOST=0.9967;RSQ=0.7328;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201218087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5991;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201218196 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201218282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201218332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8812;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201218363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8614;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201218461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201218647 . AAAAG A 417 PASS INDEL;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0051;AVGPOST=0.9951;RSQ=0.6207;ERATE=0.0024;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201218731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9648;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201218748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8689;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201218891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5270;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201218946 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201219008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201219065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201219079 . GTTTA G 1086 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0072;AVGPOST=0.9953;RSQ=0.7392;ERATE=0.0017;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201219153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6481;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201219269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9747;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201219406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7065;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201219475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201219503 . C CT 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4801;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201219946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9637;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201219964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201219982 . TTTC T 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0007;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201220225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5298;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201220526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201220556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201220626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7404;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201220660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201220893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5439;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201220908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201220923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6772;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201220970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7099;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201220991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201220999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0134;AVGPOST=0.9944;RSQ=0.8318;ERATE=0.0006;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201221039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9035;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201221055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9460;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201221274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7020;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201221310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201221394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201221457 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4553;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201221521 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5951;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201221528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7376;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201221648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9669;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201221772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8821;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201221814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6284;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201221876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9082;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201221953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201221966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8271;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201222086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9712;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201222135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0178;AVGPOST=0.9978;RSQ=0.9526;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201222138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0152;AVGPOST=0.9991;RSQ=0.9786;ERATE=0.0003;THETA=0.0048;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201222219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0004;THETA=0.0083;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201222263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8162;ERATE=0.0005;THETA=0.0101;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201222301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201222473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.7117;AVGPOST=0.9737;RSQ=0.9569;ERATE=0.0132;THETA=0.0036;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 201222521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201222644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201222703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.6719;AVGPOST=0.9903;RSQ=0.9842;ERATE=0.0013;THETA=0.0086;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 201222710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8264;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201222715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201222816 MERGED_DEL_2_2998 AGCAGGCTCGCTCCCTGGATGGGAAATGAGAACTGGCAGGCATCAATGGTGGTCTGGGCTCTGGAACAGGCAGCAAAATGCCCTGTTGACAGATCTCCACTCACCATCAGATGGACGGTGTCTTCCAAGACCCCAGGGAAGGGCCTGGAGTTTATTTCAGAAGTCTGGGCTCAGCCTCAAGCTAATGAGG A . . SV;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0085;AVGPOST=0.9935;RSQ=0.6933;ERATE=0.0011;THETA=0.0009;CIEND=-21;142;CIPOS=-45;112;END=37522707;HOMLEN=1;HOMSEQ=G;SOURCE=BreakDancer_37521934_37522765;E GT:DS:GL:BD 0.00595238 0
1 201222858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201222863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201222866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6123;AVGPOST=0.9946;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 201222908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0007;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201222938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6336;AVGPOST=0.9943;RSQ=0.9912;ERATE=0.0008;THETA=0.0006;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 201222953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6339;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 201223000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0315;AVGPOST=0.9991;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201223042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=0.9992;RSQ=0.9900;ERATE=0.0003;THETA=0.0018;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201223046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0131;AVGPOST=0.9985;RSQ=0.9668;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201223062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3662;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201223661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.5846;ERATE=0.0005;THETA=0.0064;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201223662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0055;AVGPOST=0.9969;RSQ=0.8075;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201223713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1052;AVGPOST=0.9954;RSQ=0.9837;ERATE=0.0005;THETA=0.0050;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201223717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8746;ERATE=0.0005;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201223765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.883;LDAF=0.0206;AVGPOST=0.9941;RSQ=0.8847;ERATE=0.0005;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201223837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.6418;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=1401;AN=2184 GT:DS:GL:BD 0.64148355 1
1 201223886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6420;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 201223927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1038;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201223948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1038;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201223962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6732;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201224009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8806;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201224135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.7361;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201224255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201224311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201224356 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7140;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201224433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8715;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201224480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201224558 . AT A 253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6732;ERATE=0.0009;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201224660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201224670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4291;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201224710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0319;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201224826 . CA C 2228 PASS INDEL;BAVGPOST=0.993;BRSQ=0.845;LDAF=0.0213;AVGPOST=0.9949;RSQ=0.9105;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201225001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0290;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201225012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2401;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 201225112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.2890;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201225142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225204 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201225239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201225397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9117;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201225589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201225685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7073;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201225739 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5541;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201225971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0339;AVGPOST=0.9980;RSQ=0.9760;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201225973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201225980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201225999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201226091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0309;AVGPOST=0.9985;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201226158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201226192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.577;LDAF=0.0037;AVGPOST=0.9953;RSQ=0.4901;ERATE=0.0022;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201226295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0142;AVGPOST=0.9990;RSQ=0.9708;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201226303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1039;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201226330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5795;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201226394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201226414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0136;AVGPOST=0.9982;RSQ=0.9449;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201226456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0124;AVGPOST=0.9960;RSQ=0.8740;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201226516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201226570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201226573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8491;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201226608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6424;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0008;THETA=0.0003;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 201226609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201226611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9988;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201226643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6421;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0005;THETA=0.0002;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 201226646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5799;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201226655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6421;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0028;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 201226668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2378;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 201226692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201226793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.940;LDAF=0.6868;AVGPOST=0.9760;RSQ=0.9634;ERATE=0.0022;THETA=0.0002;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 201227400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201227472 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201227512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0060;AVGPOST=0.9992;RSQ=0.9448;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201227551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4441;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 201227588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201227602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201227777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201227852 . ATG A 76 PASS INDEL;BAVGPOST=0.989;BRSQ=0.680;LDAF=0.0200;AVGPOST=0.9794;RSQ=0.5716;ERATE=0.0091;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201228055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5680;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201228303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.2003;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201228322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5701;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201228551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0870;AVGPOST=0.9989;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 201228653 . AC A 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201228840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.959;LDAF=0.4107;AVGPOST=0.9741;RSQ=0.9604;ERATE=0.0042;THETA=0.0003;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 201229130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201229174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201229365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0575;AVGPOST=0.9985;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201229860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0581;AVGPOST=0.9977;RSQ=0.9844;ERATE=0.0006;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201229908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201229993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201230155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.808;LDAF=0.0085;AVGPOST=0.9941;RSQ=0.7498;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201230163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201230245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201230328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201230342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201230352 . CTG C 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201230416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5994;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201230591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4251;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 201230592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201230714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201230796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.9048;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201230859 . TCTC T 201 PASS INDEL;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7068;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201231056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201231156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3880;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201231235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0665;AVGPOST=0.9977;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 201231314 . GC G 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5542;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201231339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9992;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201231357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6496;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201231424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8931;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201231437 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3789;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201231452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0315;AVGPOST=0.9982;RSQ=0.9777;ERATE=0.0003;THETA=0.0028;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201231512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.933;LDAF=0.1911;AVGPOST=0.9728;RSQ=0.9351;ERATE=0.0014;THETA=0.0012;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 201231771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201231882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201232030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201232141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201232290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201232366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201232546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6269;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201232594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0134;AVGPOST=0.9984;RSQ=0.9504;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201232616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8938;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201232749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9625;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201232751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9988;RSQ=0.9656;ERATE=0.0005;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201232755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5362;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201232816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.449;LDAF=0.0135;AVGPOST=0.9813;RSQ=0.4679;ERATE=0.0029;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201232921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.256;LDAF=0.0083;AVGPOST=0.9870;RSQ=0.3376;ERATE=0.0011;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201233038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.873;LDAF=0.0617;AVGPOST=0.9567;RSQ=0.7281;ERATE=0.0027;THETA=0.0007;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201233039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0093;AVGPOST=0.9936;RSQ=0.7327;ERATE=0.0007;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201233088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201233320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6540;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201233443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5760;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201233547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201233548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201233598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5222;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201233631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201233894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201234017 . GA G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4028;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201234037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5016;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201234236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.496;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8427;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201234344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6182;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201234359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8363;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201234455 . A AT 1790 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201234616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1506;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 201234652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201234701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6069;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 201234734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7604;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201234889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5360;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201234934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7697;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201234949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201234950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0454;AVGPOST=0.9976;RSQ=0.9800;ERATE=0.0004;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201234965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3020;AVGPOST=0.9976;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 201234982 . T TC 882 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9052;ERATE=0.0005;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201235134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7232;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201235183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201235195 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8643;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201235319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0381;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201235337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.870;LDAF=0.0322;AVGPOST=0.9936;RSQ=0.9319;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201235349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201235412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0959;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0015;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 201235434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.880;LDAF=0.0488;AVGPOST=0.9940;RSQ=0.9482;ERATE=0.0003;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 201235483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9419;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201235612 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201235832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201235926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.1695;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201235965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7357;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201236102 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201236140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201236199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201236219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201236245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6609;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201236365 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5569;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201236474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8881;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201236501 . GAC G 80 PASS INDEL;BAVGPOST=0.994;BRSQ=0.729;LDAF=0.0224;AVGPOST=0.9777;RSQ=0.6112;ERATE=0.0062;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201236533 . ATG A 947 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201236559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8747;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201236635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0020;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201236711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.461;LDAF=0.0181;AVGPOST=0.9774;RSQ=0.5193;ERATE=0.0050;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201236722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0080;AVGPOST=0.9939;RSQ=0.7098;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201236723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4145;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201236953 . T TA 1009 PASS INDEL;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0197;AVGPOST=0.9981;RSQ=0.9593;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201236970 . A AGCT 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.3411;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201237067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201237093 . G GA 830 PASS INDEL;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9555;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201237123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201237274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201237375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201237675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201237680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201237763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201237771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0605;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201237948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201237950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201238034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201238092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201238311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201238340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201238351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0011;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201238393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201238415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0008;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201238554 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201238556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 201238582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201238586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201238677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201238733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201238764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1550;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 201238881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239038 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201239184 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201239356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201239836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9596;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201239874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201240096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8984;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201240201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8756;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201240228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201240314 . G GATGAA 10687 PASS INDEL;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0599;AVGPOST=0.9978;RSQ=0.9861;ERATE=0.0005;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 201240479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0120;AVGPOST=0.9991;RSQ=0.9682;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201240532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9695;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201240552 . GGAAT G 10250 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0440;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201240574 . CTG C 431 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8002;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201240645 rs56958868 C CT 11591 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0468;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201240656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0050;AVGPOST=0.9969;RSQ=0.7790;ERATE=0.0014;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201240727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0004;THETA=0.0011;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201240830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6374;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201240951 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201241177 . GAC G 228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0174;AVGPOST=0.9985;RSQ=0.9651;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201241278 . ACT A 2626 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0189;AVGPOST=0.9977;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201241279 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201241356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201241378 . CACTT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7026;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201241378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5529;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201241384 rs61040088 T TC 5394 PASS INDEL;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0398;AVGPOST=0.9974;RSQ=0.9734;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201241410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4794;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201241631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0057;AVGPOST=0.9938;RSQ=0.5529;ERATE=0.0007;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201241709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0434;AVGPOST=0.9954;RSQ=0.9543;ERATE=0.0009;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 201241720 . T TG 1054 PASS INDEL;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9581;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201241904 . A AT 734 PASS INDEL;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9174;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201241906 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6600;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201241924 . CTTTA C 1772 PASS INDEL;BAVGPOST=0.992;BRSQ=0.891;LDAF=0.0375;AVGPOST=0.9950;RSQ=0.9535;ERATE=0.0004;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201241980 . TTATTAA T 6815 PASS INDEL;BAVGPOST=0.992;BRSQ=0.891;LDAF=0.0374;AVGPOST=0.9952;RSQ=0.9548;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201241982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3935;AVGPOST=0.9918;RSQ=0.9865;ERATE=0.0007;THETA=0.0005;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 201242008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0612;AVGPOST=0.9981;RSQ=0.9887;ERATE=0.0004;THETA=0.0007;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201242044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8827;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201242094 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5726;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201242150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6489;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201242194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8521;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201242351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0605;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201242364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6079;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201242783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.7137;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201242784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1960;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201243033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7799;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201243056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1957;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201243098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0875;AVGPOST=0.9986;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 201243156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8510;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201243226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1957;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201243228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8877;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201243367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1965;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 201243390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201243404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201243421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201243462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201243784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1811;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 201243915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201243936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201243960 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201243968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201244067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4600;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201244150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1970;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0005;THETA=0.0004;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 201244176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.9826;AVGPOST=0.9991;RSQ=0.9782;ERATE=0.0003;THETA=0.0029;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 201244184 . T TG 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6228;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201244228 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.592;LDAF=0.0206;AVGPOST=0.9759;RSQ=0.5718;ERATE=0.0059;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201244383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3913;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201244627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201244785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9816;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 201244848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 201244941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201245008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0352;AVGPOST=0.9978;RSQ=0.9775;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201245170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1963;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201245383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9822;AVGPOST=0.9989;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=2146;AN=2184 GT:DS:GL:BD 0.98260075 1
1 201245394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1793;AVGPOST=0.9934;RSQ=0.9845;ERATE=0.0007;THETA=0.0005;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 201245405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1957;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0010;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201245425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7193;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201245566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5574;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201245581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1839;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 201245695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6266;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 201245717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4913;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201245739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1960;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201245807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0931;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 201245879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201245891 . CT C 251 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7584;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201245904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9105;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201245931 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201245941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9714;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201246004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1955;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0009;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201246199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1693;AVGPOST=0.9934;RSQ=0.9833;ERATE=0.0004;THETA=0.0002;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 201246267 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1697;AVGPOST=0.9926;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 201246268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1957;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201246300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1959;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201246312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1970;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 201246326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1957;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201246372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0206;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201246434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1950;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 201246488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1960;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 201246491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201246589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0340;AVGPOST=0.9983;RSQ=0.9776;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201246694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9580;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201246698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8936;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201246731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201246852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0264;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 201247175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1940;AVGPOST=0.9921;RSQ=0.9818;ERATE=0.0006;THETA=0.0038;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 201247209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.951;LDAF=0.1942;AVGPOST=0.9951;RSQ=0.9877;ERATE=0.0004;THETA=0.0004;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 201247237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3132;AVGPOST=0.9927;RSQ=0.9888;ERATE=0.0004;THETA=0.0005;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 201247345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7986;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201247428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201247488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0206;AVGPOST=0.9984;RSQ=0.9683;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201247722 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1958;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 201247774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201247875 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201247923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0927;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201248013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8710;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201248026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6839;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201248160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4941;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201248182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8449;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201248226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6993;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201248274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5554;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201248306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8724;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201248358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8771;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201248382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.905;LDAF=0.0318;AVGPOST=0.9911;RSQ=0.8960;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201248445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0923;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0012;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201248552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9581;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201248662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7336;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201248795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201248935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8566;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201249263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201249366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201249372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9099;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201249456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0924;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201249515 . TG T 308 PASS INDEL;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8004;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201249651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9397;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201249659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201249700 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5743;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 201249737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201249871 . TAG T 126 PASS INDEL;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6331;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201249895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.930;LDAF=0.5531;AVGPOST=0.9569;RSQ=0.9333;ERATE=0.0061;THETA=0.0005;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 201249910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201249932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201250108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201250270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9462;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201250394 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.892;LDAF=0.0218;AVGPOST=0.9947;RSQ=0.9066;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201250459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5737;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0006;THETA=0.0004;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 201250515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9470;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201250533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8761;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201250534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9169;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201250595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8669;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201250659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0944;AVGPOST=0.9971;RSQ=0.9890;ERATE=0.0003;THETA=0.0039;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201250688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7736;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201250707 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201250827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0107;AVGPOST=0.9992;RSQ=0.9672;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201250835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7973;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201250840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201250863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201250903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0277;AVGPOST=0.9952;RSQ=0.9346;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201250927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8810;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201251258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201251339 . AC A 7386 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0969;AVGPOST=0.9932;RSQ=0.9687;ERATE=0.0018;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 201251411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201251440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201251513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251575 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5351;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.7124;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201251603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9060;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201251626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201251740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201251745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5908;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201251809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.5996;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201251963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.928;LDAF=0.0471;AVGPOST=0.9926;RSQ=0.9476;ERATE=0.0017;THETA=0.0009;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201252001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201252002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201252082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8162;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201252125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201252148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4779;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201252149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201252178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201252248 . T TA 155 PASS INDEL;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0068;AVGPOST=0.9937;RSQ=0.6281;ERATE=0.0024;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201252329 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0947;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201252330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201252466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0223;AVGPOST=0.9968;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201252712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201252784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7774;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201252837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0005;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201252954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.713;LDAF=0.0499;AVGPOST=0.9584;RSQ=0.6491;ERATE=0.0233;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201253347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.896;LDAF=0.0233;AVGPOST=0.9978;RSQ=0.9629;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201253373 . G GA 50 PASS INDEL;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0093;AVGPOST=0.9884;RSQ=0.5030;ERATE=0.0031;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201253398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8717;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201253422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8707;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201253543 . GAGT G 350 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0053;AVGPOST=0.9969;RSQ=0.7856;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201253547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0080;AVGPOST=0.9949;RSQ=0.7356;ERATE=0.0023;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201253604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8414;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201253611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201253671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8596;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201253771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201253780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9387;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201253792 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201253974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201254042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8643;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201254154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6851;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201254246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7007;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201254259 . C CT 519 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8722;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201254313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201254325 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201254629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201254651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201254772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201254924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201254977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201255045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201255107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201255153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201255448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201255742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201255847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201255910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201255939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201256052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201256097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201256267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2811;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 201256302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201256321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9230;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201256449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201256551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201256602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201256629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201256885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201256985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201257100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201257213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201257679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201257778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201257821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201257942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201258036 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201258171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201258250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201258298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2619;AVGPOST=0.9944;RSQ=0.9902;ERATE=0.0005;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 201258388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8833;ERATE=0.0004;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201258516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5776;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201258739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.660;LDAF=0.9411;AVGPOST=0.9338;RSQ=0.5520;ERATE=0.0112;THETA=0.0003;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 201258769 rs34946396 AAAAT A 45448 PASS INDEL;BAVGPOST=0.956;BRSQ=0.665;LDAF=0.8855;AVGPOST=0.8760;RSQ=0.5013;ERATE=0.0176;THETA=0.0004;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 201258814 . GAAGT G 2299 PASS INDEL;BAVGPOST=0.994;BRSQ=0.861;LDAF=0.0273;AVGPOST=0.9936;RSQ=0.9018;ERATE=0.0009;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201258889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.435;LDAF=0.0067;AVGPOST=0.9924;RSQ=0.5575;ERATE=0.0010;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201258943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7787;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201259018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5055;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201259033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.8220;AVGPOST=0.9763;RSQ=0.9537;ERATE=0.0027;THETA=0.0003;AC=1802;AN=2184 GT:DS:GL:BD 0.82509160 1
1 201259046 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0230;AVGPOST=0.9941;RSQ=0.8879;ERATE=0.0009;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201259091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0253;AVGPOST=0.9942;RSQ=0.9038;ERATE=0.0008;THETA=0.0013;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201259092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.806;LDAF=0.0330;AVGPOST=0.9912;RSQ=0.8836;ERATE=0.0009;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201259100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0036;AVGPOST=0.9938;RSQ=0.2844;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201259171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.722;LDAF=0.6455;AVGPOST=0.7968;RSQ=0.6427;ERATE=0.0439;THETA=0.0006;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 201259174 . T TAAC 1138 PASS INDEL;BAVGPOST=0.855;BRSQ=0.487;LDAF=0.1771;AVGPOST=0.8277;RSQ=0.5211;ERATE=0.0195;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 201259174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0079;AVGPOST=0.9954;RSQ=0.7881;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201259699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0112;AVGPOST=0.9956;RSQ=0.8470;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201259745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5153;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201259763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0047;AVGPOST=0.9926;RSQ=0.4688;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201259774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6825;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201259826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0228;AVGPOST=0.9962;RSQ=0.9311;ERATE=0.0007;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201259853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.583;LDAF=0.0055;AVGPOST=0.9974;RSQ=0.8188;ERATE=0.0007;THETA=0.0036;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201259865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.5801;AVGPOST=0.9653;RSQ=0.9501;ERATE=0.0033;THETA=0.0009;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 201259874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201259902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6872;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201259948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201259976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201260135 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9218;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 201260148 . T TTTC 1237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0217;AVGPOST=0.9980;RSQ=0.9608;ERATE=0.0004;THETA=0.0015;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201260209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0135;AVGPOST=0.9981;RSQ=0.9396;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201260275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201260406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8469;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201260556 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2928;AVGPOST=0.9931;RSQ=0.9877;ERATE=0.0010;THETA=0.0002;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 201260570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201260660 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4697;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201260708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9553;AVGPOST=0.9983;RSQ=0.9840;ERATE=0.0006;THETA=0.0005;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 201260718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201260796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9287;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201260877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201260886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201260986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201261004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9301;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201261103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201261126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9204;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201261172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201261284 . GA G 4464 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9984;RSQ=0.9731;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201261287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9467;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0004;THETA=0.0001;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 201261289 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201261316 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9974;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201261364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0245;AVGPOST=0.9991;RSQ=0.9861;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201261476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8107;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 201261480 . CT C 525 PASS INDEL;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0106;AVGPOST=0.9916;RSQ=0.6781;ERATE=0.0027;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201261490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6900;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201261554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9357;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201261562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6848;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201261595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.814;LDAF=0.0099;AVGPOST=0.9952;RSQ=0.7957;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201261709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.537;LDAF=0.0082;AVGPOST=0.9911;RSQ=0.5982;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201261712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4796;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201261713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201261816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0250;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201261907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3641;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201261923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0866;AVGPOST=0.9986;RSQ=0.9931;ERATE=0.0004;THETA=0.0006;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 201262008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0273;AVGPOST=0.9977;RSQ=0.9671;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201262071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262236 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6792;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201262262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201262350 . TA T 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9152;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201262353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5098;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201262472 . CAAG C 3174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0263;AVGPOST=0.9974;RSQ=0.9572;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201262510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0486;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 201262520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5306;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0182;AVGPOST=0.9983;RSQ=0.9696;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201262647 . CAT C 59 PASS INDEL;BAVGPOST=0.991;BRSQ=0.550;LDAF=0.0177;AVGPOST=0.9778;RSQ=0.5047;ERATE=0.0031;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201262794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0137;AVGPOST=0.9961;RSQ=0.8914;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201262811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9990;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201262854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5386;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201262957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0246;AVGPOST=0.9988;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201262961 . A AT 384 PASS INDEL;BAVGPOST=0.985;BRSQ=0.589;LDAF=0.0297;AVGPOST=0.9622;RSQ=0.4704;ERATE=0.0059;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201263075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.5532;AVGPOST=0.9905;RSQ=0.9849;ERATE=0.0011;THETA=0.0005;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 201263277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0120;AVGPOST=0.9974;RSQ=0.9097;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201263439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0066;AVGPOST=0.9953;RSQ=0.7198;ERATE=0.0008;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201263495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2455;AVGPOST=0.9965;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 201263547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5025;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201263678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201263694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7985;AVGPOST=0.9951;RSQ=0.9885;ERATE=0.0008;THETA=0.0010;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 201263699 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5530;AVGPOST=0.9961;RSQ=0.9935;ERATE=0.0009;THETA=0.0003;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 201263813 . AC A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201263969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.5728;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201264068 rs112943319 A ATATCTG 67861 PASS INDEL;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.5444;AVGPOST=0.9685;RSQ=0.9518;ERATE=0.0050;THETA=0.0005;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 201264077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.625;LDAF=0.0146;AVGPOST=0.9856;RSQ=0.6312;ERATE=0.0021;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201264084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201264119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0031;AVGPOST=0.9958;RSQ=0.4614;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201264127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201264262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2353;AVGPOST=0.9955;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 201264293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9970;RSQ=0.8999;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201264498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.604;LDAF=0.0099;AVGPOST=0.9930;RSQ=0.7484;ERATE=0.0010;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201264588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5561;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201264598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9717;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201264695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9980;RSQ=0.8594;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201264750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9740;ERATE=0.0003;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201264900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3957;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201264921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=0.9959;RSQ=0.8928;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201265043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5407;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0006;THETA=0.0013;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 201265229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6645;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201265264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7302;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201265278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7079;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201265321 . GCT G 267 PASS INDEL;BAVGPOST=0.987;BRSQ=0.757;LDAF=0.0262;AVGPOST=0.9898;RSQ=0.8553;ERATE=0.0005;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201265506 . CTCT C 7276 PASS INDEL;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0404;AVGPOST=0.9925;RSQ=0.9314;ERATE=0.0006;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201265507 . GAT G 379 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0144;AVGPOST=0.9981;RSQ=0.9451;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201265526 . ATC A 2858 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9705;ERATE=0.0004;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201265527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201265750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201265782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.9070;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201265814 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7228;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201266029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201266119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201266140 . CTG C 54 PASS INDEL;BAVGPOST=0.995;BRSQ=0.702;LDAF=0.0160;AVGPOST=0.9850;RSQ=0.6078;ERATE=0.0074;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201266162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5407;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 201266378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201266386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7247;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201266438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201266502 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.7207;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201266568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9634;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201266586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201266667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5314;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201266779 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201266915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8012;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201267193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5299;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0005;THETA=0.0004;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 201267262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5044;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201267328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.405;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7791;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201267332 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0021;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201267364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6164;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201267417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.696;LDAF=0.0056;AVGPOST=0.9977;RSQ=0.8214;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201267568 rs11447675 C CA 18746 PASS INDEL;BAVGPOST=0.931;BRSQ=0.867;LDAF=0.4943;AVGPOST=0.8821;RSQ=0.8195;ERATE=0.0246;THETA=0.0004;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 201267634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201267706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201267733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201267764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7910;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201267841 . CT C 1591 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9988;RSQ=0.9769;ERATE=0.0005;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201268149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.670;LDAF=0.0061;AVGPOST=0.9942;RSQ=0.6101;ERATE=0.0011;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201268170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7465;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201268404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6379;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201268432 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7750;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201268689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201268704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201268708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0742;AVGPOST=0.9974;RSQ=0.9875;ERATE=0.0004;THETA=0.0012;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 201268810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201268961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2679;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 201269168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6161;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 201269182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3282;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 201269244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201269252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201269475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2954;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0019;THETA=0.0045;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 201269486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201269537 rs111464029 AAC A 1519 PASS INDEL;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9654;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201269572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201269622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201269640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6602;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201269660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8961;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201269702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201269777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9387;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201269837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0010;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201269881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201270069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201270249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201270255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7760;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201270275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0261;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201270318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6518;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201270371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0598;AVGPOST=0.9918;RSQ=0.9447;ERATE=0.0013;THETA=0.0059;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201270582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8135;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201270639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0076;AVGPOST=0.9963;RSQ=0.8109;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201270640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.473;LDAF=0.0438;AVGPOST=0.9588;RSQ=0.5919;ERATE=0.0015;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201270715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0184;AVGPOST=0.9816;RSQ=0.6449;ERATE=0.0010;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201270793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.931;LDAF=0.2718;AVGPOST=0.9825;RSQ=0.9649;ERATE=0.0014;THETA=0.0008;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 201271016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0217;AVGPOST=0.9887;RSQ=0.7929;ERATE=0.0011;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201271047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4360;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201271153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7882;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201271197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7369;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201271376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9994;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 201271418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201271441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0422;AVGPOST=0.9987;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 201271453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201271486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2920;AVGPOST=0.9912;RSQ=0.9844;ERATE=0.0004;THETA=0.0007;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 201271528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7930;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201271635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0535;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201271645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201271656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0417;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 201271672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201271704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201271789 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9121;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201271817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8702;ERATE=0.0004;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201271818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0637;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 201271848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9734;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201271919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201271923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201272128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201272151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201272174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.9913;AVGPOST=0.9987;RSQ=0.9386;ERATE=0.0004;THETA=0.0012;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 201272209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201272220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0314;AVGPOST=0.9989;RSQ=0.9862;ERATE=0.0004;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201272266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201272487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201272571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0021;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201272680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201272726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201272734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201272769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0436;AVGPOST=0.9985;RSQ=0.9837;ERATE=0.0005;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201272832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9536;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201272840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0146;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201272876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201272930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201272955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0442;AVGPOST=0.9990;RSQ=0.9906;ERATE=0.0004;THETA=0.0007;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201272965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0227;AVGPOST=0.9990;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201273066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201273107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201273139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201273196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201273255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0204;AVGPOST=0.9985;RSQ=0.9752;ERATE=0.0002;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201273383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9583;ERATE=0.0004;THETA=0.0031;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201273394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0424;AVGPOST=0.9990;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 201273410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6273;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201273411 . G GC 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0026;AVGPOST=0.9958;RSQ=0.3924;ERATE=0.0006;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0431;AVGPOST=0.9991;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201273453 . C CA 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3699;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8597;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201273520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0140;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201273524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9573;ERATE=0.0002;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201273733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5503;AVGPOST=0.9900;RSQ=0.9860;ERATE=0.0010;THETA=0.0008;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 201273890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201273898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201273955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201274087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7064;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201274585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.757;LDAF=0.0118;AVGPOST=0.9935;RSQ=0.7776;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201274609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.629;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.5524;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201274656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0072;AVGPOST=0.9937;RSQ=0.6381;ERATE=0.0007;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201274682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5706;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201274683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.5401;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201274734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201274895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201274898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6744;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201274958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.8959;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201275005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5765;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201275248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.4859;AVGPOST=0.9854;RSQ=0.9793;ERATE=0.0012;THETA=0.0006;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 201275250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0275;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201275515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201275705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0002;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201276069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8023;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201276154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276195 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9229;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201276338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201276365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8734;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201276451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7789;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6867;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201276533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201276560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8845;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201276582 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9687;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201276652 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6381;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201276850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201276898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8145;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201277243 . GT G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5534;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201277273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5345;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277285 rs3075911 CCTGA C 22604 PASS INDEL;BAVGPOST=0.986;BRSQ=0.963;LDAF=0.1175;AVGPOST=0.9868;RSQ=0.9488;ERATE=0.0005;THETA=0.0002;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201277380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201277730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201277759 . CCT C 4196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0188;AVGPOST=0.9984;RSQ=0.9664;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201277768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201277810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5012;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0008;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 201277916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201278134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201278186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9709;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201278245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3663;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201278894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4206;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0010;THETA=0.0007;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 201278921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7247;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201278922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.938;LDAF=0.0340;AVGPOST=0.9934;RSQ=0.9279;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201279041 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201279049 . G GTT 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201279124 . G GA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201279130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4047;AVGPOST=0.9952;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 201279292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.5545;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 201279310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5510;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201279400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201279473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0146;AVGPOST=0.9971;RSQ=0.9189;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201279617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7727;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201279868 . T TA 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4213;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201279911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201279953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9182;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201279954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0261;AVGPOST=0.9984;RSQ=0.9746;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201280071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201280256 . T TC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7908;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201280293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9875;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 201280448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0492;AVGPOST=0.9987;RSQ=0.9884;ERATE=0.0003;THETA=0.0022;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201280656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201280659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201280661 . C CG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201280707 . C CT 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5347;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201280749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201280769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201280812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8946;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201280824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9574;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201280890 rs56653741 A AG 66347 PASS INDEL;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.5751;AVGPOST=0.9842;RSQ=0.9774;ERATE=0.0035;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 201281082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201281220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9442;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201281484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201281506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5038;AVGPOST=0.9992;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 201281605 . GA G 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.509;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4132;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 201281744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0050;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201281756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201281828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201281920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201282192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9645;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201282418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7361;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201282507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3973;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 201282596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3981;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 201282610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0389;AVGPOST=0.9986;RSQ=0.9891;ERATE=0.0003;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201282613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7074;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201282643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201282648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201282736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201282797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8466;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201283056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201283588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.923;LDAF=0.1530;AVGPOST=0.9874;RSQ=0.9629;ERATE=0.0004;THETA=0.0006;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 201283600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201283612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0957;AVGPOST=0.9979;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201283662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4427;AVGPOST=0.9948;RSQ=0.9919;ERATE=0.0005;THETA=0.0004;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 201283667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5377;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 201283721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5465;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201283742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7670;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201283904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6383;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201284039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201284083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9129;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201284156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8543;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201284176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6879;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201284217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0210;AVGPOST=0.9884;RSQ=0.7760;ERATE=0.0009;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201284422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0105;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201284489 . TTC T 8 PASS INDEL;BAVGPOST=0.996;BRSQ=0.447;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3642;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201284510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201284624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0189;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201285034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201285173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201285641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201285646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201285677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201285680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6320;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201285914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9747;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201285989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9416;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201286151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2985;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 201286443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4411;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201286505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201286583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201286615 . C CTAA 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5857;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201286631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3153;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0005;THETA=0.0007;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 201286670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6691;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201286859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9604;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201286936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201286957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9243;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201287061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8250;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201287193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7538;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201287473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5256;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201287620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201287734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9387;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201287765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201287928 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6326;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201288182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0002;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201288481 . AT A 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201288554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.4229;ERATE=0.0002;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201288574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201288607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0002;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201288735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201288768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201288790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201288938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.725;LDAF=0.0161;AVGPOST=0.9920;RSQ=0.8171;ERATE=0.0005;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201289285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6967;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201289483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2315;AVGPOST=0.9959;RSQ=0.9903;ERATE=0.0003;THETA=0.0007;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 201289523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6294;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201289563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6835;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201289886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201289952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201289990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0091;AVGPOST=0.9981;RSQ=0.9207;ERATE=0.0002;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201290222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201290340 . AAG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201290403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7749;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201290417 . A AAT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201290855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0708;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0002;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 201290987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201290991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201291181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201291218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201291290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201291296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5565;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201291352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201291377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7034;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201291562 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6138;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201291619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201291651 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6860;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201291822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5312;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201291871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1210;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 201292056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6189;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201292121 . C CAGTGGT 1566 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9646;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201292151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0002;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201292190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.4043;AVGPOST=0.9937;RSQ=0.9903;ERATE=0.0004;THETA=0.0008;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 201292253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201292257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8703;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201292362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8602;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201292391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7879;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201292500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6001;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201292610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201292630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0136;AVGPOST=0.9974;RSQ=0.9331;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201292687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7757;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201292922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201293144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9196;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201293323 . T TA 41 PASS INDEL;BAVGPOST=0.989;BRSQ=0.520;LDAF=0.0190;AVGPOST=0.9812;RSQ=0.5998;ERATE=0.0026;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201293412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201293526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201293640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201293717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0033;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201293781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201293866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201293907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7890;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201294073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201294100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201294339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201294349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201294448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201294528 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201294571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8377;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201294623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6203;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 201294793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7910;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201294868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.574;LDAF=0.0136;AVGPOST=0.9894;RSQ=0.7071;ERATE=0.0006;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201294940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0074;AVGPOST=0.9960;RSQ=0.8198;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201294956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9988;RSQ=0.9622;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201294967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0354;AVGPOST=0.9978;RSQ=0.9711;ERATE=0.0005;THETA=0.0012;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201295068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0098;AVGPOST=0.9971;RSQ=0.8642;ERATE=0.0007;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201295130 . TC T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201295264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9307;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201295363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201295379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9851;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201295398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8206;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201295422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201295438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9262;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201295474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201295492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201295563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8324;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201295739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6533;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201295902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201295931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9545;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201295988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201296015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7054;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201296207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201296274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0357;AVGPOST=0.9963;RSQ=0.9630;ERATE=0.0005;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201296511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201296527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201296643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201296704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1386;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 201296725 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201296751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201296753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201296788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6128;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 201296802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201296816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8750;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 201296857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201296977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9724;ERATE=0.0008;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201297021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201297144 rs113857417 CT C 122 PASS INDEL;BAVGPOST=0.967;BRSQ=0.315;LDAF=0.0559;AVGPOST=0.9195;RSQ=0.4126;ERATE=0.0143;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201297186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6468;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201297268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8521;AVGPOST=0.9940;RSQ=0.9828;ERATE=0.0005;THETA=0.0004;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 201297329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8612;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201297420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201297466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0002;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201297529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9086;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0006;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 201297552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201297641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201297646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9086;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 201297652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201297814 . A AAGCAGTTAAAAGTT 10651 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201297833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8821;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201297858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8700;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201297926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201297929 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6208;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 201297972 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201298024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6211;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201298050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.651;LDAF=0.0126;AVGPOST=0.9930;RSQ=0.7597;ERATE=0.0013;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201298072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0148;AVGPOST=0.9987;RSQ=0.9593;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201298112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0336;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0002;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201298257 rs111632142 TG T 27721 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1963;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0006;THETA=0.0006;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 201298352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201298370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201298437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0791;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201298438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201298526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1939;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0007;THETA=0.0024;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 201298537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201298593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0856;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201298667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1142;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 201298766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201298922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201299052 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7979;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201299101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0858;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0002;THETA=0.0018;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201299167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201299417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 201299445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8894;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201299702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201299766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201299876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0676;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 201299927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201300121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7882;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201300209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201300281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201300298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1966;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 201300331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1737;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 201300340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201300375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201300413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3702;AVGPOST=0.9999;RSQ=0.9999;ERATE=0.0002;THETA=0.0010;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 201300519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201300543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1883;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 201300549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0377;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 201300694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5359;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201300782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201300828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1883;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0012;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 201300865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201300937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201300972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7629;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201301017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9500;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201301099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9759;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201301256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201301277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201301323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0792;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0014;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201301414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5062;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0259;AVGPOST=0.9989;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201301652 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1164;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 201301804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201301881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9987;RSQ=0.9473;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201302007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201302065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1893;AVGPOST=0.9972;RSQ=0.9925;ERATE=0.0007;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 201302119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1939;AVGPOST=0.9809;RSQ=0.9565;ERATE=0.0045;THETA=0.0006;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 201302146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9557;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201302225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3703;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 201302258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7460;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201302515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201302516 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6511;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201302668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9266;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201302734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1798;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 201302835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0070;AVGPOST=0.9984;RSQ=0.8994;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201302884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6987;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201302922 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1882;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 201303042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9986;RSQ=0.9585;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201303081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0855;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0004;THETA=0.0008;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201303132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9317;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201303147 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201303170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201303171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0856;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201303244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7007;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201303245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6172;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201303282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8629;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201303309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201303348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9727;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201303435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201303626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201303657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201303708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201303816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201303967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201304029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201304053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201304165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201304328 rs113892636 C CTT 4047 PASS INDEL;BAVGPOST=0.967;BRSQ=0.799;LDAF=0.0832;AVGPOST=0.9793;RSQ=0.9057;ERATE=0.0023;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 201304412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0081;AVGPOST=0.9981;RSQ=0.8992;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201304491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.412;LDAF=0.0099;AVGPOST=0.9876;RSQ=0.5110;ERATE=0.0010;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201304574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0117;AVGPOST=0.9949;RSQ=0.8177;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201304615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.913;LDAF=0.1045;AVGPOST=0.9809;RSQ=0.9287;ERATE=0.0019;THETA=0.0006;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 201304667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0962;AVGPOST=0.9977;RSQ=0.9899;ERATE=0.0006;THETA=0.0007;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 201304707 . C CG 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201304713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2059;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0005;THETA=0.0007;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 201304734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201304758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0822;AVGPOST=0.9974;RSQ=0.9874;ERATE=0.0004;THETA=0.0007;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201304782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1033;AVGPOST=0.9914;RSQ=0.9671;ERATE=0.0018;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 201305072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6769;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201305117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0950;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201305257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8064;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201305731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1035;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201305771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6248;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201305960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6222;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201305992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201306057 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201306087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1042;AVGPOST=0.9969;RSQ=0.9889;ERATE=0.0018;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 201306116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9172;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201306187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201306271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201306278 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201306320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6752;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201306504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201306655 . GTTCT G 1508 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201306748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0054;AVGPOST=0.9947;RSQ=0.6334;ERATE=0.0007;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201306946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0221;AVGPOST=0.9989;RSQ=0.9769;ERATE=0.0005;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201307035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0087;AVGPOST=0.9985;RSQ=0.9225;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201307367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7929;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201307496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9327;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201307544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201307573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0228;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201307577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201307613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201307634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201307665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8956;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201307720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201307742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8994;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201307927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201307948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9514;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201308031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201308185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.513;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201308233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0673;AVGPOST=0.9984;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 201308234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201308372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0921;AVGPOST=0.9978;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 201308378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9977;RSQ=0.9084;ERATE=0.0006;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201308498 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0283;AVGPOST=0.9990;RSQ=0.9845;ERATE=0.0003;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201308766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.957;LDAF=0.0758;AVGPOST=0.9971;RSQ=0.9838;ERATE=0.0004;THETA=0.0010;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 201308768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5825;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201308883 . CTAATATCCAGA C 610 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.8994;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201309010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201309054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201309082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201309109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201309146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201309191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.726;LDAF=0.0173;AVGPOST=0.9917;RSQ=0.7963;ERATE=0.0010;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201309243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.962;LDAF=0.6898;AVGPOST=0.9729;RSQ=0.9585;ERATE=0.0046;THETA=0.0005;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 201309259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.3143;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201309326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.476;LDAF=0.0419;AVGPOST=0.9563;RSQ=0.6066;ERATE=0.0012;THETA=0.0034;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201309354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.413;LDAF=0.9023;AVGPOST=0.8569;RSQ=0.3583;ERATE=0.0113;THETA=0.0016;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 201309422 rs59051631 C CAAAAA 2114 PASS INDEL;BAVGPOST=0.570;BRSQ=0.226;LDAF=0.6192;AVGPOST=0.6372;RSQ=0.3493;ERATE=0.0484;THETA=0.0023;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 201309497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9264;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201309667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.6437;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201309721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201309869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5973;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201309939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6962;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201309947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7006;AVGPOST=0.9943;RSQ=0.9898;ERATE=0.0005;THETA=0.0010;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 201309949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8993;AVGPOST=0.9978;RSQ=0.9902;ERATE=0.0005;THETA=0.0007;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 201310278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8916;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201310438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201310475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201310572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0033;AVGPOST=0.9951;RSQ=0.4485;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201310725 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201310744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6220;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201310788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0434;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201310887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201310888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201310955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0475;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0013;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 201311000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7020;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201311050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201311064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7956;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201311206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8416;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201311284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9216;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201311356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201311459 . AGCC A 173 PASS INDEL;BAVGPOST=0.996;BRSQ=0.551;LDAF=0.0114;AVGPOST=0.9845;RSQ=0.4231;ERATE=0.0030;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201311659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.901;LDAF=0.0501;AVGPOST=0.9715;RSQ=0.7840;ERATE=0.0033;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201311663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6530;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201311849 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8497;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201311930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9861;AVGPOST=0.9988;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 201312070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8187;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201312092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201312147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201312259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0007;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201312362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201312390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201312719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7635;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201312734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201312793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7252;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201312805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201312806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201312927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8715;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201313072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0071;AVGPOST=0.9969;RSQ=0.8456;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201313080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201313108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0004;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201313147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9142;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201313173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4808;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201313268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6441;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201313405 . AT A 1065 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0116;AVGPOST=0.9968;RSQ=0.9031;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201313468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201313579 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0721;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 201313651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1826;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 201313672 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5658;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201313717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.9870;AVGPOST=0.9978;RSQ=0.9220;ERATE=0.0004;THETA=0.0004;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 201313764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201313808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201313886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5936;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201314056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8632;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201314126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201314154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.864;LDAF=0.0171;AVGPOST=0.9957;RSQ=0.9040;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201314215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0146;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201314402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201314513 . A AT 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6318;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201314669 . G GA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5847;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201314748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9993;RSQ=0.9764;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201314800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201314834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0439;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201314919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4911;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315164 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5849;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9380;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201315500 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3911;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 201315713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9497;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201315759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3902;AVGPOST=0.9963;RSQ=0.9950;ERATE=0.0007;THETA=0.0007;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201315764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7252;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201315794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5256;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5804;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201315802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201315880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3918;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 201315914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1158;AVGPOST=0.9983;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 201316092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201316177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4394;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201316275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3919;AVGPOST=0.9950;RSQ=0.9935;ERATE=0.0009;THETA=0.0012;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 201316293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201316334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.8314;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201316360 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3932;AVGPOST=0.9948;RSQ=0.9927;ERATE=0.0009;THETA=0.0008;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 201316445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4776;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201316474 . GC G 305 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8284;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201316512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201316652 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0026;AVGPOST=0.9960;RSQ=0.3684;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201316766 rs34508533 C CA 16506 PASS INDEL;BAVGPOST=0.978;BRSQ=0.967;LDAF=0.3834;AVGPOST=0.9693;RSQ=0.9575;ERATE=0.0037;THETA=0.0007;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 201316768 . AAT A 7959 PASS INDEL;BAVGPOST=0.937;BRSQ=0.896;LDAF=0.3867;AVGPOST=0.8536;RSQ=0.7845;ERATE=0.0330;THETA=0.0007;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 201316773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201316811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.6045;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201317027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201317047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5828;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201317122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1834;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0003;THETA=0.0028;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 201317209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201317230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0442;AVGPOST=0.9991;RSQ=0.9909;ERATE=0.0004;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201317354 . G GT 33 PASS INDEL;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6043;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201317399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8211;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201317455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201317486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8814;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201317605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9134;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201317655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4853;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201317658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5884;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201317681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9387;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201317791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0068;AVGPOST=0.9981;RSQ=0.8922;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201317851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8684;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201317875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201317900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0010;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201317946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9150;ERATE=0.0003;THETA=0.0033;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201317986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8298;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201318156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.775;LDAF=0.0180;AVGPOST=0.9932;RSQ=0.8562;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201318219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201318281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3872;AVGPOST=0.9924;RSQ=0.9897;ERATE=0.0012;THETA=0.0005;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 201318358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5198;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201318612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6742;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201318625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6835;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201318663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9045;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201318869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0189;AVGPOST=0.9991;RSQ=0.9801;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201318949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201319055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6298;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201319117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6576;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201319121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201319271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201319321 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201319685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5324;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201319790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6234;AVGPOST=0.9952;RSQ=0.9922;ERATE=0.0008;THETA=0.0006;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 201319930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6463;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201319955 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0040;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201320044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9077;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201320073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201320124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.9154;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201320142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4430;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201320227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0158;AVGPOST=0.9970;RSQ=0.9279;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201320237 . C CT 517 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9975;RSQ=0.8870;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201320296 . GC G 161 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4615;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201320307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5654;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201320376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.8258;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201320515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8609;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201320539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0118;AVGPOST=0.9965;RSQ=0.8888;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201320677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.6554;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201320784 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201320794 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4827;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0011;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 201320834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9979;RSQ=0.9515;ERATE=0.0003;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201320872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8387;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201320916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201321261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201321277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201321378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201321402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0678;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 201321466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.0982;AVGPOST=0.9908;RSQ=0.9638;ERATE=0.0003;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 201321470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0677;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0004;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 201321620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201321703 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201321708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0453;AVGPOST=0.9953;RSQ=0.9573;ERATE=0.0007;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201321766 . C CACACAT 12249 PASS INDEL;BAVGPOST=0.772;BRSQ=0.545;LDAF=0.4218;AVGPOST=0.7557;RSQ=0.5422;ERATE=0.1108;THETA=0.0003;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 201321789 rs10637706 CACAT C 38608 PASS INDEL;BAVGPOST=0.870;BRSQ=0.405;LDAF=0.8134;AVGPOST=0.7868;RSQ=0.4050;ERATE=0.0626;THETA=0.0003;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 201321793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.887;LDAF=0.0965;AVGPOST=0.9543;RSQ=0.8143;ERATE=0.0128;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201321832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7258;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201321852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0525;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 201322024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2380;AVGPOST=0.9938;RSQ=0.9875;ERATE=0.0005;THETA=0.0002;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 201322042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9013;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201322055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6387;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201322179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201322204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201322363 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5218;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201322446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201322453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4845;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0008;THETA=0.0002;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 201322470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0138;AVGPOST=0.9977;RSQ=0.9235;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201322499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201322504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6010;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201322530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201322633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9992;RSQ=0.9685;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201322721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5179;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201322805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8936;ERATE=0.0009;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201322850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1052;AVGPOST=0.9981;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 201322914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0995;AVGPOST=0.9974;RSQ=0.9895;ERATE=0.0004;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 201322940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4829;AVGPOST=0.9937;RSQ=0.9906;ERATE=0.0023;THETA=0.0004;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 201323006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201323160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9975;RSQ=0.9675;ERATE=0.0004;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201323180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7431;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201323191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201323225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201323287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6000;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201323308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0795;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201323376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201323474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201323489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201323499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201323562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201323635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201323637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201323793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201323838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201323855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9112;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201323871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201323928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9166;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201323947 . GTCC G 870 PASS INDEL;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9597;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201323980 . CCTTT C 399 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9580;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201324090 . CTTTCT C 1648 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9464;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201324091 . A AT 252 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0055;AVGPOST=0.9956;RSQ=0.6941;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201324122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201324234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0281;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201324241 . CA C 4775 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0581;AVGPOST=0.9985;RSQ=0.9889;ERATE=0.0003;THETA=0.0009;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201324360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.6464;AVGPOST=0.9852;RSQ=0.9777;ERATE=0.0017;THETA=0.0008;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 201324501 rs77088063 A AG 17704 PASS INDEL;BAVGPOST=0.849;BRSQ=0.716;LDAF=0.4779;AVGPOST=0.8210;RSQ=0.7129;ERATE=0.0510;THETA=0.0006;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 201324645 . AAAG A 910 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0131;AVGPOST=0.9980;RSQ=0.9322;ERATE=0.0006;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201324654 rs72476365 GAA G 851 PASS INDEL;BAVGPOST=0.974;BRSQ=0.606;LDAF=0.0560;AVGPOST=0.9387;RSQ=0.5128;ERATE=0.0159;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201324685 . GAA G 89 PASS INDEL;BAVGPOST=0.978;BRSQ=0.233;LDAF=0.1024;AVGPOST=0.8546;RSQ=0.3946;ERATE=0.0078;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201324693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201324852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7929;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201324977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201325002 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8579;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201325084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8042;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201325161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201325195 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201325249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201325264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9245;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201325270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201325316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201325576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201325624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201325653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201325684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201325685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0579;AVGPOST=0.9986;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201325723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201325724 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201325770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201325995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9746;ERATE=0.0004;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201326402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7500;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201326476 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8545;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201326523 . GACA G 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5694;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201326536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0311;AVGPOST=0.9978;RSQ=0.9737;ERATE=0.0005;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201326610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8963;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201326641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201326686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201326759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8711;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201326813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2940;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 201326889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201326945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9286;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201327129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9468;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0004;THETA=0.0025;AC=2068;AN=2184 GT:DS:GL:BD 0.94688642 1
1 201327140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201327319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7414;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201327322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201327446 . CT C 1579 PASS INDEL;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0104;AVGPOST=0.9981;RSQ=0.9220;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201327576 . TA T 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8097;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201327796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.0777;AVGPOST=0.9973;RSQ=0.9877;ERATE=0.0003;THETA=0.0010;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 201327854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201328059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6691;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 201328113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6651;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 201328143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6246;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201328145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201328400 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7048;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201328514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4793;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201328788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2245;AVGPOST=0.9959;RSQ=0.9910;ERATE=0.0004;THETA=0.0008;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 201328802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9306;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201328875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201328974 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201328986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9709;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201329015 . AC A 502 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8675;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201329105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8851;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201329114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201329152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6270;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201329242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9970;RSQ=0.9721;ERATE=0.0004;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201329251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201329315 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201329617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0005;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201329694 . A AGT 493 PASS INDEL;BAVGPOST=0.933;BRSQ=0.432;LDAF=0.0736;AVGPOST=0.9163;RSQ=0.5356;ERATE=0.0141;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 201329720 rs34666976 G GAC 48051 PASS INDEL;BAVGPOST=0.977;BRSQ=0.957;LDAF=0.4734;AVGPOST=0.9869;RSQ=0.9788;ERATE=0.0010;THETA=0.0004;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 201329721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201329747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201329780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201329873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9973;RSQ=0.9716;ERATE=0.0005;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201329955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201329965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4506;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201329995 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9398;ERATE=0.0004;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201330019 . CT C 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0004;THETA=0.0010;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201330121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201330218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201330242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201330286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201330339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9879;ERATE=0.0005;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201330342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0624;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 201330456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.503;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6701;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201330888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201330912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8007;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201331012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9050;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201331019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7552;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201331022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0206;AVGPOST=0.9989;RSQ=0.9834;ERATE=0.0005;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201331047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201331053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201331075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4665;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201331215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201331248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201331378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201331451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9854;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201331452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9381;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201331483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0196;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201331511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0198;AVGPOST=0.9984;RSQ=0.9718;ERATE=0.0004;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201331512 . AT A 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201331552 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5343;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201331763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3730;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 201331847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6938;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201331872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201331902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201332145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0571;AVGPOST=0.9978;RSQ=0.9854;ERATE=0.0004;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 201332190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8834;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201332283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0219;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201332295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201332331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9990;RSQ=0.9878;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201332440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201332514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201332536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0286;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201332624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0004;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201332688 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201332720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201332730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201332800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201332879 . CAAAA C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201332902 . AGAT A 721 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9529;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201332925 . T TGGCCA 2429 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9382;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201332928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201332931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6649;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201333052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201333079 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201333110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201333143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3733;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0007;THETA=0.0008;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 201333193 . ATG A 277 PASS INDEL;BAVGPOST=0.976;BRSQ=0.651;LDAF=0.0533;AVGPOST=0.9454;RSQ=0.5632;ERATE=0.0205;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201333217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6412;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201333260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9551;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201333309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0004;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201333422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201333469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201333474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0214;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201333539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201333563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.9976;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0005;THETA=0.0009;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 201333575 . CA C 2582 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9986;RSQ=0.9807;ERATE=0.0004;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201333600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2249;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 201333656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5892;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201333830 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0132;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201334087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5806;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 201334132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5809;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 201334146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3013;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 201334164 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0094;AVGPOST=0.9952;RSQ=0.7905;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201334233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201334251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8212;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201334400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201334437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201334540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8600;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201334660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201334711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0417;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 201334771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201334772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201334816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0193;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201334838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7542;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201334867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0121;AVGPOST=0.9968;RSQ=0.8986;ERATE=0.0007;THETA=0.0027;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201334880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.957;LDAF=0.2985;AVGPOST=0.9932;RSQ=0.9865;ERATE=0.0007;THETA=0.0002;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 201334909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.963;LDAF=0.4508;AVGPOST=0.9869;RSQ=0.9793;ERATE=0.0015;THETA=0.0003;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 201334926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0095;AVGPOST=0.9977;RSQ=0.9000;ERATE=0.0004;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201335107 . CT C 103 PASS INDEL;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7480;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201335152 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8646;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201335387 . A AC 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201335512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6509;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201335532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4570;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0006;THETA=0.0002;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 201335844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201335853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201336193 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201336257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201336291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4574;AVGPOST=0.9950;RSQ=0.9925;ERATE=0.0011;THETA=0.0002;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 201336297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7981;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201336338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5818;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 201336374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201336512 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7277;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201336587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1250;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 201336701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201336717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201336794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201336819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1937;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 201336969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201337033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201337066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201337103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7831;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201337104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8426;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201337130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201337161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201337163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201337209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8864;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201337375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8215;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201337391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201337468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 201337483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201337513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0083;AVGPOST=0.9970;RSQ=0.8486;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201337633 . CCT C 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201337777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201337901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338027 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201338059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0155;AVGPOST=0.9963;RSQ=0.8994;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201338066 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6491;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201338070 . C CA 36 PASS INDEL;BAVGPOST=0.987;BRSQ=0.488;LDAF=0.0226;AVGPOST=0.9705;RSQ=0.4757;ERATE=0.0082;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201338116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9786;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201338275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201338295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201338353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7459;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201338451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.776;LDAF=0.1221;AVGPOST=0.9245;RSQ=0.7070;ERATE=0.0133;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 201338680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.774;LDAF=0.1134;AVGPOST=0.9279;RSQ=0.7057;ERATE=0.0078;THETA=0.0002;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 201338682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1945;AVGPOST=0.9926;RSQ=0.9830;ERATE=0.0019;THETA=0.0001;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 201338701 . GA G 113 PASS INDEL;BAVGPOST=0.994;BRSQ=0.521;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.5862;ERATE=0.0008;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201338748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3826;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201338776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5350;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201339157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201339269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201339329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7289;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201339359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9095;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201339496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0971;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 201339535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0634;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 201339562 . T TG 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4383;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201339582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9195;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201339592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.917;LDAF=0.0397;AVGPOST=0.9926;RSQ=0.9312;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 201339615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201339644 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201339667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4519;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201339910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0216;AVGPOST=0.9960;RSQ=0.9206;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201339916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201340062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201340175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.823;LDAF=0.0176;AVGPOST=0.9967;RSQ=0.9159;ERATE=0.0005;THETA=0.0021;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201340220 . TG T 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201340236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6118;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201340259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201340378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201340385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201340430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201340575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0803;AVGPOST=0.9982;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 201340646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8064;ERATE=0.0007;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201340682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201340708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8612;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201340750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201340774 . TG T 349 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7918;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201340807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201340815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7136;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0005;THETA=0.0004;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 201340859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0865;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 201340884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8211;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 201340906 . CCTT C 76 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5764;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201340955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0638;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 201341029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9353;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201341057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7144;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 201341138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.931;LDAF=0.7875;AVGPOST=0.9650;RSQ=0.9246;ERATE=0.0069;THETA=0.0007;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 201341174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.695;LDAF=0.9594;AVGPOST=0.9608;RSQ=0.6181;ERATE=0.0076;THETA=0.0004;AC=2110;AN=2184 GT:DS:GL:BD 0.96611720 1
1 201341183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0820;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201341222 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341288 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5228;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0006;THETA=0.0003;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 201341378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341402 . AG A 881 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8776;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201341417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7440;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201341433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7289;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201341435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6286;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0008;THETA=0.0004;AC=1371;AN=2184 GT:DS:GL:BD 0.62774724 1
1 201341472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8088;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201341569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9719;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201341725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9702;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201341729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0816;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201341735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9968;AVGPOST=0.9987;RSQ=0.8654;ERATE=0.0004;THETA=0.0005;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 201341737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6721;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201341749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201341950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7293;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201341962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201342081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201342182 . GTA G 7776 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0752;AVGPOST=0.9979;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 201342194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201342219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201342300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201342303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201342347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0803;AVGPOST=0.9977;RSQ=0.9888;ERATE=0.0004;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 201342367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201342396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8535;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201342406 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9962;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0004;THETA=0.0010;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 201342413 . AG A 659 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201342502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0801;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 201342668 . C CT 1775 PASS INDEL;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0801;AVGPOST=0.9982;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 201342671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7440;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201342745 . C CTT 363 PASS INDEL;BAVGPOST=0.991;BRSQ=0.678;LDAF=0.0186;AVGPOST=0.9830;RSQ=0.6242;ERATE=0.0061;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201342771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0125;AVGPOST=0.9980;RSQ=0.9328;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201342803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9966;AVGPOST=0.9991;RSQ=0.9020;ERATE=0.0004;THETA=0.0006;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 201342868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201342992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201343045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0004;THETA=0.0019;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201343067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5713;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201343155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0122;AVGPOST=0.9949;RSQ=0.8369;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201343182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1035;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201343194 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201343212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201343308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6231;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0019;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 201343394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201343422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6238;AVGPOST=0.9961;RSQ=0.9941;ERATE=0.0007;THETA=0.0004;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 201343534 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9693;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201343543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201343569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201343650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201343676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5295;AVGPOST=0.9957;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 201343717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201343718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201343730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5504;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201343867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.908;LDAF=0.4784;AVGPOST=0.9405;RSQ=0.9185;ERATE=0.0099;THETA=0.0006;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 201344090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0818;AVGPOST=0.9984;RSQ=0.9912;ERATE=0.0004;THETA=0.0017;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201344111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201344508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9176;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201344526 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6229;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201344568 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.702;LDAF=0.0124;AVGPOST=0.9939;RSQ=0.8097;ERATE=0.0006;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201344658 rs61393465 GC G 19564 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3047;AVGPOST=0.9947;RSQ=0.9910;ERATE=0.0009;THETA=0.0007;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 201344686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201344759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201344776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9771;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0021;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 201344844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201344974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6339;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0005;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 201345075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201345227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201345263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201345299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201345457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201345471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8936;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201345500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201345594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3638;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201345625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201345631 . G GTCTA 41028 PASS INDEL;BAVGPOST=0.992;BRSQ=0.804;LDAF=0.9778;AVGPOST=0.9879;RSQ=0.7881;ERATE=0.0016;THETA=0.0008;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 201345732 rs5774607 T TCTAA 145065 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9844;AVGPOST=0.9976;RSQ=0.9342;ERATE=0.0006;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 201345733 . T TA 62 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.7766;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201345748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6632;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201345811 . CAT C 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6102;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201346308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6244;AVGPOST=0.9956;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 201346506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9857;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0004;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 201346518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0004;THETA=0.0019;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201346522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6337;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201346641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201346752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8046;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201346926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5992;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201346931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201346976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3879;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201347081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7937;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201347186 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201347375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201347493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201347656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201347742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9991;RSQ=0.9638;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201347896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201347950 . ACTT A 590 PASS INDEL;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7848;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201347985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8513;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201348104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201348279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0260;AVGPOST=0.9963;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201348348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201348474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201348571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9517;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201348592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8855;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201348614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201348682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9190;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201348738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201348954 . T TAAG 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6530;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201349013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201349081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201349146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201349156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201349465 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201349520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0037;AVGPOST=0.9942;RSQ=0.4527;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201349533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7080;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201349595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1444;AVGPOST=0.9953;RSQ=0.9856;ERATE=0.0006;THETA=0.0005;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 201349611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0457;AVGPOST=0.9971;RSQ=0.9769;ERATE=0.0006;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201349668 rs3216690 CT C 8050 PASS INDEL;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.2040;AVGPOST=0.9924;RSQ=0.9804;ERATE=0.0013;THETA=0.0003;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 201349699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6762;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201349750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.411;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3770;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201349800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5699;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201349861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8847;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201349903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0568;AVGPOST=0.9983;RSQ=0.9872;ERATE=0.0006;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 201350010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4151;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350012 rs34952062 A AT 15561 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2530;AVGPOST=0.9945;RSQ=0.9899;ERATE=0.0007;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 201350032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.581;LDAF=0.0089;AVGPOST=0.9904;RSQ=0.5980;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201350108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6181;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201350150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7020;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201350153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9189;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201350538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9131;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201350548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2545;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0004;THETA=0.0001;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 201350617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201350754 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201350791 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5089;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2053;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 201350885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8808;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201350905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201350953 rs112349480 A ATCACT 59700 PASS INDEL;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2535;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0006;THETA=0.0005;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 201351023 . CATTT C 2674 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201351073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8911;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201351077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2545;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 201351160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0136;AVGPOST=0.9951;RSQ=0.8577;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201351175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2057;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 201351270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0004;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201351421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201351438 rs68073540 CTTCT C 21646 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.2540;AVGPOST=0.9817;RSQ=0.9668;ERATE=0.0037;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 201351645 rs60261691 TC T 6333 PASS INDEL;BAVGPOST=0.951;BRSQ=0.873;LDAF=0.2135;AVGPOST=0.9387;RSQ=0.8699;ERATE=0.0118;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 201351659 . TC T 46 PASS INDEL;BAVGPOST=0.932;BRSQ=0.064;LDAF=0.1290;AVGPOST=0.8317;RSQ=0.3997;ERATE=0.0090;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201351666 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9969;RSQ=0.8851;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201351733 . C CAT 240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5719;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201351799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201351812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201351973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8021;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201351977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0108;AVGPOST=0.9962;RSQ=0.8404;ERATE=0.0014;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201351981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7967;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201352444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9640;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201352626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201352671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201352692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201352764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7235;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201352834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9758;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201352855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201353021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9352;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201353065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201353272 . TTTG T 158 PASS INDEL;BAVGPOST=0.991;BRSQ=0.687;LDAF=0.0224;AVGPOST=0.9758;RSQ=0.5344;ERATE=0.0097;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201353295 . GT G 392 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7991;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201353310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201353527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6541;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201353540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0239;AVGPOST=0.9972;RSQ=0.9567;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201353560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5591;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201353663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201353688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3811;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0011;THETA=0.0004;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 201353692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201353849 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1487;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 201353923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9984;RSQ=0.9830;ERATE=0.0004;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201354007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4238;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 201354126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3809;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 201354338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7132;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201354467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9252;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201354496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201354562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3298;AVGPOST=0.9995;RSQ=0.9994;ERATE=0.0006;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 201354598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201354623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201354627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201354831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201354886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9117;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201354907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9500;ERATE=0.0006;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201355108 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6907;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201355448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201355466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201355477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201355545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201355627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201355678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201355711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201355733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201355799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201355919 . TTG T 126 PASS INDEL;BAVGPOST=0.990;BRSQ=0.637;LDAF=0.0231;AVGPOST=0.9753;RSQ=0.5663;ERATE=0.0087;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201356212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0884;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 201356224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9016;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201356230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8250;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201356239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.920;LDAF=0.0241;AVGPOST=0.9970;RSQ=0.9474;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201356467 . G GT 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5512;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201356579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3370;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 201356762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201356879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201356950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7153;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201356962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201357061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0104;AVGPOST=0.9983;RSQ=0.9333;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201357400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7123;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201357582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.859;LDAF=0.0183;AVGPOST=0.9939;RSQ=0.8698;ERATE=0.0007;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201357587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7870;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201357592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.779;LDAF=0.0101;AVGPOST=0.9963;RSQ=0.8649;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201357698 . A AT 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.4268;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201357888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201358031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0139;AVGPOST=0.9990;RSQ=0.9725;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201358036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0914;AVGPOST=0.9933;RSQ=0.9703;ERATE=0.0003;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 201358056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4628;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201358256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201358265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201358312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6687;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201358351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201358395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5268;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201358554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201358976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201359043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201359071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7579;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201359145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201359219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201359423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3354;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0006;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 201359463 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5487;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201359530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359546 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201359736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8957;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201359760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5326;AVGPOST=0.9960;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 201359875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4464;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201359910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201360045 . C CT 364 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9148;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201360084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201360162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201360357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201360358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6620;ERATE=0.0008;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201360392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4604;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201360471 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201360592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8274;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201360598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201360819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0125;AVGPOST=0.9970;RSQ=0.8941;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201360895 . T TG 341 PASS INDEL;BAVGPOST=0.990;BRSQ=0.474;LDAF=0.0166;AVGPOST=0.9794;RSQ=0.5005;ERATE=0.0024;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201360927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201361200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7736;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201361246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9323;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9546;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4259;ERATE=0.0005;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9450;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8792;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361578 . A AAG 620 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9239;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201361599 . A AC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0003;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1449;AVGPOST=0.9915;RSQ=0.9744;ERATE=0.0014;THETA=0.0007;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 201361604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201361667 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201361741 . A AG 848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0068;AVGPOST=0.9981;RSQ=0.8887;ERATE=0.0004;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201361943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1492;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 201362124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201362130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9773;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201362415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7001;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201362454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201362474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362629 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8057;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201362659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9742;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9689;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201362783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0003;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201362936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8355;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201363024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8872;ERATE=0.0003;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201363026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5309;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 201363147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201363166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201363254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8202;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201363266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5998;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201363290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8765;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201363399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9540;AVGPOST=0.9983;RSQ=0.9842;ERATE=0.0006;THETA=0.0005;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 201363479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201363587 . T TG 835 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9086;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9570;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363703 . C CT 647 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201363783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201363813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5339;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0007;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 201363849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201363979 . GAGA G 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201364156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9465;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201364177 . T TG 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201364180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201364198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201364333 . AAAAG A 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9209;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364378 . AGAAAG A 651 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9058;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201364402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364421 . TAGTC T 200 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5636;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201364423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201364575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0174;AVGPOST=0.9986;RSQ=0.9729;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201364592 . A AG 275 PASS INDEL;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8109;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201364660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9408;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9263;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201364717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201364718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.877;LDAF=0.1901;AVGPOST=0.9335;RSQ=0.8323;ERATE=0.0405;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 201364782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201364830 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201364839 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201364840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6750;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201364876 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4790;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201365065 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201365101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0135;AVGPOST=0.9975;RSQ=0.9309;ERATE=0.0006;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201365194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.753;LDAF=0.3096;AVGPOST=0.9092;RSQ=0.8611;ERATE=0.0053;THETA=0.0003;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 201365749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1203;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 201365956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201366016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.7137;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201366196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8175;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201366252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201366738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0116;AVGPOST=0.9948;RSQ=0.8257;ERATE=0.0007;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201366741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0163;AVGPOST=0.9969;RSQ=0.9312;ERATE=0.0004;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201366774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0070;AVGPOST=0.9929;RSQ=0.6130;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201367458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9533;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201367511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6789;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201367521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6462;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201367658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7391;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201367685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0333;AVGPOST=0.9976;RSQ=0.9711;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201368040 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2279;AVGPOST=0.9894;RSQ=0.9777;ERATE=0.0010;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 201368231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.651;LDAF=0.0194;AVGPOST=0.9880;RSQ=0.7601;ERATE=0.0007;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201368257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0069;AVGPOST=0.9917;RSQ=0.5193;ERATE=0.0009;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201368283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0076;AVGPOST=0.9931;RSQ=0.6827;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201368284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2268;AVGPOST=0.9931;RSQ=0.9850;ERATE=0.0010;THETA=0.0003;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 201368289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.710;LDAF=0.0931;AVGPOST=0.9687;RSQ=0.8735;ERATE=0.0009;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 201368290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8734;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201368354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201368383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.929;LDAF=0.2059;AVGPOST=0.9755;RSQ=0.9512;ERATE=0.0011;THETA=0.0007;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 201368407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.923;LDAF=0.2007;AVGPOST=0.9675;RSQ=0.9340;ERATE=0.0009;THETA=0.0005;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 201368421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9921;RSQ=0.5201;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201368428 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1191;AVGPOST=0.9947;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 201368476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6516;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201368539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0150;AVGPOST=0.9971;RSQ=0.9145;ERATE=0.0006;THETA=0.0050;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201368661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9993;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201368703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8245;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201368710 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9300;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201368712 . TG T 13 PASS INDEL;BAVGPOST=0.988;BRSQ=0.463;LDAF=0.0324;AVGPOST=0.9533;RSQ=0.3936;ERATE=0.0056;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201369534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.1196;AVGPOST=0.9952;RSQ=0.9819;ERATE=0.0005;THETA=0.0007;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 201369645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.8084;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201369695 . TACTG T 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6992;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201369793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201369805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201369876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6950;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201369948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9200;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201369958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0076;AVGPOST=0.9981;RSQ=0.8982;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201370211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0471;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201370233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201370348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9308;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201370357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0481;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 201370385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7176;AVGPOST=0.9962;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 201370621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6008;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 201370628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201370799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7584;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201370806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201370950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201370967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0342;AVGPOST=0.9952;RSQ=0.9456;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201370973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201370984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0079;AVGPOST=0.9973;RSQ=0.8670;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201371037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201371041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7888;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201371054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201371055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4680;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201371063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2612;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 201371198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8998;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201371265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4129;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201371270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2481;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 201371338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201371533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201371539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201371552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5011;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201371723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8388;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201371732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9990;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201371745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2669;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 201371834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201371919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201371921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0057;AVGPOST=0.9982;RSQ=0.8781;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201371971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201372086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9065;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201372123 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201372124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8855;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201372165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6464;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201372244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0248;AVGPOST=0.9971;RSQ=0.9598;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201372367 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9118;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201372368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8183;ERATE=0.0012;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201372392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9238;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201372463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201372499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201372550 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201372581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3348;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 201372617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2668;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 201372717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201372904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201372918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201372941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201372998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9214;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201373043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201373079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6390;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201373282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0067;AVGPOST=0.9917;RSQ=0.5304;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201373389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9020;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201373443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6463;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201373455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9983;RSQ=0.9352;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201373464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4988;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201373489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8256;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201373635 . TG T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4309;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201373638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9251;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201373732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201373939 . G GT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201374112 . AT A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201374295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201374335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201374429 . GGTA G 65 PASS INDEL;BAVGPOST=0.997;BRSQ=0.690;LDAF=0.0134;AVGPOST=0.9862;RSQ=0.5598;ERATE=0.0045;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201374465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8341;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201374518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9490;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201374523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.935;LDAF=0.3260;AVGPOST=0.9470;RSQ=0.9042;ERATE=0.0154;THETA=0.0003;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 201374546 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7992;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201374601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201374689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201374755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8889;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201374811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8703;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201374936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8793;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201375022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201375038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201375098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5442;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201375127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201375177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201375253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5729;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201375285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6973;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201375562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4564;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201375604 . AT A 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8711;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201375615 . CTT C 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3885;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201375715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6118;ERATE=0.0004;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201375910 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5597;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201375948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0004;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201375961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1428;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0004;THETA=0.0010;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 201376003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1032;AVGPOST=0.9977;RSQ=0.9900;ERATE=0.0004;THETA=0.0011;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 201376042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8731;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201376095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201376268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201376272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7461;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201376309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201376371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0068;AVGPOST=0.9985;RSQ=0.9223;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201376533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201376583 . G GA 551 PASS INDEL;BAVGPOST=0.990;BRSQ=0.663;LDAF=0.0207;AVGPOST=0.9806;RSQ=0.6404;ERATE=0.0039;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201376656 . AAAAAGG A 211 PASS INDEL;BAVGPOST=0.997;BRSQ=0.570;LDAF=0.0070;AVGPOST=0.9906;RSQ=0.4576;ERATE=0.0020;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201376667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7748;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201376689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7591;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201376728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9012;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201376729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201376737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201376965 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8746;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201376986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201377135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201377249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201377357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201377415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201377426 . CA C 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7021;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201377500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0050;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201377619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0196;AVGPOST=0.9980;RSQ=0.9534;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201377620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.1995;AVGPOST=0.9867;RSQ=0.9703;ERATE=0.0006;THETA=0.0006;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 201377652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8329;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201377653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201377705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201377853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201377919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7766;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201377920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5250;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201378008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201378202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201378259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1964;ERATE=0.0003;THETA=0.0021;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201378340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201378592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9371;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201378684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6900;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201378758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0257;AVGPOST=0.9970;RSQ=0.9563;ERATE=0.0004;THETA=0.0013;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201378790 . C CT 147 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6925;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201378820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.8942;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201378884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5962;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201378891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7430;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201379007 . CTAGTT C 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201379024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201379126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8679;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201379286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201379540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201379616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9086;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201379647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201379706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201379752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201379830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201379856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9424;ERATE=0.0004;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201379859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7508;ERATE=0.0006;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201379971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0065;AVGPOST=0.9970;RSQ=0.8459;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201380033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0136;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201380046 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201380106 . A AC 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4179;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201380316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201380327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6950;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201380455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0442;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0004;THETA=0.0026;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201380680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7656;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201380708 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201380786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201380827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.958;LDAF=0.2661;AVGPOST=0.9818;RSQ=0.9655;ERATE=0.0008;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 201380937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201380971 . T TGA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201381049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5052;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201381093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0619;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0004;THETA=0.0009;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 201381110 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201381163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8223;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201381194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9605;ERATE=0.0005;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201381213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0443;AVGPOST=0.9939;RSQ=0.9410;ERATE=0.0006;THETA=0.0007;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201381233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201381369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201381388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201381393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8130;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201381521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0724;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0004;THETA=0.0015;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 201381640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0084;AVGPOST=0.9973;RSQ=0.8787;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201381677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8252;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201381697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0639;AVGPOST=0.9978;RSQ=0.9837;ERATE=0.0005;THETA=0.0007;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 201381938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201382006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8244;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201382073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201382230 . CAACT C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5250;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201382261 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201382450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0843;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0009;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201382506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9015;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201382593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4693;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201382727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0842;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0010;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201383250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201383339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201383707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201383914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201383979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8784;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201384003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201384178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201384207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6853;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201384302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8807;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201384379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201384382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201384387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201384481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5929;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201384616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6748;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201384626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201384734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9985;RSQ=0.9470;ERATE=0.0003;THETA=0.0014;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201384756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201384786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7313;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201384863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201384876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201384891 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3268;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 201384904 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6234;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201384913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3601;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0006;THETA=0.0003;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 201384974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6985;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201385077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201385126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0164;AVGPOST=0.9966;RSQ=0.9136;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201385133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5958;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201385150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0105;AVGPOST=0.9968;RSQ=0.8982;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201385308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201385402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201385431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8151;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201385456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201385642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5643;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201385693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0344;AVGPOST=0.9965;RSQ=0.9625;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201385743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8195;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201385827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6039;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201385864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6585;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 201385878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1576;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 201385958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9176;AVGPOST=0.9961;RSQ=0.9823;ERATE=0.0004;THETA=0.0006;AC=2003;AN=2184 GT:DS:GL:BD 0.91712457 1
1 201385978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201386112 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201386166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9004;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201386174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9983;RSQ=0.8839;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201386175 rs66475677 T TAACA 31 PASS INDEL;BAVGPOST=0.992;BRSQ=0.479;LDAF=0.0108;AVGPOST=0.9906;RSQ=0.6559;ERATE=0.0011;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201386259 . GTAAA G 8726 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1632;AVGPOST=0.9863;RSQ=0.9651;ERATE=0.0013;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201386262 . ATT A 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4901;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201386377 . GA G 7 PASS INDEL;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0082;AVGPOST=0.9892;RSQ=0.5074;ERATE=0.0020;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201386436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9732;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201386458 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7850;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201386595 . T TG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5471;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201386596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9362;AVGPOST=0.9984;RSQ=0.9892;ERATE=0.0004;THETA=0.0006;AC=2046;AN=2184 GT:DS:GL:BD 0.93681318 1
1 201386745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201386767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201386820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9785;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201386934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9373;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201386940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1600;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 201386962 . CTCAA C 423 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6613;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201387145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201387709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201387740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9982;RSQ=0.9557;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201387863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201387912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201388026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201388063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9990;RSQ=0.9676;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201388190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201388316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9455;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201388482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201388516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6894;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201388564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7273;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201388738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4521;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201388783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9575;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201388850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201388855 . G GT 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6295;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201388865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2262;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 201388971 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201389204 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201389233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9776;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201389370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201389494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8754;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201389500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201389544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201389580 . T TC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201389600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201389613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201389672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3267;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0018;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 201389767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0071;AVGPOST=0.9978;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201389780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0120;AVGPOST=0.9927;RSQ=0.7823;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201389866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.820;LDAF=0.1586;AVGPOST=0.9617;RSQ=0.9005;ERATE=0.0005;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201389932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.821;LDAF=0.1598;AVGPOST=0.9576;RSQ=0.8892;ERATE=0.0009;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 201389933 . G GAT 948 PASS INDEL;BAVGPOST=0.950;BRSQ=0.814;LDAF=0.1554;AVGPOST=0.9572;RSQ=0.8851;ERATE=0.0012;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 201389933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201390061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201390125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3480;AVGPOST=0.9918;RSQ=0.9863;ERATE=0.0010;THETA=0.0004;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 201390183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8674;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201390342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201390361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 201390447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201390511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201390564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8147;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201390576 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7958;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201390623 rs113905742 G GT 484 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8648;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201390750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7634;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201390850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201390869 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201391001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201391058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9815;ERATE=0.0005;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201391233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201391249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9843;ERATE=0.0002;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201391265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6004;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201391475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201391714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201391735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9748;ERATE=0.0004;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201392009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4577;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201392062 . CTT C 2093 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0210;AVGPOST=0.9971;RSQ=0.9491;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201392067 . A AT 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3931;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201392088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8971;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201392113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.764;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.8741;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201392176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.934;LDAF=0.1145;AVGPOST=0.9719;RSQ=0.8943;ERATE=0.0006;THETA=0.0006;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 201392186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0065;AVGPOST=0.9974;RSQ=0.8330;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201392228 . TA T 93 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0039;AVGPOST=0.9947;RSQ=0.5093;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201392271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2640;AVGPOST=0.9937;RSQ=0.9866;ERATE=0.0005;THETA=0.0023;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 201392333 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201392426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201392443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201392452 . CATT C 374 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0058;AVGPOST=0.9957;RSQ=0.6772;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201392536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7673;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201392591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201392724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0079;AVGPOST=0.9990;RSQ=0.9486;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201392747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201392778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5396;AVGPOST=0.9882;RSQ=0.9798;ERATE=0.0016;THETA=0.0003;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 201392914 . ACT A 80 PASS INDEL;BAVGPOST=0.991;BRSQ=0.563;LDAF=0.0261;AVGPOST=0.9707;RSQ=0.5535;ERATE=0.0039;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201393009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1359;AVGPOST=0.9959;RSQ=0.9856;ERATE=0.0005;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 201393084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5277;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201393186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1273;AVGPOST=0.9974;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 201393254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5644;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201393299 . T TA 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8476;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201393341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.544;LDAF=0.0037;AVGPOST=0.9948;RSQ=0.5460;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201393450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201393468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7332;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201393498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201393539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201393658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201393679 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201393755 . GA G 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6352;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201393846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8996;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201393882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7696;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201394020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6231;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201394117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201394187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0239;AVGPOST=0.9975;RSQ=0.9543;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201394463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0227;AVGPOST=0.9993;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201394494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201394507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1917;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 201394519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201394548 . TA T 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.5354;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201394569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201394580 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.596;LDAF=0.0246;AVGPOST=0.9736;RSQ=0.5774;ERATE=0.0080;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201394599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9464;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201394636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201394697 . CT C 112 PASS INDEL;BAVGPOST=0.972;BRSQ=0.461;LDAF=0.0453;AVGPOST=0.9398;RSQ=0.4581;ERATE=0.0130;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201394760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8404;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201394891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5037;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201395023 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5880;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201395104 rs71078152 CA C 36106 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3415;AVGPOST=0.9895;RSQ=0.9849;ERATE=0.0019;THETA=0.0010;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 201395113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.5885;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0006;THETA=0.0007;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 201395121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3410;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0006;THETA=0.0005;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201395162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201395301 . TAA T 142 PASS INDEL;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9398;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201395367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6652;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201395378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6003;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201395418 . CAGAG C 118 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7370;ERATE=0.0013;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201395445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4391;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201395513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3417;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0006;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201395558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3413;AVGPOST=0.9972;RSQ=0.9961;ERATE=0.0006;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 201395584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201395615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5295;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201395880 . TAC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7243;ERATE=0.0002;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201395892 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4121;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201395923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4256;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3423;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0007;THETA=0.0007;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 201396195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9292;AVGPOST=0.9979;RSQ=0.9898;ERATE=0.0005;THETA=0.0003;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 201396236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7977;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201396242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.7006;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3411;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201396488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5993;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396578 . CAGA C 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4140;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3412;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201396645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5805;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201396703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5920;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201396707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6432;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201396756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201396903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201396999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3406;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201397037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7810;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201397054 rs67444307 TCTCA T 53016 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3423;AVGPOST=0.9871;RSQ=0.9819;ERATE=0.0021;THETA=0.0016;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201397075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3408;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201397096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0133;AVGPOST=0.9978;RSQ=0.9293;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201397109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3399;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0007;THETA=0.0009;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 201397180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3397;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 201397199 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201397205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6854;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201397266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5960;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201397272 rs34981133 C CA 36604 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3388;AVGPOST=0.9881;RSQ=0.9836;ERATE=0.0021;THETA=0.0038;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 201397373 rs72162415 AT A 52934 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3411;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 201397451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8794;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201397490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3404;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0003;THETA=0.0022;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 201397493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5894;AVGPOST=0.9970;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=1287;AN=2184 GT:DS:GL:BD 0.58928573 1
1 201397508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3409;AVGPOST=0.9967;RSQ=0.9957;ERATE=0.0004;THETA=0.0012;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 201397524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5883;AVGPOST=0.9975;RSQ=0.9967;ERATE=0.0003;THETA=0.0054;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 201397544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3412;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201397762 . CAT C 1574 PASS INDEL;BAVGPOST=0.995;BRSQ=0.754;LDAF=0.0117;AVGPOST=0.9951;RSQ=0.8116;ERATE=0.0009;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201397934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3406;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3403;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0003;THETA=0.0008;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201398154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0701;AVGPOST=0.9973;RSQ=0.9855;ERATE=0.0003;THETA=0.0008;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 201398174 rs71586995 C CT 63249 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3414;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0007;THETA=0.0010;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5138;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=1122;AN=2184 GT:DS:GL:BD 0.51373625 1
1 201398258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.9027;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201398428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8748;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201398438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.894;LDAF=0.0295;AVGPOST=0.9956;RSQ=0.9448;ERATE=0.0007;THETA=0.0014;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201398484 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3415;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6618;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201398538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201398641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3418;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0007;THETA=0.0008;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3412;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 201398789 . G GA 85 PASS INDEL;BAVGPOST=0.998;BRSQ=0.442;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.4764;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201398841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201398861 rs72347272 CATAG C 52515 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3404;AVGPOST=0.9949;RSQ=0.9925;ERATE=0.0010;THETA=0.0008;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 201398894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.978;LDAF=0.3167;AVGPOST=0.9897;RSQ=0.9862;ERATE=0.0004;THETA=0.0006;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 201398955 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.978;LDAF=0.3172;AVGPOST=0.9890;RSQ=0.9852;ERATE=0.0005;THETA=0.0021;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 201398956 . TAG T 278 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8630;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201399285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7123;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201399475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9544;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201399517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3410;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0003;THETA=0.0010;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 201399535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9298;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 201399603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201399752 rs112565606 CT C 50885 PASS INDEL;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3378;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0005;THETA=0.0008;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 201399816 . TA T 5926 PASS INDEL;BAVGPOST=0.972;BRSQ=0.951;LDAF=0.3277;AVGPOST=0.9776;RSQ=0.9691;ERATE=0.0010;THETA=0.0007;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 201399818 . CTCT C 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6306;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201399866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7706;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201399888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201400081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201400121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4653;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201400130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201400217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9260;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201400323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9324;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201400347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201400386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7338;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201400426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7276;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201400767 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2788;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 201400788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4588;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201400998 . C CA 95 PASS INDEL;BAVGPOST=0.993;BRSQ=0.557;LDAF=0.0213;AVGPOST=0.9720;RSQ=0.4966;ERATE=0.0045;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201401015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6707;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201401142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4544;AVGPOST=0.9946;RSQ=0.9929;ERATE=0.0007;THETA=0.0006;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 201401177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5671;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201401180 . GTTAT G 432 PASS INDEL;BAVGPOST=0.996;BRSQ=0.689;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9077;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201401200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0553;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 201401248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8554;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201401311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7421;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201401426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5235;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201401630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6983;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201401671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201401687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201401720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7920;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201401941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0205;AVGPOST=0.9987;RSQ=0.9764;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201401991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9986;RSQ=0.9801;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201402001 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6992;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201402158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6477;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201402178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0090;AVGPOST=0.9933;RSQ=0.7117;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201402235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8108;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201402423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8911;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201402424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6858;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201402450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7302;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201402579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201402600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9253;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201402666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8609;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201402816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8673;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 201402829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4563;AVGPOST=0.9976;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 201402949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7129;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201403027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5797;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201403042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9025;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201403059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201403068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201403069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201403092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201403167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201403188 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201403277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9241;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201403299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0049;AVGPOST=0.9977;RSQ=0.8355;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201403333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201403381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5266;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201403485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8097;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201403585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0541;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201403726 . T TG 1208 PASS INDEL;BAVGPOST=0.994;BRSQ=0.941;LDAF=0.0545;AVGPOST=0.9987;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201403803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201403870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9423;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201403881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7783;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201403965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201404066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4311;AVGPOST=0.9966;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 201404301 . G GCCTT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7368;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201404320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201404323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9071;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201404421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201404435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201404478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201404619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4750;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201404744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201405051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7710;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201405244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201405270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8793;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 201405320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201405540 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 201405559 rs79708760 A AGT 29388 PASS INDEL;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.8580;AVGPOST=0.9742;RSQ=0.9185;ERATE=0.0085;THETA=0.0005;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 201405585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9596;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201405685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4975;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201405692 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201405823 rs111754225 AGT A 6416 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0550;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201405828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.5362;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201405834 rs71651208 TTG T 21751 PASS INDEL;BAVGPOST=0.945;BRSQ=0.806;LDAF=0.7966;AVGPOST=0.8672;RSQ=0.6797;ERATE=0.0216;THETA=0.0007;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 201405920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.229;LDAF=0.1673;AVGPOST=0.8057;RSQ=0.4512;ERATE=0.0090;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 201406106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.549;BRSQ=0.093;LDAF=0.3463;AVGPOST=0.6163;RSQ=0.2603;ERATE=0.0440;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 201406108 . AT A 114 PASS INDEL;BAVGPOST=0.925;BRSQ=0.081;LDAF=0.0704;AVGPOST=0.9101;RSQ=0.4782;ERATE=0.0027;THETA=0.0010;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201406122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.110;LDAF=0.0812;AVGPOST=0.8842;RSQ=0.4021;ERATE=0.0052;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201406133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.368;LDAF=0.1088;AVGPOST=0.8744;RSQ=0.5045;ERATE=0.0057;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 201406140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.231;LDAF=0.0649;AVGPOST=0.9480;RSQ=0.6788;ERATE=0.0022;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 201406154 . ATT A 57 PASS INDEL;BAVGPOST=0.941;BRSQ=0.127;LDAF=0.1039;AVGPOST=0.8529;RSQ=0.3862;ERATE=0.0082;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 201406196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.146;LDAF=0.1034;AVGPOST=0.8523;RSQ=0.3603;ERATE=0.0114;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201406214 . AAT A 203 PASS INDEL;BAVGPOST=0.884;BRSQ=0.134;LDAF=0.1694;AVGPOST=0.7849;RSQ=0.3916;ERATE=0.0183;THETA=0.0029;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 201406223 . ATT A 662 PASS INDEL;BAVGPOST=0.920;BRSQ=0.186;LDAF=0.0959;AVGPOST=0.9024;RSQ=0.5438;ERATE=0.0079;THETA=0.0011;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201406232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.638;BRSQ=0.313;LDAF=0.6271;AVGPOST=0.6623;RSQ=0.3933;ERATE=0.0370;THETA=0.0010;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 201406250 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.644;LDAF=0.1360;AVGPOST=0.8392;RSQ=0.4390;ERATE=0.0157;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 201406258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.178;LDAF=0.0324;AVGPOST=0.9685;RSQ=0.6014;ERATE=0.0013;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201406269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.705;LDAF=0.0180;AVGPOST=0.9913;RSQ=0.8066;ERATE=0.0010;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201406317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0554;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201406460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.5965;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201406471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9184;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201406615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201406672 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9273;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201406696 . TAC T 6116 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0557;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 201406704 . GTC G 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8471;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201406710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8048;AVGPOST=0.9821;RSQ=0.9613;ERATE=0.0056;THETA=0.0005;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 201406780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201406814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0605;AVGPOST=0.9983;RSQ=0.9890;ERATE=0.0002;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201406930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0548;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0009;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201406969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0119;AVGPOST=0.9957;RSQ=0.8708;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201406995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201407013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8788;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 201407059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201407090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4797;AVGPOST=0.9957;RSQ=0.9939;ERATE=0.0005;THETA=0.0006;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 201407110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201407125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.4023;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201407151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7714;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201407256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201407331 rs75713761 GA G 2461 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0550;AVGPOST=0.9989;RSQ=0.9906;ERATE=0.0005;THETA=0.0002;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201407418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0111;AVGPOST=0.9878;RSQ=0.5457;ERATE=0.0010;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201407431 . C CA 342 PASS INDEL;BAVGPOST=0.974;BRSQ=0.740;LDAF=0.0654;AVGPOST=0.9653;RSQ=0.7868;ERATE=0.0024;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 201407446 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.806;LDAF=0.0380;AVGPOST=0.9699;RSQ=0.6823;ERATE=0.0017;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201407461 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9489;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201407589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201407669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201407854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4848;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201407911 . G GA 1072 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201408007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201408217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9231;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201408257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408349 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8665;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201408352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5727;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201408447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0552;AVGPOST=0.9986;RSQ=0.9907;ERATE=0.0002;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201408463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201408502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7478;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0004;THETA=0.0008;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 201408533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9250;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201408588 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201408678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9279;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201408679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201408753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201408765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201408796 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0188;AVGPOST=0.9950;RSQ=0.9009;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201408823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201409002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201409180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8695;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201409228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6133;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201409395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0559;AVGPOST=0.9973;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 201409470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0549;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0004;THETA=0.0008;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201409521 . TG T 394 PASS INDEL;BAVGPOST=0.939;BRSQ=0.466;LDAF=0.0784;AVGPOST=0.9150;RSQ=0.5425;ERATE=0.0156;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 201409584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201409599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201409612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201409619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5745;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201409624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201409642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9225;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201409807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0194;AVGPOST=0.9964;RSQ=0.9242;ERATE=0.0006;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201409834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201409838 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9462;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201409879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201409901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8790;AVGPOST=0.9982;RSQ=0.9928;ERATE=0.0004;THETA=0.0006;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 201409932 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201410023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.9163;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201410107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0069;AVGPOST=0.9967;RSQ=0.8006;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201410114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5046;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201410197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201410278 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201410302 . TG T 373 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0047;AVGPOST=0.9955;RSQ=0.6334;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201410344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9887;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201410373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201410559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0355;AVGPOST=0.9992;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201410686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201410714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201410988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201411178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201411274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1609;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201411296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201411381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1613;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201411431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201411491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201411512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8514;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201411754 . A AC 327 PASS INDEL;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8501;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201411784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0083;AVGPOST=0.9985;RSQ=0.9327;ERATE=0.0004;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201411818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9898;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 201411851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201411861 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0102;AVGPOST=0.9993;RSQ=0.9727;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201411947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201411993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201412035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201412051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0252;AVGPOST=0.9985;RSQ=0.9789;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201412153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201412200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201412227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201412246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201412256 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201412261 rs61587390 TTTTC T 2257 PASS INDEL;BAVGPOST=0.563;BRSQ=0.125;LDAF=0.3441;AVGPOST=0.6446;RSQ=0.3340;ERATE=0.0335;THETA=0.0007;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 201412312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201412315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7336;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201412316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5561;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201412319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6584;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201412320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201412336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0101;AVGPOST=0.9984;RSQ=0.9367;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201412464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2080;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 201412489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8076;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201412678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2134;AVGPOST=0.9935;RSQ=0.9840;ERATE=0.0005;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 201412853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201413096 . ATG A 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201413097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8896;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201413098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9523;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201413138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0284;AVGPOST=0.9991;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201413139 . G GT 52 PASS INDEL;BAVGPOST=0.996;BRSQ=0.415;LDAF=0.0059;AVGPOST=0.9928;RSQ=0.5115;ERATE=0.0010;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201413446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201413453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8996;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201413454 . T TA 277 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201413462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201413523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201413589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201413634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201413717 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8802;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201413751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9480;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201413775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201413840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201413873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7428;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201413883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9542;ERATE=0.0002;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201413926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201414001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9423;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201414018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201414077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8968;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201414091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8100;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201414113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9486;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201414148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7144;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201414162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201414174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201414203 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414244 . A AC 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201414363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8469;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201414452 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201414455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7983;ERATE=0.0010;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201414509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7703;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201414517 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201414603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6011;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201414699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1620;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201414774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201414875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7910;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201414897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9872;AVGPOST=0.9989;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 201414931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2102;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 201414985 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201415025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201415114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6513;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201415140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201415186 . G GA 6538 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0819;AVGPOST=0.9982;RSQ=0.9901;ERATE=0.0007;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201415189 . AG A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201415212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201415313 . CAT C 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6161;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201415525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201415637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0038;AVGPOST=0.9964;RSQ=0.6503;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201415657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4746;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201415681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201415693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201415736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1255;AVGPOST=0.9968;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201415800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201415852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5914;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201415866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0213;AVGPOST=0.9962;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201415873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5586;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201415887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0840;AVGPOST=0.9963;RSQ=0.9830;ERATE=0.0004;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201415899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7552;AVGPOST=0.9870;RSQ=0.9707;ERATE=0.0020;THETA=0.0005;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 201415972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.812;LDAF=0.0184;AVGPOST=0.9941;RSQ=0.8708;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201416046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.910;LDAF=0.1543;AVGPOST=0.9412;RSQ=0.8238;ERATE=0.0044;THETA=0.0039;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 201416099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.922;LDAF=0.3044;AVGPOST=0.9194;RSQ=0.8557;ERATE=0.0066;THETA=0.0012;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 201416105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.523;LDAF=0.0959;AVGPOST=0.9286;RSQ=0.6954;ERATE=0.0038;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201416131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0858;AVGPOST=0.9926;RSQ=0.9672;ERATE=0.0006;THETA=0.0026;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201416164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.943;LDAF=0.0808;AVGPOST=0.9975;RSQ=0.9874;ERATE=0.0005;THETA=0.0029;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 201416260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0840;AVGPOST=0.9952;RSQ=0.9752;ERATE=0.0005;THETA=0.0010;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201416577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0128;AVGPOST=0.9946;RSQ=0.8466;ERATE=0.0007;THETA=0.0048;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201417275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.932;LDAF=0.2061;AVGPOST=0.9749;RSQ=0.9431;ERATE=0.0016;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 201417439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4106;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201417549 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.943;LDAF=0.3566;AVGPOST=0.9577;RSQ=0.9301;ERATE=0.0090;THETA=0.0042;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 201417633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0810;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0004;THETA=0.0096;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 201417844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201417845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8194;ERATE=0.0006;THETA=0.0144;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201417891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9264;ERATE=0.0003;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201417978 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0898;AVGPOST=0.9961;RSQ=0.9825;ERATE=0.0003;THETA=0.0013;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 201417984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.4315;AVGPOST=0.9703;RSQ=0.9555;ERATE=0.0026;THETA=0.0046;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 201417987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0891;AVGPOST=0.9950;RSQ=0.9786;ERATE=0.0003;THETA=0.0031;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 201417988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201417994 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201418002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201418061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201418071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2784;AVGPOST=0.9914;RSQ=0.9839;ERATE=0.0009;THETA=0.0106;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 201418109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1044;AVGPOST=0.9978;RSQ=0.9903;ERATE=0.0004;THETA=0.0016;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201418125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0956;AVGPOST=0.9976;RSQ=0.9886;ERATE=0.0006;THETA=0.0008;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201418300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8907;ERATE=0.0003;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201418325 . TC T 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9208;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201418332 . CT C 1097 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9597;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201418333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0830;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 201418458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201418751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8875;ERATE=0.0003;THETA=0.0110;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201418780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201418844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201418879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7030;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201418960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201419017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201419031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0837;AVGPOST=0.9983;RSQ=0.9911;ERATE=0.0004;THETA=0.0015;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 201419060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0858;AVGPOST=0.9966;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 201419116 . T TC 11539 PASS INDEL;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.0918;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0006;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 201419253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0866;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0003;THETA=0.0043;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 201419281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.9753;AVGPOST=0.9986;RSQ=0.9774;ERATE=0.0005;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 201419336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9755;AVGPOST=0.9986;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 201419350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201419438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.8862;AVGPOST=0.9941;RSQ=0.9782;ERATE=0.0016;THETA=0.0023;AC=1938;AN=2184 GT:DS:GL:BD 0.88736266 1
1 201419478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201419516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8365;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201419534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201419540 . C CTG 13307 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0913;AVGPOST=0.9978;RSQ=0.9884;ERATE=0.0008;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 201419594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0896;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 201419683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201419710 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7660;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201419765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0468;AVGPOST=0.9979;RSQ=0.9815;ERATE=0.0005;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201419779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6630;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201419785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0894;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 201419816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8881;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201419899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8473;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201419925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201420092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201420111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0851;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 201420118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420337 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8298;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201420389 . GA G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0003;THETA=0.0030;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201420521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201420526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7944;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201420530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9985;RSQ=0.9430;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201420537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3601;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0010;THETA=0.0007;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 201420638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201420746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2701;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 201420779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.5939;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201420823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7270;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201420875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201420964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201421005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9981;RSQ=0.9684;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201421010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201421103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201421106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0291;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201421171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.4002;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4343;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421437 . TG T 212 PASS INDEL;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0074;AVGPOST=0.9938;RSQ=0.6470;ERATE=0.0012;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201421495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201421507 . C CA 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4734;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421584 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201421636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0292;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201421647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201421648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7583;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201421741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4824;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201421771 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2492;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201421905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2718;AVGPOST=0.9956;RSQ=0.9908;ERATE=0.0006;THETA=0.0005;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 201421942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201422046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201422098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8751;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201422110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201422165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7901;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201422171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.8992;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201422300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0282;AVGPOST=0.9982;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201422304 . GT G 270 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8136;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201422343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201422461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201422468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422498 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6197;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422609 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201422643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0292;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201422690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201422745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201422756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8657;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201422843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201422859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201422878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8596;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201422987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201423057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0692;AVGPOST=0.9968;RSQ=0.9813;ERATE=0.0004;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 201423251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6876;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201423345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4105;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0007;THETA=0.0004;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 201423362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9346;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201423371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0293;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0004;THETA=0.0017;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201423492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201423562 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5643;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201423626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201423637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201423656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201423858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201423904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7440;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201423950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0243;AVGPOST=0.9969;RSQ=0.9590;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201424004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7666;ERATE=0.0011;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201424063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201424083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201424295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9322;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201424304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201424843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5230;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201424851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3309;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0006;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 201424862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8748;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201424866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0303;AVGPOST=0.9974;RSQ=0.9671;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201424977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9163;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201424998 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201425075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201425141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0294;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201425198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201425199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7414;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201425271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8115;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201425473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201425474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9582;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201425501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201425625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201425801 . C CA 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201425957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201425973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8986;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201425980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6352;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201425986 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2766;AVGPOST=0.9958;RSQ=0.9917;ERATE=0.0005;THETA=0.0006;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 201426240 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9082;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201426274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2786;AVGPOST=0.9968;RSQ=0.9938;ERATE=0.0004;THETA=0.0002;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 201426276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201426285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8179;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201426337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8243;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201426399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201426660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201426661 rs35794186 A AT 151 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9614;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201426683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0898;AVGPOST=0.9977;RSQ=0.9906;ERATE=0.0002;THETA=0.0008;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 201426702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0003;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201426809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9988;RSQ=0.9715;ERATE=0.0003;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201426838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201426881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7781;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201426892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0107;AVGPOST=0.9967;RSQ=0.8927;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201427048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6908;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201427079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9676;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201427114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201427120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201427153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201427186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201427192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0002;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201427239 . T TA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201427304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6856;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201427312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6412;ERATE=0.0005;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201427393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7662;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201427871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201427883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9541;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201427940 . TG T 6578 PASS INDEL;BAVGPOST=0.992;BRSQ=0.910;LDAF=0.0433;AVGPOST=0.9883;RSQ=0.8906;ERATE=0.0005;THETA=0.0036;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 201428017 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201428131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201428183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7042;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201428274 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5640;AVGPOST=0.9948;RSQ=0.9912;ERATE=0.0009;THETA=0.0003;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 201428295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201428353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5819;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201428365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0055;AVGPOST=0.9948;RSQ=0.6592;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201428382 rs35645424 TA T 37 PASS INDEL;BAVGPOST=0.920;BRSQ=0.104;LDAF=0.1244;AVGPOST=0.8130;RSQ=0.3309;ERATE=0.0096;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 201428443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201428531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5439;AVGPOST=0.9955;RSQ=0.9924;ERATE=0.0007;THETA=0.0006;AC=1189;AN=2184 GT:DS:GL:BD 0.54441392 1
1 201428572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0199;AVGPOST=0.9976;RSQ=0.9507;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201428708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9808;ERATE=0.0003;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201428720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0259;AVGPOST=0.9989;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201428770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8884;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201428780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9758;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201428807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8715;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201428904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8962;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201428919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201429008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9436;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201429012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0142;AVGPOST=0.9986;RSQ=0.9541;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201429344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.800;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9128;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201429373 . TA T 2645 PASS INDEL;BAVGPOST=0.903;BRSQ=0.824;LDAF=0.3209;AVGPOST=0.8730;RSQ=0.8073;ERATE=0.0066;THETA=0.0004;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 201429386 . AT A 35524 PASS INDEL;BAVGPOST=0.972;BRSQ=0.956;LDAF=0.4344;AVGPOST=0.9880;RSQ=0.9817;ERATE=0.0010;THETA=0.0017;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 201429387 . GC G 2265 PASS INDEL;BAVGPOST=0.899;BRSQ=0.825;LDAF=0.3397;AVGPOST=0.8652;RSQ=0.8031;ERATE=0.0083;THETA=0.0002;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 201429391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9334;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201429445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201429567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201429584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201429700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201429830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8919;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201429864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201429901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6785;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201429956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9342;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201430458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9549;ERATE=0.0005;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201430531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0071;AVGPOST=0.9917;RSQ=0.5546;ERATE=0.0010;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201430547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1035;AVGPOST=0.9938;RSQ=0.9747;ERATE=0.0007;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 201430613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8000;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201430635 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9003;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201430645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8193;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201430685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201430689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.907;LDAF=0.0985;AVGPOST=0.9907;RSQ=0.9634;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 201430696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.894;LDAF=0.0987;AVGPOST=0.9947;RSQ=0.9771;ERATE=0.0004;THETA=0.0007;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 201430706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1027;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201430760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9601;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201430789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201430820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0073;AVGPOST=0.9976;RSQ=0.8703;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201430822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8637;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201430887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201430899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201430931 . G GGA 2072 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201430937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9449;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201430957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1034;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0005;THETA=0.0008;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201430976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1035;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201431000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1140;AVGPOST=0.9951;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 201431029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8112;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201431030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8004;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201431069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201431165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1034;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0009;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201431184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201431196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5281;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201431249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201431294 . T TA 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201431366 . T TA 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201431367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0470;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201431397 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201431536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7917;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201431556 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1035;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201431561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3959;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 201431573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201431595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.965;LDAF=0.1020;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0004;THETA=0.0012;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 201431605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5372;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201431728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9799;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201431772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1028;AVGPOST=0.9979;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201431825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4234;AVGPOST=0.9961;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 201431842 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1036;AVGPOST=0.9981;RSQ=0.9922;ERATE=0.0005;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201431866 . CAAT C 318 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9213;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201431894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7565;ERATE=0.0013;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201431899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0149;AVGPOST=0.9923;RSQ=0.7923;ERATE=0.0026;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201431929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5103;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3792;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0009;THETA=0.0012;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 201432030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1038;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201432048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7463;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201432148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8498;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201432151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1030;AVGPOST=0.9985;RSQ=0.9932;ERATE=0.0004;THETA=0.0008;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 201432181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9842;ERATE=0.0003;THETA=0.0031;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201432222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.889;LDAF=0.0884;AVGPOST=0.9833;RSQ=0.9294;ERATE=0.0004;THETA=0.0008;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 201432253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.852;LDAF=0.0821;AVGPOST=0.9758;RSQ=0.8979;ERATE=0.0005;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201432260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.637;LDAF=0.0359;AVGPOST=0.9690;RSQ=0.7004;ERATE=0.0034;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201432284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.524;LDAF=0.0185;AVGPOST=0.9818;RSQ=0.6504;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201432314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1069;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 201432393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7263;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201432431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7573;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201432504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6509;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201432573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6235;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201432589 . A AC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432615 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2846;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 201432625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8981;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201432687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201432688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5650;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201432695 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1031;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0011;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201432769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=0.9974;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201432816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1028;AVGPOST=0.9977;RSQ=0.9912;ERATE=0.0005;THETA=0.0008;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201432853 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6312;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201432865 . TA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7341;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201432924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8528;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201432961 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201433007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2850;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 201433011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0481;AVGPOST=0.9984;RSQ=0.9870;ERATE=0.0004;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 201433100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6327;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201433104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0134;AVGPOST=0.9992;RSQ=0.9705;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201433131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1024;AVGPOST=0.9977;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 201433215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2767;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 201433246 . T TA 264 PASS INDEL;BAVGPOST=0.994;BRSQ=0.688;LDAF=0.0206;AVGPOST=0.9779;RSQ=0.5884;ERATE=0.0045;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201433335 . A AT 280 PASS INDEL;BAVGPOST=0.980;BRSQ=0.757;LDAF=0.0433;AVGPOST=0.9920;RSQ=0.9319;ERATE=0.0004;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 201433465 . A AT 1241 PASS INDEL;BAVGPOST=0.989;BRSQ=0.944;LDAF=0.0913;AVGPOST=0.9931;RSQ=0.9688;ERATE=0.0007;THETA=0.0004;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201433468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201433560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4462;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201433603 . A AT 4895 PASS INDEL;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1034;AVGPOST=0.9965;RSQ=0.9858;ERATE=0.0007;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 201433717 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5101;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201433798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7230;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201433834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8447;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201433973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0061;AVGPOST=0.9968;RSQ=0.7850;ERATE=0.0005;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201433995 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5697;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201434067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201434130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7804;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201434168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0485;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0004;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 201434193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9372;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201434352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0060;AVGPOST=0.9975;RSQ=0.8245;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201434371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2964;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 201434437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4368;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201434523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4200;AVGPOST=0.9967;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 201434617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8854;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201434975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6834;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201435142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201435224 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7147;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201435284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1028;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201435318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201435368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201435381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201435449 . TA T 205 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8597;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201435451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.875;LDAF=0.0302;AVGPOST=0.9913;RSQ=0.8918;ERATE=0.0006;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201435542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201435607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0286;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0015;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201435611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201435671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7255;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201435774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201435931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3781;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201436283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.8230;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201436351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201436532 . G GTA 318 PASS INDEL;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0091;AVGPOST=0.9927;RSQ=0.6827;ERATE=0.0017;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201436552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0664;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201436709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201436710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0512;AVGPOST=0.9988;RSQ=0.9906;ERATE=0.0003;THETA=0.0010;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201436792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6789;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201436828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0510;AVGPOST=0.9980;RSQ=0.9852;ERATE=0.0005;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201436837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201436942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201437029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5606;AVGPOST=0.9953;RSQ=0.9928;ERATE=0.0010;THETA=0.0006;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 201437062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201437246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3052;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0023;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 201437273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201437347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201437589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4537;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.7413;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201437689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.504;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5210;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201437705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201437939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8846;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201437952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5503;AVGPOST=0.9949;RSQ=0.9919;ERATE=0.0004;THETA=0.0007;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 201438274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0813;AVGPOST=0.9981;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201438323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201438389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8065;ERATE=0.0003;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201438396 . A AC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438596 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3081;AVGPOST=0.9954;RSQ=0.9912;ERATE=0.0005;THETA=0.0007;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 201438605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201438702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201439199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201439474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201439489 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0129;AVGPOST=0.9987;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201439524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0130;AVGPOST=0.9984;RSQ=0.9524;ERATE=0.0003;THETA=0.0048;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201439525 . A AG 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6221;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201439627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7744;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201439629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201439706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201439757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0072;AVGPOST=0.9981;RSQ=0.8911;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201439775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9090;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201439866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8492;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201439898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201439904 . AC A 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201440008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201440072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8662;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201440186 . TA T 46 PASS INDEL;BAVGPOST=0.994;BRSQ=0.370;LDAF=0.0574;AVGPOST=0.9033;RSQ=0.3011;ERATE=0.0040;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201440357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0143;AVGPOST=0.9983;RSQ=0.9475;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201440376 . TC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201440510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8463;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201440528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9085;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201440549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2539;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 201440637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8217;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201440658 . TA T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201440663 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9183;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201440666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7114;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201440671 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8427;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201440698 . ACT A 4512 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0356;AVGPOST=0.9982;RSQ=0.9814;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201440746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201440939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1326;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 201440989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4688;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201440995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1226;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 201440996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201441060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2806;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 201441091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5517;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201441097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9867;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201441100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8062;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201441391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9293;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201441495 . AT A 1091 PASS INDEL;BAVGPOST=0.966;BRSQ=0.632;LDAF=0.0677;AVGPOST=0.9231;RSQ=0.5193;ERATE=0.0191;THETA=0.0042;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201441495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9855;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201441498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201441538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201441643 . T TC 42 PASS INDEL;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0115;AVGPOST=0.9946;RSQ=0.8303;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201441715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0517;AVGPOST=0.9931;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 201441720 . C CA 1113 PASS INDEL;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0103;AVGPOST=0.9969;RSQ=0.8858;ERATE=0.0004;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201441722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201441761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8316;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201442080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9982;RSQ=0.9741;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201442085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9360;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201442260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9454;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201442376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9228;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201442378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0059;AVGPOST=0.9961;RSQ=0.7300;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201442502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7030;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201442615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8563;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201442821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201442877 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.5005;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201443301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201443547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201443618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201443636 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201443704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0971;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0004;THETA=0.0050;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 201443776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4063;AVGPOST=0.9949;RSQ=0.9923;ERATE=0.0008;THETA=0.0004;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 201443791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201443917 . C CATT 1890 PASS INDEL;BAVGPOST=0.974;BRSQ=0.590;LDAF=0.0432;AVGPOST=0.9602;RSQ=0.6482;ERATE=0.0037;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201444034 rs5775715 A ATTG 77014 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5795;AVGPOST=0.9866;RSQ=0.9792;ERATE=0.0013;THETA=0.0008;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 201444075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201444170 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0029;AVGPOST=0.9950;RSQ=0.3719;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201444179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6111;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201444403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201444469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9380;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201444567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2082;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 201444664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2096;AVGPOST=0.9957;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 201444874 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4671;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201444898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201444958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3320;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0001;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 201444987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201445050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2071;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201445214 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201445218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0107;AVGPOST=0.9991;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201445283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4019;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201445427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201445506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1160;AVGPOST=0.9978;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201445590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201445737 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2299;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 201445740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2259;AVGPOST=0.9961;RSQ=0.9912;ERATE=0.0005;THETA=0.0006;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 201446012 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0881;AVGPOST=0.9959;RSQ=0.9769;ERATE=0.0005;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201446041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7179;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201446076 rs112615229 T TA 9249 PASS INDEL;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.0942;AVGPOST=0.9961;RSQ=0.9871;ERATE=0.0006;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 201446078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0946;AVGPOST=0.9975;RSQ=0.9911;ERATE=0.0003;THETA=0.0009;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 201446150 . TA T 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5974;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201446151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1152;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0005;THETA=0.0008;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 201446159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2096;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 201446181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2254;AVGPOST=0.9965;RSQ=0.9920;ERATE=0.0005;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 201446229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.944;LDAF=0.1294;AVGPOST=0.9928;RSQ=0.9770;ERATE=0.0004;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 201446245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.966;LDAF=0.1975;AVGPOST=0.9936;RSQ=0.9861;ERATE=0.0005;THETA=0.0037;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 201446246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2097;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 201446268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5538;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201446280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.917;LDAF=0.2033;AVGPOST=0.9692;RSQ=0.9266;ERATE=0.0074;THETA=0.0002;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 201446312 . T TG 4374 PASS INDEL;BAVGPOST=0.951;BRSQ=0.846;LDAF=0.1846;AVGPOST=0.9583;RSQ=0.8969;ERATE=0.0061;THETA=0.0011;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 201446327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3989;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201446353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201446453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2040;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 201446505 . T TA 9676 PASS INDEL;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1168;AVGPOST=0.9948;RSQ=0.9815;ERATE=0.0008;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201446586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201446604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2033;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 201446634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1906;AVGPOST=0.9925;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 201446681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1904;AVGPOST=0.9935;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 201446682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201446700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1640;AVGPOST=0.9967;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 201446728 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5726;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201446830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1580;AVGPOST=0.9950;RSQ=0.9870;ERATE=0.0010;THETA=0.0002;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 201446834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0697;AVGPOST=0.9985;RSQ=0.9929;ERATE=0.0003;THETA=0.0036;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 201446858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201446894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0358;AVGPOST=0.9979;RSQ=0.9800;ERATE=0.0003;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201447007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201447036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1175;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 201447049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201447060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5835;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201447117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201447274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.4129;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201447323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201447325 . GAGA G 907 PASS INDEL;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9284;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201447402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6927;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201447571 . A AG 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7132;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201447575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6160;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201447600 . GACTT G 37132 PASS INDEL;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2221;AVGPOST=0.9915;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 201447650 rs34141258 ACTTC A 11472 PASS INDEL;BAVGPOST=0.987;BRSQ=0.968;LDAF=0.2217;AVGPOST=0.9901;RSQ=0.9788;ERATE=0.0004;THETA=0.0024;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 201447655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201447749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201447953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9263;ERATE=0.0002;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201447964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201448306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6498;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201448419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201448433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201448440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201448481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201448592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6144;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201448696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201448753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1454;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 201448791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8449;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201448809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0223;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0002;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201448951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1467;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 201449069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7162;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201449109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201449135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201449145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201449194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8312;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201449343 rs71714436 TA T 12208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1456;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 201449411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0346;AVGPOST=0.9987;RSQ=0.9881;ERATE=0.0002;THETA=0.0009;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201449466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8443;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201449564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201449591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9021;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201449697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2678;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0008;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 201449701 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201449763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7873;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201449852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201449920 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5000;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 201449967 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201449987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201450059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9208;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201450086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6831;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201450173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201450225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5908;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201450486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8727;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201450531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.1863;AVGPOST=0.9950;RSQ=0.9881;ERATE=0.0006;THETA=0.0006;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 201450544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201450822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201451065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201451076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201451429 . G GC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5820;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201451510 . GT G 7184 PASS INDEL;BAVGPOST=0.969;BRSQ=0.952;LDAF=0.4817;AVGPOST=0.9752;RSQ=0.9641;ERATE=0.0007;THETA=0.0007;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 201451579 rs80108985 TG T 33482 PASS INDEL;BAVGPOST=0.973;BRSQ=0.962;LDAF=0.4872;AVGPOST=0.9806;RSQ=0.9713;ERATE=0.0006;THETA=0.0045;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 201451580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0134;AVGPOST=0.9952;RSQ=0.8511;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201451612 . T TC 537 PASS INDEL;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0181;AVGPOST=0.9965;RSQ=0.9247;ERATE=0.0006;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201451624 . T TC 25 PASS INDEL;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0152;AVGPOST=0.9922;RSQ=0.8156;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201451627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201451730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201451733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5040;AVGPOST=0.9686;RSQ=0.9525;ERATE=0.0062;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 201451819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4400;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201451820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0196;AVGPOST=0.9980;RSQ=0.9649;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201451863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9131;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201451902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0058;AVGPOST=0.9980;RSQ=0.8610;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201451969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201452033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0679;AVGPOST=0.9983;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 201452090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4723;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201452216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201452568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7969;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201452626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.6057;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201452657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6622;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201452787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0065;AVGPOST=0.9921;RSQ=0.5751;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201452819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4757;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201452820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.5905;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201452909 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201453173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7746;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201453201 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201453315 . TC T 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6546;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201453364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6887;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201453420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5081;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201453569 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201453640 . CA C 1459 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9090;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201453659 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201453663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201453727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201453790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8957;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201453883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.7948;ERATE=0.0012;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201453895 rs10701115 C CATCT 1866 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201453950 rs72227080 T TA 113 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8750;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201453954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201453988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201454517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201454613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7907;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201454711 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201454774 . GA G 134 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6005;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201454778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9068;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201454904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201455123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7406;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201455188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7749;AVGPOST=0.9958;RSQ=0.9903;ERATE=0.0006;THETA=0.0003;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 201455411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201455494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7677;AVGPOST=0.9971;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 201455691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1634;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 201455741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5382;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201455804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5162;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201455882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0042;AVGPOST=0.9965;RSQ=0.6388;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201456026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.783;LDAF=0.0475;AVGPOST=0.9854;RSQ=0.8786;ERATE=0.0007;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201456143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201456185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201456411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201456417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3740;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0017;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 201456442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4954;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201456588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201456616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201456669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201456685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201456702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201456834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0186;AVGPOST=0.9979;RSQ=0.9530;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201456956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9630;ERATE=0.0003;THETA=0.0022;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201457033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9384;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201457196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9130;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201457199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.5497;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201457206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201457262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201457272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201457291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0080;AVGPOST=0.9973;RSQ=0.8623;ERATE=0.0014;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201457343 . C CT 1765 PASS INDEL;BAVGPOST=0.773;BRSQ=0.617;LDAF=0.4572;AVGPOST=0.7601;RSQ=0.6294;ERATE=0.0616;THETA=0.0002;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 201457367 rs72508981 T TA 59424 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7147;AVGPOST=0.9949;RSQ=0.9893;ERATE=0.0009;THETA=0.0002;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 201457369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1329;AVGPOST=0.9980;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 201457380 . GA G 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201457388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201457510 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5760;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201457610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9723;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201457675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201457712 . CA C 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6579;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201457739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201457745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201457762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9163;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201457786 . AG A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201457913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7888;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201457968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201458071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8513;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201458156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201458316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7446;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201458432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201458518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201458520 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1439;AVGPOST=0.9981;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 201458551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201458688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201458794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201458915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201458946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6823;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201458961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201459361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201459453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8130;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201459497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201459512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201459556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201459614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3738;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 201459767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9205;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201459869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201459927 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1630;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 201460382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0298;AVGPOST=0.9989;RSQ=0.9836;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201460399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201460451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7128;AVGPOST=0.9906;RSQ=0.9816;ERATE=0.0015;THETA=0.0005;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 201460495 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.926;LDAF=0.0730;AVGPOST=0.9787;RSQ=0.8842;ERATE=0.0011;THETA=0.0001;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201460581 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201460628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201460631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0124;AVGPOST=0.9971;RSQ=0.9261;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201460664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.935;LDAF=0.7436;AVGPOST=0.9388;RSQ=0.8893;ERATE=0.0046;THETA=0.0005;AC=1649;AN=2184 GT:DS:GL:BD 0.75503665 1
1 201460751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0350;AVGPOST=0.9816;RSQ=0.7843;ERATE=0.0016;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201460758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.836;LDAF=0.0109;AVGPOST=0.9947;RSQ=0.7776;ERATE=0.0008;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201460873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5082;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201461048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.431;LDAF=0.0044;AVGPOST=0.9939;RSQ=0.4231;ERATE=0.0011;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201461069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1273;AVGPOST=0.9947;RSQ=0.9808;ERATE=0.0005;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201461162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.498;LDAF=0.0076;AVGPOST=0.9965;RSQ=0.8159;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201461223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0154;AVGPOST=0.9952;RSQ=0.8587;ERATE=0.0006;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201461262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9562;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201461283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201461466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0501;AVGPOST=0.9990;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 201461478 . G GT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3535;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201461503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7145;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201461690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201461702 . A AT 544 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201461779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7819;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0006;THETA=0.0008;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 201461782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6891;ERATE=0.0018;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201461856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201461857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7337;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0007;THETA=0.0008;AC=1603;AN=2184 GT:DS:GL:BD 0.73397434 1
1 201462002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201462018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201462198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201462221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9374;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201462240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6295;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201462242 . G GT 114 PASS INDEL;BAVGPOST=0.987;BRSQ=0.494;LDAF=0.0318;AVGPOST=0.9580;RSQ=0.4620;ERATE=0.0074;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201462323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.4567;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201462346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9284;ERATE=0.0005;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201462413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201462422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9451;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201462536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.908;LDAF=0.1123;AVGPOST=0.9826;RSQ=0.9378;ERATE=0.0022;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 201462578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9365;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201462643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201462721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0005;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201462775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9048;ERATE=0.0005;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201462935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9207;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201462973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201463271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7536;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201463298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201463368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4527;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463437 . TTTTG T 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1247;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0004;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201463465 . ATC A 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8868;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201463534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201463649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6331;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201463703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.560;LDAF=0.0351;AVGPOST=0.9584;RSQ=0.5280;ERATE=0.0119;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201463739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5450;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201463780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201463879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6145;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201464037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201464073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1256;AVGPOST=0.9981;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 201464105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201464112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201464245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201464370 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201464391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201464406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9518;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201464436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9664;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201464465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0985;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 201464547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7698;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201464548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201464590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201464887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1244;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0011;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201464972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.724;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8043;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201465022 . AC A 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7528;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201465166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.578;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.6088;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201465204 . G GT 9034 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1303;AVGPOST=0.9858;RSQ=0.9530;ERATE=0.0026;THETA=0.0008;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 201465245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6276;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201465299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201465371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4757;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201465468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8536;ERATE=0.0005;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201465522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7470;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201465538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7313;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201465669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201465738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2404;AVGPOST=0.9865;RSQ=0.9744;ERATE=0.0015;THETA=0.0018;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 201465821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3243;AVGPOST=0.9910;RSQ=0.9850;ERATE=0.0017;THETA=0.0008;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 201465871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6692;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201465873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8585;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201465915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7420;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201466197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201466274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5438;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2600;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 201466312 . CA C 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5697;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201466481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466590 . A ACTTATTT 485 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4170;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201466694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201466758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0360;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201466794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201466899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9113;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201467044 . CT C 6184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201467062 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201467077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2522;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 201467113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6058;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201467116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0103;AVGPOST=0.9961;RSQ=0.8604;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201467240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201467396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2276;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0006;THETA=0.0007;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 201467455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201467683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5244;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201467747 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201467789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7122;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201467817 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8868;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201467841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4602;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201467931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0332;AVGPOST=0.9964;RSQ=0.9640;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201467943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0180;AVGPOST=0.9988;RSQ=0.9718;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201467960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0187;AVGPOST=0.9992;RSQ=0.9806;ERATE=0.0004;THETA=0.0013;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201468142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201468210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7502;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201468253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0250;AVGPOST=0.9991;RSQ=0.9845;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201468341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6010;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201468384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5234;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201468567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2277;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0005;THETA=0.0001;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 201468580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7038;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201468633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201468709 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201468807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0183;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201469027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201469035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201469039 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7430;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201469071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9478;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201469077 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201469129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.4368;AVGPOST=0.9854;RSQ=0.9775;ERATE=0.0025;THETA=0.0005;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 201469194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201469276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2061;AVGPOST=0.9950;RSQ=0.9904;ERATE=0.0015;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201469377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201469449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201469512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201469549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6305;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201469585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201469590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201469625 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7268;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201469627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9982;RSQ=0.9396;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201469795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8037;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201469802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201469843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7332;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201469849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0191;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0005;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201469893 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201470116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9782;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201470147 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2065;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201470200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201470231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6010;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201470268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6869;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201470285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2065;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201470375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201470437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9842;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201470501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201470719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201470730 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8431;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201470788 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201471209 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201471228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201471245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9386;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201471364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201471377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6694;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201471486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4429;AVGPOST=0.9956;RSQ=0.9931;ERATE=0.0006;THETA=0.0003;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 201471496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5960;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201471547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3506;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201471649 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3365;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0005;THETA=0.0006;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 201471698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0767;AVGPOST=0.9974;RSQ=0.9879;ERATE=0.0003;THETA=0.0010;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 201471707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8345;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201471783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6978;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 201471826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201471833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201471841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201471892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9289;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201471910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201472004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201472033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201472088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2453;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 201472106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472154 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9255;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201472215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7146;ERATE=0.0009;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201472484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.7332;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201472538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201472630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2395;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 201472658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7573;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201472826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6911;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 201472872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8686;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201472922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6908;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 201473107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0189;AVGPOST=0.9993;RSQ=0.9852;ERATE=0.0002;THETA=0.0016;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201473158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201473324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9529;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201473519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.958;LDAF=0.2934;AVGPOST=0.9919;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 201473537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201473644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201473679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201473776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201473780 . C CA 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201474126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6051;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201474135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8341;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201474209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6707;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201474329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201474564 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201474615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.6141;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201474629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201474700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201474840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0123;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201474903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6525;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201474929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201475048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201475163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201475276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8438;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201475291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201475372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0047;AVGPOST=0.9970;RSQ=0.7765;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201475428 . G GT 8901 PASS INDEL;BAVGPOST=0.875;BRSQ=0.681;LDAF=0.7683;AVGPOST=0.8656;RSQ=0.7307;ERATE=0.0123;THETA=0.0003;AC=1683;AN=2184 GT:DS:GL:BD 0.77060437 1
1 201475486 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9720;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201475496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5645;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201475507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6987;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201475537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9651;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201475723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5809;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201475797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201475886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201476075 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6956;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 201476092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201476148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0453;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 201476301 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201476343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9552;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201476464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201476467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201476580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2646;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0004;THETA=0.0001;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 201476655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7563;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201476658 . G GC 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201476685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9970;RSQ=0.8619;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201476809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0046;AVGPOST=0.9944;RSQ=0.5287;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201476909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.504;LDAF=0.0080;AVGPOST=0.9946;RSQ=0.7103;ERATE=0.0007;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201477008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201477086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7108;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201477235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201477277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9896;AVGPOST=0.9993;RSQ=0.9693;ERATE=0.0004;THETA=0.0004;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 201477280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201477316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4606;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 201477352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2716;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 201477388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201477392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201477403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201477450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7234;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201477518 . AT A 256 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8085;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201477611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201477698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0104;AVGPOST=0.9975;RSQ=0.9011;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201477791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201478053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201478108 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3294;AVGPOST=0.9975;RSQ=0.9966;ERATE=0.0005;THETA=0.0006;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 201478330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3278;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 201478382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201478396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201478426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201478443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1453;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0002;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 201478496 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201478522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201478560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1555;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 201478606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.5929;ERATE=0.0014;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201478675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8709;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201478752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201478941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.3257;AVGPOST=0.9943;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 201479095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3084;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 201479210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7469;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201479232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7370;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201479289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8416;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201479327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9910;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201479456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.840;LDAF=0.0130;AVGPOST=0.9951;RSQ=0.8536;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201479457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201479463 . GA G 827 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9303;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201479479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201479619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201479625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7565;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201479812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201479851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201479875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8911;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201479957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201480053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6116;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201480085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201480108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2724;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 201480118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8579;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201480178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201480317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9561;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201480349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1098;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 201480462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201480481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201480525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.937;LDAF=0.0980;AVGPOST=0.9886;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 201480542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6270;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201480573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6913;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201480577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9963;RSQ=0.8724;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201480600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0071;AVGPOST=0.9964;RSQ=0.8088;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201480620 . GA G 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7253;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201480727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9101;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201480731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201480733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1448;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 201480768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5111;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201480880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.811;LDAF=0.0116;AVGPOST=0.9974;RSQ=0.9040;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201481058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201481248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201481250 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9195;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201481281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1987;AVGPOST=0.9884;RSQ=0.9737;ERATE=0.0011;THETA=0.0059;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 201481410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9652;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201481416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8647;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201481430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9145;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201481490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201481591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4071;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 201481760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4071;AVGPOST=0.9965;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 201481772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9042;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201481807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201481839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0588;AVGPOST=0.9989;RSQ=0.9916;ERATE=0.0002;THETA=0.0019;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 201481851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9055;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201481893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0912;AVGPOST=0.9981;RSQ=0.9920;ERATE=0.0002;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 201481928 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8872;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201481962 rs35294364 A AT 31819 PASS INDEL;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3283;AVGPOST=0.9856;RSQ=0.9749;ERATE=0.0023;THETA=0.0013;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 201482087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7705;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201482211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201482229 . TTC T 1280 PASS INDEL;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0124;AVGPOST=0.9982;RSQ=0.9486;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201482349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201482355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.2526;AVGPOST=0.9931;RSQ=0.9847;ERATE=0.0015;THETA=0.0005;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 201482391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201482443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.6651;AVGPOST=0.9963;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 201482575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201482638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5459;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201482668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201482675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.9964;AVGPOST=0.9975;RSQ=0.7501;ERATE=0.0004;THETA=0.0009;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 201482709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0067;AVGPOST=0.9982;RSQ=0.8892;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201482717 . TCTTGC T 187 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7953;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201482763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5851;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201482808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201482817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201482858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201482922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201482998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3253;AVGPOST=0.9954;RSQ=0.9918;ERATE=0.0006;THETA=0.0057;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 201483038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201483073 . G GA 208 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9261;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201483227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7949;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201483237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.934;LDAF=0.1208;AVGPOST=0.9947;RSQ=0.9798;ERATE=0.0008;THETA=0.0008;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 201483265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.865;LDAF=0.1328;AVGPOST=0.9488;RSQ=0.8289;ERATE=0.0056;THETA=0.0008;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201483285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201483468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1882;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 201483861 . A AT 32 PASS INDEL;BAVGPOST=0.998;BRSQ=0.553;LDAF=0.0039;AVGPOST=0.9948;RSQ=0.4285;ERATE=0.0011;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201483970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9661;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201484011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201484139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201484278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9529;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201484391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201484456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9030;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=1972;AN=2184 GT:DS:GL:BD 0.90293038 1
1 201484491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 201484509 . CTT C 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201484512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201484616 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201484741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7252;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201484824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201484837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201485165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201485228 . A AC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201485366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201485455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9472;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201485456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1885;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 201485727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201485899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9032;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201485919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201485927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6825;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201485933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7979;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201486033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201486101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201486113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7076;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201486172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201486289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201486388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3625;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201486486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6516;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201486514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9613;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201486583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6333;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201486772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.645;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4644;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201486823 . G GT 71 PASS INDEL;BAVGPOST=0.997;BRSQ=0.506;LDAF=0.0064;AVGPOST=0.9925;RSQ=0.5464;ERATE=0.0013;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201487074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1872;AVGPOST=0.9971;RSQ=0.9928;ERATE=0.0004;THETA=0.0008;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 201487141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5587;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201487280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7519;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201487317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9428;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201487437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8953;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201487567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201487613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9076;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201487615 . TAA T 278 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8662;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201487779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8833;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201487839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9686;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201488018 . AC A 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201488050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8955;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201488052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201488060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201488070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6289;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488085 . C CCTAG 313 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7912;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201488115 . CAGTT C 340 PASS INDEL;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9519;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201488270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201488298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8236;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201488313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8401;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201488320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5015;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0052;AVGPOST=0.9974;RSQ=0.7861;ERATE=0.0004;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201488421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.5378;AVGPOST=0.9904;RSQ=0.9861;ERATE=0.0014;THETA=0.0005;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201488452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.448;LDAF=0.0085;AVGPOST=0.9898;RSQ=0.5670;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201488515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.7428;AVGPOST=0.9532;RSQ=0.9242;ERATE=0.0050;THETA=0.0005;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 201488524 rs11427440 C CA 744 PASS INDEL;BAVGPOST=0.583;BRSQ=0.148;LDAF=0.3171;AVGPOST=0.6538;RSQ=0.3161;ERATE=0.0344;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201488527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1351;AVGPOST=0.9829;RSQ=0.9483;ERATE=0.0008;THETA=0.0015;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 201488541 . A AT 4478 PASS INDEL;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.1311;AVGPOST=0.9880;RSQ=0.9627;ERATE=0.0005;THETA=0.0016;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 201488541 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1303;AVGPOST=0.9902;RSQ=0.9694;ERATE=0.0005;THETA=0.0008;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 201488546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0314;AVGPOST=0.9986;RSQ=0.9806;ERATE=0.0005;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201488571 . AC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201488927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201488947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201488972 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201489142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201489171 rs34860825 G GCT 84226 PASS INDEL;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7561;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0005;THETA=0.0006;AC=1651;AN=2184 GT:DS:GL:BD 0.75595236 1
1 201489571 rs71691124 C CTCT 79038 PASS INDEL;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7555;AVGPOST=0.9943;RSQ=0.9898;ERATE=0.0005;THETA=0.0005;AC=1648;AN=2184 GT:DS:GL:BD 0.75457877 1
1 201489572 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5396;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0037;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201489624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201489695 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201489755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201489775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201489853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6675;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201489873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.6421;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201489880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.625;LDAF=0.0076;AVGPOST=0.9937;RSQ=0.6855;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201489889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5187;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201489896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201490133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5396;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201490141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.9042;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201490210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8679;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201490220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201490306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 201490360 . TCTTG T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4328;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201490511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201490546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201490560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201490687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8286;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201490970 . TC T 33493 PASS INDEL;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.8530;AVGPOST=0.9736;RSQ=0.9194;ERATE=0.0053;THETA=0.0005;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 201491075 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7872;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201491169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201491255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201491260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6951;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201491293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201491308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201491323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201491335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8630;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 201491537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201491675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7797;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201491968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8630;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 201492143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7873;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201492283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5400;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201492312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8332;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=1820;AN=2184 GT:DS:GL:BD 0.83333331 1
1 201492347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0081;AVGPOST=0.9965;RSQ=0.8346;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201492468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5110;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201492499 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5128;AVGPOST=0.9940;RSQ=0.9916;ERATE=0.0012;THETA=0.0005;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 201492561 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.683;LDAF=0.0091;AVGPOST=0.9971;RSQ=0.8691;ERATE=0.0008;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201492621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0713;AVGPOST=0.9975;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 201492624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4332;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201492652 . AATATTTCTCACTACTT A 21922 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0772;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0004;THETA=0.0007;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 201492693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5141;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201492825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5865;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201492852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7004;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201492872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7565;ERATE=0.0010;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201493094 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8867;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201493125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0089;AVGPOST=0.9954;RSQ=0.8202;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201493291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201493342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8635;AVGPOST=0.9980;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 201493367 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6416;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201493389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5754;AVGPOST=0.9954;RSQ=0.9925;ERATE=0.0004;THETA=0.0006;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 201493669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9205;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201493959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7585;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201494052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0107;AVGPOST=0.9986;RSQ=0.9508;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201494054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201494092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6350;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201494131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7258;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201494168 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4355;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7817;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201494248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0962;AVGPOST=0.9982;RSQ=0.9908;ERATE=0.0006;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 201494262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201494274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9173;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201494736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201494754 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201494941 . A AT 485 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8698;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201495024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201495051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8656;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201495119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9438;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201495170 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.4686;AVGPOST=0.9917;RSQ=0.9877;ERATE=0.0006;THETA=0.0005;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 201495298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201495299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6848;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201495367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201495383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9739;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201495437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9442;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201495468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0309;AVGPOST=0.9957;RSQ=0.9397;ERATE=0.0005;THETA=0.0015;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201495640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7075;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201495676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0163;AVGPOST=0.9846;RSQ=0.6291;ERATE=0.0013;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201495707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0050;AVGPOST=0.9975;RSQ=0.7782;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201495809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9709;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201496004 . T TA 821 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8705;ERATE=0.0008;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201496158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201496227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201496247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201496423 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201496451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201496452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7195;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201496513 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201496532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201496780 . TC T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201497156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201497253 . A AT 896 PASS INDEL;BAVGPOST=0.970;BRSQ=0.576;LDAF=0.0613;AVGPOST=0.9295;RSQ=0.5157;ERATE=0.0144;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201497274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201497431 . AT A 787 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0111;AVGPOST=0.9961;RSQ=0.8692;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201497439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.634;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201497473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4414;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201497516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201497535 . T TA 291 PASS INDEL;BAVGPOST=0.995;BRSQ=0.696;LDAF=0.0048;AVGPOST=0.9965;RSQ=0.7130;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201497563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4662;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201497654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9479;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201497658 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4168;AVGPOST=0.9904;RSQ=0.9845;ERATE=0.0008;THETA=0.0006;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 201497741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8428;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201497777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9068;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201497990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5557;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201498159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9988;RSQ=0.9750;ERATE=0.0004;THETA=0.0016;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201498297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7826;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201498313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5795;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201498356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5744;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201498388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6788;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201498446 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5955;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201498481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7826;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201498563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8566;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201498631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0579;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 201498863 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201498885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201498944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201498974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5462;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201499017 . TG T 767 PASS INDEL;BAVGPOST=0.883;BRSQ=0.480;LDAF=0.1728;AVGPOST=0.8243;RSQ=0.5076;ERATE=0.0468;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 201499050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201499180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6725;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201499423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9974;RSQ=0.9025;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201499681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5547;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201499694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9677;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201499740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7161;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201499791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4489;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201499806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9660;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201499816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8143;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201499829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7402;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201499863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201499873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201499959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201500160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5043;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201500445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8031;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201500449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201500577 . CT C 179 PASS INDEL;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7925;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201500613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.8796;ERATE=0.0007;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201500804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8555;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201500869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4880;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201500889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201500943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201500999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7585;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201501097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1800;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 201501187 . A ACT 404 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9600;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201501195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201501241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201501275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7404;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201501344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7037;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201501360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4802;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201501410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5840;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9580;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201501585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201501603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6651;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201501605 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0721;AVGPOST=0.9972;RSQ=0.9840;ERATE=0.0004;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201501743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201501839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6338;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 201501988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8533;AVGPOST=0.9976;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=1864;AN=2184 GT:DS:GL:BD 0.85347986 1
1 201502002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7303;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201502086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6005;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201502112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7653;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201502295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201502346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8603;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201502367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201502401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201502451 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6747;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201502601 . T TG 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7129;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201502658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201502715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5578;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201502858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201503053 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201503075 . T TG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5368;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201503083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201503123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1810;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0006;THETA=0.0002;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 201503128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7399;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201503316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7552;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201503405 . CT C 1005 PASS INDEL;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0126;AVGPOST=0.9962;RSQ=0.8777;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201503452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6548;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201503461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201503474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7394;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201503480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5680;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201503531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6431;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201503605 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6738;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201503660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6633;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201503695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9407;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201503745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5832;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201503787 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6331;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 201503811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201504034 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3163;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 201504065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2762;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 201504140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.3241;AVGPOST=0.9940;RSQ=0.9902;ERATE=0.0014;THETA=0.0002;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 201504252 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3069;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0012;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 201504294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201504350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5462;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201504419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201504456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201504624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0219;AVGPOST=0.9986;RSQ=0.9724;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201504684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201504746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201504748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201504804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3909;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201504853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201504860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201504877 . CAT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201504880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201505008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201505186 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201505241 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5889;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201505268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201505270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6115;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201505392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9314;AVGPOST=0.9979;RSQ=0.9847;ERATE=0.0005;THETA=0.0006;AC=2036;AN=2184 GT:DS:GL:BD 0.93223441 1
1 201505404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2762;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 201505405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4865;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201505533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6872;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201505652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201505665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201505884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.3678;AVGPOST=0.9594;RSQ=0.9339;ERATE=0.0134;THETA=0.0003;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 201505975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.906;LDAF=0.2282;AVGPOST=0.9709;RSQ=0.9410;ERATE=0.0016;THETA=0.0006;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 201506172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.948;LDAF=0.2458;AVGPOST=0.9747;RSQ=0.9527;ERATE=0.0018;THETA=0.0002;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 201506194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0141;AVGPOST=0.9949;RSQ=0.8586;ERATE=0.0007;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201506346 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2652;AVGPOST=0.9922;RSQ=0.9850;ERATE=0.0006;THETA=0.0006;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 201506396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6874;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201506439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5308;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201506440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3515;AVGPOST=0.9952;RSQ=0.9907;ERATE=0.0011;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 201506474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6517;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201506563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3909;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201506651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.529;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5591;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201506696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.954;LDAF=0.9186;AVGPOST=0.9950;RSQ=0.9730;ERATE=0.0013;THETA=0.0002;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 201506697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3908;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201506717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9145;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201506795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8968;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201506855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201506923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201506940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0003;THETA=0.0038;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201506970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8312;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201507009 MERGED_DEL_2_4405 TGCCTGTATCCCCATTGTACCTAGGAAGTAACTAACCTGCTTTTGATTTTACAGGCTCATAGGCAGAAGGGAATTTCCTTGTCTCAGATGAGACTTTGGACTGTGGACTTTTGAGTTAATGCTGAAATGAGTTAAGACTTTGGGGTACTGTTGGGAAGGCATGATTGTGTTTTGAAATATAAGGATGTGA T . . SV;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0133;AVGPOST=0.9985;RSQ=0.9465;ERATE=0.0005;THETA=0.0006;CIEND=-19;31;CIPOS=-25;19;END=96997215;HOMLEN=3;HOMSEQ=GCC;SOURCE=EMBLdelly_96996377_96997216;Gen GT:DS:GL:BD 0.01282051 0
1 201507068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201507230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0234;AVGPOST=0.9978;RSQ=0.9633;ERATE=0.0002;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201507321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4000;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 201507362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201507378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.9309;AVGPOST=0.9965;RSQ=0.9811;ERATE=0.0004;THETA=0.0002;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 201507452 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5996;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201507462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3533;AVGPOST=0.9914;RSQ=0.9861;ERATE=0.0007;THETA=0.0004;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 201507485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0095;AVGPOST=0.9974;RSQ=0.8828;ERATE=0.0006;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201507534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.9315;AVGPOST=0.9974;RSQ=0.9835;ERATE=0.0004;THETA=0.0021;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 201507560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4020;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0005;THETA=0.0006;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 201507621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9542;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201507836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201507928 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201507946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9328;AVGPOST=0.9988;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 201508007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201508102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201508163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9320;AVGPOST=0.9984;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 201508253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0408;AVGPOST=0.9990;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 201508325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2673;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 201508346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9059;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201508416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201508499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8430;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201508535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9062;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201508549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4132;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201508603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201508614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2613;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 201508654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0141;AVGPOST=0.9990;RSQ=0.9719;ERATE=0.0002;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201508681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5406;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 201508817 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8811;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201508856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7571;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201508858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3909;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201508952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9327;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 201508957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0057;AVGPOST=0.9961;RSQ=0.7338;ERATE=0.0008;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201509005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201509016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1123;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0004;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 201509081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201509103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.6008;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201509156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201509328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7111;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201509347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4987;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201509384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8699;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201509434 . T TA 300 PASS INDEL;BAVGPOST=0.984;BRSQ=0.622;LDAF=0.0320;AVGPOST=0.9605;RSQ=0.4924;ERATE=0.0076;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201509457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0650;AVGPOST=0.9988;RSQ=0.9918;ERATE=0.0004;THETA=0.0010;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 201509477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1264;AVGPOST=0.9983;RSQ=0.9932;ERATE=0.0006;THETA=0.0021;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201509501 . A AG 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0073;AVGPOST=0.9969;RSQ=0.8252;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201509504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.365;LDAF=0.0085;AVGPOST=0.9874;RSQ=0.4611;ERATE=0.0014;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201509507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201509587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8698;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201509867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4454;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201510323 . G GT 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7392;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201510414 . G GA 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5265;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201510415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201510451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0105;AVGPOST=0.9994;RSQ=0.9736;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201510462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8672;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201510493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8053;ERATE=0.0011;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201510595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9818;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201510670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201510791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201510839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201510905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201510935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201510992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201511051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201511086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201511197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201511198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201511270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9384;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201511416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4270;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201511594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4764;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201511645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8189;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201511750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0004;THETA=0.0011;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201511860 . GGTT G 1400 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201511911 . AT A 7 PASS INDEL;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3415;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201512152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.972;LDAF=0.3637;AVGPOST=0.9679;RSQ=0.9524;ERATE=0.0007;THETA=0.0012;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 201512262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201512306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201512351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201512352 . GCC G 1334 PASS INDEL;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8370;ERATE=0.0008;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201512358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9128;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201512377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201512523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1120;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0012;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 201512538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201512636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201512720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201512754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0999;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201512762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201512810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201512822 . TA T 162 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8605;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201512925 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201513012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201513020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0645;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0012;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 201513034 . A ATGTT 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201513041 . CA C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201513042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8906;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201513061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6913;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201513101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201513115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9726;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201513294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.8137;AVGPOST=0.9954;RSQ=0.9889;ERATE=0.0005;THETA=0.0010;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 201513459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201513488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201513592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7767;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201513630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9976;RSQ=0.3352;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201513652 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7467;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201513718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201513776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5353;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201513803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9770;ERATE=0.0004;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201514039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5885;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201514274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201514279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6225;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201514294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2010;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 201514357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201514391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201514392 . TC T 69 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5891;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201514427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201514673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8536;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201514674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201514675 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201514733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0559;AVGPOST=0.9923;RSQ=0.9420;ERATE=0.0006;THETA=0.0002;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201514829 . TAG T 1129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9118;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201514880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=0.9974;RSQ=0.9890;ERATE=0.0004;THETA=0.0007;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 201514885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.9979;AVGPOST=0.9982;RSQ=0.6421;ERATE=0.0004;THETA=0.0003;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 201515135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8126;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201515150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0268;AVGPOST=0.9991;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 201515168 . AC A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7601;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201515190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9142;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201515226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8839;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201515295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201515363 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3370;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201515585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0176;AVGPOST=0.9989;RSQ=0.9765;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201515929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9479;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201515940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9425;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201515943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8339;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201515999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4444;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 201516046 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9530;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201516100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201516108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7717;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201516292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201516399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6983;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201516599 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6045;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201516626 . GTGA G 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201516706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9452;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201516710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201516714 . AGC A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7416;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201516719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0477;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0004;THETA=0.0012;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 201516729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201516920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8840;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201517074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7617;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201517363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1168;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0004;THETA=0.0005;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 201517378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201517397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4212;AVGPOST=0.9958;RSQ=0.9938;ERATE=0.0006;THETA=0.0006;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 201517450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8457;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201517579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8470;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201517626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0153;AVGPOST=0.9993;RSQ=0.9806;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201517657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6555;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201517685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201517721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.6223;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201517731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201517752 . AT A 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3942;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201517755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201517768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201517823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0143;AVGPOST=0.9968;RSQ=0.9195;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201517827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8922;ERATE=0.0003;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201517880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201517936 . AG A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201518048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9226;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201518152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201518314 rs72429663 GCA G 1147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201518363 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8669;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201518670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0076;AVGPOST=0.9911;RSQ=0.5199;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201518876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0195;AVGPOST=0.9947;RSQ=0.8963;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201518960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0034;AVGPOST=0.9941;RSQ=0.4265;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201519045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8914;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201519103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6568;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201519207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6798;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201519261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0007;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 201519514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201519631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201519643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201519687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201519697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201519711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201519918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201519943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9751;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201519957 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7084;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201519968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201520234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201520272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201520362 . G GT 682 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.8856;ERATE=0.0006;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201520452 . T TA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201520562 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 201520696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201520739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9988;RSQ=0.9523;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201520810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201520853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201520885 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201520887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201521005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1117;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 201521038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8790;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201521109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4492;AVGPOST=0.9972;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 201521287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201521363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7717;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201521378 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3052;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201521381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201521389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201521478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6891;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201521604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9661;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201521656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4719;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201521791 . G GT 172 PASS INDEL;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7620;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201521920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8688;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201521937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0317;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201522022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1154;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 201522080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201522514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201522621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.8992;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201522652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0192;AVGPOST=0.9993;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201522671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201522705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201522884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201522968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201523033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201523081 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201523101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201523112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201523119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201523367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1178;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 201523414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4524;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 201523460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523558 . C CA 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.8009;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201523607 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201523613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201523629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201523762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.7242;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201523792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523809 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4396;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 201523885 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201523888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201523896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201523958 . TGA T 44 PASS INDEL;BAVGPOST=0.992;BRSQ=0.644;LDAF=0.0159;AVGPOST=0.9831;RSQ=0.5712;ERATE=0.0081;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201523987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9759;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201524018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1136;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 201524047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0045;AVGPOST=0.9946;RSQ=0.5815;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201524174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5091;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201524390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4461;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 201524439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201524471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201524489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201524707 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.9961;AVGPOST=0.9953;RSQ=0.5940;ERATE=0.0003;THETA=0.0005;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 201524899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9218;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201524929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201524978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201525043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8704;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201525106 . AT A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6407;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201525175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7585;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201525210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201525278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5228;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201525564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9781;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201525603 . TC T 95 PASS INDEL;BAVGPOST=0.976;BRSQ=0.465;LDAF=0.0412;AVGPOST=0.9430;RSQ=0.4274;ERATE=0.0136;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201525671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6708;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201525699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5024;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 201525755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201525775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9036;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201525804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201525821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3793;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201525900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4965;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 201525963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9056;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201526068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5893;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201526271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4834;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 201526362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9793;AVGPOST=0.9983;RSQ=0.9716;ERATE=0.0004;THETA=0.0002;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 201526366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201526620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1171;AVGPOST=0.9978;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 201526641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6271;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201526645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.645;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201526706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0153;AVGPOST=0.9960;RSQ=0.8971;ERATE=0.0006;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201526799 rs35127282 G GTA 41382 PASS INDEL;BAVGPOST=0.955;BRSQ=0.912;LDAF=0.3263;AVGPOST=0.9691;RSQ=0.9542;ERATE=0.0004;THETA=0.0006;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 201526849 . T TAC 8953 PASS INDEL;BAVGPOST=0.952;BRSQ=0.889;LDAF=0.2878;AVGPOST=0.9454;RSQ=0.9019;ERATE=0.0084;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 201526858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201526967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201527018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3867;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0008;THETA=0.0007;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 201527065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6410;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201527099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5082;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0006;THETA=0.0006;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 201527245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3472;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 201527272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201527274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8711;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201527338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201527340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201527623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5595;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201527697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201527750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0175;AVGPOST=0.9968;RSQ=0.9190;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201527758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4803;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0006;THETA=0.0009;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 201527763 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9225;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201527774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201527847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8418;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201527852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201527955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6046;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201528131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0129;AVGPOST=0.9985;RSQ=0.9481;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201528300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0140;AVGPOST=0.9958;RSQ=0.8810;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201528369 . GAC G 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201528394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8392;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201528454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9326;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201528589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9693;ERATE=0.0004;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201528649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201528686 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201528713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201528754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9790;AVGPOST=0.9988;RSQ=0.9757;ERATE=0.0006;THETA=0.0005;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 201528819 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5029;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 201528850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9631;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 201528892 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201528947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1445;AVGPOST=0.9903;RSQ=0.9703;ERATE=0.0004;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 201528972 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201529232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201529237 . CT C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4345;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201529498 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8133;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201529570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201529793 . G GAATA 211 PASS INDEL;BAVGPOST=0.988;BRSQ=0.161;LDAF=0.1117;AVGPOST=0.8329;RSQ=0.3228;ERATE=0.0046;THETA=0.0115;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 201529903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.934;LDAF=0.0759;AVGPOST=0.9856;RSQ=0.9207;ERATE=0.0004;THETA=0.0169;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201530021 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.944;LDAF=0.0848;AVGPOST=0.9887;RSQ=0.9444;ERATE=0.0011;THETA=0.0129;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201530089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.923;LDAF=0.0768;AVGPOST=0.9856;RSQ=0.9284;ERATE=0.0003;THETA=0.0210;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 201530113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0190;AVGPOST=0.9955;RSQ=0.9098;ERATE=0.0003;THETA=0.0116;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201530141 . G GT 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0058;AVGPOST=0.9926;RSQ=0.5131;ERATE=0.0016;THETA=0.0326;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201530187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.498;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7171;ERATE=0.0010;THETA=0.0224;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201530200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.699;LDAF=0.0064;AVGPOST=0.9936;RSQ=0.6277;ERATE=0.0006;THETA=0.0122;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201530239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.883;LDAF=0.0605;AVGPOST=0.9861;RSQ=0.9067;ERATE=0.0004;THETA=0.0210;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 201530262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0004;THETA=0.0125;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201530303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7211;ERATE=0.0016;THETA=0.0237;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201530399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0151;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201530408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.925;LDAF=0.5094;AVGPOST=0.9458;RSQ=0.9304;ERATE=0.0289;THETA=0.0091;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 201530465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.951;LDAF=0.5580;AVGPOST=0.9660;RSQ=0.9518;ERATE=0.0079;THETA=0.0273;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 201530564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6374;ERATE=0.0003;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201530594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.951;LDAF=0.4888;AVGPOST=0.9657;RSQ=0.9526;ERATE=0.0071;THETA=0.0216;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 201530676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.638;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.7819;ERATE=0.0006;THETA=0.0161;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201530850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8887;ERATE=0.0006;THETA=0.0183;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201530927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2871;AVGPOST=0.9888;RSQ=0.9793;ERATE=0.0009;THETA=0.0027;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 201530954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4132;AVGPOST=0.9871;RSQ=0.9825;ERATE=0.0004;THETA=0.0012;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 201530965 . GTAA G 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0054;AVGPOST=0.9965;RSQ=0.7323;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201530994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7075;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201531086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7947;ERATE=0.0008;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201531181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9690;ERATE=0.0004;THETA=0.0028;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201531182 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201531212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8583;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201531370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0196;AVGPOST=0.9989;RSQ=0.9787;ERATE=0.0003;THETA=0.0036;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201531402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201531427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8983;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201531435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1554;AVGPOST=0.9951;RSQ=0.9860;ERATE=0.0008;THETA=0.0017;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 201531484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201531498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1064;AVGPOST=0.9962;RSQ=0.9860;ERATE=0.0006;THETA=0.0007;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 201531508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201531529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9636;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201531563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0135;AVGPOST=0.9983;RSQ=0.9582;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201531659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8883;AVGPOST=0.9964;RSQ=0.9884;ERATE=0.0005;THETA=0.0004;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 201531718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201531876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201531877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201531944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201531962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201531980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201532091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0194;AVGPOST=0.9959;RSQ=0.9182;ERATE=0.0005;THETA=0.0024;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201532114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1488;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 201532116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4332;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 201532127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201532158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1488;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0005;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 201532182 . T TA 92 PASS INDEL;BAVGPOST=0.996;BRSQ=0.627;LDAF=0.0099;AVGPOST=0.9875;RSQ=0.5185;ERATE=0.0029;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201532206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8013;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201532267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201532269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7323;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201532303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7840;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201532344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201532389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8705;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1901;AN=2184 GT:DS:GL:BD 0.87042123 1
1 201532401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201532467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6643;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201532510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201532527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6957;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201532581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4031;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 201532613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9469;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201532675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8899;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 201532691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4058;AVGPOST=0.9959;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 201532942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6547;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201533190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6132;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201533385 . AG A 1287 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0148;AVGPOST=0.9953;RSQ=0.8646;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201533389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1191;AVGPOST=0.9963;RSQ=0.9866;ERATE=0.0006;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 201533548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5535;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201533661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.9085;AVGPOST=0.9916;RSQ=0.9669;ERATE=0.0009;THETA=0.0002;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 201533704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9724;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201533853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201534094 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4043;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0076;AVGPOST=0.9988;RSQ=0.9324;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201534337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9404;ERATE=0.0017;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201534343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534544 . ACC A 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201534732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201534735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201534774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7581;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201534905 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3067;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201534993 . CTA C 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9028;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201535103 . ATTCT A 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5867;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201535107 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201535254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201535290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201535307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201535417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201535445 . CCTT C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5964;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201535477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201535498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6749;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201535513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201535533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4748;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201535585 . CTATAA C 1619 PASS INDEL;BAVGPOST=0.995;BRSQ=0.810;LDAF=0.0116;AVGPOST=0.9972;RSQ=0.9107;ERATE=0.0003;THETA=0.0026;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201535622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1245;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 201535648 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201535936 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7295;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 201535960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201535982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.6069;ERATE=0.0002;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201536001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201536023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9565;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201536030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201536136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0117;AVGPOST=0.9987;RSQ=0.9608;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201536276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0191;AVGPOST=0.9984;RSQ=0.9678;ERATE=0.0029;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201536277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1416;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 201536302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201536352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201536355 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6861;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0010;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 201536363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0440;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0002;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201536431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9129;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201536567 rs66525419 G GA 2116 PASS INDEL;BAVGPOST=0.989;BRSQ=0.886;LDAF=0.0536;AVGPOST=0.9926;RSQ=0.9395;ERATE=0.0005;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201536644 . AACTC A 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5835;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201536649 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5668;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201536665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8765;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201536671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1478;AVGPOST=0.9960;RSQ=0.9892;ERATE=0.0009;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 201536672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5386;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201536716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1038;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 201536749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7033;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201536817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7768;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201536954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5175;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201537002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4070;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201537050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7954;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201537051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537071 . TAAAG T 4300 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0472;AVGPOST=0.9992;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201537130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9501;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201537185 . TA T 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4832;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537204 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4728;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.8016;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201537312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3934;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537380 . TAC T 477 PASS INDEL;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0210;AVGPOST=0.9932;RSQ=0.8706;ERATE=0.0007;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201537460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9608;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201537536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0970;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0002;THETA=0.0019;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 201537569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537578 . TG T 232 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7367;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201537608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.8867;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201537632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201537664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5310;AVGPOST=0.9972;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 201537748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201537867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9313;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201537869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0435;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201538007 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201538070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201538196 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201538279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201538310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0010;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201538418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201538433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6034;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201538448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0435;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201538463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0942;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 201538473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0115;AVGPOST=0.9975;RSQ=0.9192;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201538681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5279;ERATE=0.0005;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201538707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0473;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201538748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201538761 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7884;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201538773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201538779 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0239;AVGPOST=0.9993;RSQ=0.9869;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201538898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201538968 . GCTC G 459 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201538978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201539114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0990;AVGPOST=0.9971;RSQ=0.9876;ERATE=0.0006;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 201539134 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8076;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201539137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3549;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201539139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0475;AVGPOST=0.9982;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201539201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0982;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0004;THETA=0.0008;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 201539253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201539273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0989;AVGPOST=0.9982;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 201539300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0980;AVGPOST=0.9983;RSQ=0.9920;ERATE=0.0005;THETA=0.0008;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 201539311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201539340 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201539364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.7211;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201539378 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6387;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201539438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8199;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201539498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1413;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 201539637 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201539648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7831;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201539752 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9340;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201539773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0274;AVGPOST=0.9980;RSQ=0.9747;ERATE=0.0003;THETA=0.0035;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201539934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1417;AVGPOST=0.9963;RSQ=0.9898;ERATE=0.0003;THETA=0.0036;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 201539935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8601;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201539998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201540061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201540190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7556;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201540443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7961;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201540454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9592;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201540507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201540508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.6846;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201540510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.0926;AVGPOST=0.9972;RSQ=0.9869;ERATE=0.0003;THETA=0.0041;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 201540513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0926;AVGPOST=0.9967;RSQ=0.9847;ERATE=0.0005;THETA=0.0014;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 201540543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0065;AVGPOST=0.9975;RSQ=0.8391;ERATE=0.0008;THETA=0.0161;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201540833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4664;AVGPOST=0.9924;RSQ=0.9886;ERATE=0.0012;THETA=0.0006;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 201541072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4349;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201541114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4346;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201541119 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4744;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0010;THETA=0.0053;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 201541128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4870;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0015;THETA=0.0004;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 201541217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4808;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0004;THETA=0.0033;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 201541245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0065;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201541351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201541414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0189;AVGPOST=0.9976;RSQ=0.9543;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201541417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201541436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201541471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6709;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201541502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0227;AVGPOST=0.9977;RSQ=0.9587;ERATE=0.0004;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201541642 rs71076509 A AT 34894 PASS INDEL;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.4648;AVGPOST=0.9594;RSQ=0.9398;ERATE=0.0056;THETA=0.0007;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 201541686 . T TC 842 PASS INDEL;BAVGPOST=0.812;BRSQ=0.595;LDAF=0.2406;AVGPOST=0.8421;RSQ=0.6727;ERATE=0.0183;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 201541692 rs33951671 GATC G 18837 PASS INDEL;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1513;AVGPOST=0.9830;RSQ=0.9534;ERATE=0.0006;THETA=0.0007;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 201541726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201541810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201541950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5025;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201542000 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542093 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0676;AVGPOST=0.9985;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 201542156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8848;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201542221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0183;AVGPOST=0.9993;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201542256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0212;AVGPOST=0.9984;RSQ=0.9690;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201542442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9986;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201542467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9602;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201542480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8811;ERATE=0.0004;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201542507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6696;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201542538 . A ATTCT 2415 PASS INDEL;BAVGPOST=0.983;BRSQ=0.890;LDAF=0.0851;AVGPOST=0.9810;RSQ=0.9142;ERATE=0.0006;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201542543 . T TTTC 2919 PASS INDEL;BAVGPOST=0.978;BRSQ=0.869;LDAF=0.0860;AVGPOST=0.9774;RSQ=0.8954;ERATE=0.0010;THETA=0.0007;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 201542551 . T TTC 2313 PASS INDEL;BAVGPOST=0.983;BRSQ=0.892;LDAF=0.0845;AVGPOST=0.9810;RSQ=0.9143;ERATE=0.0007;THETA=0.0004;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201542552 . T TC 1670 PASS INDEL;BAVGPOST=0.982;BRSQ=0.894;LDAF=0.0874;AVGPOST=0.9866;RSQ=0.9372;ERATE=0.0007;THETA=0.0055;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 201542553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.879;LDAF=0.0785;AVGPOST=0.9775;RSQ=0.8788;ERATE=0.0035;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201542554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0662;AVGPOST=0.9973;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 201542607 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6613;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201542670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201542826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8074;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201542829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8972;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201542915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6489;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201542920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0676;AVGPOST=0.9982;RSQ=0.9886;ERATE=0.0005;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 201542926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201542995 . GT G 1783 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9622;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201543144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201543307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201543459 . AAT A 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3786;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201543485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9412;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201543514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201543577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8213;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201543600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201543608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0284;AVGPOST=0.9987;RSQ=0.9800;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201543871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4626;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201543934 . A AG 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3508;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201544003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201544206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2348;AVGPOST=0.9911;RSQ=0.9830;ERATE=0.0004;THETA=0.0007;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 201544227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201544345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1349;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0004;THETA=0.0008;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 201544417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0723;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201544468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201544553 . CA C 1097 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0133;AVGPOST=0.9963;RSQ=0.8964;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201544665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0746;AVGPOST=0.9982;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 201544667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201544693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201544718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6714;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201544771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.473;LDAF=0.0060;AVGPOST=0.9941;RSQ=0.6454;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201544775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8381;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201544829 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201544855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2436;AVGPOST=0.9962;RSQ=0.9925;ERATE=0.0005;THETA=0.0004;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 201544862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2287;AVGPOST=0.9957;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 201544902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201544914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9994;RSQ=0.9807;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201544939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201544977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201545017 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2298;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0002;THETA=0.0008;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201545162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2524;AVGPOST=0.9757;RSQ=0.9524;ERATE=0.0059;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 201545241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0182;AVGPOST=0.9907;RSQ=0.8138;ERATE=0.0014;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201545247 . T TTTTTG 252 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6513;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201545249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1048;AVGPOST=0.9976;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 201545259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9678;ERATE=0.0004;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201545377 rs79401045 GA G 20585 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2305;AVGPOST=0.9967;RSQ=0.9929;ERATE=0.0008;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201545397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4336;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201545413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9985;RSQ=0.9591;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201545466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.0835;AVGPOST=0.9888;RSQ=0.9416;ERATE=0.0006;THETA=0.0003;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201545479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201545507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9731;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201545584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9983;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201545647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9320;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201545743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2295;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0010;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201545817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6145;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201545973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2347;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 201546007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0135;AVGPOST=0.9992;RSQ=0.9742;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201546010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2397;AVGPOST=0.9958;RSQ=0.9903;ERATE=0.0005;THETA=0.0009;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 201546138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2346;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201546140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201546176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201546240 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6100;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201546292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2473;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 201546306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2340;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201546325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2470;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0013;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 201546469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9200;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201546481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2300;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 201546518 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2340;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0005;THETA=0.0008;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201546536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2340;AVGPOST=0.9951;RSQ=0.9890;ERATE=0.0009;THETA=0.0006;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201546551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6060;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201546569 . GC G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5804;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201546593 . T TG 2488 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201546654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201546836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8855;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201546882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6718;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201546991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547024 . T TG 5066 PASS INDEL;BAVGPOST=0.987;BRSQ=0.968;LDAF=0.2319;AVGPOST=0.9953;RSQ=0.9896;ERATE=0.0006;THETA=0.0005;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 201547068 rs111329507 G GA 28777 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2340;AVGPOST=0.9964;RSQ=0.9920;ERATE=0.0007;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201547070 . T TTG 2337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0140;AVGPOST=0.9983;RSQ=0.9524;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201547172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2280;AVGPOST=0.9967;RSQ=0.9924;ERATE=0.0005;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 201547248 rs71592342 A AT 49035 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.6364;AVGPOST=0.9851;RSQ=0.9761;ERATE=0.0021;THETA=0.0004;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 201547294 rs71592342 C CT 52352 PASS INDEL;BAVGPOST=0.856;BRSQ=0.416;LDAF=0.8822;AVGPOST=0.8825;RSQ=0.6121;ERATE=0.0071;THETA=0.0008;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 201547298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3670;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201547311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6921;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201547375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2301;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201547390 . C CT 792 PASS INDEL;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0108;AVGPOST=0.9900;RSQ=0.6857;ERATE=0.0016;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201547417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8748;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201547516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201547524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9529;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201547600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547605 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6954;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201547624 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201547626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2345;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201547630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2340;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201547637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201547678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201547738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0065;AVGPOST=0.9967;RSQ=0.8392;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201547770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3471;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 201547819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2434;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0003;THETA=0.0015;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 201547846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2259;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 201547853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6947;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201547916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0833;AVGPOST=0.9978;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201547933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201547945 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5489;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201547968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201547982 . AG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6625;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201548015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201548118 . T TG 699 PASS INDEL;BAVGPOST=0.995;BRSQ=0.752;LDAF=0.0121;AVGPOST=0.9939;RSQ=0.7841;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201548148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0141;AVGPOST=0.9983;RSQ=0.9557;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201548198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2339;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201548203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201548213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0889;AVGPOST=0.9964;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201548245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.689;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.7824;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201548297 . C CA 98 PASS INDEL;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6928;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201548341 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6311;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201548382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4327;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0149;AVGPOST=0.9979;RSQ=0.9505;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201548440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201548507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5666;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2341;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 201548652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5118;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201548688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0064;AVGPOST=0.9976;RSQ=0.8491;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201548794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5290;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201548802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201548814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2472;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 201548877 . A AT 237 PASS INDEL;BAVGPOST=0.997;BRSQ=0.618;LDAF=0.0058;AVGPOST=0.9959;RSQ=0.7086;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201548900 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6050;AVGPOST=0.9940;RSQ=0.9898;ERATE=0.0005;THETA=0.0004;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 201548969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201548971 . AAATAAATT A 234 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4901;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201549032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4227;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201549101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8035;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201549103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7182;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201549127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201549196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2478;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 201549224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201549237 . GTGTTTTT G 376 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8922;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201549345 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201549352 . T TG 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8016;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201549357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0055;AVGPOST=0.9959;RSQ=0.7219;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201549447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9619;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201549510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5148;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201549605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4593;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201549648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2484;AVGPOST=0.9959;RSQ=0.9907;ERATE=0.0010;THETA=0.0006;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 201549649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201549677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.8903;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201549791 rs34861794 C CCTG 62917 PASS INDEL;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3345;AVGPOST=0.9873;RSQ=0.9780;ERATE=0.0031;THETA=0.0003;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 201549811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3356;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0003;THETA=0.0012;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 201549990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0340;AVGPOST=0.9985;RSQ=0.9833;ERATE=0.0002;THETA=0.0030;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201550044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.7083;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201550054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3373;AVGPOST=0.9949;RSQ=0.9913;ERATE=0.0006;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 201550125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3376;AVGPOST=0.9945;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 201550147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6505;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201550188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5539;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201550250 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3885;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201550340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7187;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201550371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8135;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201550547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.853;LDAF=0.0237;AVGPOST=0.9910;RSQ=0.8567;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201550599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201550618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201550643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4938;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201550844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5926;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201550865 . AG A 1600 PASS INDEL;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0308;AVGPOST=0.9934;RSQ=0.9173;ERATE=0.0008;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201550877 . GA G 496 PASS INDEL;BAVGPOST=0.983;BRSQ=0.748;LDAF=0.0336;AVGPOST=0.9914;RSQ=0.9029;ERATE=0.0014;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 201550879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9420;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201550883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.964;LDAF=0.3314;AVGPOST=0.9893;RSQ=0.9825;ERATE=0.0010;THETA=0.0006;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 201550925 . C CA 31116 PASS INDEL;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.3282;AVGPOST=0.9890;RSQ=0.9817;ERATE=0.0005;THETA=0.0007;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 201550941 rs66882382 AT A 15637 PASS INDEL;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.3260;AVGPOST=0.9860;RSQ=0.9774;ERATE=0.0005;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 201550946 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3325;AVGPOST=0.9907;RSQ=0.9845;ERATE=0.0005;THETA=0.0006;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 201550947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201550994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201551053 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6530;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201551260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1939;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 201551273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5533;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201551275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8880;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201551292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8711;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201551332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0087;AVGPOST=0.9953;RSQ=0.7898;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201551338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8169;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201551381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201551465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201551476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4974;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 201551529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3365;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 201551591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1953;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 201551598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0042;AVGPOST=0.9940;RSQ=0.4659;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201551620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6703;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201551639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201551688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201551874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4973;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 201551876 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201552028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5487;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201552055 . G GA 2041 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0280;AVGPOST=0.9957;RSQ=0.9435;ERATE=0.0005;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201552093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5581;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0006;THETA=0.0005;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 201552119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3364;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 201552252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4907;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 201552255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201552259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6959;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201552265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0458;AVGPOST=0.9945;RSQ=0.9473;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201552272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.6231;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201552290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4891;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 201552368 . TC T 670 PASS INDEL;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0118;AVGPOST=0.9959;RSQ=0.8599;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201552419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.0891;AVGPOST=0.9907;RSQ=0.9553;ERATE=0.0005;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 201552537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.436;LDAF=0.0076;AVGPOST=0.9888;RSQ=0.4470;ERATE=0.0010;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201552553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0521;AVGPOST=0.9931;RSQ=0.9449;ERATE=0.0009;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201552575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9971;RSQ=0.7919;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201552682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.931;LDAF=0.4525;AVGPOST=0.9300;RSQ=0.9060;ERATE=0.0112;THETA=0.0005;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 201552742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0108;AVGPOST=0.9978;RSQ=0.9071;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201552775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9308;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201552824 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3365;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 201552835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201552887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201552948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201552988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1834;AVGPOST=0.9963;RSQ=0.9903;ERATE=0.0005;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 201552990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9673;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201553124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9968;RSQ=0.8032;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201553179 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3351;AVGPOST=0.9946;RSQ=0.9909;ERATE=0.0006;THETA=0.0002;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 201553189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201553256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.4828;AVGPOST=0.9595;RSQ=0.9440;ERATE=0.0071;THETA=0.0010;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 201553336 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201553524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201553614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1452;AVGPOST=0.9973;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 201553647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201553689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201553804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4521;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201553912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0095;AVGPOST=0.9985;RSQ=0.9374;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201553930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4904;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 201553932 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6618;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201554181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201554297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9727;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201554330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6361;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201554407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.854;LDAF=0.4230;AVGPOST=0.8929;RSQ=0.8617;ERATE=0.0121;THETA=0.0005;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 201554484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.4380;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201554498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6922;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201554572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201554660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201554716 rs66809820 G GTT 1929 PASS INDEL;BAVGPOST=0.904;BRSQ=0.616;LDAF=0.1676;AVGPOST=0.8758;RSQ=0.6380;ERATE=0.0258;THETA=0.0007;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 201554898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201554922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8155;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201555030 . T TC 63 PASS INDEL;BAVGPOST=0.997;BRSQ=0.575;LDAF=0.0049;AVGPOST=0.9946;RSQ=0.5758;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201555059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.1269;AVGPOST=0.9850;RSQ=0.9548;ERATE=0.0006;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 201555060 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9146;ERATE=0.0011;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201555088 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0141;AVGPOST=0.9963;RSQ=0.9032;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201555174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201555190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.946;LDAF=0.0992;AVGPOST=0.9893;RSQ=0.9526;ERATE=0.0006;THETA=0.0008;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 201555365 . AAAAT A 70 PASS INDEL;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0079;AVGPOST=0.9908;RSQ=0.5012;ERATE=0.0036;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201555417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9040;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201555420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201555447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201555450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6586;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201555485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9403;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201555577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1335;AVGPOST=0.9973;RSQ=0.9907;ERATE=0.0005;THETA=0.0017;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 201555605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4512;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201555606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8545;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201556086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7261;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201556127 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201556147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1367;AVGPOST=0.9946;RSQ=0.9836;ERATE=0.0005;THETA=0.0010;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 201556188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8695;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201556198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6002;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201556334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7564;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201556350 . AC A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201556531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201556589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201556790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201556851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9821;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0013;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 201557045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7610;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201557224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201557265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201557270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8417;ERATE=0.0016;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201557305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0004;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201557396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201557543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7584;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201557626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9656;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201557720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9242;ERATE=0.0004;THETA=0.0037;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201557737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8818;ERATE=0.0004;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201557845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201557872 . A AT 119 PASS INDEL;BAVGPOST=0.990;BRSQ=0.499;LDAF=0.0139;AVGPOST=0.9832;RSQ=0.5129;ERATE=0.0029;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201558140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9457;ERATE=0.0004;THETA=0.0032;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201558152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201558216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201558254 . GTATA G 292 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9209;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201558267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201558496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201558738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201558813 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.9835;AVGPOST=0.9975;RSQ=0.9373;ERATE=0.0003;THETA=0.0031;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 201558875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0118;AVGPOST=0.9986;RSQ=0.9514;ERATE=0.0004;THETA=0.0021;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201558877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7877;ERATE=0.0012;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201558946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8637;ERATE=0.0013;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201559061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0079;AVGPOST=0.9993;RSQ=0.9609;ERATE=0.0003;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201559179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9545;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201559226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5801;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201559380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201559484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201559498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2511;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 201559544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201559567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0783;AVGPOST=0.9985;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 201559606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201559693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0201;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201559793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7935;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201559861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0251;AVGPOST=0.9990;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201559963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0541;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0009;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 201560053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201560074 . A AG 2493 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9993;RSQ=0.9841;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201560076 rs112148361 A AT 31050 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2540;AVGPOST=0.9889;RSQ=0.9785;ERATE=0.0018;THETA=0.0008;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 201560237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2501;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0008;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 201560333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9491;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201560415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201560539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1985;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 201560650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0168;AVGPOST=0.9991;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201560688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201560694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201560706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1739;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0004;THETA=0.0012;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 201560744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201560758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2931;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 201560790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201560996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201560999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7164;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201561113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2930;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 201561118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4869;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201561125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1198;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0032;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 201561245 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201561263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561275 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3186;AVGPOST=0.9955;RSQ=0.9920;ERATE=0.0004;THETA=0.0037;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 201561631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0164;AVGPOST=0.9973;RSQ=0.9401;ERATE=0.0005;THETA=0.0014;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201561673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1186;AVGPOST=0.9972;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 201561676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.0896;ERATE=0.0003;THETA=0.0010;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 201561739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.9984;AVGPOST=0.9985;RSQ=0.5740;ERATE=0.0005;THETA=0.0048;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 201561806 . G GC 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7074;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201561914 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201561916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6171;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201561951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3007;AVGPOST=0.9870;RSQ=0.9772;ERATE=0.0007;THETA=0.0087;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 201562001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0210;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201562143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6725;ERATE=0.0004;THETA=0.0086;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201562398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201562614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0262;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201562739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.913;LDAF=0.0813;AVGPOST=0.9872;RSQ=0.9363;ERATE=0.0003;THETA=0.0114;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 201562766 . C CT 242 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0052;AVGPOST=0.9952;RSQ=0.6392;ERATE=0.0006;THETA=0.0051;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201562787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7848;ERATE=0.0005;THETA=0.0170;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201562831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6100;ERATE=0.0003;THETA=0.0152;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201562910 . TAAG T 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6996;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201563056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0134;AVGPOST=0.9975;RSQ=0.9343;ERATE=0.0005;THETA=0.0028;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201563120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.950;LDAF=0.1919;AVGPOST=0.9823;RSQ=0.9592;ERATE=0.0008;THETA=0.0026;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 201563146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.759;LDAF=0.1734;AVGPOST=0.9511;RSQ=0.8826;ERATE=0.0036;THETA=0.0098;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 201563184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0174;AVGPOST=0.9928;RSQ=0.8404;ERATE=0.0006;THETA=0.0122;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201563286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5008;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201563306 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.959;LDAF=0.1346;AVGPOST=0.9920;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 201563364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7671;ERATE=0.0005;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201563383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6087;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201563392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1593;AVGPOST=0.9956;RSQ=0.9886;ERATE=0.0004;THETA=0.0027;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 201563463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201563577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201563597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201563617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201563722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201563850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9837;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201563912 . GA G 2021 PASS INDEL;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0004;THETA=0.0026;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201563963 . C CG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6142;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201564276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201564278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201564333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201564413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201564418 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201564483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6661;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201564756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201564841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9360;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201564867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201564996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.9470;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 201565207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9493;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201565402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201565436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201565470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201565576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201565604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0493;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201565618 rs71069695 TA T 20042 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2126;AVGPOST=0.9975;RSQ=0.9938;ERATE=0.0008;THETA=0.0007;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 201565645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0493;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201565652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0142;AVGPOST=0.9987;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201565745 . TC T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6809;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201565931 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201566212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566260 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201566319 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201566637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8534;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201566705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0598;AVGPOST=0.9834;RSQ=0.8986;ERATE=0.0055;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201566706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2107;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 201566743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201566877 . GTTT G 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201566886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201566946 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201566964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.573;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7536;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201567177 . CCAT C 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5072;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201567412 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201567518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5033;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201567541 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201567566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201567586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201567610 . TTGTC T 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201567654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9103;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201567664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201567703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6850;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201567751 rs3833901 GAT G 22974 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2117;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 201567757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6925;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201567868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5000;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 201567893 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5816;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201567904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8503;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201568076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2130;AVGPOST=0.9985;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 201568113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201568243 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2130;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 201568281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201568319 . T TA 9593 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0716;AVGPOST=0.9982;RSQ=0.9888;ERATE=0.0005;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 201568373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4917;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201568570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.487;LDAF=0.0117;AVGPOST=0.9889;RSQ=0.6176;ERATE=0.0010;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201568749 . G GA 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7239;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201568759 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4889;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201568807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.6742;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201568887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0490;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201568896 . AC A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4061;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5234;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4738;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201569186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201569272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9259;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201569331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0112;AVGPOST=0.9960;RSQ=0.8508;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201569398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2921;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 201569544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201569558 . TA T 8 PASS INDEL;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7671;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201569993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7417;ERATE=0.0007;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201570066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7520;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201570090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.8985;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201570112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0060;AVGPOST=0.9946;RSQ=0.6357;ERATE=0.0011;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201570114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570194 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201570221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8152;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201570573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1240;AVGPOST=0.9951;RSQ=0.9820;ERATE=0.0010;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 201570581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8307;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201570657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.852;LDAF=0.0350;AVGPOST=0.9913;RSQ=0.8989;ERATE=0.0023;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201570676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7641;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201570752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1129;AVGPOST=0.9977;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 201570772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201570782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1230;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 201570803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4716;AVGPOST=0.9891;RSQ=0.9817;ERATE=0.0024;THETA=0.0002;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 201570908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7765;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201571010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1226;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 201571078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5960;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201571079 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201571107 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0317;AVGPOST=0.9971;RSQ=0.9630;ERATE=0.0004;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 201571176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201571209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201571338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7559;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201571342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6055;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0009;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 201571397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6655;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201571515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201571522 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9255;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201571744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0080;AVGPOST=0.9952;RSQ=0.8119;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201571761 . ATGCT A 461 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5931;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201571797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7276;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201571897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9774;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201571950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6065;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 201572115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6714;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201572173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8920;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201572194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1238;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201572195 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201572346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5943;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201572565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0107;AVGPOST=0.9973;RSQ=0.9043;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201572898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6730;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 201572989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201573440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1235;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0005;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201573463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201573671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201573796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8843;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201573856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0040;AVGPOST=0.9962;RSQ=0.6466;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201573938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2435;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 201574008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5692;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201574103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5580;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574214 . C CT 13 PASS INDEL;BAVGPOST=0.989;BRSQ=0.457;LDAF=0.0171;AVGPOST=0.9784;RSQ=0.4926;ERATE=0.0055;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201574219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.453;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3830;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6058;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 201574484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201574739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201574832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201574846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7044;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201574905 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.5978;AVGPOST=0.9865;RSQ=0.9769;ERATE=0.0035;THETA=0.0021;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 201574938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4363;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201575000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1254;AVGPOST=0.9969;RSQ=0.9885;ERATE=0.0005;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 201575207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7509;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201575288 . CTAAG C 522 PASS INDEL;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8735;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201575681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7014;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201575682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5032;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201575786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6908;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201575872 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201575907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201576176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5260;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201576201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201576340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0088;AVGPOST=0.9974;RSQ=0.8770;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201576425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5602;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201576493 . T TA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6589;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201576562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201576667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201576813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201576815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201576857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3266;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 201577011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201577079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201577110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201577333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201577357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5515;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201577369 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5229;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201577403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6810;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201577551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8450;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201577559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201577594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3141;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0005;THETA=0.0007;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 201577602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8756;ERATE=0.0005;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201577621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0263;AVGPOST=0.9976;RSQ=0.9553;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201577665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6188;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201577718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5520;ERATE=0.0004;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201577766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.917;LDAF=0.0774;AVGPOST=0.9974;RSQ=0.9860;ERATE=0.0004;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 201577807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7373;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201577929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8150;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201578011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9613;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201578066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3763;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 201578070 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5956;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201578108 . ATTC A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6858;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201578135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201578324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3598;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 201578363 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201578492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5009;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201578637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1302;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0004;THETA=0.0010;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 201579090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9493;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201579124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9232;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201579177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201579430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579432 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0563;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 201579499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201579576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201579583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201579658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9432;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201579668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0001;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201579730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579758 . G GT 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6062;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201579850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9738;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201579857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201579898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9809;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201579950 . TAGAG T 575 PASS INDEL;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0058;AVGPOST=0.9980;RSQ=0.8886;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201579983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.3844;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201581149 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0188;AVGPOST=0.9978;RSQ=0.9531;ERATE=0.0005;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201581438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.7844;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201581442 . T TA 178 PASS INDEL;BAVGPOST=0.846;BRSQ=0.413;LDAF=0.1578;AVGPOST=0.8858;RSQ=0.6870;ERATE=0.0019;THETA=0.0009;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 201581620 rs57177048 A AT 999 PASS INDEL;BAVGPOST=0.905;BRSQ=0.682;LDAF=0.1679;AVGPOST=0.9333;RSQ=0.8200;ERATE=0.0018;THETA=0.0009;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 201581637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2579;AVGPOST=0.9925;RSQ=0.9837;ERATE=0.0006;THETA=0.0002;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 201581684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5101;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201581725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.648;LDAF=0.0075;AVGPOST=0.9959;RSQ=0.7560;ERATE=0.0006;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201581802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.889;LDAF=0.2980;AVGPOST=0.9670;RSQ=0.9414;ERATE=0.0037;THETA=0.0005;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 201581929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0090;AVGPOST=0.9956;RSQ=0.7947;ERATE=0.0006;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201581949 . AC A 17394 PASS INDEL;BAVGPOST=0.998;BRSQ=0.430;LDAF=0.9902;AVGPOST=0.9872;RSQ=0.4933;ERATE=0.0016;THETA=0.0006;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 201581949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6626;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201582040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9541;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201582052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201582096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201582185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8410;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201582221 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.689;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.6956;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201582281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3233;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0005;THETA=0.0022;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 201582367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201582370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7893;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201582499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8968;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201582609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3247;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 201582729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8597;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201582817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6636;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201583073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9079;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201583264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7776;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201583281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201583282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201583493 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201583494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8102;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201583544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6708;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201583550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1739;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 201583569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3256;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 201583594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8615;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201583643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201583707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8452;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201583728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201583785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9722;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201583786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201583882 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201583922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201583966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0807;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 201584016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3240;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 201584105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5459;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201584413 . GACAC G 11380 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0487;AVGPOST=0.9990;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201584422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6572;ERATE=0.0011;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201584483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201584504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7328;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201584599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.834;LDAF=0.0444;AVGPOST=0.9871;RSQ=0.8840;ERATE=0.0006;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 201584618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6039;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201584729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0242;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0021;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201584744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.6880;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201584748 . A AT 183 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8331;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201584779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3251;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 201584818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7412;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201584833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201584842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201584887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.7023;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201584948 . TC T 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.5248;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201584953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0242;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201584955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201585018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201585214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8711;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201585298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6827;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201585300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201585308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201585339 rs35389669 TC T 14115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0804;AVGPOST=0.9975;RSQ=0.9861;ERATE=0.0005;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201585514 . CA C 335 PASS INDEL;BAVGPOST=0.968;BRSQ=0.815;LDAF=0.1057;AVGPOST=0.9447;RSQ=0.7831;ERATE=0.0012;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 201585516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2076;AVGPOST=0.9977;RSQ=0.9939;ERATE=0.0005;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 201585627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201585797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4551;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201585892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.617;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7036;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201585901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8849;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201585911 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2085;AVGPOST=0.9972;RSQ=0.9926;ERATE=0.0005;THETA=0.0009;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 201585916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.939;LDAF=0.0368;AVGPOST=0.9978;RSQ=0.9764;ERATE=0.0005;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 201586068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2806;AVGPOST=0.9887;RSQ=0.9791;ERATE=0.0026;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 201586069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9020;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201586084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7902;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201586203 . G GT 13 PASS INDEL;BAVGPOST=0.996;BRSQ=0.517;LDAF=0.0141;AVGPOST=0.9819;RSQ=0.4889;ERATE=0.0028;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201586272 . T TG 348 PASS INDEL;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0101;AVGPOST=0.9939;RSQ=0.7569;ERATE=0.0009;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201586283 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0091;AVGPOST=0.9926;RSQ=0.6873;ERATE=0.0020;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201586284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9968;RSQ=0.3321;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201586306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1690;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0006;THETA=0.0030;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 201586361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201586878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201586920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2752;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 201587260 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201587651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7444;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201587680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4919;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201587777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7884;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201588014 rs55893498 A AG 80102 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6614;AVGPOST=0.9923;RSQ=0.9885;ERATE=0.0007;THETA=0.0004;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 201588049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1675;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 201588204 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5320;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201588372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201588475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.675;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6508;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201588687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201588742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0030;AVGPOST=0.9958;RSQ=0.4656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201588804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4233;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201588912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201588962 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7021;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201589007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201589024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201589035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8593;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201589197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.831;LDAF=0.0085;AVGPOST=0.9967;RSQ=0.8463;ERATE=0.0008;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201589205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4727;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201589314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201589490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201589508 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201589581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201589704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201589760 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201589802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201589809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9436;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201589856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201589952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6144;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201590004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201590184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9474;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201590188 . A AT 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7347;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201590309 . CA C 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0032;AVGPOST=0.9950;RSQ=0.3800;ERATE=0.0010;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201590330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5696;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201590530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7241;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201590541 . AT A 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3765;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201590579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201590652 rs113029410 TTA T 15296 PASS INDEL;BAVGPOST=0.974;BRSQ=0.924;LDAF=0.1657;AVGPOST=0.9835;RSQ=0.9618;ERATE=0.0005;THETA=0.0006;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 201590662 rs113029410 A AT 61 PASS INDEL;BAVGPOST=0.960;BRSQ=0.407;LDAF=0.0644;AVGPOST=0.9170;RSQ=0.4680;ERATE=0.0093;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201590664 rs11361979 TA T 7268 PASS INDEL;BAVGPOST=0.863;BRSQ=0.668;LDAF=0.2384;AVGPOST=0.8559;RSQ=0.6978;ERATE=0.0231;THETA=0.0016;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 201590667 . TTA T 18877 PASS INDEL;BAVGPOST=0.880;BRSQ=0.811;LDAF=0.5112;AVGPOST=0.9374;RSQ=0.9139;ERATE=0.0015;THETA=0.0005;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 201590670 rs11346694 TA T 19349 PASS INDEL;BAVGPOST=0.899;BRSQ=0.844;LDAF=0.5132;AVGPOST=0.9489;RSQ=0.9296;ERATE=0.0008;THETA=0.0010;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 201590671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4001;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201590735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.4477;AVGPOST=0.9647;RSQ=0.9521;ERATE=0.0059;THETA=0.0028;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 201591015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5394;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201591040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4625;AVGPOST=0.9949;RSQ=0.9936;ERATE=0.0006;THETA=0.0006;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 201591088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.821;LDAF=0.0298;AVGPOST=0.9917;RSQ=0.8880;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201591144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9380;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201591153 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0473;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201591371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201591436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6229;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201591550 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201591605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201591917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201592084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9984;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201592305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201592444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201592445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9566;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201592531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201592601 . C CT 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201592713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0028;AVGPOST=0.9953;RSQ=0.3576;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201592806 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0010;AVGPOST=0.9981;RSQ=0.2952;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201592819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.497;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.5983;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201592832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5875;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201592865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0034;AVGPOST=0.9964;RSQ=0.5503;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201592910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9638;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201592918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6654;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201593007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6873;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201593008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201593047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9816;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201593187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201593214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0464;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0004;THETA=0.0008;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201593399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8922;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201593403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8837;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201593506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0070;AVGPOST=0.9972;RSQ=0.8356;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201593590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201593780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5978;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201593805 . AT A 251 PASS INDEL;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0079;AVGPOST=0.9954;RSQ=0.7644;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201593835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0146;AVGPOST=0.9976;RSQ=0.9340;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201593876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201593888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201593910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201593981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9082;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201594057 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201594151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3495;ERATE=0.0002;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201594202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6825;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201594243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201594301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201594378 . GTAGTTTTAGCTGCCTAT G 3748 PASS INDEL;BAVGPOST=0.992;BRSQ=0.815;LDAF=0.0220;AVGPOST=0.9979;RSQ=0.9588;ERATE=0.0005;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201594467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201594515 . AC A 381 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8744;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201594520 . GTC G 107 PASS INDEL;BAVGPOST=0.975;BRSQ=0.443;LDAF=0.0783;AVGPOST=0.8904;RSQ=0.4039;ERATE=0.0106;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201594610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201594811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4988;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201594873 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8946;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201594901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0427;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0002;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 201595214 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201595349 . A AT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5748;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201595400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2266;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 201595407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201595498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0297;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201595532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201595538 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201595621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201595666 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201595951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201595992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7905;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201596031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201596162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9954;AVGPOST=0.9945;RSQ=0.5845;ERATE=0.0005;THETA=0.0006;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 201596260 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3992;AVGPOST=0.9853;RSQ=0.9775;ERATE=0.0026;THETA=0.0004;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 201596266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0464;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201596297 . C CA 330 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9088;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201596525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5367;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201596605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201596826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201596873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9988;RSQ=0.9768;ERATE=0.0003;THETA=0.0025;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201597031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5971;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201597056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201597096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.908;LDAF=0.0776;AVGPOST=0.9899;RSQ=0.9468;ERATE=0.0004;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 201597143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201597388 . A AT 1028 PASS INDEL;BAVGPOST=0.812;BRSQ=0.705;LDAF=0.3016;AVGPOST=0.8524;RSQ=0.7739;ERATE=0.0012;THETA=0.0008;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 201597445 . A AG 947 PASS INDEL;BAVGPOST=0.812;BRSQ=0.701;LDAF=0.2912;AVGPOST=0.8533;RSQ=0.7707;ERATE=0.0007;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 201597449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0022;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201597629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201597661 . A AT 1810 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9765;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201597732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.851;LDAF=0.0201;AVGPOST=0.9939;RSQ=0.8777;ERATE=0.0006;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201597803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0296;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201597817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201597857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2840;AVGPOST=0.9969;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 201597867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201597904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8669;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201597915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201597943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5774;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201597968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0304;AVGPOST=0.9993;RSQ=0.9898;ERATE=0.0003;THETA=0.0024;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201597981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201597998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7350;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201598243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0473;AVGPOST=0.9962;RSQ=0.9684;ERATE=0.0004;THETA=0.0032;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201598293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201598364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3588;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201598963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201599041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9252;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201599187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1161;AVGPOST=0.9946;RSQ=0.9778;ERATE=0.0003;THETA=0.0006;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201599197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9970;AVGPOST=0.9985;RSQ=0.7825;ERATE=0.0004;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 201599202 rs56242555 TA T 1713 PASS INDEL;BAVGPOST=0.990;BRSQ=0.888;LDAF=0.0430;AVGPOST=0.9775;RSQ=0.8048;ERATE=0.0045;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201599225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4921;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201599231 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.849;LDAF=0.0106;AVGPOST=0.9963;RSQ=0.8583;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201599232 . AT A 4148 PASS INDEL;BAVGPOST=0.953;BRSQ=0.737;LDAF=0.0933;AVGPOST=0.9550;RSQ=0.8140;ERATE=0.0047;THETA=0.0009;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 201599242 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.952;LDAF=0.1538;AVGPOST=0.9895;RSQ=0.9675;ERATE=0.0008;THETA=0.0005;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 201599243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0073;AVGPOST=0.9969;RSQ=0.8373;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201599338 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.9086;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201599357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0128;AVGPOST=0.9958;RSQ=0.8955;ERATE=0.0004;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201599464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0131;AVGPOST=0.9952;RSQ=0.8829;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201599465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0132;AVGPOST=0.9950;RSQ=0.8786;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201599467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0126;AVGPOST=0.9963;RSQ=0.9086;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201599469 . ACT A 931 PASS INDEL;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0135;AVGPOST=0.9950;RSQ=0.8769;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201599472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6448;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201599607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9139;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201599649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.9941;AVGPOST=0.9956;RSQ=0.7087;ERATE=0.0006;THETA=0.0006;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 201599950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201599953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8047;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201600135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4866;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201600219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201600236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0301;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201600256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201600291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201600367 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201600463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9033;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201600502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201600523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201600652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8805;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201600713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201600765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201600963 . AGACAC A 797 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201601147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9466;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201601154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201601180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.4781;AVGPOST=0.9900;RSQ=0.9855;ERATE=0.0011;THETA=0.0010;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 201601186 . T TAAAGTG 118215 PASS INDEL;BAVGPOST=0.969;BRSQ=0.891;LDAF=0.8190;AVGPOST=0.9263;RSQ=0.8099;ERATE=0.0180;THETA=0.0004;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 201601249 . T TAA 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5537;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201601366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201601451 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5355;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201601507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3561;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201601619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.914;LDAF=0.4070;AVGPOST=0.9527;RSQ=0.9267;ERATE=0.0037;THETA=0.0002;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 201601675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.865;LDAF=0.7587;AVGPOST=0.9261;RSQ=0.8534;ERATE=0.0053;THETA=0.0002;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 201601680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.904;LDAF=0.0210;AVGPOST=0.9980;RSQ=0.9591;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201601720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0004;THETA=0.0001;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201602116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.5971;AVGPOST=0.9920;RSQ=0.9871;ERATE=0.0010;THETA=0.0012;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 201602153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201602249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602595 . T TA 272 PASS INDEL;BAVGPOST=0.997;BRSQ=0.688;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.6684;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201602627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201602700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0580;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 201602720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201602722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201602785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201602827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9820;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201602844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201602985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201602988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201603044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201603127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201603137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201603141 rs112709894 C CCTT 5515 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0217;AVGPOST=0.9986;RSQ=0.9781;ERATE=0.0003;THETA=0.0029;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 201603241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201603375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201603490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8264;ERATE=0.0003;THETA=0.0052;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201603567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3909;AVGPOST=0.9924;RSQ=0.9880;ERATE=0.0004;THETA=0.0238;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 201603574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0092;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201603602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0142;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201603918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0327;AVGPOST=0.9971;RSQ=0.9671;ERATE=0.0012;THETA=0.0143;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201603938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.939;LDAF=0.5690;AVGPOST=0.9557;RSQ=0.9358;ERATE=0.0077;THETA=0.0111;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 201604017 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.6416;ERATE=0.0003;THETA=0.0179;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201604065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9751;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201604111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.910;LDAF=0.1919;AVGPOST=0.9528;RSQ=0.8953;ERATE=0.0062;THETA=0.0266;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 201604141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0340;AVGPOST=0.9953;RSQ=0.9513;ERATE=0.0003;THETA=0.0074;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201604160 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0108;AVGPOST=0.9970;RSQ=0.8848;ERATE=0.0004;THETA=0.0142;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201604220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.896;LDAF=0.2859;AVGPOST=0.9360;RSQ=0.8841;ERATE=0.0241;THETA=0.0151;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 201604243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0641;AVGPOST=0.9942;RSQ=0.9639;ERATE=0.0007;THETA=0.0059;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 201604300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0156;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201604311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9368;ERATE=0.0003;THETA=0.0108;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201604411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0161;AVGPOST=0.9976;RSQ=0.9368;ERATE=0.0034;THETA=0.0040;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201604424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9710;ERATE=0.0003;THETA=0.0197;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201604450 . C CT 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4723;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201604583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201604659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.9565;AVGPOST=0.9984;RSQ=0.9868;ERATE=0.0003;THETA=0.0012;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 201604756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201604922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201604986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201605055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.457;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0089;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201605068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.0683;AVGPOST=0.9857;RSQ=0.9123;ERATE=0.0015;THETA=0.0068;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 201605069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.930;LDAF=0.0591;AVGPOST=0.9900;RSQ=0.9380;ERATE=0.0004;THETA=0.0073;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 201605110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.979;LDAF=0.5242;AVGPOST=0.9769;RSQ=0.9679;ERATE=0.0007;THETA=0.0053;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 201605119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.940;LDAF=0.0630;AVGPOST=0.9941;RSQ=0.9626;ERATE=0.0005;THETA=0.0009;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201605120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9065;ERATE=0.0005;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201605190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0226;AVGPOST=0.9966;RSQ=0.9435;ERATE=0.0006;THETA=0.0021;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201605248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.9537;AVGPOST=0.9956;RSQ=0.9637;ERATE=0.0006;THETA=0.0006;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 201605373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201605561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8934;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201605616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201605626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1198;AVGPOST=0.9969;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 201605706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201605824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201605960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8953;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201606024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9747;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201606208 . AAAAG A 3149 PASS INDEL;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0404;AVGPOST=0.9914;RSQ=0.9136;ERATE=0.0006;THETA=0.0014;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 201606292 . AAAGG A 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4545;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201606317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9292;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201606321 . GA G 150 PASS INDEL;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7144;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201606396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5714;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201606423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201606586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9845;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 201606628 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7371;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201606699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201606765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201606777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201606806 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201606932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9548;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201607028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201607069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1120;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 201607102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201607110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201607172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9227;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201607174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0002;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 201607241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8820;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201607267 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6573;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201607270 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201607319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0365;AVGPOST=0.9988;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 201607343 . CAAT C 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6040;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201607383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4160;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201607759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201607854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201608042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201608313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201608419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8379;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201608422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201608423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0966;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0003;THETA=0.0012;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 201608580 . T TA 1143 PASS INDEL;BAVGPOST=0.991;BRSQ=0.850;LDAF=0.0307;AVGPOST=0.9855;RSQ=0.8142;ERATE=0.0024;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201608806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1129;AVGPOST=0.9981;RSQ=0.9916;ERATE=0.0004;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 201608816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201608863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201608885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8223;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201609151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8584;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201609179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201609192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5332;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201609314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201609324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201609381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201609434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.872;LDAF=0.0955;AVGPOST=0.9883;RSQ=0.9468;ERATE=0.0010;THETA=0.0008;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 201609480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201609551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1003;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 201609819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9830;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0006;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 201609980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9292;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201609981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201610025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201610179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6576;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201610247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.8186;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201610299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5574;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201610345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201610352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201610366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5788;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201610556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4274;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201610775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201610797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0002;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201610802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201610822 . AG A 639 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9209;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201610984 . TAAAATAA T 245 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6190;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201611073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201611120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7782;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201611139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201611263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9827;AVGPOST=0.9993;RSQ=0.9815;ERATE=0.0003;THETA=0.0007;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 201611293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201611425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8943;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201611624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0130;AVGPOST=0.9991;RSQ=0.9758;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201611728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8140;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201611768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2264;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 201611807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0652;AVGPOST=0.9965;RSQ=0.9756;ERATE=0.0006;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 201612023 . CA C 53 PASS INDEL;BAVGPOST=0.982;BRSQ=0.369;LDAF=0.0238;AVGPOST=0.9657;RSQ=0.4403;ERATE=0.0070;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201612067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8021;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201612138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201612149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9318;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201612167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201612179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4710;AVGPOST=0.9983;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 201612262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8889;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201612277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7103;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201612289 . AAAAG A 10132 PASS INDEL;BAVGPOST=0.957;BRSQ=0.884;LDAF=0.2210;AVGPOST=0.9335;RSQ=0.8600;ERATE=0.0144;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 201612368 rs34485851 AAAG A 17355 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2412;AVGPOST=0.9869;RSQ=0.9778;ERATE=0.0009;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 201612369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2294;AVGPOST=0.9963;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 201612408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8077;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201612535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201612610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201612650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8048;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201612809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201612827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5856;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201612861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3770;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201612882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201612927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7468;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201612967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201612969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201613097 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201613151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201613185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201613213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8763;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201613230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201613248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5381;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201613251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7604;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201613265 . CAG C 431 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8893;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201613399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201613566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201613578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7690;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201613584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1420;AVGPOST=0.9959;RSQ=0.9876;ERATE=0.0004;THETA=0.0010;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 201613691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.2949;AVGPOST=0.9931;RSQ=0.9878;ERATE=0.0007;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 201613768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.812;LDAF=0.0423;AVGPOST=0.9575;RSQ=0.6028;ERATE=0.0024;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201613941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4579;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201613993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7178;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201614012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5534;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201614019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201614175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0140;AVGPOST=0.9977;RSQ=0.9322;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201614258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1607;AVGPOST=0.9928;RSQ=0.9793;ERATE=0.0009;THETA=0.0010;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 201614535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6943;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201614582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201614624 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5869;AVGPOST=0.9840;RSQ=0.9782;ERATE=0.0021;THETA=0.0009;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 201614644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201614712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.950;LDAF=0.2904;AVGPOST=0.9881;RSQ=0.9786;ERATE=0.0017;THETA=0.0007;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 201614854 rs34557645 C CATTT 25411 PASS INDEL;BAVGPOST=0.969;BRSQ=0.934;LDAF=0.2854;AVGPOST=0.9807;RSQ=0.9677;ERATE=0.0008;THETA=0.0010;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 201615014 . A AT 2008 PASS INDEL;BAVGPOST=0.882;BRSQ=0.702;LDAF=0.2741;AVGPOST=0.8183;RSQ=0.6480;ERATE=0.0174;THETA=0.0008;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 201615045 . T TA 1164 PASS INDEL;BAVGPOST=0.931;BRSQ=0.692;LDAF=0.1397;AVGPOST=0.8926;RSQ=0.6618;ERATE=0.0100;THETA=0.0017;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 201615048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.806;LDAF=0.1520;AVGPOST=0.9270;RSQ=0.7902;ERATE=0.0086;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 201615049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.754;LDAF=0.1906;AVGPOST=0.9285;RSQ=0.8263;ERATE=0.0031;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 201615097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.761;LDAF=0.0723;AVGPOST=0.9690;RSQ=0.8291;ERATE=0.0012;THETA=0.0009;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 201615174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.564;LDAF=0.1209;AVGPOST=0.9393;RSQ=0.7997;ERATE=0.0030;THETA=0.0007;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 201615198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0210;AVGPOST=0.9927;RSQ=0.8631;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201615337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.743;LDAF=0.0306;AVGPOST=0.9919;RSQ=0.8994;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201615340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0099;AVGPOST=0.9971;RSQ=0.8685;ERATE=0.0004;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201615343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7378;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201615565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6843;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201615772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4108;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201615844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5831;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201616180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.802;LDAF=0.3940;AVGPOST=0.8789;RSQ=0.8382;ERATE=0.0112;THETA=0.0004;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 201616292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.588;LDAF=0.0281;AVGPOST=0.9771;RSQ=0.6702;ERATE=0.0033;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201616452 . A AT 351 PASS INDEL;BAVGPOST=0.465;BRSQ=0.003;LDAF=0.1806;AVGPOST=0.7241;RSQ=0.2143;ERATE=0.0121;THETA=0.0028;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201616817 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0102;AVGPOST=0.9970;RSQ=0.8811;ERATE=0.0006;THETA=0.0029;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201617170 . C CT 16100 PASS INDEL;BAVGPOST=0.818;BRSQ=0.676;LDAF=0.5472;AVGPOST=0.7915;RSQ=0.6569;ERATE=0.0317;THETA=0.0040;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 201617660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.614;LDAF=0.0111;AVGPOST=0.9886;RSQ=0.5723;ERATE=0.0028;THETA=0.0038;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201618102 . TG T 223 PASS INDEL;BAVGPOST=0.994;BRSQ=0.370;LDAF=0.0064;AVGPOST=0.9908;RSQ=0.4189;ERATE=0.0008;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201619339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0278;AVGPOST=0.9963;RSQ=0.9462;ERATE=0.0005;THETA=0.0018;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 201620344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0432;AVGPOST=0.9972;RSQ=0.9753;ERATE=0.0005;THETA=0.0059;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201620827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7954;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201621677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.773;BRSQ=0.710;LDAF=0.5471;AVGPOST=0.8185;RSQ=0.7858;ERATE=0.0090;THETA=0.0032;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 201621906 . CAATAT C 761 PASS INDEL;BAVGPOST=0.954;BRSQ=0.586;LDAF=0.0535;AVGPOST=0.9622;RSQ=0.7295;ERATE=0.0011;THETA=0.0020;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201622292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.781;LDAF=0.0151;AVGPOST=0.9956;RSQ=0.8831;ERATE=0.0004;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201622532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4216;ERATE=0.0005;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201622771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.600;LDAF=0.0122;AVGPOST=0.9899;RSQ=0.6673;ERATE=0.0018;THETA=0.0048;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201622789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.831;LDAF=0.0281;AVGPOST=0.9854;RSQ=0.7931;ERATE=0.0021;THETA=0.0098;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201622798 rs72418317 AAG A 46 PASS INDEL;BAVGPOST=0.993;BRSQ=0.564;LDAF=0.0087;AVGPOST=0.9902;RSQ=0.5517;ERATE=0.0020;THETA=0.0027;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201622804 . AGG A 134 PASS INDEL;BAVGPOST=0.997;BRSQ=0.524;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5141;ERATE=0.0008;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201625768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201628807 . T TA 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5695;ERATE=0.0004;THETA=0.0060;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201628953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.696;LDAF=0.0249;AVGPOST=0.9817;RSQ=0.7148;ERATE=0.0027;THETA=0.0037;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201628978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.749;LDAF=0.0236;AVGPOST=0.9867;RSQ=0.7789;ERATE=0.0019;THETA=0.0062;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201628981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7370;ERATE=0.0006;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201629771 . G GTA 22567 PASS INDEL;BAVGPOST=0.911;BRSQ=0.688;LDAF=0.2395;AVGPOST=0.8696;RSQ=0.6591;ERATE=0.0038;THETA=0.0061;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 201630185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.536;LDAF=0.0775;AVGPOST=0.9222;RSQ=0.5303;ERATE=0.0182;THETA=0.0159;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 201632559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.340;LDAF=0.0132;AVGPOST=0.9799;RSQ=0.3611;ERATE=0.0024;THETA=0.0225;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201632564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.866;BRSQ=0.509;LDAF=0.1449;AVGPOST=0.8436;RSQ=0.5153;ERATE=0.0014;THETA=0.0109;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201632916 . CA C 9 PASS INDEL;BAVGPOST=0.726;BRSQ=0.003;LDAF=0.1230;AVGPOST=0.7822;RSQ=0.1229;ERATE=0.0039;THETA=0.0281;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201633327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.4988;ERATE=0.0005;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201637927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.400;LDAF=0.0367;AVGPOST=0.9446;RSQ=0.3680;ERATE=0.0028;THETA=0.0177;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201638139 . GT G 87 PASS INDEL;BAVGPOST=0.986;BRSQ=0.382;LDAF=0.0255;AVGPOST=0.9620;RSQ=0.4066;ERATE=0.0017;THETA=0.0114;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201639001 . TG T 299 PASS INDEL;BAVGPOST=0.918;BRSQ=0.214;LDAF=0.0734;AVGPOST=0.8952;RSQ=0.4016;ERATE=0.0036;THETA=0.0055;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201639029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.268;LDAF=0.0914;AVGPOST=0.8794;RSQ=0.4235;ERATE=0.0074;THETA=0.0141;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201639030 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.772;BRSQ=0.277;LDAF=0.2303;AVGPOST=0.7509;RSQ=0.3633;ERATE=0.0259;THETA=0.0116;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 201639205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.744;BRSQ=0.277;LDAF=0.2115;AVGPOST=0.7384;RSQ=0.3781;ERATE=0.0123;THETA=0.0121;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 201639300 . GGGGA G 370 PASS INDEL;BAVGPOST=0.916;BRSQ=0.105;LDAF=0.0722;AVGPOST=0.8827;RSQ=0.2679;ERATE=0.0022;THETA=0.0168;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201665652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.219;LDAF=0.1416;AVGPOST=0.7986;RSQ=0.3291;ERATE=0.0145;THETA=0.0191;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201665670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.247;LDAF=0.0891;AVGPOST=0.8665;RSQ=0.3127;ERATE=0.0091;THETA=0.0142;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201665676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.392;LDAF=0.1278;AVGPOST=0.8733;RSQ=0.5924;ERATE=0.0025;THETA=0.0066;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 201665691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.400;LDAF=0.0220;AVGPOST=0.9708;RSQ=0.4606;ERATE=0.0036;THETA=0.0085;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201665701 . T TA 761 PASS INDEL;BAVGPOST=0.888;BRSQ=0.344;LDAF=0.1010;AVGPOST=0.8845;RSQ=0.5400;ERATE=0.0040;THETA=0.0082;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 201665729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.188;LDAF=0.0208;AVGPOST=0.9694;RSQ=0.3850;ERATE=0.0022;THETA=0.0194;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201665825 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.690;LDAF=0.5788;AVGPOST=0.8270;RSQ=0.7786;ERATE=0.0012;THETA=0.0006;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 201665868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.689;LDAF=0.5793;AVGPOST=0.8245;RSQ=0.7754;ERATE=0.0021;THETA=0.0022;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 201665870 . A ACC 8369 PASS INDEL;BAVGPOST=0.761;BRSQ=0.672;LDAF=0.5612;AVGPOST=0.8085;RSQ=0.7462;ERATE=0.0019;THETA=0.0183;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 201665870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.608;LDAF=0.0090;AVGPOST=0.9916;RSQ=0.5798;ERATE=0.0009;THETA=0.0100;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201665890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.606;LDAF=0.0090;AVGPOST=0.9914;RSQ=0.5860;ERATE=0.0008;THETA=0.0050;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201665893 . C CAT 879 PASS INDEL;BAVGPOST=0.742;BRSQ=0.082;LDAF=0.1925;AVGPOST=0.7215;RSQ=0.2674;ERATE=0.0088;THETA=0.0131;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 201665971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201666103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0176;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201666140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0131;AVGPOST=0.9955;RSQ=0.8562;ERATE=0.0006;THETA=0.0037;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201666143 . A ATG 127 PASS INDEL;BAVGPOST=0.951;BRSQ=0.417;LDAF=0.0204;AVGPOST=0.9740;RSQ=0.5022;ERATE=0.0007;THETA=0.0014;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201668533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.7911;ERATE=0.0005;THETA=0.0060;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201668712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0066;AVGPOST=0.9962;RSQ=0.7652;ERATE=0.0007;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201668824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.721;LDAF=0.0947;AVGPOST=0.9427;RSQ=0.7714;ERATE=0.0020;THETA=0.0020;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201669609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0005;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201669693 . CTA C 1331 PASS INDEL;BAVGPOST=0.987;BRSQ=0.606;LDAF=0.0165;AVGPOST=0.9849;RSQ=0.6461;ERATE=0.0011;THETA=0.0082;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201670402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0319;AVGPOST=0.9940;RSQ=0.9252;ERATE=0.0006;THETA=0.0037;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201670626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0450;AVGPOST=0.9936;RSQ=0.9447;ERATE=0.0006;THETA=0.0029;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201670709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.687;LDAF=0.0335;AVGPOST=0.9737;RSQ=0.6914;ERATE=0.0010;THETA=0.0075;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201670902 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.536;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7872;ERATE=0.0005;THETA=0.0038;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201670973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4004;AVGPOST=0.9958;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 201671173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6610;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201671565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201671797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6721;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201671872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0165;AVGPOST=0.9987;RSQ=0.9704;ERATE=0.0003;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201671888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7295;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201671891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0849;AVGPOST=0.9987;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 201671970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7385;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201672158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.566;LDAF=0.0117;AVGPOST=0.9918;RSQ=0.7375;ERATE=0.0007;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201672334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4279;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201672477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5720;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201672593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201672622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201672643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201672874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201672936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0540;AVGPOST=0.9974;RSQ=0.9817;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 201673003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0084;AVGPOST=0.9961;RSQ=0.8129;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201673073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201673216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201673303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201673375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7295;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201673428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9832;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201673509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4213;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201673733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3881;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201674177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3989;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0006;THETA=0.0007;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 201674237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7888;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201674300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9326;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201674372 rs10305653 A AAC 8080 PASS INDEL;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0513;AVGPOST=0.9934;RSQ=0.9455;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 201674567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5183;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201674635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0402;AVGPOST=0.9973;RSQ=0.9712;ERATE=0.0004;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201674888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5525;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201674985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5309;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201675106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0853;AVGPOST=0.9974;RSQ=0.9864;ERATE=0.0006;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201675271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6708;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201675396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.597;LDAF=0.0069;AVGPOST=0.9943;RSQ=0.7165;ERATE=0.0004;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201675415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0618;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201675567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5431;ERATE=0.0005;THETA=0.0070;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201675576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.600;LDAF=0.0326;AVGPOST=0.9861;RSQ=0.8209;ERATE=0.0006;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201675693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4275;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201675922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2580;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 201676141 . TTG T 2131 PASS INDEL;BAVGPOST=0.970;BRSQ=0.925;LDAF=0.2734;AVGPOST=0.9611;RSQ=0.9216;ERATE=0.0062;THETA=0.0011;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 201676270 rs71093218 GTA G 35841 PASS INDEL;BAVGPOST=0.975;BRSQ=0.947;LDAF=0.6536;AVGPOST=0.9128;RSQ=0.8488;ERATE=0.0143;THETA=0.0007;AC=1431;AN=2184 GT:DS:GL:BD 0.65521979 1
1 201676376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8579;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201676647 . GA G 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6607;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201676676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7817;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201676711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201676742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201676799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8417;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201676820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201676844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5542;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201677015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.3995;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201677019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8348;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201677058 . A AACT 1205 PASS INDEL;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8128;ERATE=0.0008;THETA=0.0048;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201677193 rs79257275 CT C 25231 PASS INDEL;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3314;AVGPOST=0.9846;RSQ=0.9741;ERATE=0.0021;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 201677256 . G GT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6635;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201677299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201677372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201677415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201677476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0183;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201677485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201677787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7315;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201677790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8500;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201677929 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6600;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0025;AC=1443;AN=2184 GT:DS:GL:BD 0.66071427 1
1 201678131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2640;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 201678231 . A AT 33 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5321;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201678242 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2577;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 201678480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2641;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 201678515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201678712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201678800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201678811 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6594;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=1443;AN=2184 GT:DS:GL:BD 0.66071427 1
1 201678897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201678971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201679082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.890;LDAF=0.0201;AVGPOST=0.9941;RSQ=0.8903;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201679113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9551;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201679193 . C CT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201679196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6442;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201679266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201679426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201679482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4393;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201679985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7951;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201680174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9000;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201680260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201680351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9727;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201680406 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2590;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0024;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 201680511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201680583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9244;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 201680597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.6654;AVGPOST=0.9949;RSQ=0.9905;ERATE=0.0010;THETA=0.0011;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 201680669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.6680;AVGPOST=0.9946;RSQ=0.9906;ERATE=0.0012;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 201680679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201680726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201680861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.808;LDAF=0.0105;AVGPOST=0.9964;RSQ=0.8606;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201680870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0097;AVGPOST=0.9889;RSQ=0.5363;ERATE=0.0011;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201680985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2591;AVGPOST=0.9931;RSQ=0.9849;ERATE=0.0009;THETA=0.0008;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 201681072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0742;AVGPOST=0.9921;RSQ=0.9559;ERATE=0.0008;THETA=0.0018;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 201681107 . CTTAGA C 115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8809;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201681135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0300;AVGPOST=0.9988;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201681247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201681292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201681324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5616;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0008;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 201681345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201681384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3945;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201681438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0144;AVGPOST=0.9964;RSQ=0.9089;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201681500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5622;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 201681501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5621;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 201681539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7277;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201681548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8274;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201681595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.8177;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201681663 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1663;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 201681837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201681858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8435;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201681874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0277;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201681875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201681880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201681960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5618;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 201682007 rs80299904 CA C 421 PASS INDEL;BAVGPOST=0.978;BRSQ=0.799;LDAF=0.0472;AVGPOST=0.9874;RSQ=0.9070;ERATE=0.0011;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 201682051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9530;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201682053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7331;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201682080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7291;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201682123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201682188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201682236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7373;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201682378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6071;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0010;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 201682465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7588;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201682484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201682508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6576;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201682560 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5610;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0007;THETA=0.0011;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 201682578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201682597 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6560;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201682720 . G GA 531 PASS INDEL;BAVGPOST=0.974;BRSQ=0.587;LDAF=0.0667;AVGPOST=0.9210;RSQ=0.4917;ERATE=0.0172;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201682764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.6141;AVGPOST=0.9833;RSQ=0.9736;ERATE=0.0021;THETA=0.0008;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 201682769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6799;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201682817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201682848 . T TA 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7742;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201682938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4531;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201682962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4569;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0271;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 201683196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9990;RSQ=0.9783;ERATE=0.0002;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201683199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201683238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7447;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201683291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9671;ERATE=0.0002;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201683321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5616;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 201683348 . TTTA T 238 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5542;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201683352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0004;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201683584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6402;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201683737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9750;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201683774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201683785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683793 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0081;AVGPOST=0.9968;RSQ=0.8525;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201683835 rs72508305 C CAG 85393 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5566;AVGPOST=0.9933;RSQ=0.9889;ERATE=0.0017;THETA=0.0009;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 201683862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201683889 . GA G 2430 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0002;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201683898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201683912 . T TA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201683995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5557;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0009;THETA=0.0053;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 201684054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0047;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201684101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201684166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.5444;AVGPOST=0.9887;RSQ=0.9848;ERATE=0.0004;THETA=0.0008;AC=1189;AN=2184 GT:DS:GL:BD 0.54441392 1
1 201684167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5421;AVGPOST=0.9867;RSQ=0.9822;ERATE=0.0005;THETA=0.0011;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 201684174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.5832;AVGPOST=0.9853;RSQ=0.9794;ERATE=0.0007;THETA=0.0004;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 201684179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.5398;AVGPOST=0.9844;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 201684181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201684234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201684299 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6137;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 201684414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0303;AVGPOST=0.9988;RSQ=0.9837;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201684429 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4110;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201684433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6007;AVGPOST=0.9955;RSQ=0.9929;ERATE=0.0005;THETA=0.0028;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 201684504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201684582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8907;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201684705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0529;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0002;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 201684716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8162;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201684751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7904;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201684804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7643;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201684901 . A AAAAC 809 PASS INDEL;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8319;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201685297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201685310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5373;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 201685363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201685364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6557;AVGPOST=0.9960;RSQ=0.9927;ERATE=0.0008;THETA=0.0005;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 201685445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8563;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201685483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201685488 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201685581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4786;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201685639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201685713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0175;AVGPOST=0.9993;RSQ=0.9834;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201685757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0165;AVGPOST=0.9975;RSQ=0.9403;ERATE=0.0003;THETA=0.0016;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201685770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201685901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201685967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5715;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0006;THETA=0.0014;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 201685970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5713;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 201685979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5715;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 201685993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201686092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0023;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201686100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2134;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 201686158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201686563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201686637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201686701 . TGA T 307 PASS INDEL;BAVGPOST=0.978;BRSQ=0.648;LDAF=0.0463;AVGPOST=0.9527;RSQ=0.5690;ERATE=0.0182;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201686701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0061;AVGPOST=0.9939;RSQ=0.6358;ERATE=0.0042;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201686703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201686867 . TTTCCTTTCC T 230 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0051;AVGPOST=0.9936;RSQ=0.4690;ERATE=0.0015;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201687068 rs71827048 T TTC 12680 PASS INDEL;BAVGPOST=0.962;BRSQ=0.879;LDAF=0.1513;AVGPOST=0.9727;RSQ=0.9221;ERATE=0.0015;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 201687121 . C CT 1510 PASS INDEL;BAVGPOST=0.948;BRSQ=0.783;LDAF=0.1290;AVGPOST=0.9428;RSQ=0.8103;ERATE=0.0035;THETA=0.0009;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201687131 rs3076137 T TTTC 7803 PASS INDEL;BAVGPOST=0.953;BRSQ=0.800;LDAF=0.1236;AVGPOST=0.9631;RSQ=0.8812;ERATE=0.0005;THETA=0.0005;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 201687133 . TC T 662 PASS INDEL;BAVGPOST=0.794;BRSQ=0.173;LDAF=0.2242;AVGPOST=0.7294;RSQ=0.3270;ERATE=0.0174;THETA=0.0007;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 201687142 . TTC T 501 PASS INDEL;BAVGPOST=0.977;BRSQ=0.569;LDAF=0.0529;AVGPOST=0.9372;RSQ=0.4796;ERATE=0.0097;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201687165 rs59737573 CT C 10754 PASS INDEL;BAVGPOST=0.916;BRSQ=0.761;LDAF=0.2253;AVGPOST=0.9034;RSQ=0.7796;ERATE=0.0123;THETA=0.0050;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 201687167 . GTC G 132 PASS INDEL;BAVGPOST=0.984;BRSQ=0.509;LDAF=0.0313;AVGPOST=0.9590;RSQ=0.4642;ERATE=0.0068;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201687233 . CTCTT C 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6159;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201687247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0050;AVGPOST=0.9926;RSQ=0.4348;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201687328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.478;LDAF=0.0092;AVGPOST=0.9893;RSQ=0.5348;ERATE=0.0022;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201687346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8513;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201687405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5849;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201687523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201687890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.448;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3460;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201687966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5067;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201688167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201688401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201688440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7334;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201688501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201688555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201688942 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2746;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 201688966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201688996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201689267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201689302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201689399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201689546 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2685;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 201689755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201689826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8506;ERATE=0.0007;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201689870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690154 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201690564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5300;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1646;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 201690733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201690855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6547;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201691029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0222;AVGPOST=0.9924;RSQ=0.8607;ERATE=0.0020;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201691030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6767;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201691053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201691069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7404;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201691128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1187;AVGPOST=0.9931;RSQ=0.9800;ERATE=0.0010;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 201691235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6649;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201691245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0187;AVGPOST=0.9894;RSQ=0.7798;ERATE=0.0006;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201691283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.584;LDAF=0.0117;AVGPOST=0.9933;RSQ=0.7895;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201691384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.878;LDAF=0.5918;AVGPOST=0.8209;RSQ=0.7268;ERATE=0.0365;THETA=0.0007;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 201691466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1163;AVGPOST=0.9821;RSQ=0.9395;ERATE=0.0012;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 201691563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.360;LDAF=0.0032;AVGPOST=0.9947;RSQ=0.3231;ERATE=0.0012;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201691573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7585;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201691581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.537;LDAF=0.0118;AVGPOST=0.9863;RSQ=0.5506;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201691596 . AATT A 15 PASS INDEL;BAVGPOST=0.949;BRSQ=0.179;LDAF=0.0579;AVGPOST=0.9095;RSQ=0.3572;ERATE=0.0054;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201691652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.971;LDAF=0.5367;AVGPOST=0.9707;RSQ=0.9611;ERATE=0.0044;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 201691688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1250;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0006;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201691795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9414;ERATE=0.0004;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201691935 . C CCT 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5488;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201692052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6533;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201692097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.929;LDAF=0.1248;AVGPOST=0.9948;RSQ=0.9836;ERATE=0.0011;THETA=0.0012;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 201692248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8441;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201692281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.733;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8158;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201692354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5479;ERATE=0.0006;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201692363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1251;AVGPOST=0.9977;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 201692490 rs71077982 T TTTTC 20202 PASS INDEL;BAVGPOST=0.922;BRSQ=0.872;LDAF=0.5042;AVGPOST=0.8620;RSQ=0.8119;ERATE=0.0224;THETA=0.0003;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 201692507 . T TTC 18635 PASS INDEL;BAVGPOST=0.917;BRSQ=0.865;LDAF=0.4741;AVGPOST=0.8732;RSQ=0.8233;ERATE=0.0191;THETA=0.0012;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 201692509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8045;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201692554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6415;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201692580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1241;AVGPOST=0.9969;RSQ=0.9918;ERATE=0.0004;THETA=0.0006;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 201692625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7080;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201692660 . AAAG A 2745 PASS INDEL;BAVGPOST=0.952;BRSQ=0.768;LDAF=0.1157;AVGPOST=0.9326;RSQ=0.7682;ERATE=0.0123;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 201692703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.798;LDAF=0.0128;AVGPOST=0.9969;RSQ=0.9064;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201692759 . CAA C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201692769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8000;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201692781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201692801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4176;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201692825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201692859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201692878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9127;ERATE=0.0004;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201693083 rs111289681 G GA 11464 PASS INDEL;BAVGPOST=0.984;BRSQ=0.949;LDAF=0.1401;AVGPOST=0.9683;RSQ=0.9147;ERATE=0.0074;THETA=0.0011;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 201693213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201693247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8483;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201693277 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201693374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4559;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201693380 . A AG 2204 PASS INDEL;BAVGPOST=0.980;BRSQ=0.763;LDAF=0.0413;AVGPOST=0.9756;RSQ=0.7707;ERATE=0.0028;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201693584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4778;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201693587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9288;ERATE=0.0006;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201693732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.823;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8903;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201693849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8532;ERATE=0.0005;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201693985 . GT G 1387 PASS INDEL;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9751;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201694147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1245;AVGPOST=0.9972;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201694390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201694434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9323;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201694465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201694502 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6938;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201694881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0827;AVGPOST=0.9967;RSQ=0.9833;ERATE=0.0003;THETA=0.0008;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201694909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6406;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201694998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201695144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0133;AVGPOST=0.9984;RSQ=0.9488;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201695150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201695240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9024;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201695286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7944;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201695287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.555;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7925;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201695447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201695507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9332;ERATE=0.0003;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201695508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201695512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5495;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 201695596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6781;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201695637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5089;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201695646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201695708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.888;LDAF=0.0798;AVGPOST=0.9817;RSQ=0.9129;ERATE=0.0015;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 201695772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.929;LDAF=0.0888;AVGPOST=0.9899;RSQ=0.9562;ERATE=0.0010;THETA=0.0008;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201695796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.6722;AVGPOST=0.9813;RSQ=0.9710;ERATE=0.0017;THETA=0.0004;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 201695854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0819;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201695995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6093;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201695997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9084;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201696254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201696291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201696307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0087;AVGPOST=0.9960;RSQ=0.8254;ERATE=0.0008;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201696478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3782;AVGPOST=0.9952;RSQ=0.9937;ERATE=0.0008;THETA=0.0014;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 201696567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.6533;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201696578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3679;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0009;THETA=0.0015;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 201696729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7088;ERATE=0.0007;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201696770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201696785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201696854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5293;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201696984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.863;LDAF=0.1754;AVGPOST=0.9657;RSQ=0.9233;ERATE=0.0015;THETA=0.0003;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 201697036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.563;LDAF=0.0144;AVGPOST=0.9934;RSQ=0.8124;ERATE=0.0008;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201697118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.551;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5070;ERATE=0.0007;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201697248 . C CA 676 PASS INDEL;BAVGPOST=0.926;BRSQ=0.765;LDAF=0.2223;AVGPOST=0.8186;RSQ=0.5999;ERATE=0.0135;THETA=0.0008;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 201697261 . AAT A 2431 PASS INDEL;BAVGPOST=0.882;BRSQ=0.742;LDAF=0.2588;AVGPOST=0.8851;RSQ=0.7928;ERATE=0.0110;THETA=0.0009;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 201697266 . AT A 8041 PASS INDEL;BAVGPOST=0.918;BRSQ=0.853;LDAF=0.3218;AVGPOST=0.9496;RSQ=0.9300;ERATE=0.0010;THETA=0.0004;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 201697267 . TAA T 1036 PASS INDEL;BAVGPOST=0.969;BRSQ=0.884;LDAF=0.1447;AVGPOST=0.9652;RSQ=0.9124;ERATE=0.0007;THETA=0.0010;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 201697268 rs35941022 A AT 9164 PASS INDEL;BAVGPOST=0.971;BRSQ=0.896;LDAF=0.1523;AVGPOST=0.9772;RSQ=0.9419;ERATE=0.0006;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 201697270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201697297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7353;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201697347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9340;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201697375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201697393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0208;AVGPOST=0.9941;RSQ=0.8830;ERATE=0.0005;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201697493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8221;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201697562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201697786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8017;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201697862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9984;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201697939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201697982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9978;RSQ=0.9418;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201697994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3739;AVGPOST=0.9943;RSQ=0.9907;ERATE=0.0015;THETA=0.0006;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 201698145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7376;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201698168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.4999;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201698241 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0043;AVGPOST=0.9962;RSQ=0.6529;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201698264 . AC A 986 PASS INDEL;BAVGPOST=0.980;BRSQ=0.614;LDAF=0.0386;AVGPOST=0.9662;RSQ=0.6397;ERATE=0.0081;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201698268 . A AT 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.6007;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201698295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201698309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7722;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201698314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201698505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.914;LDAF=0.0672;AVGPOST=0.9914;RSQ=0.9550;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 201698555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9196;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201698584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201698586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201698591 . C CAGCTGTTTTCAATTA 91746 PASS INDEL;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1882;AVGPOST=0.9922;RSQ=0.9826;ERATE=0.0015;THETA=0.0010;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 201698607 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201698717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201698759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1764;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 201698842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5372;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201698891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7441;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201698920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8172;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201698932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3644;AVGPOST=0.9952;RSQ=0.9929;ERATE=0.0009;THETA=0.0005;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 201698995 . A AC 641 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9963;RSQ=0.8629;ERATE=0.0007;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201699028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6878;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201699272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.967;LDAF=0.3610;AVGPOST=0.9912;RSQ=0.9862;ERATE=0.0008;THETA=0.0005;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 201699310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4449;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201699412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.723;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8103;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201699460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1896;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0006;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 201699499 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7187;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201699500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0446;AVGPOST=0.9958;RSQ=0.9671;ERATE=0.0008;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201699568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6088;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201699580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201699586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0254;AVGPOST=0.9975;RSQ=0.9585;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201699591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1632;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 201699687 . TG T 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201699689 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9669;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201699799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8458;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201699924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201700011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201700018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.902;LDAF=0.0382;AVGPOST=0.9945;RSQ=0.9459;ERATE=0.0004;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 201700044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3657;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0009;THETA=0.0012;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 201700136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0154;AVGPOST=0.9927;RSQ=0.8078;ERATE=0.0012;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201700236 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9740;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201700336 . ATAG A 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3215;ERATE=0.0005;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201700455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1883;AVGPOST=0.9964;RSQ=0.9921;ERATE=0.0005;THETA=0.0008;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 201700471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3633;AVGPOST=0.9941;RSQ=0.9910;ERATE=0.0009;THETA=0.0013;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 201700474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0042;AVGPOST=0.9947;RSQ=0.4491;ERATE=0.0010;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201700551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1775;AVGPOST=0.9977;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 201700600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.6963;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201700637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.3625;AVGPOST=0.9846;RSQ=0.9773;ERATE=0.0017;THETA=0.0027;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 201700670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3388;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201700674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.859;LDAF=0.8199;AVGPOST=0.9296;RSQ=0.8325;ERATE=0.0053;THETA=0.0004;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 201700709 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4902;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201700752 . TAA T 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8338;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201700791 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201700795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0083;AVGPOST=0.9991;RSQ=0.9517;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201700863 . TC T 1997 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201700933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9522;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201700934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0515;AVGPOST=0.9990;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201700935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9704;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201700952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.902;LDAF=0.0313;AVGPOST=0.9927;RSQ=0.9115;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201700980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8812;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201701088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701206 rs78782375 C CA 9885 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0620;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201701281 . A AC 430 PASS INDEL;BAVGPOST=0.992;BRSQ=0.928;LDAF=0.0598;AVGPOST=0.9955;RSQ=0.9678;ERATE=0.0005;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 201701285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201701343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201701461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5013;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0007;THETA=0.0008;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 201701505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201701523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6955;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 201701589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0933;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 201701591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7854;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0194;AVGPOST=0.9989;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201701724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6733;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201701745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0329;AVGPOST=0.9985;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201701760 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4434;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201701834 . CTG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201701892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0595;AVGPOST=0.9977;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 201701968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201701974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0920;AVGPOST=0.9974;RSQ=0.9897;ERATE=0.0004;THETA=0.0004;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201702177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0938;AVGPOST=0.9979;RSQ=0.9902;ERATE=0.0007;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 201702250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201702251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201702398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201702536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0619;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201702551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201702563 rs72019769 TGTGG T 19644 PASS INDEL;BAVGPOST=0.783;BRSQ=0.613;LDAF=0.5681;AVGPOST=0.7680;RSQ=0.6103;ERATE=0.0890;THETA=0.0004;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 201702686 rs72019769 TGG T 7265 PASS INDEL;BAVGPOST=0.971;BRSQ=0.928;LDAF=0.2718;AVGPOST=0.9350;RSQ=0.8776;ERATE=0.0150;THETA=0.0006;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 201702688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201702892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201703127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3390;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 201703135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1662;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 201703192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0070;AVGPOST=0.9982;RSQ=0.9063;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201703221 . TA T 277 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8902;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201703243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5563;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0618;AVGPOST=0.9990;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201703458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0617;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201703473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201703474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.5130;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201703798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201703846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1662;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 201703903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201703954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704008 . CA C 227 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8404;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201704017 . TC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6944;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201704124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201704127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0175;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201704165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0618;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201704245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9855;ERATE=0.0006;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201704268 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201704373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201704420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0646;AVGPOST=0.9959;RSQ=0.9759;ERATE=0.0006;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 201704531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8729;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201704562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201704577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201704612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201704620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6957;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 201704714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201704785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704838 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201704904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201704936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201704952 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6952;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 201704991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0616;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201704994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9537;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201705000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0628;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 201705001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201705017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201705029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0617;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201705066 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201705078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0645;AVGPOST=0.9957;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 201705165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0565;AVGPOST=0.9950;RSQ=0.9665;ERATE=0.0008;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 201705169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0183;AVGPOST=0.9988;RSQ=0.9724;ERATE=0.0004;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201705233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9162;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201705305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0142;AVGPOST=0.9952;RSQ=0.8540;ERATE=0.0006;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201705378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0564;AVGPOST=0.9943;RSQ=0.9614;ERATE=0.0005;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 201705390 . CA C 184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8025;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201705421 rs57971684 A AAAT 7673 PASS INDEL;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0332;AVGPOST=0.9986;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201705422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6145;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201705425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0227;AVGPOST=0.9971;RSQ=0.9486;ERATE=0.0005;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201705453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.931;LDAF=0.3049;AVGPOST=0.9690;RSQ=0.9516;ERATE=0.0009;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 201705478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0261;AVGPOST=0.9948;RSQ=0.9231;ERATE=0.0005;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201705481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.914;LDAF=0.6232;AVGPOST=0.9293;RSQ=0.8960;ERATE=0.0141;THETA=0.0003;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 201705485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0047;AVGPOST=0.9959;RSQ=0.6638;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201705589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6368;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201705598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.850;LDAF=0.0173;AVGPOST=0.9942;RSQ=0.8866;ERATE=0.0005;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201705658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.849;LDAF=0.0178;AVGPOST=0.9952;RSQ=0.9010;ERATE=0.0007;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201705659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.788;LDAF=0.0171;AVGPOST=0.9910;RSQ=0.8030;ERATE=0.0006;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201705734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8535;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201705783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0169;AVGPOST=0.9981;RSQ=0.9495;ERATE=0.0005;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201705790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.611;LDAF=0.0112;AVGPOST=0.9917;RSQ=0.7147;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201705827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5834;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201705911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0576;AVGPOST=0.9945;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 201705965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5978;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201706015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5299;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201706104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.927;LDAF=0.0628;AVGPOST=0.9931;RSQ=0.9576;ERATE=0.0004;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 201706159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5926;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201706193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5193;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201706420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.934;LDAF=0.5028;AVGPOST=0.9298;RSQ=0.9042;ERATE=0.0211;THETA=0.0005;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 201706493 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.937;LDAF=0.1197;AVGPOST=0.9856;RSQ=0.9536;ERATE=0.0004;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 201706494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0065;AVGPOST=0.9961;RSQ=0.7692;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201706740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9175;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201706768 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0169;AVGPOST=0.9990;RSQ=0.9712;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201706805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.942;LDAF=0.0473;AVGPOST=0.9932;RSQ=0.9365;ERATE=0.0006;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 201706817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4589;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201706823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0114;AVGPOST=0.9965;RSQ=0.8834;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201706994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201707200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0176;AVGPOST=0.9975;RSQ=0.9360;ERATE=0.0007;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201707210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.3798;AVGPOST=0.9825;RSQ=0.9731;ERATE=0.0011;THETA=0.0008;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 201707263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4017;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201707462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201707528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201707537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0087;AVGPOST=0.9971;RSQ=0.8893;ERATE=0.0007;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201707539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201707567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1029;AVGPOST=0.9951;RSQ=0.9799;ERATE=0.0004;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 201707582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1844;AVGPOST=0.9952;RSQ=0.9885;ERATE=0.0005;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 201707591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201707603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201707707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0057;AVGPOST=0.9973;RSQ=0.8055;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201707717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0033;AVGPOST=0.9950;RSQ=0.4582;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201707813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7719;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201707829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.637;LDAF=0.0093;AVGPOST=0.9931;RSQ=0.7095;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201707837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.531;LDAF=0.0097;AVGPOST=0.9897;RSQ=0.5738;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201707893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4138;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201707928 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0101;AVGPOST=0.9960;RSQ=0.8397;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201707967 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8716;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201707974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.662;LDAF=0.8922;AVGPOST=0.8862;RSQ=0.5242;ERATE=0.0326;THETA=0.0006;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 201708104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.838;LDAF=0.0235;AVGPOST=0.9817;RSQ=0.6898;ERATE=0.0027;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201708125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0386;AVGPOST=0.9905;RSQ=0.9088;ERATE=0.0010;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201708127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0183;AVGPOST=0.9955;RSQ=0.8924;ERATE=0.0007;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201708147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.558;LDAF=0.0682;AVGPOST=0.9245;RSQ=0.5534;ERATE=0.0098;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201708149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6678;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201708177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201708234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4532;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.755;LDAF=0.0162;AVGPOST=0.9951;RSQ=0.8769;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201708279 rs74703748 A AT 17149 PASS INDEL;BAVGPOST=0.950;BRSQ=0.868;LDAF=0.1758;AVGPOST=0.9890;RSQ=0.9739;ERATE=0.0013;THETA=0.0005;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 201708288 . A AT 36 PASS INDEL;BAVGPOST=0.990;BRSQ=0.316;LDAF=0.0143;AVGPOST=0.9793;RSQ=0.4479;ERATE=0.0020;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201708291 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0002;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201708423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9202;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201708497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201708527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201708593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7885;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201708635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9735;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201708648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6652;AVGPOST=0.9929;RSQ=0.9890;ERATE=0.0006;THETA=0.0007;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 201708685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9156;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201708710 . GA G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708730 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9977;RSQ=0.9243;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201708755 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7392;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201708761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201708882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5399;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201708890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3923;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 201708995 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201709021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201709280 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8148;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201709291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8365;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201709313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8490;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201709526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709680 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7054;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201709887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4942;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201709918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0537;AVGPOST=0.9987;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 201709921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7429;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201710020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201710150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201710155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201710165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7435;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201710184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201710246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201710371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3394;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0008;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 201710414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7945;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201710457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6171;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0005;THETA=0.0007;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 201710502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0083;AVGPOST=0.9992;RSQ=0.9690;ERATE=0.0002;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201710540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9889;ERATE=0.0003;THETA=0.0019;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201710636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201710640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0105;AVGPOST=0.9994;RSQ=0.9760;ERATE=0.0002;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201710781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201710787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7501;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201710852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0178;AVGPOST=0.9983;RSQ=0.9618;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201710900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201711003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201711007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201711150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5901;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201711156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201711176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6911;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201711276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5332;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201711414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201711502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7807;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711515 . A AT 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0407;AVGPOST=0.9988;RSQ=0.9885;ERATE=0.0004;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201711676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201711752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8953;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201711780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8344;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201711841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201711881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201711974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201712056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201712090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201712098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0022;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201712128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201712138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201712178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1449;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0029;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 201712309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0999;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201712411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712496 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201712618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201712782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7116;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201712913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1688;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 201712942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0002;THETA=0.0020;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201713025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201713030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0240;AVGPOST=0.9986;RSQ=0.9793;ERATE=0.0002;THETA=0.0031;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201713207 . T TG 2646 PASS INDEL;BAVGPOST=0.973;BRSQ=0.893;LDAF=0.1536;AVGPOST=0.9708;RSQ=0.9205;ERATE=0.0008;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 201713222 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.895;LDAF=0.1510;AVGPOST=0.9650;RSQ=0.9023;ERATE=0.0029;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 201713223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.4479;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201713316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0774;AVGPOST=0.9908;RSQ=0.9621;ERATE=0.0006;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 201713392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6110;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201713421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.896;LDAF=0.1856;AVGPOST=0.9684;RSQ=0.9256;ERATE=0.0029;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 201713479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.7157;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201713519 . TGCCG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5473;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201713524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201713528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201713529 . A AT 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6334;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201713648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0068;AVGPOST=0.9999;RSQ=0.9907;ERATE=0.0002;THETA=0.0047;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201713881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201713896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0002;THETA=0.0026;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201713942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8409;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201713948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1338;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 201714066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201714115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714195 . CT C 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8635;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201714328 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201714411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6666;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201714527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6540;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714557 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201714563 . GA G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6699;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201714572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0855;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201714717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0800;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201714811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0052;AVGPOST=0.9974;RSQ=0.8034;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201714844 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201714865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201714923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4716;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 201715000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8752;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201715025 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4711;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0007;THETA=0.0009;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 201715030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201715050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9972;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 201715053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0307;AVGPOST=0.9968;RSQ=0.9627;ERATE=0.0004;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201715104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7778;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201715217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5963;AVGPOST=0.9906;RSQ=0.9878;ERATE=0.0012;THETA=0.0004;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 201715235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7417;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201715410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4711;AVGPOST=0.9951;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 201715457 . TC T 9217 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0873;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 201715484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4709;AVGPOST=0.9978;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 201715514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4685;AVGPOST=0.9957;RSQ=0.9941;ERATE=0.0008;THETA=0.0002;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 201715553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201715626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0002;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201715636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5531;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201715687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8429;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201715854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5549;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201715883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8042;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201715973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0442;AVGPOST=0.9937;RSQ=0.9434;ERATE=0.0003;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201716293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3520;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0007;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 201716347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4711;AVGPOST=0.9960;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 201716410 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0053;AVGPOST=0.9928;RSQ=0.5292;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201716438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9993;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201716807 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4043;ERATE=0.0005;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201716856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7539;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201716885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8670;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201717339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7376;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201717463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201717601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5692;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201717641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9027;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201717656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201717724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201717847 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201718020 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0106;AVGPOST=0.9980;RSQ=0.9219;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201718079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9820;ERATE=0.0003;THETA=0.0091;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201718241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201718259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0110;AVGPOST=0.9984;RSQ=0.9501;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201718283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201718368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6403;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201718420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.671;LDAF=0.9692;AVGPOST=0.9697;RSQ=0.6061;ERATE=0.0029;THETA=0.0004;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 201718689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.853;LDAF=0.0254;AVGPOST=0.9940;RSQ=0.9058;ERATE=0.0005;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201719063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0182;AVGPOST=0.9990;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201719107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201719139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201719299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201719319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201719444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0309;AVGPOST=0.9988;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201719454 rs71780436 AT A 11307 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1722;AVGPOST=0.9920;RSQ=0.9795;ERATE=0.0011;THETA=0.0003;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 201719674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0110;AVGPOST=0.9931;RSQ=0.7633;ERATE=0.0010;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201719692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201719822 . A AT 59 PASS INDEL;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0094;AVGPOST=0.9914;RSQ=0.6317;ERATE=0.0010;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201719860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0346;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201719942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201719952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201719955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6435;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201719978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201720166 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6201;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201720227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0346;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201720245 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1722;AVGPOST=0.9978;RSQ=0.9933;ERATE=0.0007;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 201720277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201720313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201720436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6064;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201720462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201720466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9188;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201720565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6992;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201720611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201720751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201720817 . T TA 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201721007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5697;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 201721021 rs10564976 GCT G 386 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201721040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201721113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201721119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5661;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201721331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201721356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0086;AVGPOST=0.9974;RSQ=0.8746;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201721438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201721500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201721526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5713;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201721687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2535;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 201721701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9253;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201721749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9640;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201721759 . A AT 102 PASS INDEL;BAVGPOST=0.989;BRSQ=0.627;LDAF=0.0256;AVGPOST=0.9659;RSQ=0.4549;ERATE=0.0084;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201721786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7958;ERATE=0.0003;THETA=0.0100;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201721798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6910;ERATE=0.0003;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201721820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201721845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.887;LDAF=0.0668;AVGPOST=0.9906;RSQ=0.9392;ERATE=0.0007;THETA=0.0080;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 201722217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0723;AVGPOST=0.9942;RSQ=0.9709;ERATE=0.0032;THETA=0.0094;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 201722537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8981;ERATE=0.0004;THETA=0.0122;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201722600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201722680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0542;AVGPOST=0.9929;RSQ=0.9484;ERATE=0.0023;THETA=0.0052;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 201722709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0103;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201722790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.784;LDAF=0.0259;AVGPOST=0.9875;RSQ=0.8085;ERATE=0.0096;THETA=0.0098;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201722803 rs11314582 CA C 156 PASS INDEL;BAVGPOST=0.989;BRSQ=0.659;LDAF=0.0174;AVGPOST=0.9839;RSQ=0.6161;ERATE=0.0064;THETA=0.0072;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201722836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0157;AVGPOST=0.9983;RSQ=0.9540;ERATE=0.0003;THETA=0.0112;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201722896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0636;AVGPOST=0.9926;RSQ=0.9563;ERATE=0.0005;THETA=0.0078;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 201723030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.698;LDAF=0.0103;AVGPOST=0.9951;RSQ=0.8305;ERATE=0.0003;THETA=0.0109;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201723123 MERGED_DEL_2_6062 ATTTTTCTTCCACATTTTCCAAATTAATACTTGTCTCTGACTTTCTGTCATTAAAACATTAGACCTCTTTTGGTTTGGTGTCACCCAATTCATGAATTGCTTCTTATTCAAATGAACTCTTTAAAATTGTATTGTGCCTTAGATTTTTCTTTAACAGTTTGGTGTCAGAAGTAGGATATAAAGTAGAATC A . . SV;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0069;AVGPOST=0.9947;RSQ=0.6729;ERATE=0.0049;THETA=0.0072;CIEND=-12;27;CIPOS=-28;11;END=161565762;HOMLEN=3;HOMSEQ=TTT;SOURCE=EMBLdelly_161484104_161565763; GT:DS:GL:BD 0.00549451 0
1 201723157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.897;LDAF=0.4022;AVGPOST=0.9246;RSQ=0.8903;ERATE=0.0146;THETA=0.0044;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 201723177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.707;LDAF=0.0133;AVGPOST=0.9906;RSQ=0.7412;ERATE=0.0016;THETA=0.0117;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201723187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.836;LDAF=0.7689;AVGPOST=0.9195;RSQ=0.8442;ERATE=0.0069;THETA=0.0126;AC=1712;AN=2184 GT:DS:GL:BD 0.78388280 1
1 201723228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0136;AVGPOST=0.9941;RSQ=0.8250;ERATE=0.0005;THETA=0.0155;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201723252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.641;LDAF=0.0521;AVGPOST=0.9594;RSQ=0.7086;ERATE=0.0066;THETA=0.0442;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 201723263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.562;LDAF=0.1559;AVGPOST=0.8747;RSQ=0.6062;ERATE=0.0182;THETA=0.0407;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 201723333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.514;LDAF=0.1016;AVGPOST=0.9036;RSQ=0.5771;ERATE=0.0093;THETA=0.0027;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 201723377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9443;ERATE=0.0006;THETA=0.0166;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201723544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.889;LDAF=0.1277;AVGPOST=0.9665;RSQ=0.8879;ERATE=0.0015;THETA=0.0027;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 201723989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7758;ERATE=0.0004;THETA=0.0136;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201724113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0597;AVGPOST=0.9950;RSQ=0.9674;ERATE=0.0004;THETA=0.0051;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 201724312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0004;THETA=0.0137;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201724843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5084;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201725243 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0033;AVGPOST=0.9964;RSQ=0.5409;ERATE=0.0005;THETA=0.0077;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201725449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6787;ERATE=0.0003;THETA=0.0079;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201726115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201726176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201726190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5785;ERATE=0.0004;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201726246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7880;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201726334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0621;AVGPOST=0.9973;RSQ=0.9813;ERATE=0.0005;THETA=0.0099;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 201726505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201726637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201726854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2125;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0002;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 201726922 . AAT A 19 PASS INDEL;BAVGPOST=0.984;BRSQ=0.178;LDAF=0.0202;AVGPOST=0.9761;RSQ=0.5363;ERATE=0.0015;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201727105 . TTA T 778 PASS INDEL;BAVGPOST=0.745;BRSQ=0.292;LDAF=0.2275;AVGPOST=0.8731;RSQ=0.7114;ERATE=0.0068;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 201727163 . A AT 748 PASS INDEL;BAVGPOST=0.611;BRSQ=0.269;LDAF=0.4551;AVGPOST=0.6569;RSQ=0.4205;ERATE=0.0300;THETA=0.0003;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 201727220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.520;LDAF=0.0437;AVGPOST=0.9654;RSQ=0.6766;ERATE=0.0024;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201727271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0195;AVGPOST=0.9976;RSQ=0.9543;ERATE=0.0005;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201727345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0279;AVGPOST=0.9973;RSQ=0.9659;ERATE=0.0005;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 201727439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9543;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201727534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201727633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6758;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201727635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9202;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201727686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7326;AVGPOST=0.9958;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 201727696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9982;RSQ=0.9321;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201727703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0431;AVGPOST=0.9926;RSQ=0.9327;ERATE=0.0005;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 201727737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4757;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201727751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201727834 . C CA 721 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0143;AVGPOST=0.9931;RSQ=0.8324;ERATE=0.0013;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201727977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0110;AVGPOST=0.9927;RSQ=0.7372;ERATE=0.0019;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201727985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9255;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201728241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201728323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201728331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201728403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201728426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201728467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201728499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201728576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201728598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9491;ERATE=0.0011;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201728611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201728747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201728750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9387;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201728778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201728982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5142;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201729092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201729134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201729146 . C CT 1439 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201729396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9725;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201729473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201729483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201729488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4845;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201729549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201729644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9468;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201729712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7125;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201729735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5872;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201729854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9983;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201729880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7695;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201729912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201729963 . AC A 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4684;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201729992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4434;AVGPOST=0.9858;RSQ=0.9795;ERATE=0.0038;THETA=0.0002;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 201730365 . GC G 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201730540 . A AT 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0050;AVGPOST=0.9928;RSQ=0.4195;ERATE=0.0016;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201730591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201730654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8900;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201730743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7939;ERATE=0.0014;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201730783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201730857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201730861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201730906 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201730956 . A AGT 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6776;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201730968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7309;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 201730992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0308;AVGPOST=0.9989;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201731125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201731126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201731187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201731196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1069;AVGPOST=0.9960;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 201731550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201731559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4515;AVGPOST=0.9961;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 201731589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201731619 . GACA G 1576 PASS INDEL;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0184;AVGPOST=0.9971;RSQ=0.9334;ERATE=0.0006;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201731631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5742;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201731683 . TG T 54 PASS INDEL;BAVGPOST=0.997;BRSQ=0.699;LDAF=0.0087;AVGPOST=0.9912;RSQ=0.6096;ERATE=0.0023;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201731688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7717;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201731702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5773;AVGPOST=0.9966;RSQ=0.9956;ERATE=0.0008;THETA=0.0003;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 201731718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8424;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201732025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2671;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201732052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5747;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 201732166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0067;AVGPOST=0.9972;RSQ=0.8344;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201732243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5148;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201732295 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0231;AVGPOST=0.9973;RSQ=0.9563;ERATE=0.0005;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201732363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3818;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201732393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4937;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201732506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8229;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201732645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0069;AVGPOST=0.9972;RSQ=0.8559;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201732656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9365;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201732716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6244;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201732774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201732829 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0120;AVGPOST=0.9983;RSQ=0.9360;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201732845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4423;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0002;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 201733008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201733058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6435;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201733191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.3617;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201733233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5746;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 201733290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0068;AVGPOST=0.9950;RSQ=0.6959;ERATE=0.0010;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201733291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0752;AVGPOST=0.9985;RSQ=0.9915;ERATE=0.0004;THETA=0.0006;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 201733430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.914;LDAF=0.9769;AVGPOST=0.9955;RSQ=0.9285;ERATE=0.0004;THETA=0.0008;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 201733498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9054;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201733661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4881;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201733663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201733739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9988;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 201733835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9167;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201733858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201734043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201734054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0058;AVGPOST=0.9978;RSQ=0.8454;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201734177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5748;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0005;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 201734222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201734309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201734367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6161;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201734395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201734522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8453;ERATE=0.0018;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201734566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9148;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201734704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4380;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201734767 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201735047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201735086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201735088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8123;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201735128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201735141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201735261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201735277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201735334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201735389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9319;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201735510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5509;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0007;THETA=0.0006;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 201735619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9314;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201735681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201735772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0351;AVGPOST=0.9950;RSQ=0.9455;ERATE=0.0004;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 201735968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8074;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201736073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.5498;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201736137 . A ATATC 129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5521;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201736350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5872;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201736471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5268;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201736475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201736548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201736646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7004;AVGPOST=0.9947;RSQ=0.9909;ERATE=0.0008;THETA=0.0020;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 201736668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201736691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6206;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201736715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9426;ERATE=0.0003;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201736749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6879;AVGPOST=0.9920;RSQ=0.9861;ERATE=0.0027;THETA=0.0007;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 201736843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201736895 . C CT 5596 PASS INDEL;BAVGPOST=0.665;BRSQ=0.302;LDAF=0.5921;AVGPOST=0.6925;RSQ=0.3872;ERATE=0.0756;THETA=0.0009;AC=1428;AN=2184 GT:DS:GL:BD 0.65384614 1
1 201737019 . T TA 7676 PASS INDEL;BAVGPOST=0.983;BRSQ=0.934;LDAF=0.1083;AVGPOST=0.9796;RSQ=0.9289;ERATE=0.0006;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 201737025 . CA C 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201737061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0147;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0003;THETA=0.0045;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201737089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7718;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5617;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.9375;AVGPOST=0.9988;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 201737447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4988;AVGPOST=0.9940;RSQ=0.9903;ERATE=0.0007;THETA=0.0011;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 201737556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201737639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2580;AVGPOST=0.9949;RSQ=0.9896;ERATE=0.0010;THETA=0.0007;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 201737722 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0777;AVGPOST=0.9951;RSQ=0.9745;ERATE=0.0004;THETA=0.0015;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 201737758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8772;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201737821 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8578;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5916;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201737937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0283;AVGPOST=0.9985;RSQ=0.9790;ERATE=0.0008;THETA=0.0018;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201737980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201737993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201738115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9491;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201738205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201738230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0153;AVGPOST=0.9986;RSQ=0.9605;ERATE=0.0004;THETA=0.0025;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201738245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201738270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0014;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 201738302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.9891;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0036;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 201738319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4194;AVGPOST=0.9907;RSQ=0.9855;ERATE=0.0005;THETA=0.0021;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 201738330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4978;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201738414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.4163;ERATE=0.0003;THETA=0.0059;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201738449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9030;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201738500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0098;AVGPOST=0.9967;RSQ=0.8587;ERATE=0.0003;THETA=0.0026;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201738592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0178;AVGPOST=0.9952;RSQ=0.8899;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201738655 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9880;AVGPOST=0.9989;RSQ=0.9611;ERATE=0.0003;THETA=0.0027;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 201738697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201738735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201738736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9293;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201738801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0043;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201738880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8587;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201738957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5632;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201739015 . C CT 59 PASS INDEL;BAVGPOST=0.991;BRSQ=0.543;LDAF=0.0163;AVGPOST=0.9783;RSQ=0.4530;ERATE=0.0055;THETA=0.0047;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201739049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.5967;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201739246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.932;LDAF=0.2326;AVGPOST=0.9656;RSQ=0.9264;ERATE=0.0024;THETA=0.0013;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 201739310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4718;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201739339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4993;ERATE=0.0005;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201739353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0081;AVGPOST=0.9964;RSQ=0.8003;ERATE=0.0005;THETA=0.0069;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201739382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.9628;AVGPOST=0.9918;RSQ=0.9239;ERATE=0.0035;THETA=0.0056;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 201739505 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9028;ERATE=0.0004;THETA=0.0071;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201739507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7993;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201739538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8700;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201739578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201739600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7517;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201739700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201739750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201739776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.814;LDAF=0.0104;AVGPOST=0.9968;RSQ=0.8821;ERATE=0.0005;THETA=0.0019;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201739948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0121;AVGPOST=0.9943;RSQ=0.8243;ERATE=0.0006;THETA=0.0046;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201739969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.501;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3911;ERATE=0.0006;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201740005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.893;LDAF=0.1836;AVGPOST=0.9547;RSQ=0.8823;ERATE=0.0008;THETA=0.0051;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 201740021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.934;LDAF=0.4683;AVGPOST=0.9364;RSQ=0.9028;ERATE=0.0051;THETA=0.0031;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 201740037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0035;AVGPOST=0.9950;RSQ=0.3573;ERATE=0.0009;THETA=0.0067;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201740052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0169;AVGPOST=0.9935;RSQ=0.8337;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201740055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4184;ERATE=0.0007;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201740128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8299;ERATE=0.0005;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201740142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.941;LDAF=0.4493;AVGPOST=0.9500;RSQ=0.9257;ERATE=0.0011;THETA=0.0005;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 201740185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.663;LDAF=0.0056;AVGPOST=0.9960;RSQ=0.6824;ERATE=0.0006;THETA=0.0049;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201740193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5378;ERATE=0.0005;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201740201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.878;LDAF=0.0251;AVGPOST=0.9913;RSQ=0.8649;ERATE=0.0004;THETA=0.0012;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201740229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201740485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201740501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0129;AVGPOST=0.9952;RSQ=0.8459;ERATE=0.0008;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201740502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0177;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201740674 . A AAG 84 PASS INDEL;BAVGPOST=0.867;BRSQ=0.073;LDAF=0.1944;AVGPOST=0.6971;RSQ=0.1697;ERATE=0.0299;THETA=0.0017;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201740836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201740897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8524;ERATE=0.0012;THETA=0.0088;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201740920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5495;ERATE=0.0003;THETA=0.0121;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201740973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4767;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201741097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0005;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741105 . A ATT 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3652;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0222;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201741355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.982;LDAF=0.6289;AVGPOST=0.9814;RSQ=0.9717;ERATE=0.0041;THETA=0.0008;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 201741427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201741518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7760;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201741569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0015;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201741570 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8657;ERATE=0.0003;THETA=0.0068;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201741604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9021;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=1970;AN=2184 GT:DS:GL:BD 0.90201467 1
1 201741773 . C CT 89 PASS INDEL;BAVGPOST=0.981;BRSQ=0.415;LDAF=0.0284;AVGPOST=0.9627;RSQ=0.4728;ERATE=0.0103;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201741819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8149;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201741820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1824;AVGPOST=0.9969;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 201741970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9673;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201742019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201742026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201742095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201742144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201742186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0017;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201742249 . TTGTGAACA T 1530 PASS INDEL;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0064;AVGPOST=0.9964;RSQ=0.7541;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201742258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201742438 . CAACA C 296 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201742449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9041;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0002;THETA=0.0005;AC=1974;AN=2184 GT:DS:GL:BD 0.90384614 1
1 201742597 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201742698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201742776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201742947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0022;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201742971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201742976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201743005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201743076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201743083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8073;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201743139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8784;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201743150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8854;AVGPOST=0.9981;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=1934;AN=2184 GT:DS:GL:BD 0.88553113 1
1 201743204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201743254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9029;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=1972;AN=2184 GT:DS:GL:BD 0.90293038 1
1 201743356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5670;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201743372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201743468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201743476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7363;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201743840 . GTT G 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7423;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201743872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201743888 . GGT G 78 PASS INDEL;BAVGPOST=0.990;BRSQ=0.634;LDAF=0.0214;AVGPOST=0.9760;RSQ=0.5415;ERATE=0.0066;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201744025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6650;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201744038 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4924;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201744142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4978;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201744205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6217;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201744245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8950;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201744345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8865;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=1935;AN=2184 GT:DS:GL:BD 0.88598901 1
1 201744491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201744526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4658;AVGPOST=0.9896;RSQ=0.9832;ERATE=0.0006;THETA=0.0004;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 201744548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201744574 rs11351668 AG A 5086 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0357;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0002;THETA=0.0019;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 201744663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6060;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201744687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201744765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7025;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201744878 . CAATT C 1303 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201745017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9171;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201745123 . CCATT C 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201745133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8188;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201745205 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201745241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0106;AVGPOST=0.9966;RSQ=0.8926;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201745311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.891;LDAF=0.0517;AVGPOST=0.9890;RSQ=0.9215;ERATE=0.0005;THETA=0.0006;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 201745315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4830;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201745416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0101;AVGPOST=0.9960;RSQ=0.8400;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201745457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3112;ERATE=0.0007;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201745482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.603;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6722;ERATE=0.0005;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201745496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8667;ERATE=0.0004;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201745546 rs72005685 C CAA 4433 PASS INDEL;BAVGPOST=0.705;BRSQ=0.239;LDAF=0.6915;AVGPOST=0.6496;RSQ=0.2867;ERATE=0.0377;THETA=0.0007;AC=1692;AN=2184 GT:DS:GL:BD 0.77472526 1
1 201745583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201745638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0282;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0002;THETA=0.0013;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201745734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1209;AVGPOST=0.9956;RSQ=0.9836;ERATE=0.0006;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 201745774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9069;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201745784 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7807;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201745831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201745983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8266;ERATE=0.0003;THETA=0.0134;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201746017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8142;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201746251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6825;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201746279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6852;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201746319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.7328;ERATE=0.0006;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201746386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.863;LDAF=0.0250;AVGPOST=0.9961;RSQ=0.9371;ERATE=0.0003;THETA=0.0024;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201746405 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201746504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201746508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0666;AVGPOST=0.9977;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 201746539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201746660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.5934;ERATE=0.0012;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201746710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9380;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201746755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8169;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201746768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201746843 . AG A 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6834;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201746865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201746880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201747063 . AC A 25 PASS INDEL;BAVGPOST=0.993;BRSQ=0.121;LDAF=0.0857;AVGPOST=0.8796;RSQ=0.4357;ERATE=0.0035;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 201747173 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5155;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0790;AVGPOST=0.9966;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 201747292 . A AC 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0088;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201747423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2734;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 201747480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5926;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201747886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201747957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0149;AVGPOST=0.9996;RSQ=0.9868;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201747964 . T TG 95 PASS INDEL;BAVGPOST=0.984;BRSQ=0.392;LDAF=0.0157;AVGPOST=0.9842;RSQ=0.5860;ERATE=0.0018;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201748002 . G GGA 24618 PASS INDEL;BAVGPOST=0.964;BRSQ=0.935;LDAF=0.6148;AVGPOST=0.9696;RSQ=0.9570;ERATE=0.0026;THETA=0.0002;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 201748006 rs35466278 A AG 53690 PASS INDEL;BAVGPOST=0.963;BRSQ=0.933;LDAF=0.6219;AVGPOST=0.9719;RSQ=0.9603;ERATE=0.0019;THETA=0.0004;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 201748008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201748593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201748595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201748786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5908;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201748796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201748828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5176;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201748986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7451;AVGPOST=0.9925;RSQ=0.9841;ERATE=0.0013;THETA=0.0004;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 201749067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201749094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7383;AVGPOST=0.9953;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 201749129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201749145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201749279 . CA C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7926;ERATE=0.0005;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201749419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2777;AVGPOST=0.9912;RSQ=0.9826;ERATE=0.0019;THETA=0.0083;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 201749563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9345;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201749626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201749639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201749662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0002;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201749666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0002;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201749933 . CTT C 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201749946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201750044 . GAACT G 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6824;ERATE=0.0004;THETA=0.0080;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201750055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201750144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0152;AVGPOST=0.9969;RSQ=0.9192;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201750213 . C CT 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6646;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201750235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201750372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201750440 . AC A 347 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8954;ERATE=0.0002;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201750464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201750580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9625;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201750605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201750612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0143;AVGPOST=0.9985;RSQ=0.9614;ERATE=0.0003;THETA=0.0107;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201750661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201750667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201750758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201750780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0004;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201750810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9766;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201750944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8363;ERATE=0.0003;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201750994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8745;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201751183 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201751198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201751293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201751311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201751433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9174;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201751495 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7478;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201751507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6843;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201751552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7211;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201751628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7857;ERATE=0.0004;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201751649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201751670 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201751713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1758;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 201751760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201751820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4256;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0009;THETA=0.0006;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 201751982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5075;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 201752056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2503;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 201752062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201752105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2513;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 201752121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0278;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0004;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201752206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0191;AVGPOST=0.9988;RSQ=0.9821;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201752275 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0002;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201752350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201752388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201752389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201752413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6898;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201752611 rs77652580 T TG 102605 PASS INDEL;BAVGPOST=0.995;BRSQ=0.523;LDAF=0.9947;AVGPOST=0.9931;RSQ=0.5127;ERATE=0.0007;THETA=0.0004;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 201752725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201752799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201752800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0011;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 201752818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7576;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201753020 . C CATTT 235 PASS INDEL;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6044;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201753061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2309;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201753075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201753076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5080;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201753079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.920;LDAF=0.0682;AVGPOST=0.9891;RSQ=0.9321;ERATE=0.0007;THETA=0.0007;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 201753165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.6725;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201753201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0097;AVGPOST=0.9982;RSQ=0.9138;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201753233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0052;AVGPOST=0.9976;RSQ=0.8041;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201753234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9038;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201753235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3080;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201753380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6296;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201753589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7727;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201753624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.787;LDAF=0.0234;AVGPOST=0.9920;RSQ=0.8703;ERATE=0.0007;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201753629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0179;AVGPOST=0.9979;RSQ=0.9520;ERATE=0.0006;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201753635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.2184;AVGPOST=0.9766;RSQ=0.9497;ERATE=0.0023;THETA=0.0016;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 201753698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.769;LDAF=0.0138;AVGPOST=0.9935;RSQ=0.8129;ERATE=0.0005;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201753706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.922;LDAF=0.2495;AVGPOST=0.9939;RSQ=0.9880;ERATE=0.0008;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 201753751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2474;AVGPOST=0.9907;RSQ=0.9795;ERATE=0.0022;THETA=0.0015;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 201753800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0077;AVGPOST=0.9958;RSQ=0.8266;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201753867 . GGA G 31088 PASS INDEL;BAVGPOST=0.892;BRSQ=0.432;LDAF=0.8733;AVGPOST=0.8561;RSQ=0.4786;ERATE=0.0181;THETA=0.0004;AC=2008;AN=2184 GT:DS:GL:BD 0.91941392 1
1 201754149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.519;LDAF=0.8705;AVGPOST=0.8519;RSQ=0.4774;ERATE=0.0305;THETA=0.0003;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 201754154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.576;LDAF=0.0066;AVGPOST=0.9940;RSQ=0.6559;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201754177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8462;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201754237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2513;AVGPOST=0.9965;RSQ=0.9928;ERATE=0.0006;THETA=0.0006;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 201754279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.2509;AVGPOST=0.9880;RSQ=0.9770;ERATE=0.0013;THETA=0.0003;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 201754344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9368;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201754565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2573;AVGPOST=0.9883;RSQ=0.9784;ERATE=0.0023;THETA=0.0006;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 201754712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7600;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201754769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0455;AVGPOST=0.9978;RSQ=0.9824;ERATE=0.0006;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 201754868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8137;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201754873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201755120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7530;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201755184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201755187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201755194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201755413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201755414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201755470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2262;AVGPOST=0.9963;RSQ=0.9914;ERATE=0.0009;THETA=0.0028;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 201755632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9099;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201755777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201756068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201756305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6797;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201756505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2125;AVGPOST=0.9969;RSQ=0.9930;ERATE=0.0004;THETA=0.0093;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 201756585 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5341;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201756710 . T TG 186 PASS INDEL;BAVGPOST=0.991;BRSQ=0.690;LDAF=0.0144;AVGPOST=0.9900;RSQ=0.7738;ERATE=0.0011;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201756755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201756976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2591;AVGPOST=0.9821;RSQ=0.9723;ERATE=0.0039;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 201756978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8735;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201756987 . ATG A 130 PASS INDEL;BAVGPOST=0.997;BRSQ=0.612;LDAF=0.0080;AVGPOST=0.9934;RSQ=0.6794;ERATE=0.0015;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201756999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201757007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3108;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0001;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 201757049 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1073;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0001;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 201757106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4495;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201757302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201757361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2099;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 201757530 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5108;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201757678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9106;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201757743 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6296;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201757776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5764;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201757996 . CGT C 123 PASS INDEL;BAVGPOST=0.988;BRSQ=0.585;LDAF=0.0267;AVGPOST=0.9712;RSQ=0.5520;ERATE=0.0081;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201758030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.2975;AVGPOST=0.9669;RSQ=0.9403;ERATE=0.0141;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 201758067 . CTCAAACCCT C 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5416;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201758125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201758175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201758224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3105;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0007;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 201758355 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201758402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201758505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201758679 . G GT 2809 PASS INDEL;BAVGPOST=0.986;BRSQ=0.911;LDAF=0.1008;AVGPOST=0.9503;RSQ=0.7783;ERATE=0.0076;THETA=0.0001;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201758704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201758737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201758758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3128;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 201758838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3128;AVGPOST=0.9931;RSQ=0.9875;ERATE=0.0015;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 201758861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9029;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201758866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8223;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201758869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9179;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201759100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0235;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201759135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9254;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201759137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9801;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201759139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201759243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7123;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201759322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8933;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201759326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0023;AVGPOST=0.9962;RSQ=0.3322;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201759350 . TTG T 14628 PASS INDEL;BAVGPOST=0.955;BRSQ=0.909;LDAF=0.2977;AVGPOST=0.9779;RSQ=0.9637;ERATE=0.0020;THETA=0.0002;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 201759552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7572;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201759625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0675;AVGPOST=0.9983;RSQ=0.9879;ERATE=0.0005;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 201759655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.8157;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201759660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5234;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201759748 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3106;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 201759814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201759884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201759899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0188;AVGPOST=0.9987;RSQ=0.9760;ERATE=0.0003;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201759944 . ATT A 64 PASS INDEL;BAVGPOST=0.996;BRSQ=0.658;LDAF=0.0106;AVGPOST=0.9880;RSQ=0.5770;ERATE=0.0028;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201759946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0091;AVGPOST=0.9963;RSQ=0.8692;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201760081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201760087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7753;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201760136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1081;AVGPOST=0.9967;RSQ=0.9864;ERATE=0.0005;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 201760157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201760297 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201760338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0663;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 201760486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201760495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.9170;AVGPOST=0.9976;RSQ=0.9875;ERATE=0.0008;THETA=0.0003;AC=2005;AN=2184 GT:DS:GL:BD 0.91804028 1
1 201760530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8733;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201760632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0090;AVGPOST=0.9978;RSQ=0.9101;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201760643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201760686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9685;ERATE=0.0003;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201760922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201760943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9173;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 201760956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201760977 . CT C 387 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201760983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9988;RSQ=0.9417;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201761034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201761094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3926;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 201761097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0130;AVGPOST=0.9923;RSQ=0.7662;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201761148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9955;RSQ=0.7274;ERATE=0.0009;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201761156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0180;AVGPOST=0.9986;RSQ=0.9699;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201761165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8283;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201761271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0130;AVGPOST=0.9976;RSQ=0.9249;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201761297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0583;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 201761343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7287;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201761366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201761385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.4944;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201761444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4049;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201761445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1116;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 201761513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.9773;AVGPOST=0.9976;RSQ=0.9586;ERATE=0.0004;THETA=0.0004;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 201761582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201761783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3076;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 201761795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0478;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201762211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0477;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201762251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8643;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201762413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0469;AVGPOST=0.9988;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201762541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0085;AVGPOST=0.9962;RSQ=0.8213;ERATE=0.0007;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201762611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201762661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9981;RSQ=0.9707;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201762789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4728;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201763051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.7496;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201763119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201763132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201763145 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201763238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4851;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201763242 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9967;RSQ=0.4658;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201763320 . G GACAT 2061 PASS INDEL;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1531;AVGPOST=0.9795;RSQ=0.9385;ERATE=0.0018;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 201763339 . T TAC 10742 PASS INDEL;BAVGPOST=0.965;BRSQ=0.876;LDAF=0.2086;AVGPOST=0.8797;RSQ=0.7170;ERATE=0.0227;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 201763347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201763469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201763667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6362;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201763677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8552;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201763685 . T TA 10483 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0479;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201763705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0534;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 201763777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.9111;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201763822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201763839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8746;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201763848 . CTT C 1152 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201763972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201764060 . TG T 1570 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.9021;ERATE=0.0005;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201764123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201764133 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201764205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0144;AVGPOST=0.9991;RSQ=0.9696;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201764337 . TA T 998 PASS INDEL;BAVGPOST=0.994;BRSQ=0.692;LDAF=0.0127;AVGPOST=0.9958;RSQ=0.8735;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201764345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0476;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201764358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0477;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201764393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201764403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201764417 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9779;AVGPOST=0.9992;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 201764444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201764487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9372;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201764504 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0085;AVGPOST=0.9895;RSQ=0.5269;ERATE=0.0013;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201764565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0105;AVGPOST=0.9970;RSQ=0.8914;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201764566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1368;AVGPOST=0.9893;RSQ=0.9706;ERATE=0.0016;THETA=0.0002;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 201764573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9851;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201764838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6514;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201764872 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7715;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201764890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201765002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3077;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 201765172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201765268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201765383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7768;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201765526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201765636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201765678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0478;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201765781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0476;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 201765918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0481;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 201765993 . G GT 33 PASS INDEL;BAVGPOST=0.994;BRSQ=0.567;LDAF=0.0097;AVGPOST=0.9887;RSQ=0.5491;ERATE=0.0027;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201766006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1528;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 201766050 . TG T 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0039;AVGPOST=0.9932;RSQ=0.3864;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201766161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 201766285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201766357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201766507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2761;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0002;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 201766522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201766738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201766758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201766789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4693;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201766891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0492;AVGPOST=0.9979;RSQ=0.9831;ERATE=0.0004;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201766907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6590;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201767072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0468;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201767083 . C CAG 66 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0046;AVGPOST=0.9938;RSQ=0.4399;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201767104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201767208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201767288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8363;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201767444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0015;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201767520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201767567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9021;ERATE=0.0003;THETA=0.0043;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201767676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7327;ERATE=0.0006;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201767706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0394;AVGPOST=0.9989;RSQ=0.9893;ERATE=0.0004;THETA=0.0012;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201767721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1086;AVGPOST=0.9965;RSQ=0.9863;ERATE=0.0005;THETA=0.0113;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 201767737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7691;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201767762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8728;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201767808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8566;ERATE=0.0003;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201767856 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5546;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201767971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.454;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5228;ERATE=0.0007;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201768036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768256 . C CATTT 25727 PASS INDEL;BAVGPOST=0.982;BRSQ=0.952;LDAF=0.1669;AVGPOST=0.9796;RSQ=0.9551;ERATE=0.0004;THETA=0.0013;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 201768257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0003;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.666;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7304;ERATE=0.0003;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201768291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1081;AVGPOST=0.9917;RSQ=0.9688;ERATE=0.0007;THETA=0.0045;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 201768336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0278;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8823;ERATE=0.0004;THETA=0.0157;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201768414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0095;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201768463 . CTG C 42 PASS INDEL;BAVGPOST=0.998;BRSQ=0.621;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6384;ERATE=0.0003;THETA=0.0181;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201768470 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9861;ERATE=0.0003;THETA=0.0228;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201768635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0099;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201768710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5825;ERATE=0.0004;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201768958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9497;ERATE=0.0003;THETA=0.0141;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201768978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7886;ERATE=0.0006;THETA=0.0231;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201769182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6854;ERATE=0.0012;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201769207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8286;ERATE=0.0004;THETA=0.0307;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201769271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6404;ERATE=0.0005;THETA=0.0080;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201769294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0123;AVGPOST=0.9983;RSQ=0.9465;ERATE=0.0005;THETA=0.0102;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201769399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8558;ERATE=0.0003;THETA=0.0042;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201769521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.872;LDAF=0.1250;AVGPOST=0.9558;RSQ=0.8579;ERATE=0.0037;THETA=0.0208;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 201769686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0051;AVGPOST=0.9958;RSQ=0.6784;ERATE=0.0006;THETA=0.0309;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201769790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5686;ERATE=0.0008;THETA=0.0133;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201769844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.929;LDAF=0.1398;AVGPOST=0.9767;RSQ=0.9270;ERATE=0.0012;THETA=0.0109;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 201769900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1029;AVGPOST=0.9885;RSQ=0.9558;ERATE=0.0004;THETA=0.0175;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 201769915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0183;AVGPOST=0.9984;RSQ=0.9701;ERATE=0.0003;THETA=0.0096;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201769971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201769978 rs35170653 A ATC 2458 PASS INDEL;BAVGPOST=0.976;BRSQ=0.892;LDAF=0.1344;AVGPOST=0.9760;RSQ=0.9256;ERATE=0.0004;THETA=0.0029;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 201769997 . C CTTT 8335 PASS INDEL;BAVGPOST=0.977;BRSQ=0.899;LDAF=0.1330;AVGPOST=0.9764;RSQ=0.9273;ERATE=0.0003;THETA=0.0162;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 201770001 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1528;AVGPOST=0.9942;RSQ=0.9832;ERATE=0.0004;THETA=0.0017;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 201770020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0349;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0004;THETA=0.0020;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201770116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1414;AVGPOST=0.9963;RSQ=0.9885;ERATE=0.0005;THETA=0.0021;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 201770168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9677;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201770176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201770208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8626;ERATE=0.0004;THETA=0.0063;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201770232 . AC A 9360 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1071;AVGPOST=0.9952;RSQ=0.9823;ERATE=0.0005;THETA=0.0033;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 201770314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9359;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201770399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4497;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 201770503 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6382;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201770552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8876;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201770565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201770619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1048;AVGPOST=0.9978;RSQ=0.9919;ERATE=0.0003;THETA=0.0026;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 201770652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201770667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201770745 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201770746 . C CT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8147;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201770760 . TGAG T 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201770817 . GGAGA G 688 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8469;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201770820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9772;ERATE=0.0003;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201770854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201770859 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201770875 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9268;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201771021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1041;AVGPOST=0.9976;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 201771134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3150;AVGPOST=0.9974;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 201771137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3382;ERATE=0.0007;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201771382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7144;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201771406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.6130;AVGPOST=0.9910;RSQ=0.9853;ERATE=0.0008;THETA=0.0004;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 201771585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.6111;AVGPOST=0.9881;RSQ=0.9811;ERATE=0.0006;THETA=0.0004;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 201771617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4335;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201771620 rs10699586 A ATTC 26044 PASS INDEL;BAVGPOST=0.953;BRSQ=0.891;LDAF=0.2847;AVGPOST=0.9703;RSQ=0.9462;ERATE=0.0006;THETA=0.0005;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 201771632 rs67626011 A ATCT 22596 PASS INDEL;BAVGPOST=0.952;BRSQ=0.890;LDAF=0.2855;AVGPOST=0.9665;RSQ=0.9398;ERATE=0.0013;THETA=0.0010;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 201771633 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5672;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201771714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201771794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201771808 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0856;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0008;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 201771824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201771891 . CGCTT C 421 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.7852;ERATE=0.0008;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201771953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1228;AVGPOST=0.9967;RSQ=0.9882;ERATE=0.0005;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 201771954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.743;LDAF=0.1402;AVGPOST=0.9521;RSQ=0.8642;ERATE=0.0015;THETA=0.0004;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 201772039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.732;LDAF=0.1507;AVGPOST=0.9448;RSQ=0.8535;ERATE=0.0009;THETA=0.0009;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 201772048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.608;LDAF=0.0119;AVGPOST=0.9881;RSQ=0.5706;ERATE=0.0013;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201772079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.2675;ERATE=0.0009;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201772097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.656;LDAF=0.0136;AVGPOST=0.9965;RSQ=0.8959;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201772110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.1796;AVGPOST=0.9831;RSQ=0.9574;ERATE=0.0025;THETA=0.0004;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 201772118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.748;LDAF=0.2945;AVGPOST=0.8701;RSQ=0.7777;ERATE=0.0269;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 201772154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201772226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201772245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0163;AVGPOST=0.9990;RSQ=0.9777;ERATE=0.0002;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201772258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201772285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9204;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201772389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201772423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201772464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1371;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 201772519 . A AAGGC 1141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201772560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1372;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 201772589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201772706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201772709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0740;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 201772749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201772905 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201772933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9868;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201773010 . C CA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6944;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201773056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201773074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201773287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201773355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201773601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9705;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201773843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201773970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201773991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201774005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201774066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201774067 . TA T 2984 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0338;AVGPOST=0.9979;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 201774130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8560;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201774147 . TTTTG T 502 PASS INDEL;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0063;AVGPOST=0.9962;RSQ=0.7446;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201774188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8077;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201774242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6409;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201774278 . TC T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201774291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201774324 . GATGTGAGAA G 3776 PASS INDEL;BAVGPOST=0.993;BRSQ=0.914;LDAF=0.0238;AVGPOST=0.9954;RSQ=0.9177;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201774361 . T TA 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4600;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201774371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6540;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201774708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1369;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 201774720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201774727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8228;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201774761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1386;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 201774815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201774922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5207;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201775029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6567;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201775292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4487;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201775427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4213;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201775443 . T TCA 29 PASS INDEL;BAVGPOST=0.997;BRSQ=0.670;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.6918;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201775601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201775623 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201775687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201775704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201775705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0691;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 201775755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201775856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201775891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.5197;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201775917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6234;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201775969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201776342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0691;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 201776364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6605;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201776690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5081;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201776823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6253;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201776954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201777180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2509;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 201777227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201777246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3531;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0012;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 201777449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7749;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201777460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777471 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0966;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 201777473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777510 . A AC 526 PASS INDEL;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.9033;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201777525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201777619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7287;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201777647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0103;AVGPOST=0.9987;RSQ=0.9424;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201777703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201777708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0599;AVGPOST=0.9982;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 201777745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201777762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7270;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201777846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201777969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1157;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 201778121 rs72190735 ATC A 8137 PASS INDEL;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0962;AVGPOST=0.9964;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 201778234 rs61649121 CTT C 619 PASS INDEL;BAVGPOST=0.983;BRSQ=0.893;LDAF=0.0862;AVGPOST=0.9881;RSQ=0.9457;ERATE=0.0008;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 201778242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201778278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201778500 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5122;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201778528 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201778753 . C CA 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201778794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201778908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.6185;AVGPOST=0.9885;RSQ=0.9841;ERATE=0.0007;THETA=0.0005;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 201778909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7963;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201779270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201779302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201779403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.3069;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201779777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6841;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201779805 . GA G 160 PASS INDEL;BAVGPOST=0.994;BRSQ=0.598;LDAF=0.0072;AVGPOST=0.9931;RSQ=0.6160;ERATE=0.0012;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201779832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201780003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201780032 . G GCC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201780148 . G GCT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201780149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0051;AVGPOST=0.9951;RSQ=0.6702;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201780393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9119;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201780542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201780573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201780584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201780676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2552;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0012;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 201780892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8667;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201780921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2552;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0018;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 201780983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8115;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201781033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201781041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8872;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201781045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2290;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 201781059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201781080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0250;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201781155 . AAGG A 485 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8315;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201781239 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8545;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201781293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7617;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201781462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201781507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5655;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201781564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201781806 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8335;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201781953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201782110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1098;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201782189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201782220 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6565;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201782546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201782567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201782728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6261;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201782757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3268;AVGPOST=0.9936;RSQ=0.9904;ERATE=0.0008;THETA=0.0004;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 201782761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201782857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201782872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9252;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201782884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 201782969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0699;AVGPOST=0.9982;RSQ=0.9899;ERATE=0.0005;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 201783032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201783076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201783146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7489;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201783193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6111;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201783266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201783387 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6073;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201783422 . G GA 38 PASS INDEL;BAVGPOST=0.993;BRSQ=0.566;LDAF=0.0208;AVGPOST=0.9742;RSQ=0.5323;ERATE=0.0050;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201783426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201783444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0242;AVGPOST=0.9988;RSQ=0.9790;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201783506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201783647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5010;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201783784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2370;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0005;THETA=0.0008;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 201783815 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201783963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8128;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201783996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4328;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9058;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201784233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4515;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784313 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6242;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4570;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0628;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0004;THETA=0.0027;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 201784633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784686 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201784695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8523;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201784784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9328;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201784842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201784967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201785051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201785237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201785472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201785577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201785906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201785913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201785914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6503;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201785945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1233;AVGPOST=0.9970;RSQ=0.9889;ERATE=0.0004;THETA=0.0005;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 201786168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5972;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201786319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7619;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201786504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9357;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201786525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.2372;AVGPOST=0.9940;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 201786894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8809;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201786981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.916;LDAF=0.0222;AVGPOST=0.9970;RSQ=0.9449;ERATE=0.0005;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201787061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6746;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201787170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6719;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201787223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0122;AVGPOST=0.9979;RSQ=0.9353;ERATE=0.0003;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201787363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0080;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201787439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201787495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201787496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7957;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201787533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9698;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201787584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201787595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201787619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201787662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201787693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9664;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201787711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201787729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201787757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0253;AVGPOST=0.9983;RSQ=0.9725;ERATE=0.0003;THETA=0.0019;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201787833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7248;AVGPOST=0.9950;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 201787961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7883;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0003;THETA=0.0020;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 201787977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201788051 . AT A 657 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9182;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201788068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201788103 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6328;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201788110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201788233 . G GCAA 2216 PASS INDEL;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0133;AVGPOST=0.9978;RSQ=0.9350;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201788237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9640;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201788247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201788321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201788345 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0224;AVGPOST=0.9984;RSQ=0.9771;ERATE=0.0004;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201788406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201788534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9441;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201788755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201788780 . AAAG A 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201788888 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201788924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201789002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201789241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201789264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5419;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 201789267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9688;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201789272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5792;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201789371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201789372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5892;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789401 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0110;AVGPOST=0.9982;RSQ=0.9270;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201789462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201789522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8020;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0006;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201789556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5390;AVGPOST=0.9973;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201789591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201789620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6849;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789650 . CAT C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201789739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201789749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7796;AVGPOST=0.9968;RSQ=0.9925;ERATE=0.0006;THETA=0.0006;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 201789856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8550;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201789915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201790020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0777;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 201790042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201790131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201790212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7031;ERATE=0.0005;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201790318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201790353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1305;AVGPOST=0.9968;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 201790421 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201790446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0309;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201790453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0092;AVGPOST=0.9987;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201790556 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201790652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201790717 . GGA G 316 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0057;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201790782 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201790814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201790967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9245;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201791214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5487;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 201791248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0100;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201791277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201791363 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9841;ERATE=0.0003;THETA=0.0020;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201791392 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201791546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201791685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4427;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9461;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201791826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201791854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201791950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7784;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201791959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0464;AVGPOST=0.9986;RSQ=0.9885;ERATE=0.0004;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 201792110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.7848;AVGPOST=0.9946;RSQ=0.9883;ERATE=0.0009;THETA=0.0005;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 201792186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201792247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7275;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 201792385 rs35779868 TTC T 37746 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4837;AVGPOST=0.9926;RSQ=0.9886;ERATE=0.0011;THETA=0.0005;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 201792483 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201792540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201792706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201792781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201792853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8054;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201792957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0100;AVGPOST=0.9971;RSQ=0.9059;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201792994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0071;AVGPOST=0.9981;RSQ=0.9013;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201793019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4830;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 201793103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4781;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0005;THETA=0.0006;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 201793243 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201793448 . TA T 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6317;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201793464 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0613;AVGPOST=0.9974;RSQ=0.9818;ERATE=0.0005;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201793657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2754;AVGPOST=0.9957;RSQ=0.9919;ERATE=0.0007;THETA=0.0007;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 201793667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.683;LDAF=0.0104;AVGPOST=0.9910;RSQ=0.6822;ERATE=0.0019;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201793722 . A AT 1023 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0228;AVGPOST=0.9979;RSQ=0.9603;ERATE=0.0006;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201793818 . AGATT A 328 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201793971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5787;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201794003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7969;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201794078 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4378;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201794109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7009;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201794118 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0030;AVGPOST=0.9954;RSQ=0.4772;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201794287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8271;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201794299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5110;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201794322 . TA T 175 PASS INDEL;BAVGPOST=0.992;BRSQ=0.514;LDAF=0.0191;AVGPOST=0.9830;RSQ=0.6658;ERATE=0.0014;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201794400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201794517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201794684 . TA T 1857 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0146;AVGPOST=0.9981;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201794737 . GT G 1307 PASS INDEL;BAVGPOST=0.985;BRSQ=0.833;LDAF=0.0457;AVGPOST=0.9950;RSQ=0.9523;ERATE=0.0006;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 201794902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9953;RSQ=0.7456;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201795007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.509;LDAF=0.1068;AVGPOST=0.9142;RSQ=0.6615;ERATE=0.0047;THETA=0.0009;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 201795356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.769;BRSQ=0.577;LDAF=0.3892;AVGPOST=0.8107;RSQ=0.6793;ERATE=0.0087;THETA=0.0003;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 201795358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.237;LDAF=0.0357;AVGPOST=0.9576;RSQ=0.5067;ERATE=0.0032;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201795388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.174;LDAF=0.0513;AVGPOST=0.9240;RSQ=0.3906;ERATE=0.0059;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201795743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.823;BRSQ=0.128;LDAF=0.1915;AVGPOST=0.7503;RSQ=0.3703;ERATE=0.0097;THETA=0.0006;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 201795964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.776;LDAF=0.4650;AVGPOST=0.8431;RSQ=0.7478;ERATE=0.0141;THETA=0.0004;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 201796214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.342;LDAF=0.0177;AVGPOST=0.9844;RSQ=0.6845;ERATE=0.0009;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201796265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.874;LDAF=0.0839;AVGPOST=0.9859;RSQ=0.9335;ERATE=0.0016;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201796331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6002;ERATE=0.0008;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201796609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.694;LDAF=0.0217;AVGPOST=0.9809;RSQ=0.6202;ERATE=0.0012;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201796611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6300;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201796768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0063;AVGPOST=0.9921;RSQ=0.5270;ERATE=0.0012;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201796793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6493;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201796805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0149;AVGPOST=0.9954;RSQ=0.8794;ERATE=0.0008;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201796815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3386;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201796830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0035;AVGPOST=0.9956;RSQ=0.4363;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201796905 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201797030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4569;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 201797044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6048;ERATE=0.0014;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201797082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4571;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 201797316 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7952;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201797338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0883;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201797358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9120;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201797514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201797713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8535;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201797718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0476;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 201797734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6400;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0883;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201797772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0397;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0004;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201797803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0879;AVGPOST=0.9985;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201797828 . CG C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9286;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201797879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6016;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201797924 . GT G 27 PASS INDEL;BAVGPOST=0.969;BRSQ=0.068;LDAF=0.0651;AVGPOST=0.9046;RSQ=0.3713;ERATE=0.0045;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201797939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201797952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5192;AVGPOST=0.9952;RSQ=0.9931;ERATE=0.0008;THETA=0.0007;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 201798036 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201798061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7625;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201798087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8295;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201798143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0887;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201798181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201798243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0889;AVGPOST=0.9988;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201798275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3821;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 201798288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7030;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201798346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6419;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201798360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201798372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201798538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6508;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201798762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4734;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201798763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6502;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201798934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201798942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0884;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201799048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9212;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201799119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5215;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0006;THETA=0.0003;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 201799156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5180;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0009;THETA=0.0005;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 201799231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201799239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201799251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201799302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0120;AVGPOST=0.9977;RSQ=0.9285;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201799361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201799397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201799448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8656;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201799455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5184;AVGPOST=0.9971;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 201799496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201799516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201799591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9231;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201799600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201799765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0261;AVGPOST=0.9942;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201799778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201799844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8090;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201799873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9399;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201799874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201799923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201800063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6895;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3819;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 201800188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3820;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 201800211 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7665;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201800233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800308 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201800315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6237;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9262;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201800445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800519 rs34905261 AATCT A 79368 PASS INDEL;BAVGPOST=0.975;BRSQ=0.960;LDAF=0.7178;AVGPOST=0.9721;RSQ=0.9529;ERATE=0.0012;THETA=0.0008;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 201800568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0886;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201800615 . TTC T 614 PASS INDEL;BAVGPOST=0.989;BRSQ=0.934;LDAF=0.0874;AVGPOST=0.9972;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201800679 . TCTC T 10128 PASS INDEL;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0896;AVGPOST=0.9966;RSQ=0.9844;ERATE=0.0005;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 201800680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0891;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0004;THETA=0.0009;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 201800724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7347;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201800743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8843;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201800744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5407;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201800791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201800837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201801025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201801066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8989;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201801093 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8967;ERATE=0.0004;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201801137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5219;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 201801166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201801215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0883;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201801262 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0882;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201801323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8886;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201801388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0878;AVGPOST=0.9987;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201801548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201801609 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201801618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0884;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201801621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201801696 . CA C 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5224;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201801735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0885;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0011;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 201801820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201802073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9556;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201802141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4652;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201802162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0948;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 201802179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201802194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201802203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201802214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.415;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4626;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201802312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201802691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0098;AVGPOST=0.9994;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201802800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201802830 . AC A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5374;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201802896 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201802962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0079;AVGPOST=0.9983;RSQ=0.9102;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201803056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5772;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 201803112 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9220;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201803141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9487;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201803167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201803198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6208;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201803204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201803385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9054;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201803495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6659;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201803541 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5771;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201803604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8819;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201803631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1771;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 201803691 rs72217938 CAT C 17572 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1765;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 201803845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8748;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201803905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201803919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0074;AVGPOST=0.9955;RSQ=0.7571;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201803925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4551;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201803988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6066;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201804050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4592;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201804053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7636;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201804054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201804156 . TAAG T 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4503;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201804159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0180;AVGPOST=0.9980;RSQ=0.9580;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201804179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5754;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201804248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0144;AVGPOST=0.9966;RSQ=0.9156;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201804292 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0982;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 201804328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201804408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5761;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 201804741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8576;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201804764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201804829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201804894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0517;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201805008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3996;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 201805061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201805064 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201805083 . GTATTT G 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8280;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201805171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1763;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 201805276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.7704;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201805471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201805479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201805487 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7306;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201805527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201805611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8217;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201805627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201805866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201805925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201805987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201806199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201806242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201806245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201806289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201806325 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0429;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201806370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201806377 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4047;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0027;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 201806445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201806546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201806581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201806617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 201806704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201806705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201806776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201806854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201806866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201806882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201806883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201806908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201806942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0263;AVGPOST=0.9986;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201807116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0434;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 201807186 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201807295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201807416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0002;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201807448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9671;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201807476 . CCTAA C 488 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.7922;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201807499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201807554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201807572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9417;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201807606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201807659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0138;AVGPOST=0.9975;RSQ=0.9315;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201807702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201807772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201807786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9391;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201807857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8790;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201807869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201807877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9088;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201807878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201807911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3056;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 201807933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1442;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 201807957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0280;AVGPOST=0.9990;RSQ=0.9856;ERATE=0.0007;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201807976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201808044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0042;AVGPOST=0.9962;RSQ=0.6625;ERATE=0.0011;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201808123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8599;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201808133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201808235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0061;AVGPOST=0.9952;RSQ=0.6831;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201808416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0125;AVGPOST=0.9982;RSQ=0.9445;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201808474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0241;AVGPOST=0.9975;RSQ=0.9667;ERATE=0.0004;THETA=0.0061;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201808541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0299;AVGPOST=0.9984;RSQ=0.9782;ERATE=0.0004;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201808544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0880;AVGPOST=0.9955;RSQ=0.9809;ERATE=0.0005;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201808657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.4947;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201808663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0296;AVGPOST=0.9964;RSQ=0.9528;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 201808699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201808796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9468;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201808823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808906 . AG A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4827;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201808995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201809036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201809055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0231;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201809144 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201809243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2964;AVGPOST=0.9895;RSQ=0.9791;ERATE=0.0012;THETA=0.0003;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 201809252 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201809284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201809393 . A AG 172 PASS INDEL;BAVGPOST=0.998;BRSQ=0.610;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4067;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201809495 . TC T 502 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8924;ERATE=0.0003;THETA=0.0034;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201809547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3685;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 201809646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201809688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6442;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201809922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1392;AVGPOST=0.9968;RSQ=0.9920;ERATE=0.0005;THETA=0.0005;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 201809956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6446;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201809963 . TAAAG T 3175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201810040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0761;AVGPOST=0.9980;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 201810044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0356;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201810154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6430;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201810157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.701;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8570;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201810170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8040;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201810182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5058;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201810225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.961;LDAF=0.1181;AVGPOST=0.9942;RSQ=0.9828;ERATE=0.0004;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 201810272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9185;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201810281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0169;AVGPOST=0.9981;RSQ=0.9473;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201810336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5379;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201810378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0108;AVGPOST=0.9963;RSQ=0.8719;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201810385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201810424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0004;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201810880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201810902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201810903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7949;AVGPOST=0.9975;RSQ=0.9938;ERATE=0.0005;THETA=0.0006;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 201811047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0284;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201811188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8614;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201811199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201811212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201811265 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201811303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3793;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0005;THETA=0.0001;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 201811318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0286;AVGPOST=0.9981;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201811353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7700;ERATE=0.0002;THETA=0.0038;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201811590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1118;AVGPOST=0.9961;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 201811610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0882;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 201811770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201811899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0038;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201811964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201812025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201812087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201812216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201812243 . A AGG 1621 PASS INDEL;BAVGPOST=0.970;BRSQ=0.792;LDAF=0.0824;AVGPOST=0.9725;RSQ=0.8745;ERATE=0.0007;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 201812260 rs72049095 A AGG 5041 PASS INDEL;BAVGPOST=0.975;BRSQ=0.856;LDAF=0.0927;AVGPOST=0.9819;RSQ=0.9236;ERATE=0.0008;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 201812261 rs112308734 G GAAA 2240 PASS INDEL;BAVGPOST=0.978;BRSQ=0.888;LDAF=0.1023;AVGPOST=0.9879;RSQ=0.9530;ERATE=0.0006;THETA=0.0007;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 201812265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9136;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201812349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201812365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201812391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0182;AVGPOST=0.9992;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201812511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0363;AVGPOST=0.9987;RSQ=0.9834;ERATE=0.0004;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201812656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5480;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201812671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201812697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7165;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201812737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5810;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201812890 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7840;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201813168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6737;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201813187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201813196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201813284 . AT A 197 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0098;AVGPOST=0.9934;RSQ=0.7362;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201813359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8920;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201813421 . CTATTT C 258 PASS INDEL;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0059;AVGPOST=0.9958;RSQ=0.7341;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201813425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5065;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201813427 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201813460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0406;AVGPOST=0.9984;RSQ=0.9856;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 201813529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201813642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201813645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201813851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0305;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0029;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201813887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0288;AVGPOST=0.9982;RSQ=0.9763;ERATE=0.0003;THETA=0.0015;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 201814140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0142;AVGPOST=0.9956;RSQ=0.8817;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201814284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8328;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201814474 rs71661642 TATTG T 2963 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9978;RSQ=0.9535;ERATE=0.0006;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201814599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0403;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201814675 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7362;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201814743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2754;AVGPOST=0.9915;RSQ=0.9847;ERATE=0.0021;THETA=0.0004;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 201814791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5023;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201814837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5709;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201814867 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4262;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201814870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201814881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0139;AVGPOST=0.9968;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201814884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201814930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201815242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8120;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201815298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201815352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9662;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201815503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201815574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9077;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201815661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0390;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201815671 . T TGTA 484 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201815904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 201815954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201815958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201816019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 201816029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201816095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7799;AVGPOST=0.9947;RSQ=0.9883;ERATE=0.0006;THETA=0.0007;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 201816100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0396;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0022;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201816249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9386;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201816299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5377;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201816348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201816370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9872;ERATE=0.0002;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201816394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9974;RSQ=0.9610;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201816397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4656;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201816500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0204;AVGPOST=0.9969;RSQ=0.9450;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201816702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9208;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201816749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8942;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201816849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5691;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201816867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0296;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201816933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7756;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201817033 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3987;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201817154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201817247 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201817426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201817488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7752;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201817764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201817925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201817943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201817980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201818017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0073;AVGPOST=0.9994;RSQ=0.9729;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201818124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0785;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0002;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 201818344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0789;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 201818721 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201818835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4618;AVGPOST=0.9915;RSQ=0.9894;ERATE=0.0011;THETA=0.0004;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 201818913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9550;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201818933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201818951 . T TC 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8088;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201818961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7838;AVGPOST=0.9970;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 201818969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0790;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201819101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0794;AVGPOST=0.9984;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201819174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201819210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0790;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 201819211 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201819296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0338;AVGPOST=0.9971;RSQ=0.9665;ERATE=0.0005;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 201819366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9246;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201819444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5412;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8872;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201819553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6132;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819671 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201819795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201819861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0801;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0002;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 201820081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201820130 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201820326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201820409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5010;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 201820470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.7868;AVGPOST=0.9975;RSQ=0.9939;ERATE=0.0015;THETA=0.0002;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 201820573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201820787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7887;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201820804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201820817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201820996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8764;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201821147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1431;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 201821239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6446;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0020;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 201821330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201821386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201821396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6482;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 201821609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201821630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201821636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7783;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201821753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201821924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.8051;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201821972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7912;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 201822245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8770;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201822347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9658;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201822367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9195;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201822513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5890;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201822682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0119;AVGPOST=0.9984;RSQ=0.9533;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201822706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1383;AVGPOST=0.9977;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 201822717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9991;RSQ=0.9606;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201822828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201822866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201822874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8317;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201822887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3503;AVGPOST=0.9952;RSQ=0.9922;ERATE=0.0015;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 201822996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823056 . ATC A 1102 PASS INDEL;BAVGPOST=0.985;BRSQ=0.773;LDAF=0.0467;AVGPOST=0.9606;RSQ=0.6438;ERATE=0.0180;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201823077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1452;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 201823162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201823254 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9484;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201823275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7588;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201823403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0205;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0001;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201823487 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201823815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201823906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9189;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201823997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201824017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201824062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201824183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9129;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201824295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201824422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9986;RSQ=0.9514;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201824458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0098;AVGPOST=0.9990;RSQ=0.9589;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201824473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201824500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5634;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 201824508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5543;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201824568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5986;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201824630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5942;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201824659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201824700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 201824716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201824804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201824856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8858;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201824870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201824917 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201825070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1095;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 201825266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825267 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9367;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201825317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9393;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201825409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3160;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 201825550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201825574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8887;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201825611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201825644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9226;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201825691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7576;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201825767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5627;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0006;THETA=0.0005;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 201825817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3154;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 201825832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201825923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8686;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201826121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9289;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201826142 . TA T 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4971;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9530;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201826488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3789;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201826627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 201826668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 201826716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8793;ERATE=0.0003;THETA=0.0025;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201826876 rs5779146 CAT C 14235 PASS INDEL;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1068;AVGPOST=0.9880;RSQ=0.9531;ERATE=0.0021;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 201826917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201826995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9057;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201827000 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201827007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6606;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201827016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9192;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201827105 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9708;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201827125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8196;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201827250 . T TA 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5172;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201827339 . G GAGTT 2710 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9343;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201827346 . A AG 42 PASS INDEL;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0092;AVGPOST=0.9970;RSQ=0.8768;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201827351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0637;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0004;THETA=0.0011;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 201827440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201827585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9744;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201827745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201827771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201827908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2851;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 201828018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2881;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0009;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 201828076 . TTTTTAA T 1932 PASS INDEL;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0220;AVGPOST=0.9961;RSQ=0.9219;ERATE=0.0006;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201828290 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6014;AVGPOST=0.9955;RSQ=0.9935;ERATE=0.0006;THETA=0.0002;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 201828419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2890;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 201828426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5136;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201828487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0207;AVGPOST=0.9984;RSQ=0.9642;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201828521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201828540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201828558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201828575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0752;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 201828583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3108;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 201828602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7765;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201828646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201828812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201828848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201828929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201829025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2883;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 201829084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7139;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 201829111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7832;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201829185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5989;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 201829208 . TCTG T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6289;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201829218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201829232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7504;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201829257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6091;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201829298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201829458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201829544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7245;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1584;AN=2184 GT:DS:GL:BD 0.72527474 1
1 201829595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201829704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6343;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829745 . AG A 11241 PASS INDEL;BAVGPOST=0.916;BRSQ=0.831;LDAF=0.6492;AVGPOST=0.8613;RSQ=0.7796;ERATE=0.0399;THETA=0.0002;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 201829811 rs77586377 GA G 75515 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.7464;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=1631;AN=2184 GT:DS:GL:BD 0.74679488 1
1 201829812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201829869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3101;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0010;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 201830051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201830053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9018;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201830144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201830182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201830285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7475;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 201830316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201830424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9422;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201830604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201830682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201830799 . TGG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201830855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.878;LDAF=0.5936;AVGPOST=0.8989;RSQ=0.8530;ERATE=0.0136;THETA=0.0010;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 201830998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0037;AVGPOST=0.9938;RSQ=0.3310;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201831052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7645;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201831185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201831217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201831257 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1572;AVGPOST=0.9939;RSQ=0.9828;ERATE=0.0004;THETA=0.0009;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 201831272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6218;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6542;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831441 . TAAG T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831480 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8838;ERATE=0.0006;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201831490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201831597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201831611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8534;ERATE=0.0005;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201831660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8207;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201831755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5011;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.0918;AVGPOST=0.9908;RSQ=0.9598;ERATE=0.0003;THETA=0.0018;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 201831862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4603;ERATE=0.0005;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201831930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7408;ERATE=0.0005;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201831955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7384;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201831963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0122;AVGPOST=0.9979;RSQ=0.9221;ERATE=0.0006;THETA=0.0055;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201831980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4553;ERATE=0.0006;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201832010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0052;AVGPOST=0.9967;RSQ=0.7035;ERATE=0.0017;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201832140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.8359;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201832145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.939;LDAF=0.3405;AVGPOST=0.9807;RSQ=0.9684;ERATE=0.0009;THETA=0.0006;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 201832152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201832218 . AG A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201832309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201832385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7842;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201832476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9765;ERATE=0.0003;THETA=0.0053;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201832547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1121;AVGPOST=0.9968;RSQ=0.9902;ERATE=0.0005;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 201832895 . A AT 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5028;ERATE=0.0016;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201832920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201833081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0166;AVGPOST=0.9989;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201833088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201833194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9593;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201833317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3451;AVGPOST=0.9924;RSQ=0.9886;ERATE=0.0011;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 201833366 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201833495 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9521;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201833521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201833547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8765;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201833706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201833930 . T TA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201834040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1120;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 201834094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201834131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7755;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201834132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0693;AVGPOST=0.9979;RSQ=0.9897;ERATE=0.0004;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 201834295 . GA G 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6658;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201834327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201834334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7229;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201834404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201834733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201834993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835107 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201835348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201835441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3556;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 201835559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201835573 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0071;AVGPOST=0.9978;RSQ=0.8886;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201835651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201835668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0170;AVGPOST=0.9989;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201835875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201835929 . CT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6636;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201836091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201836159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9091;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201836398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201836522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201836586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201836635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7537;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201836746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8092;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201836763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3494;AVGPOST=0.9958;RSQ=0.9926;ERATE=0.0009;THETA=0.0007;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 201836873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5224;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201836964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201837034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0380;AVGPOST=0.9977;RSQ=0.9782;ERATE=0.0004;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201837035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201837046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.728;LDAF=0.0663;AVGPOST=0.9600;RSQ=0.7820;ERATE=0.0034;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 201837871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.778;LDAF=0.0405;AVGPOST=0.9858;RSQ=0.8923;ERATE=0.0005;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 201837877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.856;LDAF=0.0399;AVGPOST=0.9814;RSQ=0.8122;ERATE=0.0031;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 201839054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4694;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201839055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.759;LDAF=0.0350;AVGPOST=0.9748;RSQ=0.7479;ERATE=0.0009;THETA=0.0016;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201839091 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.763;LDAF=0.0369;AVGPOST=0.9816;RSQ=0.8208;ERATE=0.0006;THETA=0.0044;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 201839107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.926;LDAF=0.0621;AVGPOST=0.9892;RSQ=0.9401;ERATE=0.0006;THETA=0.0051;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 201839158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201839193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6245;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201839202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0098;AVGPOST=0.9898;RSQ=0.5569;ERATE=0.0008;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201839230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.824;LDAF=0.1786;AVGPOST=0.9096;RSQ=0.7971;ERATE=0.0116;THETA=0.0017;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 201839373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.892;LDAF=0.1132;AVGPOST=0.9745;RSQ=0.9274;ERATE=0.0004;THETA=0.0008;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 201839374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.893;LDAF=0.1131;AVGPOST=0.9766;RSQ=0.9318;ERATE=0.0005;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 201839376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.679;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.5589;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201839384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0064;AVGPOST=0.9933;RSQ=0.5825;ERATE=0.0011;THETA=0.0047;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201839390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.781;LDAF=0.0816;AVGPOST=0.9536;RSQ=0.7956;ERATE=0.0066;THETA=0.0031;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 201839433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.850;LDAF=0.0227;AVGPOST=0.9785;RSQ=0.6463;ERATE=0.0016;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201839471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7727;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201839690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.952;LDAF=0.0524;AVGPOST=0.9946;RSQ=0.9619;ERATE=0.0006;THETA=0.0036;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 201839758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0522;AVGPOST=0.9968;RSQ=0.9756;ERATE=0.0005;THETA=0.0025;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201839845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0055;AVGPOST=0.9955;RSQ=0.6985;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201839904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0303;AVGPOST=0.9910;RSQ=0.8671;ERATE=0.0013;THETA=0.0021;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 201839961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1201;AVGPOST=0.9899;RSQ=0.9725;ERATE=0.0014;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 201840391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0190;AVGPOST=0.9951;RSQ=0.9136;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201840403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0253;AVGPOST=0.9983;RSQ=0.9750;ERATE=0.0003;THETA=0.0010;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201840477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8383;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201840571 . T TG 4151 PASS INDEL;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0522;AVGPOST=0.9959;RSQ=0.9719;ERATE=0.0005;THETA=0.0018;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 201840693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0529;AVGPOST=0.9948;RSQ=0.9656;ERATE=0.0005;THETA=0.0037;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201840702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5669;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201840751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7193;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201840827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0033;AVGPOST=0.9959;RSQ=0.5526;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201841007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0541;AVGPOST=0.9979;RSQ=0.9859;ERATE=0.0004;THETA=0.0008;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 201841106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7159;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201841108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6739;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201841129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.722;LDAF=0.0092;AVGPOST=0.9945;RSQ=0.7665;ERATE=0.0004;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201841133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0282;AVGPOST=0.9962;RSQ=0.9444;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 201841142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0124;AVGPOST=0.9994;RSQ=0.9813;ERATE=0.0003;THETA=0.0023;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201841245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0145;AVGPOST=0.9973;RSQ=0.9291;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201841281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.512;LDAF=0.0199;AVGPOST=0.9783;RSQ=0.5454;ERATE=0.0008;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201841639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0454;AVGPOST=0.9978;RSQ=0.9805;ERATE=0.0005;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201841728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9600;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201841847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201841983 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201842021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9488;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201842035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5760;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201842120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1047;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0005;THETA=0.0012;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 201842121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9599;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201842217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0012;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201842260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0444;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0009;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 201842319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7790;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201842335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201842442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201842449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0659;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0009;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 201842460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9257;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201842511 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201842611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0428;AVGPOST=0.9986;RSQ=0.9884;ERATE=0.0003;THETA=0.0013;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 201842774 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201842820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0223;AVGPOST=0.9988;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 201842834 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201842967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7162;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201842977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7008;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201843127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201843307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201843379 rs75091067 C CCTT 98006 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.6517;AVGPOST=0.9852;RSQ=0.9755;ERATE=0.0005;THETA=0.0003;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 201843414 . C CTTA 34435 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.6522;AVGPOST=0.9856;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 201843415 . T TTCC 51770 PASS INDEL;BAVGPOST=0.957;BRSQ=0.924;LDAF=0.6282;AVGPOST=0.9429;RSQ=0.9135;ERATE=0.0135;THETA=0.0003;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 201843416 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6413;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201843931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3408;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201843946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8708;ERATE=0.0006;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201844018 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844023 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1761;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 201844046 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1750;AVGPOST=0.9973;RSQ=0.9926;ERATE=0.0005;THETA=0.0004;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 201844095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201844117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201844242 . CT C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.6977;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201844321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7099;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201844475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8686;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201844536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4571;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 201844616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1879;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0002;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 201844630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7983;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201844794 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4446;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844938 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201844968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201844986 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4667;AVGPOST=0.9959;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 201845056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201845068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7554;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=1651;AN=2184 GT:DS:GL:BD 0.75595236 1
1 201845077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201845200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201845270 . TTTG T 543 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0138;AVGPOST=0.9906;RSQ=0.7348;ERATE=0.0014;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201845297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8358;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201845338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7570;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201845350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201845563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201845652 . GA G 568 PASS INDEL;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9255;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201845660 . ATTGTT A 428 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0106;AVGPOST=0.9977;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201845821 . TTGTTTC T 1125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201845822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201845831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201845949 . AT A 2415 PASS INDEL;BAVGPOST=0.984;BRSQ=0.840;LDAF=0.0346;AVGPOST=0.9908;RSQ=0.8922;ERATE=0.0009;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201846035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201846096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201846140 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201846147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8717;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201846148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201846199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 201846208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201846256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6258;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201846425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201846437 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201846508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9559;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201846589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201846600 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4731;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 201846672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.6688;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201846729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0257;AVGPOST=0.9975;RSQ=0.9574;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201846739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201846759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201846822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9374;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201846825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201846826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8629;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201846898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6951;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201846928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201846995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201847029 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201847162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.449;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4195;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201847215 . GGT G 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201847358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201847368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201847390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201847427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201847434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1960;AVGPOST=0.9963;RSQ=0.9895;ERATE=0.0007;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 201847560 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9552;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201847577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7267;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201847648 . TTATA T 287 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5132;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201847696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9973;RSQ=0.8785;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201847700 . CAA C 1564 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201847821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201848293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201848364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201848396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.7756;ERATE=0.0010;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201848406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8963;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201848407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6571;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201848442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9456;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201848558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4954;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6994;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 201848683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201848701 . CA C 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201848821 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201848967 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.6970;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201849020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201849164 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7470;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201849289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0003;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201849456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201849470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201849634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201849647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5290;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201849699 . G GT 911 PASS INDEL;BAVGPOST=0.979;BRSQ=0.670;LDAF=0.0519;AVGPOST=0.9438;RSQ=0.5399;ERATE=0.0127;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 201849711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5442;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201849814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201849877 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4149;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 201849919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0005;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201850007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201850021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201850154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8267;ERATE=0.0009;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201850184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2460;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 201850196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201850271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7295;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201850272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4153;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0009;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 201850390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7839;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 201850515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201850642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201850648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6424;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201850680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6669;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201850760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4156;AVGPOST=0.9954;RSQ=0.9937;ERATE=0.0005;THETA=0.0046;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 201850767 . T TC 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5839;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201850823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201850869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0045;AVGPOST=0.9950;RSQ=0.5454;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201850926 . G GT 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.7426;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201850958 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.822;LDAF=0.0171;AVGPOST=0.9918;RSQ=0.8208;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201851011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4155;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 201851014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4870;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201851110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9986;RSQ=0.9636;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201851181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7215;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201851195 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2016;AVGPOST=0.9978;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 201851322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201851401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4132;AVGPOST=0.9922;RSQ=0.9879;ERATE=0.0011;THETA=0.0002;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 201851556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0838;AVGPOST=0.9975;RSQ=0.9862;ERATE=0.0005;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201851638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.8096;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201851639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.885;LDAF=0.6499;AVGPOST=0.9096;RSQ=0.8539;ERATE=0.0170;THETA=0.0003;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 201851662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.865;LDAF=0.3564;AVGPOST=0.8955;RSQ=0.8324;ERATE=0.0243;THETA=0.0009;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 201851691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2382;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 201851838 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8715;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201851894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0841;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201851937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4148;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0008;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 201851941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201852030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201852089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7535;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201852134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7000;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 201852165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0833;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201852168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2013;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 201852275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4170;AVGPOST=0.9964;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 201852304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9481;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201852322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201852485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201852487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9281;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201852559 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6612;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201852562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4160;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0009;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 201852638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201852877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9020;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201852968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0128;AVGPOST=0.9981;RSQ=0.9425;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201852983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6901;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 201852994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201853065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9594;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201853103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201853189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9442;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201853223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0004;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201853348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201853435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201853467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201853491 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4976;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201853500 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201853541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9662;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201853590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9420;ERATE=0.0003;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201853596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9090;ERATE=0.0004;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201853775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7497;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201853815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8230;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201853821 . CA C 62 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6713;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201853829 . GAC G 1184 PASS INDEL;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0204;AVGPOST=0.9961;RSQ=0.9301;ERATE=0.0004;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201853965 . GAGTCTC G 2936 PASS INDEL;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0193;AVGPOST=0.9977;RSQ=0.9529;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201853969 . GTCTC G 2127 PASS INDEL;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0193;AVGPOST=0.9979;RSQ=0.9569;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201853971 . ACT A 646 PASS INDEL;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0098;AVGPOST=0.9990;RSQ=0.9545;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9563;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201853990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0105;AVGPOST=0.9983;RSQ=0.9300;ERATE=0.0004;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201854001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9380;ERATE=0.0005;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201854006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.682;LDAF=0.0181;AVGPOST=0.9884;RSQ=0.7643;ERATE=0.0012;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201854054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8674;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201854206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9621;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201854257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201854305 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3237;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201854360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201854412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201854646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.7376;ERATE=0.0009;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201854666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9358;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201854743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7092;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201854764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6241;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201854775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7106;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201854837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201854849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9717;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201855072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0026;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201855102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9742;ERATE=0.0003;THETA=0.0023;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201855118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8818;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201855119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0004;THETA=0.0018;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201855169 . A ACC 16417 PASS INDEL;BAVGPOST=0.939;BRSQ=0.879;LDAF=0.5251;AVGPOST=0.8969;RSQ=0.8426;ERATE=0.0464;THETA=0.0007;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201855250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5483;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201855430 . AAAAC A 86 PASS INDEL;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0066;AVGPOST=0.9922;RSQ=0.5251;ERATE=0.0026;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201855432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201855468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0004;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201855570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9293;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201855625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0109;AVGPOST=0.9977;RSQ=0.9175;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201855742 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0302;AVGPOST=0.9990;RSQ=0.9844;ERATE=0.0004;THETA=0.0010;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201855768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201855789 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9112;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201855871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4820;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201855951 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9387;ERATE=0.0006;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201856052 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0333;AVGPOST=0.9987;RSQ=0.9819;ERATE=0.0004;THETA=0.0011;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201856084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6375;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201856218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5440;AVGPOST=0.9950;RSQ=0.9916;ERATE=0.0005;THETA=0.0006;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 201856231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9700;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201856249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0044;AVGPOST=0.9940;RSQ=0.5057;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201856256 rs111539961 TTTG T 931 PASS INDEL;BAVGPOST=0.987;BRSQ=0.726;LDAF=0.0387;AVGPOST=0.9670;RSQ=0.6382;ERATE=0.0076;THETA=0.0024;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 201856353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9111;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201856405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5675;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201856417 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8612;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201856449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5033;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201856585 . GA G 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5060;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201856589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7937;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201856596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6116;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0005;THETA=0.0009;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 201856748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201856816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8998;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201856879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201856885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9990;RSQ=0.9833;ERATE=0.0003;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 201856946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6116;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0012;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 201857192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9779;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201857625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7855;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201857674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9337;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201857713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201857731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9235;ERATE=0.0003;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201857909 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9419;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201857912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201857933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9216;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201858040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201858047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8619;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201858057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4864;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201858181 . A AT 21 PASS INDEL;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0049;AVGPOST=0.9937;RSQ=0.4799;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201858186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8106;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201858248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9429;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201858255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3272;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 201858271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201858304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201858342 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7378;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201858422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9865;ERATE=0.0004;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201858574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201858590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201858707 . TA T 318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9308;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201858769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9178;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201858851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4492;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201858944 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201859132 rs74368069 G GA 4598 PASS INDEL;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0826;AVGPOST=0.9954;RSQ=0.9761;ERATE=0.0006;THETA=0.0004;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201859266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201859267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201859419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8642;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201859488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0059;AVGPOST=0.9978;RSQ=0.8501;ERATE=0.0010;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201859601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201859657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7787;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201859691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4866;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201859692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.5786;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201859751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8744;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201859770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8447;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201859782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6314;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201859842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1744;AVGPOST=0.9976;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 201859936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.910;LDAF=0.0288;AVGPOST=0.9952;RSQ=0.9343;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 201860047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6379;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201860099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201860300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201860388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0925;AVGPOST=0.9977;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201860393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201860507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201860591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201860851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201860854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6473;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201860949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3292;AVGPOST=0.9963;RSQ=0.9925;ERATE=0.0005;THETA=0.0010;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 201860955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7895;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201861057 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5013;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201861186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201861223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201861252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6886;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201861300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201861317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8067;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201861380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1695;AVGPOST=0.9974;RSQ=0.9922;ERATE=0.0005;THETA=0.0006;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 201861417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201861526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1436;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0004;THETA=0.0002;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 201861595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201861634 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.856;LDAF=0.0471;AVGPOST=0.9903;RSQ=0.9247;ERATE=0.0004;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 201861782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0047;AVGPOST=0.9953;RSQ=0.6319;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201862143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201862162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1433;AVGPOST=0.9920;RSQ=0.9764;ERATE=0.0007;THETA=0.0007;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 201862198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201862259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4851;ERATE=0.0005;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201862294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1730;AVGPOST=0.9963;RSQ=0.9893;ERATE=0.0007;THETA=0.0008;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 201862328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7876;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201862354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7642;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201862369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6145;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201862427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201862479 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201862482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7591;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201862588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9629;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201862602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201862641 . T TA 257 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4403;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201862732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9396;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201862748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201862805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0995;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201862862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201862912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201862956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4167;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201862985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201863013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8452;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201863258 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201863275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201863385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201863414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0110;AVGPOST=0.9943;RSQ=0.7884;ERATE=0.0011;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201863496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6616;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201863643 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9776;ERATE=0.0004;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201863830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3386;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 201863875 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.8205;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201863893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0345;AVGPOST=0.9984;RSQ=0.9853;ERATE=0.0002;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201864001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201864271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201864333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8364;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201864489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4802;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201864511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3272;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 201864598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7578;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201864617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1911;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 201864641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201864642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201864659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1560;AVGPOST=0.9967;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 201864691 . A AG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201865146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9295;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201865192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3346;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 201865208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7003;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201865251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201865273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4518;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201865323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3348;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 201865454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201865475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3386;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 201865762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.869;LDAF=0.0244;AVGPOST=0.9963;RSQ=0.9449;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201865803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201865998 . G GT 159 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0047;AVGPOST=0.9972;RSQ=0.7700;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201866074 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.629;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201866239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5314;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201866346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201866476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3273;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0005;THETA=0.0006;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 201866703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.8009;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201866744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.840;LDAF=0.0116;AVGPOST=0.9991;RSQ=0.9659;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201866847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201866849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201866850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201866888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201867057 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6792;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201867108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0311;AVGPOST=0.9968;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201867123 . GT G 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5715;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9720;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201867392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201867437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201867713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867720 rs5779567 GTGA G 36397 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3277;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 201867750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9333;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201867784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201867905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3343;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 201867939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201867973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201867989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0055;AVGPOST=0.9971;RSQ=0.8090;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201868065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9315;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201868091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9375;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201868433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0131;AVGPOST=0.9980;RSQ=0.9313;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201868476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201868627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9202;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201868858 . AT A 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5581;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201868970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0072;AVGPOST=0.9980;RSQ=0.8966;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201869019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5458;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201869086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0173;AVGPOST=0.9975;RSQ=0.9444;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201869179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201869299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201869301 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201869334 . G GAT 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6996;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201869455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2636;AVGPOST=0.9964;RSQ=0.9930;ERATE=0.0007;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 201869467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8844;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201869631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7317;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201869750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201869801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1168;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201869876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9244;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201869922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201869952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201870067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9528;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201870122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201870130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4199;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 201870144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201870162 . GTTGTTTT G 26093 PASS INDEL;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.4011;AVGPOST=0.9769;RSQ=0.9655;ERATE=0.0038;THETA=0.0006;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 201870223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9974;RSQ=0.8850;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201870254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0102;AVGPOST=0.9978;RSQ=0.9162;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201870268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4835;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201870292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201870462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9509;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201870487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8939;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201870546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201870629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201870677 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201870699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0851;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201870739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0848;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201870760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201870788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201871050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5598;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201871440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201871441 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6726;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201871452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201871468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9986;RSQ=0.9556;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201871579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7610;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201871594 . CA C 373 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8191;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201871637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8463;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201871920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201871933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4125;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 201871953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7433;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201872046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7343;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201872079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201872183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4126;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 201872340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9673;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201872482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201872536 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8605;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201872581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201872643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9555;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201872737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6973;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201872840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201872910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4226;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 201872942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201872955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8218;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201873015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2674;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 201873041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1327;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 201873049 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.4070;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201873245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.904;LDAF=0.0279;AVGPOST=0.9952;RSQ=0.9339;ERATE=0.0004;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201873300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7701;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201873330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201873371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1245;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 201873427 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201873500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5294;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201873534 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.798;LDAF=0.0124;AVGPOST=0.9962;RSQ=0.8654;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201873563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4399;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201873603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4204;AVGPOST=0.9831;RSQ=0.9742;ERATE=0.0030;THETA=0.0004;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 201873624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7436;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201873628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4807;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201873646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7345;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201874074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9777;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201874131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201874211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201874222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6707;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201874331 . TA T 657 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7927;ERATE=0.0004;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201874382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201874438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201874538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0328;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201874554 . T TC 25 PASS INDEL;BAVGPOST=0.998;BRSQ=0.574;LDAF=0.0051;AVGPOST=0.9945;RSQ=0.5810;ERATE=0.0008;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201874599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201874737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0016;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201874955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201874984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201875015 . TA T 649 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9287;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201875017 rs78848885 TA T 5792 PASS INDEL;BAVGPOST=0.923;BRSQ=0.854;LDAF=0.2958;AVGPOST=0.9269;RSQ=0.8839;ERATE=0.0086;THETA=0.0005;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 201875157 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.3259;AVGPOST=0.9896;RSQ=0.9823;ERATE=0.0007;THETA=0.0004;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 201875158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0085;AVGPOST=0.9970;RSQ=0.8751;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201875350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4363;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201875620 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3375;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 201875748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0406;AVGPOST=0.9985;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201875785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.5822;AVGPOST=0.9898;RSQ=0.9823;ERATE=0.0003;THETA=0.0009;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 201875888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9139;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201876008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201876100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0399;AVGPOST=0.9967;RSQ=0.9638;ERATE=0.0005;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201876200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8674;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201876255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9055;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201876544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201876548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0306;AVGPOST=0.9990;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201876550 . CCT C 5969 PASS INDEL;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0341;AVGPOST=0.9979;RSQ=0.9776;ERATE=0.0004;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 201876619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7280;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201876796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201876820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201876866 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4311;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0006;THETA=0.0007;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 201876912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201877005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201877010 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3376;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0007;THETA=0.0005;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 201877067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201877134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4386;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0005;THETA=0.0007;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 201877178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4306;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0009;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 201877209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7865;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201877254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8596;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201877492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0487;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 201877493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201877561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9052;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201877580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7920;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201877588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5509;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201877594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201877624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4765;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201877706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9766;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201877730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8768;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201877787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0822;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201878125 . TGAAAG T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201878156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9302;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201878189 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6745;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201878342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6398;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201878358 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0124;AVGPOST=0.9985;RSQ=0.9530;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201878380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0154;AVGPOST=0.9975;RSQ=0.9385;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201878459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201878522 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201878537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201878583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6781;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201878756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2511;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0002;THETA=0.0008;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 201878856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8834;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201878983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9803;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201879117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201879126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201879157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201879179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201879302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7384;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201879318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0528;AVGPOST=0.9964;RSQ=0.9684;ERATE=0.0005;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 201879368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0521;AVGPOST=0.9979;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 201879372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9250;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201879385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201879389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201879411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5747;ERATE=0.0004;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201879566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.899;LDAF=0.5495;AVGPOST=0.9176;RSQ=0.8858;ERATE=0.0166;THETA=0.0019;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 201879684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0109;AVGPOST=0.9969;RSQ=0.8860;ERATE=0.0008;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201879872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6009;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201879882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9254;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201879952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201880018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.667;LDAF=0.0076;AVGPOST=0.9928;RSQ=0.6305;ERATE=0.0006;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201880035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8312;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201880042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.787;LDAF=0.0127;AVGPOST=0.9971;RSQ=0.9082;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201880066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9957;RSQ=0.6580;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201880067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2511;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0007;THETA=0.0005;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 201880122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0072;AVGPOST=0.9968;RSQ=0.8342;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201880195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9402;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201880218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.447;LDAF=0.0040;AVGPOST=0.9949;RSQ=0.4722;ERATE=0.0008;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201880219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6474;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201880265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201880266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201880267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.9065;ERATE=0.0004;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201880318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0349;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201880341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.6837;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201880357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9523;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201880400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0092;AVGPOST=0.9976;RSQ=0.9028;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201880407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201880412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5927;AVGPOST=0.9911;RSQ=0.9856;ERATE=0.0010;THETA=0.0018;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 201880717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.791;LDAF=0.0492;AVGPOST=0.9830;RSQ=0.8848;ERATE=0.0002;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201880760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9983;RSQ=0.9092;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201880774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9963;RSQ=0.8738;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201880802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9116;ERATE=0.0007;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201880804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0056;AVGPOST=0.9938;RSQ=0.5764;ERATE=0.0008;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201880821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0203;AVGPOST=0.9971;RSQ=0.9344;ERATE=0.0006;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201880868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9662;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201881020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201881030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.5901;AVGPOST=0.9742;RSQ=0.9617;ERATE=0.0054;THETA=0.0010;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 201881035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5910;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0008;THETA=0.0007;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 201881118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8476;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201881173 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8142;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201881191 rs71785163 CAT C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6203;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201881298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0396;AVGPOST=0.9983;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201881332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8593;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0003;THETA=0.0018;AC=1878;AN=2184 GT:DS:GL:BD 0.85989010 1
1 201881406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5825;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201881440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9987;RSQ=0.9229;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201881447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9805;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201881449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6677;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201881461 . T TGAG 3061 PASS INDEL;BAVGPOST=0.995;BRSQ=0.853;LDAF=0.0197;AVGPOST=0.9991;RSQ=0.9793;ERATE=0.0004;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201881520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201881544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7606;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201881610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7180;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201881621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9634;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201881624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7645;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201881664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201881767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201881771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5926;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0010;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 201881797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201881941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201881983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9209;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201881985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201881990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8405;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201881998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6572;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201882030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201882090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201882098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9827;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882152 . G GA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7517;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201882175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6345;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201882254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9683;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201882289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201882362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=0.9990;RSQ=0.9689;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201882473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9684;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882499 . GAA G 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7690;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201882623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201882760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9564;AVGPOST=0.9981;RSQ=0.9860;ERATE=0.0002;THETA=0.0005;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 201882804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201882855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5922;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 201882878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201882879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7538;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201882893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201882905 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5925;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 201882917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201882946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8362;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201882994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201883016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201883037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8510;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201883385 . G GA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201883470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201883507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9639;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201883518 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2063;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 201883591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8582;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201883673 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201883733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201883739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8682;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201883742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201883760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0105;AVGPOST=0.9925;RSQ=0.7155;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201883903 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8299;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 201883984 rs11398441 C CT 28049 PASS INDEL;BAVGPOST=0.974;BRSQ=0.959;LDAF=0.4562;AVGPOST=0.9718;RSQ=0.9587;ERATE=0.0062;THETA=0.0007;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 201884088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8287;AVGPOST=0.9973;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 201884122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8558;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201884217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6512;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201884521 . TG T 531 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201884536 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.651;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5924;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201884639 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6450;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201884693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6514;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201884718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0156;AVGPOST=0.9986;RSQ=0.9574;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201884766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201884926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8477;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201884929 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9432;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201885191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 201885235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9176;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201885276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8493;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201885404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8551;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201885667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5614;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201885746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5945;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201885802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3454;AVGPOST=0.9951;RSQ=0.9913;ERATE=0.0007;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 201885827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0701;AVGPOST=0.9984;RSQ=0.9898;ERATE=0.0004;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 201885873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201885990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7374;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201885994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201886014 . TC T 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201886128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0191;AVGPOST=0.9991;RSQ=0.9794;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201886171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.7876;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201886232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4790;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 201886366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9530;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201886541 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0065;AVGPOST=0.9954;RSQ=0.7357;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201886558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201886604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.8073;AVGPOST=0.9768;RSQ=0.9483;ERATE=0.0028;THETA=0.0005;AC=1773;AN=2184 GT:DS:GL:BD 0.81181318 1
1 201886860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201886960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201886967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7022;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201887004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201887009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201887025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7180;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201887228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7591;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201887232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7140;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201887322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8487;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 201887488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201887606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7508;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201887751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201887796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9370;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201887828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201887888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0483;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 201887915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201887963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201888027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6498;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201888054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201888137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201888247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4049;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201888339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8474;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 201888372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8317;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201888421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888447 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5733;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201888491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201888508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9988;RSQ=0.9690;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201888533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5282;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201888567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4299;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9645;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201888749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0729;AVGPOST=0.9977;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 201888799 . TA T 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4639;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201888943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201889075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201889316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201889353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3140;AVGPOST=0.9900;RSQ=0.9804;ERATE=0.0012;THETA=0.0010;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 201889410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7199;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201889422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201889473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201889516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201889567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7468;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201889636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201889687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201889794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0670;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0004;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 201889825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201889977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201890123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201890132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201890194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201890270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.7112;ERATE=0.0005;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201890295 . GAATA G 195 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7572;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201890388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7032;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201890412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8439;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201890456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0073;AVGPOST=0.9973;RSQ=0.8528;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201890457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0244;AVGPOST=0.9984;RSQ=0.9746;ERATE=0.0004;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201890491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7239;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201890533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5459;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201890559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0519;AVGPOST=0.9991;RSQ=0.9927;ERATE=0.0004;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201890569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4982;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201890577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.855;LDAF=0.0400;AVGPOST=0.9882;RSQ=0.8837;ERATE=0.0006;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201890788 . G GA 2201 PASS INDEL;BAVGPOST=0.974;BRSQ=0.786;LDAF=0.0868;AVGPOST=0.9283;RSQ=0.6530;ERATE=0.0149;THETA=0.0010;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 201890793 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7560;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201890799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6040;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201890904 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201891021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7007;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201891142 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.9810;AVGPOST=0.9959;RSQ=0.9153;ERATE=0.0006;THETA=0.0017;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 201891368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0179;AVGPOST=0.9969;RSQ=0.9352;ERATE=0.0004;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201891488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.7779;ERATE=0.0008;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201891491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201891582 rs5779838 GT G 1115 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9670;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201891649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5263;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201891790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6796;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201891938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 201891960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6244;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201892027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.6714;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201892087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8480;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0009;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 201892161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8485;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 201892318 . TTC T 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201892440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9248;ERATE=0.0004;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201892531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5666;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201892548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0518;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 201892578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5092;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201892688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6694;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201892837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6311;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201892971 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7269;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201892978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6343;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201893471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5844;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201893643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.485;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7194;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201893905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6420;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201894036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0328;AVGPOST=0.9984;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201894074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201894217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8734;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201894241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7418;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201894247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8667;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201894376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201894431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7183;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201894493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201894608 . TC T 456 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8719;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201894609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201894613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201894615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4337;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 201894798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.8013;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201894940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201894975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8572;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201894980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201895073 . CTG C 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5553;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201895083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8743;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201895093 . CT C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3657;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201895185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201895366 rs57336611 C CAGTG 7896 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0236;AVGPOST=0.9987;RSQ=0.9790;ERATE=0.0004;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201895538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201895599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7792;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201895644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201895790 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4765;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201895898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201895993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9400;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201896227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9820;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 201896306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9267;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201896391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4261;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201896521 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1582;AVGPOST=0.9977;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 201896572 . AT A 458 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9954;RSQ=0.7438;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201896578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201896618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6253;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201896704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7954;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201896864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.6129;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201896872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7373;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201896925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0326;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201897000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201897019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9784;AVGPOST=0.9987;RSQ=0.9781;ERATE=0.0003;THETA=0.0006;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 201897143 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6591;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201897274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0112;AVGPOST=0.9968;RSQ=0.8883;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201897325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9685;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201897326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7027;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201897417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201897581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9780;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 201897591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9517;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201897641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0138;AVGPOST=0.9964;RSQ=0.9075;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 201897654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201897663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9378;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201897668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0320;AVGPOST=0.9985;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 201897831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.9154;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201897878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0002;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201898164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201898279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6824;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201898365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201898406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5582;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201898410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9465;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201898628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5392;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 201898756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0049;AVGPOST=0.9998;RSQ=0.9786;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201898780 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6523;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201898944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201898962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201899025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201899038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201899164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0331;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201899200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201899411 . C CAA 215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201899460 . GT G 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201899464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201899478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201899491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201899640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201899746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7261;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201899880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7817;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201899969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0003;THETA=0.0008;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201899993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9386;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201900020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201900068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7695;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201900086 . TC T 2534 PASS INDEL;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0332;AVGPOST=0.9991;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201900086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 201900168 . A AGAGT 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4943;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201900206 . GAA G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201900251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201900271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201900315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201900353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9085;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201900438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.666;LDAF=0.0354;AVGPOST=0.9865;RSQ=0.8491;ERATE=0.0008;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 201900703 . GA G 129 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7512;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201900836 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0312;AVGPOST=0.9989;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201901283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9977;RSQ=0.9514;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201901358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0156;AVGPOST=0.9974;RSQ=0.9355;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201901494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0067;AVGPOST=0.9964;RSQ=0.8115;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201901505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8327;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201901695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201901816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8685;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201901822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201901825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201901909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0002;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201902059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201902093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201902123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0653;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0002;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 201902139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7188;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201902146 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201902169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201902248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201902266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201902306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7089;ERATE=0.0014;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201902322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5590;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201902330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.840;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8950;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201902367 . A AATTG 232 PASS INDEL;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7830;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201902527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6841;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201902590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4341;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 201902646 . C CAA 1003 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0076;AVGPOST=0.9972;RSQ=0.8736;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201902714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201902716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0651;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0002;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 201902730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0002;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 201902742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6463;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201902884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5176;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201902897 rs75346358 TA T 11040 PASS INDEL;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.1264;AVGPOST=0.9916;RSQ=0.9678;ERATE=0.0010;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 201902921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0186;AVGPOST=0.9983;RSQ=0.9651;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201902930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7622;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201902945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201903057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201903097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0781;AVGPOST=0.9984;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 201903109 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8125;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201903230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0551;AVGPOST=0.9985;RSQ=0.9892;ERATE=0.0004;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 201903324 . GTAGT G 261 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.3925;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201903698 . C CA 1405 PASS INDEL;BAVGPOST=0.996;BRSQ=0.881;LDAF=0.0176;AVGPOST=0.9961;RSQ=0.9018;ERATE=0.0008;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201903710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201903758 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201903862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9587;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201903912 . CCT C 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201903984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9495;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201904014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6033;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 201904056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0608;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 201904123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0386;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 201904197 rs34625341 TAA T 29512 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2079;AVGPOST=0.9957;RSQ=0.9902;ERATE=0.0008;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 201904199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7045;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201904479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7464;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201904497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904603 rs35144333 TC T 2934 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9991;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 201904673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201904785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7296;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201904906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201904910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.7982;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201904935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0608;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 201905014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 201905028 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9563;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201905052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3231;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0010;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 201905220 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201905242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201905256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8474;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201905270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3205;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 201905306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201905358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201905360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201905430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201905495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3793;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 201905589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201905863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201905958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7275;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201905974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4987;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201906013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7832;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201906036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201906084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0617;AVGPOST=0.9980;RSQ=0.9840;ERATE=0.0007;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 201906109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9227;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201906128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8710;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201906205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201906339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6870;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201906432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0607;AVGPOST=0.9991;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 201906685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201906751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201907195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.8863;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201907207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201907319 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4501;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201907490 . CAAAG C 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201907867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201907915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8768;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201907917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201907918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7677;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201907946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8050;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201907951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201908064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3904;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 201908143 . A AT 1468 PASS INDEL;BAVGPOST=0.983;BRSQ=0.785;LDAF=0.0545;AVGPOST=0.9578;RSQ=0.6775;ERATE=0.0074;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 201908144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201908148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8023;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201908191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201908199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9942;AVGPOST=0.9994;RSQ=0.9522;ERATE=0.0003;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 201908310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8657;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201908348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0085;AVGPOST=0.9976;RSQ=0.8983;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201908363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0392;AVGPOST=0.9990;RSQ=0.9907;ERATE=0.0002;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201908500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201908570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8490;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201908645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201908708 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3546;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 201908760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201908828 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3972;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0013;THETA=0.0004;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 201908975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201908991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201908998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9176;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201909016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0074;AVGPOST=0.9981;RSQ=0.9196;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201909261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201909300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201909681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201909686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7930;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7893;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201909768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7982;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201909861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0137;AVGPOST=0.9979;RSQ=0.9488;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201909978 . CA C 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201909998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7993;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201910087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201910131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201910164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8715;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201910455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201910583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6668;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201910594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201910701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201910916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8059;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201910948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201911279 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201911301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2795;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 201911307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201911350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201911373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201911417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7507;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201911637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7225;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201911677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6384;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201911697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7895;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201911728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201911749 rs56781330 TGA T 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.7145;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201911776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0836;AVGPOST=0.9932;RSQ=0.9708;ERATE=0.0006;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201911799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0807;AVGPOST=0.9929;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 201911815 . TTAA T 8185 PASS INDEL;BAVGPOST=0.956;BRSQ=0.901;LDAF=0.2715;AVGPOST=0.9540;RSQ=0.9132;ERATE=0.0067;THETA=0.0003;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 201911870 rs67510268 TAAG T 26752 PASS INDEL;BAVGPOST=0.967;BRSQ=0.929;LDAF=0.2831;AVGPOST=0.9772;RSQ=0.9594;ERATE=0.0003;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 201911871 . AAGT A 10216 PASS INDEL;BAVGPOST=0.962;BRSQ=0.918;LDAF=0.2841;AVGPOST=0.9622;RSQ=0.9321;ERATE=0.0033;THETA=0.0004;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 201911875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0078;AVGPOST=0.9948;RSQ=0.7597;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201912081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5624;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201912082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201912111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201912128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8121;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201912156 . TC T 52 PASS INDEL;BAVGPOST=0.971;BRSQ=0.413;LDAF=0.0461;AVGPOST=0.9384;RSQ=0.4455;ERATE=0.0093;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201912188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0051;AVGPOST=0.9938;RSQ=0.5299;ERATE=0.0009;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201912336 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.623;LDAF=0.0100;AVGPOST=0.9916;RSQ=0.6627;ERATE=0.0010;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201912403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0080;AVGPOST=0.9981;RSQ=0.8931;ERATE=0.0004;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201912611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1239;AVGPOST=0.9967;RSQ=0.9876;ERATE=0.0004;THETA=0.0008;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 201912679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8627;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201912780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201912937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0120;AVGPOST=0.9983;RSQ=0.9525;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201912938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.922;LDAF=0.0198;AVGPOST=0.9969;RSQ=0.9414;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201912966 . CCTA C 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.4889;ERATE=0.0016;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201913093 . CAT C 233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.5965;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201913136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201913137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7695;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201913188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201913318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0134;AVGPOST=0.9992;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201913343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201913365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8831;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201913555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7715;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201913584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9578;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201913603 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201913624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201913625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1997;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 201913665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201913817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201913970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8260;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201914086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9708;ERATE=0.0004;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201914127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8810;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201914140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201914303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201914361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201914425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9553;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201914436 rs11442153 T TA 11170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0503;AVGPOST=0.9984;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 201914462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5734;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201914612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7623;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201914693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 201914705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9983;RSQ=0.9161;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201914809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0056;AVGPOST=0.9957;RSQ=0.6655;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201915259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.8941;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201915323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7586;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201915332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6188;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201915589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201915808 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9774;AVGPOST=0.9929;RSQ=0.8859;ERATE=0.0018;THETA=0.0004;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 201915822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201915868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201915895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201915908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201915930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201916161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201916184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2446;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 201916235 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201916263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201916505 . CCT C 12227 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3172;AVGPOST=0.9942;RSQ=0.9892;ERATE=0.0007;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 201916537 rs34006046 CTA C 43489 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3196;AVGPOST=0.9938;RSQ=0.9889;ERATE=0.0006;THETA=0.0002;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 201916538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0141;AVGPOST=0.9987;RSQ=0.9574;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201916596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9428;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201916723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201916749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201916826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201916839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201916865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8131;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201917001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201917021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201917079 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1871;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 201917090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201917191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201917404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0772;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 201917493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6794;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201917652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8553;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201917655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7847;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201917675 . T TC 526 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0125;AVGPOST=0.9958;RSQ=0.8779;ERATE=0.0007;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201917702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0018;AVGPOST=0.9971;RSQ=0.3400;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201917729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4369;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201917777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2805;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201917950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9980;RSQ=0.8893;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201917987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201918213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201918227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2816;AVGPOST=0.9922;RSQ=0.9856;ERATE=0.0010;THETA=0.0002;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 201918315 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.9777;AVGPOST=0.9937;RSQ=0.8972;ERATE=0.0011;THETA=0.0002;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 201918350 . CTG C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4578;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201918452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201918459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201918482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201918489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8453;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201918511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7462;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201918567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8317;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201918569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9991;RSQ=0.9668;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201918602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3184;AVGPOST=0.9965;RSQ=0.9938;ERATE=0.0006;THETA=0.0002;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 201918780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.968;LDAF=0.4495;AVGPOST=0.9846;RSQ=0.9798;ERATE=0.0006;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 201918834 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.968;LDAF=0.4482;AVGPOST=0.9832;RSQ=0.9774;ERATE=0.0008;THETA=0.0002;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 201918835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201918964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6434;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201919012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201919068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201919159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0107;AVGPOST=0.9981;RSQ=0.9345;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201919227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201919247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2928;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 201919477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201919533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7944;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 201919535 . GAACT G 735 PASS INDEL;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0075;AVGPOST=0.9915;RSQ=0.5737;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201919540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6415;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201919544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201919807 . TTTG T 2049 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9459;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201919923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9351;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201920123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201920127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0131;AVGPOST=0.9973;RSQ=0.9139;ERATE=0.0003;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201920128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9990;RSQ=0.9929;ERATE=0.0003;THETA=0.0008;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 201920274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8325;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 201920479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201920527 rs77636922 TCA T 32263 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2968;AVGPOST=0.9934;RSQ=0.9894;ERATE=0.0005;THETA=0.0004;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 201920546 . CA C 412 PASS INDEL;BAVGPOST=0.859;BRSQ=0.665;LDAF=0.1670;AVGPOST=0.8729;RSQ=0.7325;ERATE=0.0013;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 201920549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201920629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201920715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201920861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9998;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201920979 . TA T 470 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9394;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201921120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7948;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=1738;AN=2184 GT:DS:GL:BD 0.79578757 1
1 201921300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9705;ERATE=0.0003;THETA=0.0020;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201921357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5730;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201921494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7794;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201921669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4641;AVGPOST=0.9903;RSQ=0.9864;ERATE=0.0005;THETA=0.0005;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 201921700 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6087;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201921711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201921801 . ACTTG A 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5459;ERATE=0.0005;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201921881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201921891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0411;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 201922038 . CCAA C 932 PASS INDEL;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8491;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201922136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201922311 . TTCA T 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201922386 . TACC T 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0045;AVGPOST=0.9930;RSQ=0.3471;ERATE=0.0015;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201922539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5140;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201922589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.784;LDAF=0.0362;AVGPOST=0.9813;RSQ=0.8051;ERATE=0.0007;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 201922702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201922706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.286;LDAF=0.0092;AVGPOST=0.9936;RSQ=0.6836;ERATE=0.0010;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201922853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0245;AVGPOST=0.9978;RSQ=0.9660;ERATE=0.0006;THETA=0.0060;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201922955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.959;LDAF=0.0908;AVGPOST=0.9890;RSQ=0.9530;ERATE=0.0006;THETA=0.0007;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 201922958 rs17552601 T TC 12396 PASS INDEL;BAVGPOST=0.963;BRSQ=0.928;LDAF=0.3028;AVGPOST=0.9642;RSQ=0.9440;ERATE=0.0014;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 201922974 . C CA 1344 PASS INDEL;BAVGPOST=0.893;BRSQ=0.732;LDAF=0.2333;AVGPOST=0.9055;RSQ=0.8136;ERATE=0.0018;THETA=0.0005;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 201922977 . C CA 1977 PASS INDEL;BAVGPOST=0.904;BRSQ=0.779;LDAF=0.2524;AVGPOST=0.9114;RSQ=0.8406;ERATE=0.0028;THETA=0.0014;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 201922980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.8857;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201922995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7788;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201923051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0096;AVGPOST=0.9972;RSQ=0.8802;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201923133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.520;LDAF=0.0096;AVGPOST=0.9903;RSQ=0.5826;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201923199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7226;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201923250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.726;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8530;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201923537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0081;AVGPOST=0.9979;RSQ=0.8945;ERATE=0.0003;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201923576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5862;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201923623 rs34751045 T TA 4354 PASS INDEL;BAVGPOST=0.711;BRSQ=0.453;LDAF=0.4772;AVGPOST=0.6660;RSQ=0.4135;ERATE=0.0482;THETA=0.0014;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 201923669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0073;AVGPOST=0.9963;RSQ=0.7945;ERATE=0.0006;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201923731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.961;LDAF=0.2937;AVGPOST=0.9776;RSQ=0.9636;ERATE=0.0010;THETA=0.0008;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 201923826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201923939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9738;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201923982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9650;ERATE=0.0003;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201923987 . GGA G 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4631;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201924047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201924070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201924102 . GTGTC G 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8628;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201924126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8719;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201924170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201924252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201924374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201924504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8907;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201924526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0251;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201924567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0251;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0040;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201924732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9513;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201924773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201924804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8980;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201924832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7478;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201925013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0043;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 201925023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201925305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4533;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201925338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9026;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201925358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201925426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201925442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201925597 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5936;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201925603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.909;LDAF=0.0320;AVGPOST=0.9941;RSQ=0.9238;ERATE=0.0010;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201925785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.3972;AVGPOST=0.9795;RSQ=0.9686;ERATE=0.0031;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 201925786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.2725;AVGPOST=0.9728;RSQ=0.9511;ERATE=0.0067;THETA=0.0037;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 201925833 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4600;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201925847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.726;LDAF=0.0108;AVGPOST=0.9949;RSQ=0.8094;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201925890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0089;AVGPOST=0.9968;RSQ=0.8471;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201925910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.7963;ERATE=0.0006;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201925987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8422;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201926000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7886;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201926104 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2620;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0004;THETA=0.0010;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 201926149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0179;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 201926171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201926249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7887;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201926409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8589;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201926463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8131;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201926500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201926518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9585;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201926580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201926652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201926816 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0666;AVGPOST=0.9986;RSQ=0.9918;ERATE=0.0004;THETA=0.0009;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 201926845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201926903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0729;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201926992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9651;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201927029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0004;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201927048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201927052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201927163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6809;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201927179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6598;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201927316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201927332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201927340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7446;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201927437 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6037;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201927470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6951;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201927528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201927564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3405;AVGPOST=0.9947;RSQ=0.9918;ERATE=0.0016;THETA=0.0076;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 201927736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1885;AVGPOST=0.9957;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 201927761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201927844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0983;AVGPOST=0.9977;RSQ=0.9914;ERATE=0.0006;THETA=0.0053;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 201927852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201927877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0836;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0003;THETA=0.0011;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 201927992 . TTAAG T 14845 PASS INDEL;BAVGPOST=0.985;BRSQ=0.922;LDAF=0.0790;AVGPOST=0.9794;RSQ=0.8986;ERATE=0.0006;THETA=0.0026;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 201928023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201928051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201928214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201928236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6645;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201928267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0056;AVGPOST=0.9974;RSQ=0.8240;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201928279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9292;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201928354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3190;AVGPOST=0.9936;RSQ=0.9895;ERATE=0.0007;THETA=0.0005;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 201928404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0235;AVGPOST=0.9989;RSQ=0.9814;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201928676 . TTAAAAA T 397 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6305;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201928683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9986;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 201928764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201928907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201928929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8219;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201929088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2105;AVGPOST=0.9907;RSQ=0.9822;ERATE=0.0005;THETA=0.0034;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 201929104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.2449;AVGPOST=0.9904;RSQ=0.9828;ERATE=0.0007;THETA=0.0017;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 201929213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0112;AVGPOST=0.9967;RSQ=0.8973;ERATE=0.0005;THETA=0.0100;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201929262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201929497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201929591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0369;AVGPOST=0.9977;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 201929614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0368;AVGPOST=0.9979;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 201929621 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7849;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201929657 . CT C 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0005;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201929702 . C CT 592 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8282;ERATE=0.0004;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201929821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0155;AVGPOST=0.9980;RSQ=0.9452;ERATE=0.0003;THETA=0.0020;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201929867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8422;AVGPOST=0.9950;RSQ=0.9842;ERATE=0.0003;THETA=0.0071;AC=1842;AN=2184 GT:DS:GL:BD 0.84340662 1
1 201929881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2601;AVGPOST=0.9935;RSQ=0.9878;ERATE=0.0029;THETA=0.0030;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 201929958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201929968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8505;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201929998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201930062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0778;AVGPOST=0.9982;RSQ=0.9897;ERATE=0.0005;THETA=0.0066;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 201930144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201930244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.8339;AVGPOST=0.9931;RSQ=0.9814;ERATE=0.0011;THETA=0.0016;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 201930272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0072;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201930314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9233;ERATE=0.0012;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201930334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201930362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201930427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201930431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0005;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201930591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7075;AVGPOST=0.9942;RSQ=0.9892;ERATE=0.0011;THETA=0.0075;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 201930626 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201930685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0598;AVGPOST=0.9982;RSQ=0.9892;ERATE=0.0003;THETA=0.0012;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 201930770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0126;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201930816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6881;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 201931041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2665;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0014;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 201931059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6890;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0005;THETA=0.0004;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 201931141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2684;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0011;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 201931166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201931203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201931224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4183;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 201931262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0472;AVGPOST=0.9978;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201931360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201931400 . CAA C 586 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201931432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8516;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201931461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201931477 . C CA 1504 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0149;AVGPOST=0.9979;RSQ=0.9350;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201931607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0514;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0004;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201931768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0090;AVGPOST=0.9990;RSQ=0.9548;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201931782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201931810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0461;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201931901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2676;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 201932040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8286;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201932191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8278;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201932220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201932234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0143;AVGPOST=0.9980;RSQ=0.9390;ERATE=0.0005;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 201932516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0511;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 201932545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5128;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201932635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0466;AVGPOST=0.9989;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 201932770 . TGTC T 1121 PASS INDEL;BAVGPOST=0.996;BRSQ=0.714;LDAF=0.0094;AVGPOST=0.9929;RSQ=0.7014;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 201932795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0406;AVGPOST=0.9988;RSQ=0.9873;ERATE=0.0005;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 201932830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0394;AVGPOST=0.9990;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201932881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9525;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201932997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9398;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201933103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8284;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201933170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.946;LDAF=0.0724;AVGPOST=0.9876;RSQ=0.9403;ERATE=0.0005;THETA=0.0008;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 201933196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9359;ERATE=0.0003;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201933207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9980;RSQ=0.8505;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201933210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201933303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0453;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 201933304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201933602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3090;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 201933603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0121;AVGPOST=0.9967;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201933632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0311;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 201933656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201933666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.3054;AVGPOST=0.9926;RSQ=0.9882;ERATE=0.0010;THETA=0.0002;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 201933751 rs3835569 AC A 305 PASS INDEL;BAVGPOST=0.970;BRSQ=0.478;LDAF=0.0386;AVGPOST=0.9549;RSQ=0.5306;ERATE=0.0025;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201933752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.437;LDAF=0.0114;AVGPOST=0.9817;RSQ=0.3733;ERATE=0.0054;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201933793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0067;AVGPOST=0.9974;RSQ=0.8442;ERATE=0.0023;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201933962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2680;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 201933964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201933984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3132;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 201934040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7320;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201934057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6157;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201934059 . GAA G 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6503;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201934247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8006;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201934432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201934552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 201934928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201934996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9075;ERATE=0.0012;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201934997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201935026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.863;LDAF=0.0420;AVGPOST=0.9856;RSQ=0.8670;ERATE=0.0283;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 201935155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201935367 rs78075843 CAGT C 2710 PASS INDEL;BAVGPOST=0.995;BRSQ=0.903;LDAF=0.0200;AVGPOST=0.9940;RSQ=0.8937;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 201935439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201935587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1782;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 201935625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201935752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201935804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201935837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201935894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201935895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201935960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201936017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0068;AVGPOST=0.9977;RSQ=0.8860;ERATE=0.0019;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201936100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201936106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201936151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9525;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201936168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0405;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 201936200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201936236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9327;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201936352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0907;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 201936422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201936431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201936527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0005;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201936744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 201936775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201936835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201936849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201936856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201936860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201937073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0019;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201937076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201937316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=0.9956;ERATE=0.0003;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201937345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0015;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201937358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0022;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201937399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201937472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201937485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5070;AVGPOST=0.9934;RSQ=0.9907;ERATE=0.0008;THETA=0.0006;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 201937587 rs112569747 GT G 3064 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0319;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0005;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 201937691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9991;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201937715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9732;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201937731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201937760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201937843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201937880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7287;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201937980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201937989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6464;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201937994 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0250;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201937997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9455;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201938085 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0401;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201938110 rs71568085 CA C 934 PASS INDEL;BAVGPOST=0.913;BRSQ=0.515;LDAF=0.1322;AVGPOST=0.8500;RSQ=0.4674;ERATE=0.0228;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 201938255 . A AC 164 PASS INDEL;BAVGPOST=0.988;BRSQ=0.597;LDAF=0.0164;AVGPOST=0.9833;RSQ=0.6045;ERATE=0.0012;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201938262 rs77481930 A AC 161 PASS INDEL;BAVGPOST=0.993;BRSQ=0.687;LDAF=0.0152;AVGPOST=0.9940;RSQ=0.8244;ERATE=0.0012;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 201938269 rs77481930 A AAC 1392 PASS INDEL;BAVGPOST=0.982;BRSQ=0.821;LDAF=0.0501;AVGPOST=0.9798;RSQ=0.8535;ERATE=0.0006;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 201938270 rs77481930 A AC 1196 PASS INDEL;BAVGPOST=0.986;BRSQ=0.865;LDAF=0.0427;AVGPOST=0.9840;RSQ=0.8563;ERATE=0.0006;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201938271 rs77481930 A AC 1330 PASS INDEL;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0178;AVGPOST=0.9959;RSQ=0.9181;ERATE=0.0011;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 201938272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0818;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201938349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.8151;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201938367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6241;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201938546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201938566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201938645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.896;LDAF=0.0697;AVGPOST=0.9903;RSQ=0.9493;ERATE=0.0005;THETA=0.0008;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 201938825 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7171;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201938887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0257;AVGPOST=0.9978;RSQ=0.9656;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201938954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4881;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201938967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1698;AVGPOST=0.9981;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 201938992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201939055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8591;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201939065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7353;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201939073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0253;AVGPOST=0.9975;RSQ=0.9681;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 201939074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1025;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 201939122 . TC T 1182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9672;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 201939222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7660;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201939243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201939333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7164;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 201939480 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7824;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201939549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8715;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201939749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201939751 . TACTGTG T 871 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9258;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201939895 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7143;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 201939924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201939936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7128;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0007;THETA=0.0002;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 201940025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201940233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6661;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201940236 . ACT A 96 PASS INDEL;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7850;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201940430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 201940516 . TC T 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4684;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201940539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201940599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201940616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6587;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201940659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201940663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5875;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201940666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201940700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201940710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4184;AVGPOST=0.9924;RSQ=0.9890;ERATE=0.0015;THETA=0.0006;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 201940824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5282;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201941024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5859;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201941082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7963;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201941107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7089;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201941181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4377;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201941262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6635;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201941309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4189;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0007;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 201941312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2294;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 201941353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7126;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0007;THETA=0.0004;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 201941377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4633;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201941410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0529;AVGPOST=0.9988;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 201941714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6733;AVGPOST=0.9877;RSQ=0.9796;ERATE=0.0028;THETA=0.0003;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 201941728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201941739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201941746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201941929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201941997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3662;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201942008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201942019 . TTTTA T 710 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8976;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201942109 rs78856244 TA T 46386 PASS INDEL;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4252;AVGPOST=0.9926;RSQ=0.9878;ERATE=0.0019;THETA=0.0006;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 201942134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201942368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9654;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201942371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.9034;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201942413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7317;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201942436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0087;AVGPOST=0.9978;RSQ=0.9227;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201942479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201942540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201942548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201942609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201942766 . GTT G 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201942816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6777;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 201942864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201942880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7013;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201942890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4186;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 201942920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9318;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201942932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201942990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5182;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201943127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3665;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201943335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5031;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201943452 . GTA G 19831 PASS INDEL;BAVGPOST=0.990;BRSQ=0.392;LDAF=0.9763;AVGPOST=0.9670;RSQ=0.4587;ERATE=0.0030;THETA=0.0002;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 201943555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201943594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6410;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201943743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 201943828 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201943929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4188;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 201943987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2505;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0020;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 201943988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4516;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201944108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201944217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8616;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201944417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201944435 rs76399062 GT G 27190 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3290;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0005;THETA=0.0006;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 201944440 . TC T 2149 PASS INDEL;BAVGPOST=0.914;BRSQ=0.816;LDAF=0.2697;AVGPOST=0.9196;RSQ=0.8591;ERATE=0.0033;THETA=0.0002;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 201944444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1006;AVGPOST=0.9978;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 201944588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201944629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0549;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0005;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 201944658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6065;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201944692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8475;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201944760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201944849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0276;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0001;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 201944956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9429;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201945064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9026;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201945094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201945179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7778;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201945214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201945254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 201945274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0553;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0001;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 201945339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201945487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6409;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201945499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201945510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4303;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 201945540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201945629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201945634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201945724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7777;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201945746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0651;AVGPOST=0.9938;RSQ=0.9644;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 201945770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8658;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201945807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201945955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201945979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2199;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 201946002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8569;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201946009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1546;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 201946049 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4856;AVGPOST=0.9992;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 201946058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7245;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201946076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201946093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201946179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6273;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201946211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.962;LDAF=0.9612;AVGPOST=0.9965;RSQ=0.9650;ERATE=0.0006;THETA=0.0003;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 201946300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.3196;AVGPOST=0.9882;RSQ=0.9800;ERATE=0.0018;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 201946301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201946500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201946502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201946593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0476;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 201946642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5865;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201946862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201946898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8505;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201946930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1648;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 201946946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3254;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 201946964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201946977 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8296;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201947017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201947062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9160;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201947192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9563;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201947486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201947569 . A AGTT 40499 PASS INDEL;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1665;AVGPOST=0.9952;RSQ=0.9887;ERATE=0.0019;THETA=0.0002;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 201947597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201947762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9453;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201947824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201947938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7917;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201947951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201947953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9619;AVGPOST=0.9988;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 201948024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6737;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201948120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8756;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201948148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201948158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0193;AVGPOST=0.9973;RSQ=0.9447;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 201948177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0134;AVGPOST=0.9976;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201948194 . C CA 681 PASS INDEL;BAVGPOST=0.982;BRSQ=0.607;LDAF=0.0319;AVGPOST=0.9697;RSQ=0.6205;ERATE=0.0059;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 201948221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4451;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201948227 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201948385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0212;AVGPOST=0.9968;RSQ=0.9516;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201948392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201948425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9625;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 201948432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201948436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201948489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201948540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 201948875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9971;RSQ=0.9625;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 201948886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.5453;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201948935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6009;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201948973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9624;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 201948979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9701;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201949033 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3159;AVGPOST=0.9884;RSQ=0.9815;ERATE=0.0006;THETA=0.0005;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 201949088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0033;AVGPOST=0.9943;RSQ=0.3352;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201949104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201949105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0163;AVGPOST=0.9967;RSQ=0.9156;ERATE=0.0007;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201949128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0383;AVGPOST=0.9984;RSQ=0.9817;ERATE=0.0005;THETA=0.0026;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201949141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201949235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5953;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201949253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1392;AVGPOST=0.9980;RSQ=0.9927;ERATE=0.0008;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 201949556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1394;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 201949623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9288;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201949629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5326;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201949707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6885;ERATE=0.0005;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201949771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9977;RSQ=0.8533;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201949930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9334;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201949944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201949975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1346;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 201949978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8836;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201950073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.8220;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201950105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3377;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201950140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4668;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201950608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0160;AVGPOST=0.9963;RSQ=0.8958;ERATE=0.0018;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 201950618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4628;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201950628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.817;LDAF=0.3376;AVGPOST=0.8845;RSQ=0.7709;ERATE=0.0929;THETA=0.0006;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 201950638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.828;LDAF=0.1080;AVGPOST=0.9421;RSQ=0.7892;ERATE=0.0110;THETA=0.0002;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 201950730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0182;AVGPOST=0.9947;RSQ=0.8934;ERATE=0.0008;THETA=0.0024;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 201950771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4804;AVGPOST=0.9894;RSQ=0.9854;ERATE=0.0007;THETA=0.0002;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 201950816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2065;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 201950856 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2792;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 201950876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2078;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0017;THETA=0.0035;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 201950954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201951001 . TA T 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5115;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201951002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201951039 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201951064 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.2961;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201951122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9320;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201951137 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 201951141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201951225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6401;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201951408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2850;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 201951409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2014;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 201951472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9383;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201951567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1354;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 201951670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201951739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.9057;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 201951847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201951853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201951859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201951942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8047;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201952038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201952179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201952204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201952221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201952285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1302;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 201952333 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8652;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201952389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 201952416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4821;AVGPOST=0.9953;RSQ=0.9925;ERATE=0.0012;THETA=0.0009;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 201952430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9439;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201952673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0400;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201952736 . GGGAGCCCT G 211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.408;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.2989;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201952782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9974;RSQ=0.8196;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201952801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9559;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 201952855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5499;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201952958 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201953052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0059;AVGPOST=0.9977;RSQ=0.8505;ERATE=0.0012;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201953201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6392;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201953250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201953275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201953329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201953385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201953412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8896;ERATE=0.0014;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201953449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8800;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201953524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201953702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201953715 . AC A 201 PASS INDEL;BAVGPOST=0.996;BRSQ=0.687;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.4904;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201953806 rs112809170 C CA 570 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9350;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201953807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8974;ERATE=0.0003;THETA=0.0046;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 201953904 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201954027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3833;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 201954031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9083;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201954162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9506;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 201954198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2065;AVGPOST=0.9931;RSQ=0.9852;ERATE=0.0006;THETA=0.0002;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 201954218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1217;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 201954223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.8891;ERATE=0.0003;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 201954228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0154;AVGPOST=0.9963;RSQ=0.9153;ERATE=0.0005;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201954283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3575;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 201954311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201954440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1221;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0043;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 201954502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201954709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6987;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 201954809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9434;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201954816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0846;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 201954853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201954882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201954938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201955152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6966;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0008;THETA=0.0012;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 201955283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.606;LDAF=0.0139;AVGPOST=0.9832;RSQ=0.5382;ERATE=0.0059;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 201955344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201955416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201955435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201955586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3506;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 201955603 . GGTAA G 782 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0049;AVGPOST=0.9948;RSQ=0.6064;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201955614 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4803;AVGPOST=0.9945;RSQ=0.9906;ERATE=0.0014;THETA=0.0003;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 201955635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1316;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 201955762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9738;ERATE=0.0003;THETA=0.0027;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 201955785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6533;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201955901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9702;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201955925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201955992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201956034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0720;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 201956196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201956257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201956296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201956326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201956406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6260;AVGPOST=0.9966;RSQ=0.9936;ERATE=0.0013;THETA=0.0001;AC=1368;AN=2184 GT:DS:GL:BD 0.62637365 1
1 201956419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6629;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201956485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201956556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0195;AVGPOST=0.9988;RSQ=0.9818;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 201956633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6206;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201956818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9489;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201956956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0808;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201957023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.677;LDAF=0.0067;AVGPOST=0.9939;RSQ=0.6759;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201957158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.569;LDAF=0.0046;AVGPOST=0.9960;RSQ=0.6312;ERATE=0.0009;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201957195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0160;AVGPOST=0.9941;RSQ=0.8649;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201957285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9983;RSQ=0.9599;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 201957405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201957487 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6379;AVGPOST=0.9962;RSQ=0.9927;ERATE=0.0009;THETA=0.0003;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 201957552 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3903;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201957577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6808;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201957602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0062;AVGPOST=0.9965;RSQ=0.7896;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201957613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201957621 . AAAAAG A 7530 PASS INDEL;BAVGPOST=0.987;BRSQ=0.906;LDAF=0.0737;AVGPOST=0.9769;RSQ=0.8789;ERATE=0.0031;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 201957658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201957795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201957829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7392;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201957886 . CG C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201957892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201957893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7204;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0005;THETA=0.0002;AC=1573;AN=2184 GT:DS:GL:BD 0.72023809 1
1 201958035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0550;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 201958096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8784;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201958282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201958299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7593;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201958406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9989;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 201958548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201958679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9062;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201958702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0563;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 201958761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0072;AVGPOST=0.9937;RSQ=0.6677;ERATE=0.0019;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201958883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6591;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201958944 rs10557944 CTT C 421 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9312;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201959038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 201959042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0801;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 201959047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201959292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201959477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959764 . AAAAC A 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0027;AVGPOST=0.9959;RSQ=0.3526;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201959837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0111;AVGPOST=0.9991;RSQ=0.9670;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 201959883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0992;AVGPOST=0.9976;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 201960131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8898;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201960148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1295;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 201960208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201960232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201960408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 201960477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7883;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201960572 . G GA 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5089;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201960626 . CTTAA C 4215 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0411;AVGPOST=0.9966;RSQ=0.9679;ERATE=0.0003;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 201960801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0388;AVGPOST=0.9992;RSQ=0.9922;ERATE=0.0002;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 201960823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7310;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201960924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201960999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1162;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0004;THETA=0.0007;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 201961074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.6311;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201961114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201961115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1552;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 201961290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.7289;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201961507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201961686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201961858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201961890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201961964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201961991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201962078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201962080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 201962132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9216;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201962196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201962210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201962442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1607;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 201962906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6016;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201962960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201962983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9683;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 201963247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0374;AVGPOST=0.9984;RSQ=0.9798;ERATE=0.0005;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 201963306 . CCTA C 459 PASS INDEL;BAVGPOST=0.990;BRSQ=0.887;LDAF=0.0504;AVGPOST=0.9928;RSQ=0.9405;ERATE=0.0004;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 201963395 . TACTA T 4266 PASS INDEL;BAVGPOST=0.990;BRSQ=0.885;LDAF=0.0497;AVGPOST=0.9951;RSQ=0.9589;ERATE=0.0004;THETA=0.0011;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 201963397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8711;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201963517 . GC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4507;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201963527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1163;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 201963534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5426;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201963646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0085;AVGPOST=0.9962;RSQ=0.8423;ERATE=0.0003;THETA=0.0034;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201964166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.1617;AVGPOST=0.9965;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 201964197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7611;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201964267 rs11363833 TG T 6558 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0626;AVGPOST=0.9983;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 201964430 . T TAACA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4762;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201964519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0343;AVGPOST=0.9973;RSQ=0.9665;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 201964554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201964633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0826;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 201964752 . A AG 166 PASS INDEL;BAVGPOST=0.996;BRSQ=0.831;LDAF=0.0177;AVGPOST=0.9923;RSQ=0.8174;ERATE=0.0007;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 201964803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201964883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9343;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 201965039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9607;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 201965150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5539;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965399 . T TA 1790 PASS INDEL;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0707;AVGPOST=0.9973;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 201965554 . A AT 10056 PASS INDEL;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0726;AVGPOST=0.9982;RSQ=0.9903;ERATE=0.0003;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 201965556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7254;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 201965586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201965666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7445;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1626;AN=2184 GT:DS:GL:BD 0.74450547 1
1 201965723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201965779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201965856 . ACT A 129 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7861;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201966050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0303;AVGPOST=0.9978;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 201966292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5710;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201966304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0033;AVGPOST=0.9960;RSQ=0.4866;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201966390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.361;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7869;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201966428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4482;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201966439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7638;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 201966620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9026;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 201966659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201966734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9025;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 201966814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 201966847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0449;AVGPOST=0.9978;RSQ=0.9846;ERATE=0.0004;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 201966875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5530;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 201967027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201967501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201967610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201967744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 201967815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8313;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 201967961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 201968012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201968228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201968302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 201968371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0944;AVGPOST=0.9957;RSQ=0.9816;ERATE=0.0003;THETA=0.0002;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 201968447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8250;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 201968477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5572;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 201968701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5535;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 201968872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.929;LDAF=0.0486;AVGPOST=0.9917;RSQ=0.9386;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 201968966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5519;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1