1092
10000
1 21178730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0033;AVGPOST=0.9960;RSQ=0.4630;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21178739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21178814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21178999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21179061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21179125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0421;AVGPOST=0.9991;RSQ=0.9899;ERATE=0.0004;THETA=0.0015;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21179269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21179273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0321;AVGPOST=0.9990;RSQ=0.9847;ERATE=0.0004;THETA=0.0009;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21179313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.904;LDAF=0.3952;AVGPOST=0.9583;RSQ=0.9433;ERATE=0.0014;THETA=0.0012;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 21179379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4350;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21179470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0128;AVGPOST=0.9970;RSQ=0.9149;ERATE=0.0006;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21179509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21179559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0130;AVGPOST=0.9940;RSQ=0.8432;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21179604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7020;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21179668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7210;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21179709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21179763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.764;LDAF=0.0803;AVGPOST=0.9540;RSQ=0.7420;ERATE=0.0465;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21179828 . CCT C 1612 PASS INDEL;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0113;AVGPOST=0.9972;RSQ=0.8971;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21179909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0420;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21179926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3597;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21180025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9588;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21180120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0428;AVGPOST=0.9977;RSQ=0.9749;ERATE=0.0007;THETA=0.0014;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21180231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2958;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0003;THETA=0.0009;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 21180277 . C CA 75 PASS INDEL;BAVGPOST=0.990;BRSQ=0.503;LDAF=0.0184;AVGPOST=0.9744;RSQ=0.4233;ERATE=0.0066;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21180281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21180381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21180529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21180776 . G GC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21180798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.509;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6517;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21180905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.458;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7618;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21180925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21181126 . AAAG A 619 PASS INDEL;BAVGPOST=0.997;BRSQ=0.666;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7424;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21181157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21181230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0316;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21181309 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21181529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21181563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21181774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8681;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 21181897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21181962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4027;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21182151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8234;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 21182341 rs72508743 T TG 112379 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9989;AVGPOST=0.9987;RSQ=0.5349;ERATE=0.0004;THETA=0.0015;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 21182400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9018;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21182502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7859;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21182627 . A AT 5181 PASS INDEL;BAVGPOST=0.984;BRSQ=0.810;LDAF=0.0471;AVGPOST=0.9725;RSQ=0.7730;ERATE=0.0023;THETA=0.0011;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 21182717 . G GTTGTTGTTT 79152 PASS INDEL;BAVGPOST=0.911;BRSQ=0.836;LDAF=0.3999;AVGPOST=0.8960;RSQ=0.8453;ERATE=0.0299;THETA=0.0005;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 21182722 rs60418667 T TG 5340 PASS INDEL;BAVGPOST=0.825;BRSQ=0.626;LDAF=0.2814;AVGPOST=0.8291;RSQ=0.6863;ERATE=0.0211;THETA=0.0005;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 21182733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.958;LDAF=0.8299;AVGPOST=0.9882;RSQ=0.9687;ERATE=0.0007;THETA=0.0004;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 21182802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.808;LDAF=0.0251;AVGPOST=0.9936;RSQ=0.9090;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21183011 . T TAC 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21183014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21183040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5304;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21183089 rs34141848 GA G 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5219;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21183133 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21183239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.917;LDAF=0.0295;AVGPOST=0.9956;RSQ=0.9383;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21183349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3177;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0024;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 21183727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3163;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0005;THETA=0.0005;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 21183965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8739;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21184074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9060;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21184092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0439;AVGPOST=0.9988;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21184117 . ATT A 495 PASS INDEL;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0006;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21184167 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21184248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21184353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3177;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0007;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 21184373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21184417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21184419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.858;LDAF=0.0849;AVGPOST=0.9899;RSQ=0.9536;ERATE=0.0004;THETA=0.0034;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 21184644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0207;AVGPOST=0.9985;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21184654 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0439;AVGPOST=0.9983;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 21184660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4715;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21184812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6398;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21184882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21184983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8288;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21185168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7099;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21185178 . AG A 641 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8837;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21185209 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0083;AVGPOST=0.9942;RSQ=0.6969;ERATE=0.0030;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21185290 . TTA T 10083 PASS INDEL;BAVGPOST=0.961;BRSQ=0.917;LDAF=0.2991;AVGPOST=0.9647;RSQ=0.9379;ERATE=0.0036;THETA=0.0005;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 21185294 rs113686417 TA T 18077 PASS INDEL;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.3140;AVGPOST=0.9823;RSQ=0.9705;ERATE=0.0019;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 21185295 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5348;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21185299 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21185359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8755;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21185396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21185431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21185499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21185532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21185552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7543;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21185573 . CT C 254 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21185628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21185653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21185710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0284;AVGPOST=0.9984;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21185717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21185898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21186159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21186173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.740;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8260;ERATE=0.0011;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21186250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2732;AVGPOST=0.9959;RSQ=0.9928;ERATE=0.0006;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 21186407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21186417 rs59460185 TA T 17391 PASS INDEL;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.3152;AVGPOST=0.9918;RSQ=0.9857;ERATE=0.0009;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 21186535 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21186537 . AT A 608 PASS INDEL;BAVGPOST=0.913;BRSQ=0.543;LDAF=0.0801;AVGPOST=0.9288;RSQ=0.6601;ERATE=0.0013;THETA=0.0008;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 21186541 . CAGG C 224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7076;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21186602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5072;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21186639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0234;AVGPOST=0.9976;RSQ=0.9576;ERATE=0.0005;THETA=0.0012;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21186653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7023;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21186741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6777;ERATE=0.0015;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21186786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2735;AVGPOST=0.9969;RSQ=0.9934;ERATE=0.0005;THETA=0.0010;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 21186807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2311;AVGPOST=0.9961;RSQ=0.9912;ERATE=0.0008;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 21187069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7968;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21187121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2738;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0007;THETA=0.0008;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 21187150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0228;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0003;THETA=0.0021;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21187151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0159;AVGPOST=0.9963;RSQ=0.8978;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21187171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0435;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21187350 rs112231691 GT G 7081 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0438;AVGPOST=0.9989;RSQ=0.9896;ERATE=0.0005;THETA=0.0011;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21187358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21187499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21187512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21187613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21187750 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21187757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21187851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.5256;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21188025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.5824;AVGPOST=0.9843;RSQ=0.9735;ERATE=0.0027;THETA=0.0003;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 21188249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0353;AVGPOST=0.9980;RSQ=0.9813;ERATE=0.0006;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 21188300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0004;THETA=0.0012;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21188305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21188307 . T TG 1302 PASS INDEL;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0413;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 21188339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7868;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21188670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2705;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 21188681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9362;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21188924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21188964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5753;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21188995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0222;AVGPOST=0.9974;RSQ=0.9503;ERATE=0.0004;THETA=0.0027;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21188996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8603;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21189016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0235;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0003;THETA=0.0012;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21189032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4987;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21189038 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3978;AVGPOST=0.9893;RSQ=0.9841;ERATE=0.0005;THETA=0.0007;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 21189123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2610;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 21189145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4793;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21189179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21189348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21189361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9300;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21189498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21189670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1587;AVGPOST=0.9941;RSQ=0.9834;ERATE=0.0006;THETA=0.0004;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 21189719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0725;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0004;THETA=0.0011;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 21189727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21189783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0097;AVGPOST=0.9988;RSQ=0.9483;ERATE=0.0005;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21189818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21189890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21190054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21190059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21190172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21190190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3971;AVGPOST=0.9945;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 21190214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21190325 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21190468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0617;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 21190781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.9692;AVGPOST=0.9910;RSQ=0.8936;ERATE=0.0005;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 21190805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9717;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21190806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6675;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21190928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0411;AVGPOST=0.9966;RSQ=0.9714;ERATE=0.0004;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 21191014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9721;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21191019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0682;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21191068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21191173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9026;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21191202 . C CA 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7090;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21191267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9567;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21191270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21191287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21191292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21191390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0614;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0010;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21191397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9659;ERATE=0.0003;THETA=0.0028;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21191413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8128;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21191423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21191462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9105;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21191699 rs34909480 GC G 2435 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0203;AVGPOST=0.9970;RSQ=0.9390;ERATE=0.0004;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21191739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.887;LDAF=0.0215;AVGPOST=0.9963;RSQ=0.9277;ERATE=0.0008;THETA=0.0049;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21191766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.2869;AVGPOST=0.9777;RSQ=0.9687;ERATE=0.0158;THETA=0.0007;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 21191893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0009;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21191968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21192013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0277;AVGPOST=0.9961;RSQ=0.9451;ERATE=0.0004;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21192134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2646;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0008;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 21192166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5406;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21192227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21192328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8433;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21192439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2624;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 21192485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2635;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 21192658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2639;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0009;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 21192679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21192793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2637;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0010;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 21192873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21192897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2638;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0009;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 21192918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0745;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 21192938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21193011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21193145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21193151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21193242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0809;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 21193413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9247;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21193675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6794;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21193685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21193839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21193845 . TC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7199;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21193987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21193997 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4933;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21194032 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21194157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21194311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8419;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21194410 . TC T 1063 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0079;AVGPOST=0.9979;RSQ=0.8933;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21194411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21194686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6680;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21194687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21194800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3319;ERATE=0.0003;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21194949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5314;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21194995 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5437;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21195153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21195329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8289;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21195349 rs71581097 A AC 4272 PASS INDEL;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0463;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21195484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21195493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0052;AVGPOST=0.9972;RSQ=0.7769;ERATE=0.0009;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21195532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21195602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4395;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21195676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0464;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0004;THETA=0.0008;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21195743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21195874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7591;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21195922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21195930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21196015 . C CA 287 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5167;ERATE=0.0013;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21196026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3794;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21196467 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0301;AVGPOST=0.9992;RSQ=0.9894;ERATE=0.0004;THETA=0.0012;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21196563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21196648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8391;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21196684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5793;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21196769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0462;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21196901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0072;AVGPOST=0.9977;RSQ=0.8881;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21197181 rs72403637 AAAAC A 6190 PASS INDEL;BAVGPOST=0.992;BRSQ=0.900;LDAF=0.0423;AVGPOST=0.9979;RSQ=0.9811;ERATE=0.0004;THETA=0.0011;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 21197319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8843;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21197336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21197343 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8704;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21197577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21197715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21197770 . CTTG C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21197926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7077;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21198021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4487;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21198356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0391;AVGPOST=0.9854;RSQ=0.8489;ERATE=0.0005;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21198391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4487;ERATE=0.0013;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21198589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.696;LDAF=0.0146;AVGPOST=0.9864;RSQ=0.6572;ERATE=0.0022;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21198636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0462;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21198661 . TTTTA T 445 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5302;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21198834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21198900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21198910 . CAG C 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8642;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21199053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21199312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4245;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21199330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7052;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21199377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7516;ERATE=0.0010;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21199425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9544;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21199436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.565;LDAF=0.0208;AVGPOST=0.9742;RSQ=0.5161;ERATE=0.0049;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21199482 . TA T 178 PASS INDEL;BAVGPOST=0.989;BRSQ=0.611;LDAF=0.0175;AVGPOST=0.9951;RSQ=0.8835;ERATE=0.0007;THETA=0.0021;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21199501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0059;AVGPOST=0.9916;RSQ=0.4840;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21199507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.470;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6221;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21199525 . AC A 43 PASS INDEL;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7926;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21199662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5641;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21200160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9076;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21200164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0839;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0009;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 21200182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7967;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21200232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8673;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21200276 . TG T 6077 PASS INDEL;BAVGPOST=0.897;BRSQ=0.203;LDAF=0.8673;AVGPOST=0.7968;RSQ=0.2555;ERATE=0.0241;THETA=0.0021;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 21200448 rs71741361 GC G 20048 PASS INDEL;BAVGPOST=0.992;BRSQ=0.190;LDAF=0.9791;AVGPOST=0.9617;RSQ=0.2625;ERATE=0.0026;THETA=0.0015;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 21200449 . T TG 19219 PASS INDEL;BAVGPOST=0.992;BRSQ=0.030;LDAF=0.9798;AVGPOST=0.9691;RSQ=0.3465;ERATE=0.0026;THETA=0.0022;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 21200468 . G GC 22741 PASS INDEL;BAVGPOST=0.971;BRSQ=0.197;LDAF=0.9696;AVGPOST=0.9503;RSQ=0.3081;ERATE=0.0037;THETA=0.0011;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 21200482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6107;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21200595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2141;AVGPOST=0.9958;RSQ=0.9916;ERATE=0.0006;THETA=0.0006;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 21200725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0430;AVGPOST=0.9921;RSQ=0.9383;ERATE=0.0009;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21200819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0027;AVGPOST=0.9952;RSQ=0.3191;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21200845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.494;LDAF=0.0073;AVGPOST=0.9916;RSQ=0.5182;ERATE=0.0009;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21200875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0199;AVGPOST=0.9984;RSQ=0.9646;ERATE=0.0004;THETA=0.0016;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21200920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4286;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21200924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21201221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21201288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21201315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0008;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21201467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21201545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21201552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8961;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21201568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8356;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21201680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21201726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21201752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2147;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0003;THETA=0.0010;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 21201924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21202067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21202209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0244;AVGPOST=0.9973;RSQ=0.9620;ERATE=0.0005;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21202267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3498;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21202415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.540;LDAF=0.0028;AVGPOST=0.9955;RSQ=0.3239;ERATE=0.0007;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21202449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0044;AVGPOST=0.9941;RSQ=0.4248;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21202465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21202637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5199;ERATE=0.0006;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21202734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21202885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21202931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21202969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21203096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21203158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21203355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21203378 . G GT 69 PASS INDEL;BAVGPOST=0.988;BRSQ=0.522;LDAF=0.0174;AVGPOST=0.9778;RSQ=0.5048;ERATE=0.0053;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21203605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9260;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21203669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21203715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.743;LDAF=0.0343;AVGPOST=0.9716;RSQ=0.6704;ERATE=0.0085;THETA=0.0018;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21203796 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5169;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21203816 . G GACC 5189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9817;ERATE=0.0003;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21203840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1035;AVGPOST=0.9963;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 21203861 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0015;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21203925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21203982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21203985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5936;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21203988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.9006;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21203989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.580;LDAF=0.0045;AVGPOST=0.9941;RSQ=0.4769;ERATE=0.0013;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21204022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4739;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8684;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21204031 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21204053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.620;LDAF=0.0237;AVGPOST=0.9767;RSQ=0.6104;ERATE=0.0051;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21204054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7508;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21204064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9176;ERATE=0.0006;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21204073 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0127;AVGPOST=0.9972;RSQ=0.8955;ERATE=0.0006;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21204086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4008;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21204271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6773;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21204285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6634;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21204391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9206;ERATE=0.0004;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21204648 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0242;AVGPOST=0.9988;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21204745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21204786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1163;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 21204798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7989;AVGPOST=0.9961;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 21204807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21204849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8277;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21204906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.740;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7775;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21205028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0235;AVGPOST=0.9975;RSQ=0.9550;ERATE=0.0005;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21205030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21205201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0034;AVGPOST=0.9956;RSQ=0.5131;ERATE=0.0007;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21205219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6103;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21205377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21205569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1129;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0011;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 21205637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21205694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0066;AVGPOST=0.9946;RSQ=0.7048;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21205888 . AGTGTGTGTGTAT A 704 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8261;ERATE=0.0006;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21206103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9751;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21206120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7676;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21206245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1269;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 21206287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4753;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21206332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0153;AVGPOST=0.9981;RSQ=0.9435;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21206333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7714;AVGPOST=0.9930;RSQ=0.9844;ERATE=0.0010;THETA=0.0004;AC=1687;AN=2184 GT:DS:GL:BD 0.77243590 1
1 21206473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0219;AVGPOST=0.9984;RSQ=0.9680;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21206474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0303;AVGPOST=0.9989;RSQ=0.9856;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21206513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.712;LDAF=0.0762;AVGPOST=0.9685;RSQ=0.8528;ERATE=0.0009;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 21206630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.710;LDAF=0.0806;AVGPOST=0.9639;RSQ=0.8347;ERATE=0.0011;THETA=0.0008;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21206631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.884;LDAF=0.7372;AVGPOST=0.9342;RSQ=0.8807;ERATE=0.0088;THETA=0.0005;AC=1649;AN=2184 GT:DS:GL:BD 0.75503665 1
1 21206654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.867;LDAF=0.1438;AVGPOST=0.9864;RSQ=0.9570;ERATE=0.0017;THETA=0.0010;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 21206755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.793;LDAF=0.0280;AVGPOST=0.9945;RSQ=0.9112;ERATE=0.0009;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21206794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8864;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21207044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1132;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 21207078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7056;ERATE=0.0007;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21207110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.3929;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21207188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5723;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0008;THETA=0.0007;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 21207298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207307 . T TG 34 PASS INDEL;BAVGPOST=0.997;BRSQ=0.657;LDAF=0.0064;AVGPOST=0.9949;RSQ=0.6952;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21207382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.906;LDAF=0.0758;AVGPOST=0.9862;RSQ=0.9271;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 21207407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6462;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.831;LDAF=0.0364;AVGPOST=0.9833;RSQ=0.8208;ERATE=0.0011;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21207585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.909;LDAF=0.1753;AVGPOST=0.9675;RSQ=0.9206;ERATE=0.0013;THETA=0.0007;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 21207731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1145;AVGPOST=0.9948;RSQ=0.9801;ERATE=0.0009;THETA=0.0007;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 21207817 . T TA 616 PASS INDEL;BAVGPOST=0.957;BRSQ=0.490;LDAF=0.0986;AVGPOST=0.8718;RSQ=0.4154;ERATE=0.0181;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 21207900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21207952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1186;AVGPOST=0.9945;RSQ=0.9806;ERATE=0.0009;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 21208039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6848;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21208270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.560;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8816;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21208325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1130;AVGPOST=0.9968;RSQ=0.9872;ERATE=0.0006;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21208429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0220;AVGPOST=0.9983;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21208549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.5914;AVGPOST=0.9862;RSQ=0.9792;ERATE=0.0013;THETA=0.0008;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 21208596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8916;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21208654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0165;AVGPOST=0.9945;RSQ=0.8636;ERATE=0.0008;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21208685 . A AG 1420 PASS INDEL;BAVGPOST=0.994;BRSQ=0.913;LDAF=0.0345;AVGPOST=0.9907;RSQ=0.9082;ERATE=0.0007;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21208722 . AAG A 1456 PASS INDEL;BAVGPOST=0.931;BRSQ=0.747;LDAF=0.1794;AVGPOST=0.8772;RSQ=0.6784;ERATE=0.0197;THETA=0.0007;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 21208725 . A AG 1582 PASS INDEL;BAVGPOST=0.977;BRSQ=0.864;LDAF=0.0923;AVGPOST=0.9736;RSQ=0.8978;ERATE=0.0009;THETA=0.0006;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 21208731 . AG A 805 PASS INDEL;BAVGPOST=0.977;BRSQ=0.866;LDAF=0.1074;AVGPOST=0.9588;RSQ=0.8488;ERATE=0.0053;THETA=0.0007;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 21208736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.748;LDAF=0.1688;AVGPOST=0.8961;RSQ=0.7060;ERATE=0.0319;THETA=0.0008;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 21208737 . G GA 318 PASS INDEL;BAVGPOST=0.986;BRSQ=0.683;LDAF=0.0371;AVGPOST=0.9650;RSQ=0.6181;ERATE=0.0068;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21208742 . A AG 1620 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21208746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21208761 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1134;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21208785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21208933 . C CT 81 PASS INDEL;BAVGPOST=0.987;BRSQ=0.566;LDAF=0.0253;AVGPOST=0.9785;RSQ=0.6683;ERATE=0.0022;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21208957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1114;AVGPOST=0.9961;RSQ=0.9849;ERATE=0.0004;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 21208966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1272;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 21208976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21209002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6505;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21209018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0077;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21209051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21209090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21209100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21209183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21209187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9394;ERATE=0.0002;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21209197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21209296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7875;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21209393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7405;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21209451 . TGA T 165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6756;ERATE=0.0005;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21209546 . AC A 1535 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0119;AVGPOST=0.9992;RSQ=0.9708;ERATE=0.0003;THETA=0.0068;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21209567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0130;AVGPOST=0.9975;RSQ=0.9211;ERATE=0.0007;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21209591 rs67228042 CT C 206 PASS INDEL;BAVGPOST=0.970;BRSQ=0.498;LDAF=0.0833;AVGPOST=0.8958;RSQ=0.4393;ERATE=0.0133;THETA=0.0072;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21209604 . T TA 2038 PASS INDEL;BAVGPOST=0.958;BRSQ=0.607;LDAF=0.0960;AVGPOST=0.9059;RSQ=0.5467;ERATE=0.0195;THETA=0.0008;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21209633 rs58681458 T TA 1861 PASS INDEL;BAVGPOST=0.935;BRSQ=0.597;LDAF=0.1369;AVGPOST=0.8680;RSQ=0.5212;ERATE=0.0236;THETA=0.0006;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 21209645 rs58681458 CTA C 353 PASS INDEL;BAVGPOST=0.990;BRSQ=0.537;LDAF=0.0172;AVGPOST=0.9891;RSQ=0.7535;ERATE=0.0010;THETA=0.0038;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21209648 rs58681458 T TA 2238 PASS INDEL;BAVGPOST=0.957;BRSQ=0.625;LDAF=0.0845;AVGPOST=0.9200;RSQ=0.5575;ERATE=0.0192;THETA=0.0042;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 21209658 rs58681458 T TA 1041 PASS INDEL;BAVGPOST=0.979;BRSQ=0.619;LDAF=0.0376;AVGPOST=0.9672;RSQ=0.6329;ERATE=0.0060;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21209662 . T TA 791 PASS INDEL;BAVGPOST=0.988;BRSQ=0.754;LDAF=0.0242;AVGPOST=0.9896;RSQ=0.8299;ERATE=0.0005;THETA=0.0016;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21209670 rs72068660 T TATC 836 PASS INDEL;BAVGPOST=0.957;BRSQ=0.652;LDAF=0.0882;AVGPOST=0.9191;RSQ=0.5794;ERATE=0.0229;THETA=0.0039;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 21209694 rs72068660 C CT 104 PASS INDEL;BAVGPOST=0.995;BRSQ=0.691;LDAF=0.0156;AVGPOST=0.9835;RSQ=0.5943;ERATE=0.0033;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21209701 rs72068660 ATCTG A 200 PASS INDEL;BAVGPOST=0.992;BRSQ=0.632;LDAF=0.0165;AVGPOST=0.9867;RSQ=0.6863;ERATE=0.0024;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21209709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.6108;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21209721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21209813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9736;ERATE=0.0003;THETA=0.0021;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21209891 . CT C 575 PASS INDEL;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8276;ERATE=0.0005;THETA=0.0057;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21209989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21210185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4808;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21210212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8868;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21210299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6102;ERATE=0.0008;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21210677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.928;LDAF=0.0500;AVGPOST=0.9932;RSQ=0.9427;ERATE=0.0004;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 21210717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8895;ERATE=0.0004;THETA=0.0036;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21210733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0002;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21210775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7561;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21210875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211038 . TG T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4975;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0073;AVGPOST=0.9978;RSQ=0.8869;ERATE=0.0004;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21211149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8854;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21211151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9351;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21211152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0002;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21211194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0049;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21211326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9270;ERATE=0.0003;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21211364 . GAGA G 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9579;ERATE=0.0002;THETA=0.0046;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21211458 . CATG C 311 PASS INDEL;BAVGPOST=0.990;BRSQ=0.634;LDAF=0.0197;AVGPOST=0.9789;RSQ=0.5544;ERATE=0.0064;THETA=0.0034;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21211465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21211479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21211525 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0997;AVGPOST=0.9982;RSQ=0.9911;ERATE=0.0002;THETA=0.0018;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 21211611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0002;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21211628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0137;AVGPOST=0.9987;RSQ=0.9585;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21211635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0002;THETA=0.0018;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21211643 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21211653 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21211657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7676;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 21211679 . G GCTT 70824 PASS INDEL;BAVGPOST=0.982;BRSQ=0.950;LDAF=0.7784;AVGPOST=0.9688;RSQ=0.9250;ERATE=0.0085;THETA=0.0003;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 21212114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.7190;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21212143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0070;AVGPOST=0.9971;RSQ=0.8541;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21212175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21212186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0090;AVGPOST=0.9965;RSQ=0.8434;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21212190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0135;AVGPOST=0.9982;RSQ=0.9361;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21212214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1971;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 21212294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1977;AVGPOST=0.9969;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 21212318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4562;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21212516 . TTTG T 302 PASS INDEL;BAVGPOST=0.996;BRSQ=0.590;LDAF=0.0113;AVGPOST=0.9894;RSQ=0.6372;ERATE=0.0016;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21212564 . G GA 792 PASS INDEL;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0122;AVGPOST=0.9889;RSQ=0.6491;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21212644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4932;ERATE=0.0002;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21212742 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21212801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1983;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0005;THETA=0.0010;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 21212881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21212963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1984;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 21213019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.8112;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21213021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9467;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21213094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21213193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7438;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21213268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21213333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.830;LDAF=0.0297;AVGPOST=0.9877;RSQ=0.8491;ERATE=0.0005;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21213360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1947;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 21213383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9187;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21213391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21213394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0104;AVGPOST=0.9981;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21213415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1856;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 21213445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4883;AVGPOST=0.9963;RSQ=0.9949;ERATE=0.0011;THETA=0.0005;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 21213612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6254;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21213805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21213936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9435;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21213979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9252;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21214003 . TCAC T 44 PASS INDEL;BAVGPOST=0.995;BRSQ=0.655;LDAF=0.0150;AVGPOST=0.9809;RSQ=0.5169;ERATE=0.0029;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21214386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1966;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 21214395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9456;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21214401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6888;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21214561 . GC G 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5396;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21214643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5964;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21214690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9029;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21214717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0181;AVGPOST=0.9973;RSQ=0.9545;ERATE=0.0004;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21214728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6701;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21214823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9240;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21214968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9514;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21215008 . T TA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.498;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.5584;ERATE=0.0012;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21215090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21215226 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21215298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21215440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9528;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21215449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21215451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21215777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21215944 . TAC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5066;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21216182 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21216190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8963;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21216399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21216489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0832;AVGPOST=0.9986;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 21216969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21217204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21217314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7040;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21217433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21217565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21217611 rs35435522 TG T 36896 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3498;AVGPOST=0.9958;RSQ=0.9934;ERATE=0.0006;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21217706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7452;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21217732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21218031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0036;AVGPOST=0.9954;RSQ=0.5378;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21218144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8982;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21218212 rs9286937 C CT 970 PASS INDEL;BAVGPOST=0.729;BRSQ=0.291;LDAF=0.2984;AVGPOST=0.6906;RSQ=0.3698;ERATE=0.0388;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 21218249 rs35647305 TCAA T 26817 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1973;AVGPOST=0.9909;RSQ=0.9795;ERATE=0.0011;THETA=0.0006;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 21218309 rs35647305 C CA 11 PASS INDEL;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0060;AVGPOST=0.9943;RSQ=0.6404;ERATE=0.0013;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21218310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21218332 . C CT 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21218374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9820;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21218397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5955;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21218601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21218645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0109;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21218710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21218767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4264;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21218905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0060;AVGPOST=0.9991;RSQ=0.9370;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21218912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9351;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21219019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21219054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5356;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6831;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219117 rs67310825 T TA 17731 PASS INDEL;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3527;AVGPOST=0.9877;RSQ=0.9815;ERATE=0.0017;THETA=0.0005;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 21219226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21219301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9989;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21219381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0256;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0022;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21219533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21219579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7637;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21219697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21219706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0518;AVGPOST=0.9991;RSQ=0.9929;ERATE=0.0004;THETA=0.0019;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 21219714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0431;AVGPOST=0.9980;RSQ=0.9833;ERATE=0.0005;THETA=0.0011;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21219728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21219733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5740;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6696;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8791;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21219896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6310;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21219897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4595;ERATE=0.0006;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21219956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.708;LDAF=0.0082;AVGPOST=0.9928;RSQ=0.6465;ERATE=0.0020;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21220006 . A AC 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21220065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.773;LDAF=0.0109;AVGPOST=0.9946;RSQ=0.8068;ERATE=0.0004;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21220077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0005;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21220084 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7897;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21220262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7766;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21220299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21220435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9159;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21220438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5548;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21220621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21220677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9005;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21221041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21221189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21221610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21221783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21221787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5085;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21221848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6051;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21222135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7139;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21222588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21222611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21222629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.4564;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21222812 . TAAG T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7106;ERATE=0.0006;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21222946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.840;LDAF=0.1578;AVGPOST=0.9472;RSQ=0.8482;ERATE=0.0015;THETA=0.0011;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 21223014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.426;LDAF=0.0035;AVGPOST=0.9945;RSQ=0.3742;ERATE=0.0012;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21223240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0069;AVGPOST=0.9917;RSQ=0.5054;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21223242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21223305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21223464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6836;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21223492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.502;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7980;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21223498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0533;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0015;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21223510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9348;ERATE=0.0004;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21223556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0006;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21223608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9273;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21223862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9993;RSQ=0.9919;ERATE=0.0004;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21224148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5920;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21224151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9194;ERATE=0.0004;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21224155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21224418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3928;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21224445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.2428;AVGPOST=0.9941;RSQ=0.9882;ERATE=0.0005;THETA=0.0008;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 21224489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21224491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7104;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21224504 . C CA 72 PASS INDEL;BAVGPOST=0.985;BRSQ=0.506;LDAF=0.0352;AVGPOST=0.9513;RSQ=0.4438;ERATE=0.0093;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21224659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7317;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21224778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0048;AVGPOST=0.9955;RSQ=0.6038;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21224808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.9096;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21224809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9625;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21224891 . A AC 116 PASS INDEL;BAVGPOST=0.995;BRSQ=0.372;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4492;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21225082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7041;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21225175 . C CT 26 PASS INDEL;BAVGPOST=0.989;BRSQ=0.426;LDAF=0.0198;AVGPOST=0.9693;RSQ=0.3915;ERATE=0.0034;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21225187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.929;LDAF=0.0326;AVGPOST=0.9977;RSQ=0.9695;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21225248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6891;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21225398 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8694;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21225499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7288;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21225647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7573;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21225655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9191;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21225720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21225733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9513;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21225835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21225892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9285;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21225910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2551;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0009;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 21225936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8207;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21226020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21226026 . T TCC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21226069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21226085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21226123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21226395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21226506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21226676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9007;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21226725 . TG T 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21226806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2144;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 21226826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9421;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21226849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.539;LDAF=0.0183;AVGPOST=0.9793;RSQ=0.5765;ERATE=0.0067;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21226949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8597;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21226955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0311;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21226966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21226967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0204;AVGPOST=0.9984;RSQ=0.9700;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21227009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2147;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21227111 rs58929138 A AC 1226 PASS INDEL;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0257;AVGPOST=0.9897;RSQ=0.8261;ERATE=0.0006;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21227375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8753;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21227384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9589;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21227388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6568;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21227472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21227510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21227630 . T TA 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21227764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8555;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21227824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6473;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21227869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3416;AVGPOST=0.9962;RSQ=0.9928;ERATE=0.0005;THETA=0.0011;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 21227950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.4112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21228224 . CG C 579 PASS INDEL;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0074;AVGPOST=0.9969;RSQ=0.8621;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21228260 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21228279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21228464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21228492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7732;ERATE=0.0009;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21228518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0116;AVGPOST=0.9981;RSQ=0.9400;ERATE=0.0004;THETA=0.0048;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21228541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7254;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21228548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3990;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21228552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9569;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21228647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21228676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21228703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9452;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21228759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9747;ERATE=0.0004;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21228833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7342;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21228909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8020;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21228990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6097;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21229185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21229212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21229253 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9618;ERATE=0.0003;THETA=0.0013;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21229255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0112;AVGPOST=0.9965;RSQ=0.8776;ERATE=0.0003;THETA=0.0085;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21229263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5058;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21229265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.956;LDAF=0.0947;AVGPOST=0.9941;RSQ=0.9744;ERATE=0.0005;THETA=0.0132;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 21229296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.952;LDAF=0.3609;AVGPOST=0.9679;RSQ=0.9589;ERATE=0.0011;THETA=0.0028;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 21229462 rs75183052 CCCCCCG C 1839 PASS INDEL;BAVGPOST=0.627;BRSQ=0.346;LDAF=0.4541;AVGPOST=0.6422;RSQ=0.3734;ERATE=0.0320;THETA=0.0061;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 21229562 rs75183052 CCCCCG C 3691 PASS INDEL;BAVGPOST=0.564;BRSQ=0.101;LDAF=0.6969;AVGPOST=0.6702;RSQ=0.3428;ERATE=0.0179;THETA=0.0093;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 21229563 rs75183052 CCCG C 1853 PASS INDEL;BAVGPOST=0.603;BRSQ=0.309;LDAF=0.4834;AVGPOST=0.6610;RSQ=0.4452;ERATE=0.0227;THETA=0.0014;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 21229565 rs75183052 CCGCCG C 1068 PASS INDEL;BAVGPOST=0.633;BRSQ=0.367;LDAF=0.4517;AVGPOST=0.7682;RSQ=0.6154;ERATE=0.0074;THETA=0.0071;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 21229566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.904;LDAF=0.3402;AVGPOST=0.9403;RSQ=0.8996;ERATE=0.0045;THETA=0.0209;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 21229652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8289;ERATE=0.0003;THETA=0.0136;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21229748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0172;AVGPOST=0.9977;RSQ=0.9561;ERATE=0.0003;THETA=0.0229;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21229954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.968;LDAF=0.1991;AVGPOST=0.9863;RSQ=0.9693;ERATE=0.0006;THETA=0.0082;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 21230006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0452;AVGPOST=0.9978;RSQ=0.9809;ERATE=0.0003;THETA=0.0071;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21230040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21230141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8232;ERATE=0.0004;THETA=0.0053;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21230180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21230186 . CTTT C 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0006;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21230249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21230500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4797;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21230515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0004;THETA=0.0089;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21230534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8504;ERATE=0.0004;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21230541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0363;AVGPOST=0.9965;RSQ=0.9620;ERATE=0.0005;THETA=0.0021;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 21230549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1508;AVGPOST=0.9940;RSQ=0.9832;ERATE=0.0004;THETA=0.0021;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 21230571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0053;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21230653 . CCT C 1424 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0113;AVGPOST=0.9988;RSQ=0.9579;ERATE=0.0003;THETA=0.0067;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21230761 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9172;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21230910 rs10695302 C CTGTT 45460 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1427;AVGPOST=0.9965;RSQ=0.9903;ERATE=0.0005;THETA=0.0011;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 21230944 . G GTT 15610 PASS INDEL;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1420;AVGPOST=0.9963;RSQ=0.9899;ERATE=0.0005;THETA=0.0039;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 21230946 . GTGTT G 2475 PASS INDEL;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9737;ERATE=0.0004;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21230980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0135;AVGPOST=0.9992;RSQ=0.9750;ERATE=0.0003;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21231044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0970;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0003;THETA=0.0064;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 21231045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1476;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0099;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 21231065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9472;ERATE=0.0003;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21231169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8620;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21231339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9553;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21231369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21231389 rs34010947 T TG 15088 PASS INDEL;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1304;AVGPOST=0.9934;RSQ=0.9785;ERATE=0.0005;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 21231410 . G GT 2979 PASS INDEL;BAVGPOST=0.988;BRSQ=0.950;LDAF=0.1305;AVGPOST=0.9918;RSQ=0.9736;ERATE=0.0006;THETA=0.0034;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 21231413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0066;AVGPOST=0.9969;RSQ=0.8207;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21231441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9989;RSQ=0.9722;ERATE=0.0003;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21231520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3076;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0010;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 21231570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1468;AVGPOST=0.9988;RSQ=0.9959;ERATE=0.0004;THETA=0.0042;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 21231652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21231824 . AG A 1269 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9588;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21231841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21231843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1471;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21231897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232096 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1473;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1475;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 21232192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1473;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21232346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1472;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0005;THETA=0.0011;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21232400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1473;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0007;THETA=0.0009;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0297;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21232587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232651 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21232707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1473;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21232924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21232925 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9322;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21232954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1473;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0005;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21232996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3133;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 21233119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1476;AVGPOST=0.9976;RSQ=0.9923;ERATE=0.0006;THETA=0.0005;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 21233191 . AC A 599 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9528;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21233197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1481;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 21233219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3089;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 21233273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0438;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 21233282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6083;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0694;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 21233407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21233547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1018;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 21233606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21233689 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1472;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21233710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9366;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21233720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9169;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21233774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1520;AVGPOST=0.9981;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 21233788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0114;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21233795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21233857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1294;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 21233863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1473;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 21233923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0177;AVGPOST=0.9969;RSQ=0.9378;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21233961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0323;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21233967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5677;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21233990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3086;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 21234017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21234033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21234068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4922;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21234086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9288;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21234199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1430;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 21234227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7796;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21234253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.532;LDAF=0.0109;AVGPOST=0.9878;RSQ=0.5747;ERATE=0.0017;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21234373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5885;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21234432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1100;AVGPOST=0.9978;RSQ=0.9923;ERATE=0.0004;THETA=0.0015;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 21234453 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21234459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21234470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6523;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21234499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21234615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21234630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21234648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21234706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4798;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21234759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1885;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 21234775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21234833 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21234857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.639;LDAF=0.0065;AVGPOST=0.9946;RSQ=0.6377;ERATE=0.0009;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21234951 rs57814804 A AAAAAC 780 PASS INDEL;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0169;AVGPOST=0.9875;RSQ=0.7179;ERATE=0.0017;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21235079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21235216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8432;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21235255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4753;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21235284 . A AC 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5426;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21235635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7277;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21235638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21235724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0019;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21235788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6020;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21235930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0018;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21235940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21235995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9291;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21236117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7996;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21236133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8232;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21236339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21236561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21236564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21236709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.851;LDAF=0.0318;AVGPOST=0.9925;RSQ=0.9051;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21236897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0094;AVGPOST=0.9987;RSQ=0.9532;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21236921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9250;ERATE=0.0004;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21236976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7844;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21236977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9332;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21237102 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21237127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21237476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0801;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0003;THETA=0.0012;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21237490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21237521 . A AT 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4105;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21237677 rs113979800 TC T 2734 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21237684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5315;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21237700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0789;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0011;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 21237739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0715;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0009;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21237742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0082;AVGPOST=0.9946;RSQ=0.7712;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21238139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5431;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21238152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21238259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21238318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21238458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21238487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8892;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21238505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21238525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21238594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1898;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 21238608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1891;AVGPOST=0.9961;RSQ=0.9918;ERATE=0.0005;THETA=0.0007;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 21238628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9816;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21238630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8728;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21238711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9190;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21238726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8192;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21238727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21238820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21239061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6793;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21239249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0094;AVGPOST=0.9978;RSQ=0.9046;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21239333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.614;LDAF=0.0328;AVGPOST=0.9704;RSQ=0.6425;ERATE=0.0090;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21239407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0202;AVGPOST=0.9945;RSQ=0.8915;ERATE=0.0007;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21239498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9186;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21239526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8388;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21239726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.965;LDAF=0.7981;AVGPOST=0.9688;RSQ=0.9369;ERATE=0.0047;THETA=0.0005;AC=1765;AN=2184 GT:DS:GL:BD 0.80815017 1
1 21239820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4314;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21239956 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8513;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21239976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8907;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21240004 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21240070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.6952;ERATE=0.0005;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21240120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21240262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9761;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21240394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21240433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21240572 rs66760404 TTTTTGTTTTG T 91231 PASS INDEL;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.7848;AVGPOST=0.9518;RSQ=0.9055;ERATE=0.0098;THETA=0.0010;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 21240589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21240804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7102;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21240834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.554;LDAF=0.0044;AVGPOST=0.9959;RSQ=0.6126;ERATE=0.0006;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21240875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6141;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21240876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.8987;AVGPOST=0.9965;RSQ=0.9894;ERATE=0.0004;THETA=0.0009;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 21240891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0090;AVGPOST=0.9985;RSQ=0.9293;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21240895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8546;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21240921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21241190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21241196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9226;ERATE=0.0004;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21241211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8187;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21241283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8732;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21241284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21241536 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9687;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21241790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21241812 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8450;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21241845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21241859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0670;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 21241895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4543;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21242005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6337;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21242049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21242216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4765;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21242217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21242471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8719;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21242490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21242513 . CAGAG C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21242724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21242774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7331;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21242838 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5923;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21242848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7039;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21243237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6605;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21243362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21243419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21243629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21243633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5852;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21243715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9210;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21243737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21243934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21243983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4155;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0008;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 21244030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0143;AVGPOST=0.9989;RSQ=0.9668;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21244289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21244363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21244423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6151;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21244464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21244479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6434;AVGPOST=0.9963;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 21244495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9682;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21244572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21244617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21244637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0388;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21244664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8982;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21244667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21244683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21244698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21244766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21244769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6367;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21244775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21244893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0358;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 21244900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9994;RSQ=0.9695;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21244940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21244951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0054;AVGPOST=0.9979;RSQ=0.8372;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21245077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21245189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21245381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21245408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7545;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21245469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21245470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245593 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21245594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0308;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21245598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4492;AVGPOST=0.9941;RSQ=0.9907;ERATE=0.0007;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 21245687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9424;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21245798 . AT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6217;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21245822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.831;LDAF=0.0187;AVGPOST=0.9929;RSQ=0.8524;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21245910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21246014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7367;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21246269 . ACTGTC A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3717;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21246400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21246439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0036;AVGPOST=0.9936;RSQ=0.3223;ERATE=0.0010;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21246497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.874;LDAF=0.5734;AVGPOST=0.8978;RSQ=0.8475;ERATE=0.0213;THETA=0.0004;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 21246543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8180;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21246639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6633;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21246652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21246778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8120;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21246798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1105;AVGPOST=0.9979;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 21246978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21247178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9353;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21247337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.3836;AVGPOST=0.9787;RSQ=0.9646;ERATE=0.0043;THETA=0.0004;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 21247370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0252;AVGPOST=0.9985;RSQ=0.9777;ERATE=0.0005;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21247407 . CTT C 10201 PASS INDEL;BAVGPOST=0.985;BRSQ=0.915;LDAF=0.0940;AVGPOST=0.9937;RSQ=0.9713;ERATE=0.0004;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 21247491 . TTA T 1240 PASS INDEL;BAVGPOST=0.981;BRSQ=0.888;LDAF=0.0936;AVGPOST=0.9930;RSQ=0.9688;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 21247494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0004;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21247503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21247563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21248095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0127;AVGPOST=0.9973;RSQ=0.9172;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21248126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5231;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21248218 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.535;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6835;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21248276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0248;AVGPOST=0.9984;RSQ=0.9695;ERATE=0.0006;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21248374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21248421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0239;AVGPOST=0.9981;RSQ=0.9680;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21248429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8167;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21248446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21248628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21248639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21248696 . A AT 646 PASS INDEL;BAVGPOST=0.993;BRSQ=0.789;LDAF=0.0247;AVGPOST=0.9863;RSQ=0.7979;ERATE=0.0008;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21248794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.846;LDAF=0.1424;AVGPOST=0.9511;RSQ=0.8483;ERATE=0.0012;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 21248988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.757;LDAF=0.0335;AVGPOST=0.9793;RSQ=0.7846;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21249076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9506;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21249220 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9223;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21249280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3006;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 21249332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0128;AVGPOST=0.9983;RSQ=0.9474;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21249345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7984;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21249356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9582;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21249567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21249714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21249719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21249724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5897;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21249751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3022;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 21249791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3860;AVGPOST=0.9935;RSQ=0.9893;ERATE=0.0010;THETA=0.0003;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 21249869 rs11374483 A AG 46447 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3008;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0012;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 21249997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21250124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21250150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21250217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3005;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0027;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 21250239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4247;AVGPOST=0.9953;RSQ=0.9918;ERATE=0.0009;THETA=0.0003;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 21250276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3008;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0009;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 21250288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21250352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21250421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.7399;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21250496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21250498 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21250514 . AT A 1688 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21250596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21250638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8255;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21250690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9253;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21250701 . AC A 125 PASS INDEL;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4889;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21250776 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21250933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21251010 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21251116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9342;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21251137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0209;AVGPOST=0.9970;RSQ=0.9355;ERATE=0.0008;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21251236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0295;AVGPOST=0.9984;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21251261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0121;AVGPOST=0.9957;RSQ=0.8459;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21251268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2906;AVGPOST=0.9945;RSQ=0.9894;ERATE=0.0010;THETA=0.0004;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 21251324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2839;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 21251407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.7129;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21251454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2843;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 21251473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9293;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21251534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6678;ERATE=0.0013;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21251706 . GAAC G 705 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9483;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21251770 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.898;LDAF=0.3592;AVGPOST=0.9321;RSQ=0.8891;ERATE=0.0128;THETA=0.0005;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 21251868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21251922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5041;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21251982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5111;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21252025 . TAG T 4396 PASS INDEL;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0227;AVGPOST=0.9956;RSQ=0.9158;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21252205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.935;LDAF=0.0282;AVGPOST=0.9948;RSQ=0.9276;ERATE=0.0004;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21252246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21252289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21252372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2839;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 21252487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.5064;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21252494 . CTT C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6955;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21252641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2836;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 21252652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0148;AVGPOST=0.9943;RSQ=0.8572;ERATE=0.0004;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21252655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7994;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21252738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21252755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9982;RSQ=0.9238;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21252775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21252816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21252917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21252923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2838;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 21252991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6629;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21253108 . C CT 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5863;ERATE=0.0005;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21253110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8083;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21253171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0048;AVGPOST=0.9964;RSQ=0.7209;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21253219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7317;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21253318 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6607;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21253356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2512;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 21253413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2880;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 21253454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2815;AVGPOST=0.9969;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 21253545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21253553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2801;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 21253597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7070;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21253598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2801;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 21253623 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21253748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21253760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9493;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21253776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21254127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6088;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21254229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.828;LDAF=0.0865;AVGPOST=0.9634;RSQ=0.8103;ERATE=0.0211;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 21254824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8373;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21255028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6424;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21255029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0072;AVGPOST=0.9972;RSQ=0.8254;ERATE=0.0011;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21255043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.647;LDAF=0.0057;AVGPOST=0.9939;RSQ=0.5923;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21255584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8258;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21255595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6900;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21255748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7153;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 21255799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8624;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21255832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0242;AVGPOST=0.9992;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21255871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21255881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5898;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21255892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7133;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21255919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0277;AVGPOST=0.9961;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21255948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21255991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21256020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8384;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21256022 . ATGT A 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8962;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21256044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21256084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21256166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21256227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.9980;AVGPOST=0.9983;RSQ=0.6260;ERATE=0.0005;THETA=0.0005;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 21256332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7503;ERATE=0.0008;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21256363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21256365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21256368 . C CGATT 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5392;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21256371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9354;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21256497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21256653 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4098;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21256654 . T TCCCTGC 938 PASS INDEL;BAVGPOST=0.986;BRSQ=0.488;LDAF=0.0197;AVGPOST=0.9955;RSQ=0.9021;ERATE=0.0005;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21256688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21256762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0287;AVGPOST=0.9980;RSQ=0.9725;ERATE=0.0003;THETA=0.0022;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21256824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0305;AVGPOST=0.9981;RSQ=0.9759;ERATE=0.0004;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21256950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21257052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5498;ERATE=0.0008;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21257058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.953;LDAF=0.4018;AVGPOST=0.9672;RSQ=0.9527;ERATE=0.0026;THETA=0.0003;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 21257151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9273;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21257178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0316;AVGPOST=0.9987;RSQ=0.9833;ERATE=0.0005;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21257186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7150;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 21257188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4735;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21257208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.763;LDAF=0.0210;AVGPOST=0.9870;RSQ=0.7510;ERATE=0.0043;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21257335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7723;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21257559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.920;LDAF=0.0714;AVGPOST=0.9621;RSQ=0.8034;ERATE=0.0023;THETA=0.0011;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 21257710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0033;AVGPOST=0.9958;RSQ=0.4992;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21257901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.772;LDAF=0.0315;AVGPOST=0.9969;RSQ=0.9628;ERATE=0.0005;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21258026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8325;ERATE=0.0008;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21258034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5624;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21258178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.916;LDAF=0.1837;AVGPOST=0.9574;RSQ=0.8938;ERATE=0.0033;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 21258190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.5562;AVGPOST=0.9918;RSQ=0.9870;ERATE=0.0007;THETA=0.0019;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 21258252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8797;ERATE=0.0005;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21258320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6659;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21258353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21258365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21258404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.776;LDAF=0.0271;AVGPOST=0.9790;RSQ=0.7203;ERATE=0.0073;THETA=0.0016;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21258445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1061;AVGPOST=0.9970;RSQ=0.9896;ERATE=0.0005;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 21258448 . CT C 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6786;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21258486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21258497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21258537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0228;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0003;THETA=0.0024;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21258641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21258716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21258754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0288;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0004;THETA=0.0037;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21258812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9497;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 21259039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9443;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21259049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21259141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5404;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21259169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7382;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21259278 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8615;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21259434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5701;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21259795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21260162 . CT C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21260164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3833;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21260290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21260394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5993;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21260516 . G GT 780 PASS INDEL;BAVGPOST=0.995;BRSQ=0.739;LDAF=0.0109;AVGPOST=0.9940;RSQ=0.8107;ERATE=0.0007;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21260575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8588;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21260592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5147;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21260625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4816;AVGPOST=0.9872;RSQ=0.9831;ERATE=0.0019;THETA=0.0005;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 21260654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5565;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21260712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4397;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 21260828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.896;LDAF=0.0467;AVGPOST=0.9974;RSQ=0.9783;ERATE=0.0004;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21260950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3036;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21260991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8390;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21260998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3328;AVGPOST=0.9953;RSQ=0.9930;ERATE=0.0007;THETA=0.0010;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 21261076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1094;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0005;THETA=0.0027;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 21261106 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0041;AVGPOST=0.9947;RSQ=0.5373;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21261311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4810;AVGPOST=0.9888;RSQ=0.9856;ERATE=0.0009;THETA=0.0008;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 21261511 . T TA 55 PASS INDEL;BAVGPOST=0.992;BRSQ=0.525;LDAF=0.0127;AVGPOST=0.9862;RSQ=0.5999;ERATE=0.0014;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21261516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1569;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0004;THETA=0.0010;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 21261542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21261603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6354;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21261733 . ATACT A 255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8421;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21261840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8818;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21261843 . C CTTAT 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.4959;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21261843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9258;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21261864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4439;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21261865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.6153;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21261989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21262010 . TTTTTC T 219 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21262025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5137;AVGPOST=0.9941;RSQ=0.9920;ERATE=0.0006;THETA=0.0007;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 21262157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6594;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21262190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7776;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21262223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6103;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21262237 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6100;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21262245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21262302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21262431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21262566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21262568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21262603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3308;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 21262643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21262730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21262739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9240;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21262940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3285;AVGPOST=0.9952;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 21263003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0270;AVGPOST=0.9984;RSQ=0.9803;ERATE=0.0004;THETA=0.0040;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21263179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1565;AVGPOST=0.9968;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 21263187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4718;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21263416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6370;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21263430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9657;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21263461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21263480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.522;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4645;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21263499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0115;AVGPOST=0.9996;RSQ=0.9852;ERATE=0.0003;THETA=0.0056;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21263524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0082;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21263665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1068;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 21263694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21263829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0231;AVGPOST=0.9988;RSQ=0.9790;ERATE=0.0004;THETA=0.0018;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21263905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9778;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21264104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21264111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8530;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21264142 . TGGAGAA T 448 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264152 . G GAT 664 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.9126;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21264213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1523;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 21264239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1067;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0009;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 21264326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0459;AVGPOST=0.9990;RSQ=0.9897;ERATE=0.0005;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 21264370 . C CA 37 PASS INDEL;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.6892;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21264383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3406;AVGPOST=0.9892;RSQ=0.9834;ERATE=0.0011;THETA=0.0020;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 21264407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6528;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21264529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0584;AVGPOST=0.9915;RSQ=0.9412;ERATE=0.0038;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 21264545 . G GA 66 PASS INDEL;BAVGPOST=0.993;BRSQ=0.542;LDAF=0.0133;AVGPOST=0.9846;RSQ=0.5426;ERATE=0.0031;THETA=0.0029;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21264552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0067;AVGPOST=0.9962;RSQ=0.8016;ERATE=0.0009;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21264575 . GTTTTC G 219 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6265;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264587 . C CT 10523 PASS INDEL;BAVGPOST=0.883;BRSQ=0.786;LDAF=0.3645;AVGPOST=0.8662;RSQ=0.7888;ERATE=0.0354;THETA=0.0017;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 21264635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.957;LDAF=0.5086;AVGPOST=0.9822;RSQ=0.9760;ERATE=0.0011;THETA=0.0041;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 21264646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0003;THETA=0.0044;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21264804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9220;ERATE=0.0004;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21264812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8889;ERATE=0.0005;THETA=0.0067;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21264935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5213;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21264988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21265086 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21265203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21265220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0171;AVGPOST=0.9990;RSQ=0.9777;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21265255 . A ATG 212 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21265269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5292;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0008;THETA=0.0005;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 21265285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21265326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21265405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21265452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21265516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5302;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 21265541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0404;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21265581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6045;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21265636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8296;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21265712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0086;AVGPOST=0.9994;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21265748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21265760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21265761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21265842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.890;LDAF=0.0274;AVGPOST=0.9947;RSQ=0.9214;ERATE=0.0005;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21265922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21265963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0294;AVGPOST=0.9987;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21265974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5745;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 21266013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1648;AVGPOST=0.9976;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 21266036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21266088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21266159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21266256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21266265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7079;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5744;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0013;THETA=0.0002;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 21266434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21266741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5755;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 21266750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5752;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0002;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 21266808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21266872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21266915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21267002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4161;AVGPOST=0.9951;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 21267004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21267503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9636;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21267531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21267632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9656;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21267672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21267698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21267784 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8795;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21267800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21267843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21267960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21268043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21268105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9383;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21268216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9167;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21268234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8182;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 21268246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4643;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21268310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21268422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21268464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0289;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21268469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5720;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 21268488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1619;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 21268537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6352;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21268580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7090;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21268587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21268810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21268832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7938;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21268833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0243;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21268856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21268879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21268909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21269002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21269338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0296;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21269377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9985;RSQ=0.9478;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21269416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5536;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0005;THETA=0.0048;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 21269533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21269558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0398;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21269573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8835;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21269594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5528;AVGPOST=0.9863;RSQ=0.9796;ERATE=0.0039;THETA=0.0005;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 21269615 . A AG 27345 PASS INDEL;BAVGPOST=0.968;BRSQ=0.921;LDAF=0.7832;AVGPOST=0.9480;RSQ=0.8926;ERATE=0.0138;THETA=0.0017;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 21269718 rs61193550 G GA 84894 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.8194;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 21269719 . CAT C 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7148;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21269758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9549;ERATE=0.0003;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21269804 . GC G 3199 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0499;AVGPOST=0.9971;RSQ=0.9763;ERATE=0.0004;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 21269827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5596;AVGPOST=0.9969;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 21269847 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8191;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 21269869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5592;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 21269881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0027;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21269907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21269995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9255;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21270055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7337;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21270073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21270119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21270186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21270266 . AAAG A 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21270551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9151;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21270657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21270854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.505;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5964;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21271210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.4357;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21271324 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21271358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8699;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21271410 . G GCGA 153 PASS INDEL;BAVGPOST=0.997;BRSQ=0.230;LDAF=0.0178;AVGPOST=0.9761;RSQ=0.4894;ERATE=0.0017;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21272305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21272375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21272408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21272412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21272582 . TTTG T 1323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0143;AVGPOST=0.9974;RSQ=0.9276;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21272661 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21272860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21272923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21272976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.9693;AVGPOST=0.9935;RSQ=0.9213;ERATE=0.0005;THETA=0.0004;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 21273127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21273210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21273217 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21273222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2558;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 21273272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5852;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8330;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21273411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0376;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 21273482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21273551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21273611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21273612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21273755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21273909 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21274028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9214;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21274088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0132;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21274121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8982;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274155 . TGAA T 2472 PASS INDEL;BAVGPOST=0.995;BRSQ=0.912;LDAF=0.0236;AVGPOST=0.9968;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21274168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4693;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21274238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5612;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274373 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4863;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7642;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21274680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21274739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7297;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21274833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21274959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7714;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21275061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6603;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21275064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9280;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21275181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7302;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21275192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7541;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21275207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3181;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0008;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 21275363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21275445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21275501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21275606 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7058;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21275709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6485;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21275730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21275859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21275860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0704;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 21275913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9758;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21275986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21276034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21276153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7774;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21276164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0105;AVGPOST=0.9920;RSQ=0.6909;ERATE=0.0007;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21276446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3188;AVGPOST=0.9917;RSQ=0.9849;ERATE=0.0016;THETA=0.0003;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 21276479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6678;AVGPOST=0.9954;RSQ=0.9916;ERATE=0.0007;THETA=0.0005;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 21276541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3250;AVGPOST=0.9767;RSQ=0.9626;ERATE=0.0043;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 21276675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9953;RSQ=0.5595;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21276736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.8994;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21276749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4010;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21276757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21276834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9288;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21276865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8447;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21276873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4043;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21276889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.513;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5759;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21276904 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0722;AVGPOST=0.9969;RSQ=0.9846;ERATE=0.0005;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21276905 . AAAAAG A 31516 PASS INDEL;BAVGPOST=0.980;BRSQ=0.964;LDAF=0.3268;AVGPOST=0.9915;RSQ=0.9868;ERATE=0.0009;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 21276953 . AAAAG A 1290 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0094;AVGPOST=0.9976;RSQ=0.8857;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21276961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9127;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21277000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21277178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9146;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21277224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21277281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21277284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8918;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21277285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6715;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0007;THETA=0.0004;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 21277298 rs113375204 A ACT 46520 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3389;AVGPOST=0.9941;RSQ=0.9902;ERATE=0.0014;THETA=0.0005;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 21277407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3253;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 21277539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9595;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21277548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21277578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0109;AVGPOST=0.9974;RSQ=0.8998;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21277639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.537;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5920;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21277785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8915;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21277824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9260;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21277961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6709;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 21277985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21278005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0171;AVGPOST=0.9975;RSQ=0.9471;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21278007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9739;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21278263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7877;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21278264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21278305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7104;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21278354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9652;ERATE=0.0011;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21278368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7730;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21278410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3671;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21278490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0161;AVGPOST=0.9985;RSQ=0.9618;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21278491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6655;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21278546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3229;AVGPOST=0.9941;RSQ=0.9905;ERATE=0.0008;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 21278571 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9427;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21278660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6000;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21278669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7491;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21278811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21278888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9986;RSQ=0.2731;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21278991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21279010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6784;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21279045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0141;AVGPOST=0.9968;RSQ=0.9020;ERATE=0.0008;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21279121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6699;AVGPOST=0.9938;RSQ=0.9893;ERATE=0.0008;THETA=0.0002;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 21279230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2161;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 21279339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3392;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 21279377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6700;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 21279466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8368;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21279468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0098;AVGPOST=0.9979;RSQ=0.9215;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21279485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7897;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21279493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0731;AVGPOST=0.9976;RSQ=0.9867;ERATE=0.0006;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 21279644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0090;AVGPOST=0.9923;RSQ=0.6540;ERATE=0.0007;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21279664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.4320;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21279665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.554;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6603;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21279729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2160;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0007;THETA=0.0005;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 21279770 . G GGC 729 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9968;RSQ=0.8209;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21279792 . AG A 540 PASS INDEL;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9522;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21279801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21279870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21279900 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21279911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21279935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21280058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21280110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21280141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21280159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0105;AVGPOST=0.9946;RSQ=0.7955;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21280194 . CA C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5108;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21280204 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21280265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5867;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21280316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1464;AVGPOST=0.9918;RSQ=0.9733;ERATE=0.0017;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 21280631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.947;LDAF=0.1864;AVGPOST=0.9748;RSQ=0.9399;ERATE=0.0030;THETA=0.0020;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 21280715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.409;LDAF=0.0069;AVGPOST=0.9920;RSQ=0.4903;ERATE=0.0016;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21280717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.492;LDAF=0.0083;AVGPOST=0.9926;RSQ=0.6516;ERATE=0.0007;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21280928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.7466;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21280946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8494;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21280988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.598;LDAF=0.0118;AVGPOST=0.9884;RSQ=0.6231;ERATE=0.0008;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21281004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21281105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21281258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6186;ERATE=0.0007;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21281387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9487;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21281392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21281418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7956;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21281490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21281656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0280;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21281846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21281855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9169;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21282143 . TA T 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6102;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21282228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4808;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21282330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0014;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21282334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21282335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8877;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21282374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0039;AVGPOST=0.9964;RSQ=0.5927;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21282608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5835;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21282631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4763;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21282633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21282734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.0065;AVGPOST=0.9961;RSQ=0.7835;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21282749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1319;AVGPOST=0.9977;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 21282803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8843;ERATE=0.0006;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21282887 . TG T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.493;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.3555;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21282892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9005;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21283061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21283356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21283374 rs35518074 TC T 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4281;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21283489 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4656;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21283542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8369;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21283585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6397;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21283594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1338;AVGPOST=0.9970;RSQ=0.9897;ERATE=0.0007;THETA=0.0005;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 21283644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21283711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.887;LDAF=0.0845;AVGPOST=0.9873;RSQ=0.9413;ERATE=0.0006;THETA=0.0008;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 21283841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21283847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5004;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21283870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5936;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21284054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8319;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21284105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1354;AVGPOST=0.9974;RSQ=0.9921;ERATE=0.0004;THETA=0.0032;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 21284142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0004;THETA=0.0038;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21284255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21284325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.4834;AVGPOST=0.9902;RSQ=0.9855;ERATE=0.0007;THETA=0.0005;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 21284354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8110;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21284362 rs35427811 ATC A 4455 PASS INDEL;BAVGPOST=0.966;BRSQ=0.912;LDAF=0.2403;AVGPOST=0.9696;RSQ=0.9375;ERATE=0.0031;THETA=0.0005;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 21284412 rs35427811 TCTC T 29785 PASS INDEL;BAVGPOST=0.982;BRSQ=0.962;LDAF=0.2552;AVGPOST=0.9903;RSQ=0.9812;ERATE=0.0007;THETA=0.0008;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 21284413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9593;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21284498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21284506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21284510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21284623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21284661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6849;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21284709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0010;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21284717 . CTTG C 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5458;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21284742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0010;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21284745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8677;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21284828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21284963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9039;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21285049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1613;AVGPOST=0.9981;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 21285230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21285233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21285294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8650;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21285386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1915;AVGPOST=0.9969;RSQ=0.9915;ERATE=0.0011;THETA=0.0012;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 21285423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21285516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7138;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21285688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9510;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21285795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5079;AVGPOST=0.9971;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 21285859 . T TC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21285930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6342;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21285979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.2896;AVGPOST=0.9958;RSQ=0.9915;ERATE=0.0008;THETA=0.0004;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 21286199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.611;LDAF=0.9911;AVGPOST=0.9896;RSQ=0.5764;ERATE=0.0014;THETA=0.0006;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 21286318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8356;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21286407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21286498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7141;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21286590 . AG A 352 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21286670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7246;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21286674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9381;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21286932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21287025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3232;AVGPOST=0.9929;RSQ=0.9880;ERATE=0.0008;THETA=0.0005;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 21287182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.6007;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21287191 . T TC 520 PASS INDEL;BAVGPOST=0.932;BRSQ=0.370;LDAF=0.0782;AVGPOST=0.9114;RSQ=0.5435;ERATE=0.0103;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 21287435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7772;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21287488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21287519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21287596 . A AATAT 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21287724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21287742 . GT G 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21287979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0049;AVGPOST=0.9974;RSQ=0.8128;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21288071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6603;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21288241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21288326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21288368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21288489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7263;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21288498 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6054;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21288521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7509;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21288572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21288648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6940;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21288762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5049;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 21288764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0086;AVGPOST=0.9956;RSQ=0.8223;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21288776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3300;AVGPOST=0.9959;RSQ=0.9923;ERATE=0.0007;THETA=0.0029;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 21288991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5611;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21289130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8234;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21289131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5059;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 21289132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21289209 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0077;AVGPOST=0.9964;RSQ=0.8201;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21289237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9681;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21289295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5320;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21289722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21289844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6254;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21289856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21289931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7349;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21290111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9972;RSQ=0.8463;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21290177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8259;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21290185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8869;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21290286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8560;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 21290358 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21290368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6598;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21290429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21290446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4516;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21290452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.949;LDAF=0.3827;AVGPOST=0.9393;RSQ=0.9007;ERATE=0.0196;THETA=0.0009;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 21290526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4989;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21290609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.889;LDAF=0.9328;AVGPOST=0.9457;RSQ=0.7434;ERATE=0.0115;THETA=0.0004;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 21290618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0061;AVGPOST=0.9959;RSQ=0.7397;ERATE=0.0036;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21290754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8358;ERATE=0.0009;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21290829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.549;LDAF=0.0072;AVGPOST=0.9948;RSQ=0.6858;ERATE=0.0006;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21290938 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21291131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21291186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21291187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21291272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21291344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0009;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21291367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21291416 . TG T 40 PASS INDEL;BAVGPOST=0.984;BRSQ=0.054;LDAF=0.0547;AVGPOST=0.9260;RSQ=0.4718;ERATE=0.0028;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21291422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21291425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1684;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 21291582 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.788;LDAF=0.0173;AVGPOST=0.9861;RSQ=0.6917;ERATE=0.0070;THETA=0.0076;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21291618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21291641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.717;LDAF=0.0314;AVGPOST=0.9694;RSQ=0.6137;ERATE=0.0072;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21291728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5846;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 21292025 . GA G 63 PASS INDEL;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0079;AVGPOST=0.9934;RSQ=0.6723;ERATE=0.0023;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21292624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21292656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21292657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.382;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6477;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21292763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21292824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21292932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21292943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21293126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21293216 . TG T 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7617;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21293239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21293259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8289;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21293336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0384;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 21293391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21293397 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21293504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21293511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21293566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21293601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0004;THETA=0.0046;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21293645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8529;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21293647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21293708 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21293904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9199;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21294029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21294053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21294194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21294196 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21294303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21294323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21294326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21294344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21294352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21294365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21294371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21294377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21294684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1709;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0003;THETA=0.0012;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 21294745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4734;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21294754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21294796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8833;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21295055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0370;AVGPOST=0.9976;RSQ=0.9785;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21295108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0013;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21295161 rs71679484 TC T 40 PASS INDEL;BAVGPOST=0.995;BRSQ=0.709;LDAF=0.0157;AVGPOST=0.9860;RSQ=0.6384;ERATE=0.0048;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21295253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21295425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21295584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21296010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9161;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21296270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21296835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.763;LDAF=0.0088;AVGPOST=0.9960;RSQ=0.8139;ERATE=0.0006;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21296998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0118;AVGPOST=0.9913;RSQ=0.7116;ERATE=0.0012;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21297040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.735;LDAF=0.0249;AVGPOST=0.9831;RSQ=0.7178;ERATE=0.0015;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21297349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.881;LDAF=0.0742;AVGPOST=0.9612;RSQ=0.7812;ERATE=0.0024;THETA=0.0014;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 21297465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.887;LDAF=0.4165;AVGPOST=0.9620;RSQ=0.9378;ERATE=0.0016;THETA=0.0006;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 21297466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.3029;AVGPOST=0.9753;RSQ=0.9548;ERATE=0.0029;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 21298102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2972;AVGPOST=0.9667;RSQ=0.9379;ERATE=0.0042;THETA=0.0013;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 21298235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2151;AVGPOST=0.9947;RSQ=0.9878;ERATE=0.0009;THETA=0.0007;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21298288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21298523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21298645 . CT C 1125 PASS INDEL;BAVGPOST=0.952;BRSQ=0.853;LDAF=0.1997;AVGPOST=0.9756;RSQ=0.9421;ERATE=0.0013;THETA=0.0004;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 21298725 rs67410140 TC T 23798 PASS INDEL;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.2132;AVGPOST=0.9944;RSQ=0.9881;ERATE=0.0003;THETA=0.0025;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 21298727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9597;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21298745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21298879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6550;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21298904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21299133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0041;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21299141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21299221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3561;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 21299289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3809;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21299294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3559;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 21299450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21299461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21299485 . GAA G 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6382;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21299524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0161;AVGPOST=0.9983;RSQ=0.9639;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21299555 . C CT 187 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4910;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21299627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21299662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21299692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21299930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21300123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3919;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21300446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21300728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5552;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21300764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21301058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21301076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4667;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21301127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21301181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21301618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0186;AVGPOST=0.9976;RSQ=0.9471;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21301644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21301771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6270;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21301973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21302017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21302234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5978;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 21302418 . C CA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4391;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21302581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6814;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21302611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8009;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21302685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8618;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21302886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21303069 . GT G 1491 PASS INDEL;BAVGPOST=0.992;BRSQ=0.822;LDAF=0.0118;AVGPOST=0.9970;RSQ=0.8989;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21303070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0521;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 21303102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9751;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0002;THETA=0.0004;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 21303286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21303304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1390;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0002;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 21303370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21303429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21303503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21303554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.9096;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21303602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6857;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21303637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7329;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21303643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7302;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21303806 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21303915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21303964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21304227 . A AG 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21304299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21304421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21304448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21304453 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21304480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7234;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21304486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3364;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 21304539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0731;AVGPOST=0.9979;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 21304559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21304691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9455;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21304724 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7257;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21304740 . GTA G 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6673;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21304804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5087;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21304968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21304987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21304996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21305131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8018;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21305197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21305292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5736;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21305486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4678;ERATE=0.0005;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21305764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3153;AVGPOST=0.9923;RSQ=0.9867;ERATE=0.0009;THETA=0.0010;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 21305835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8390;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21305899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21305917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6581;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21306012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21306075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9211;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21306428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9978;RSQ=0.9162;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21306624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0033;AVGPOST=0.9958;RSQ=0.5815;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21306676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4743;AVGPOST=0.9962;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 21306872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4754;AVGPOST=0.9960;RSQ=0.9946;ERATE=0.0004;THETA=0.0009;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 21306885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8043;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21307183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9072;ERATE=0.0008;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21307286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4778;AVGPOST=0.9978;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 21307346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21307410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1566;AVGPOST=0.9914;RSQ=0.9803;ERATE=0.0016;THETA=0.0005;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 21307576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1556;AVGPOST=0.9978;RSQ=0.9937;ERATE=0.0006;THETA=0.0006;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 21307733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8773;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21307891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7850;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21307969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6054;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21308152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.715;LDAF=0.0501;AVGPOST=0.9548;RSQ=0.6077;ERATE=0.0176;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21308258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0170;AVGPOST=0.9991;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21308507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21308624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21308643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21308716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21308741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21309145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3185;AVGPOST=0.9961;RSQ=0.9930;ERATE=0.0008;THETA=0.0004;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 21309257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6370;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21309305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7930;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21309490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21309556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1553;AVGPOST=0.9965;RSQ=0.9910;ERATE=0.0006;THETA=0.0018;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 21309639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21309859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21309891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21309903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.520;LDAF=0.0101;AVGPOST=0.9866;RSQ=0.4853;ERATE=0.0027;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21310137 . AAG A 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0056;AVGPOST=0.9939;RSQ=0.5537;ERATE=0.0009;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21310166 . G GA 701 PASS INDEL;BAVGPOST=0.878;BRSQ=0.381;LDAF=0.1837;AVGPOST=0.7889;RSQ=0.4005;ERATE=0.0482;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 21310176 . G GA 168 PASS INDEL;BAVGPOST=0.990;BRSQ=0.519;LDAF=0.0216;AVGPOST=0.9732;RSQ=0.4902;ERATE=0.0053;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21310184 . AAG A 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.446;LDAF=0.0063;AVGPOST=0.9926;RSQ=0.5179;ERATE=0.0011;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21310198 rs5774064 A AAG 337 PASS INDEL;BAVGPOST=0.981;BRSQ=0.552;LDAF=0.0490;AVGPOST=0.9372;RSQ=0.4591;ERATE=0.0107;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21310202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7523;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21310259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21310307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21310383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9392;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21310433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21310466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21310734 . TTTTTA T 862 PASS INDEL;BAVGPOST=0.986;BRSQ=0.575;LDAF=0.0182;AVGPOST=0.9857;RSQ=0.7133;ERATE=0.0008;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21310821 . T TA 73 PASS INDEL;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0080;AVGPOST=0.9936;RSQ=0.6696;ERATE=0.0011;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21310822 . CT C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3966;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21310960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4703;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21310967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9185;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21311017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21311077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21311205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21311233 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21311298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21311329 rs74260640 CAT C 4932 PASS INDEL;BAVGPOST=0.992;BRSQ=0.811;LDAF=0.0208;AVGPOST=0.9929;RSQ=0.8617;ERATE=0.0007;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21311382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0581;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0002;THETA=0.0009;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 21311555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21311568 . GATCAA G 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.7269;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21311581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6943;ERATE=0.0002;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21311782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0002;THETA=0.0010;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21311799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21311885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0002;THETA=0.0019;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21311931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21312055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21312113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8193;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21312140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0012;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 21312315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21312516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9184;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21312720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0960;AVGPOST=0.9973;RSQ=0.9886;ERATE=0.0005;THETA=0.0016;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 21312960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8874;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21313049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21313222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6658;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21313234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.4873;ERATE=0.0005;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21313272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9202;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21313592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0177;AVGPOST=0.9984;RSQ=0.9606;ERATE=0.0003;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21313689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21313728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21313844 . ATAG A 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0002;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21313939 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21314153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6079;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21314158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6225;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21314283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21314286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21314407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6772;ERATE=0.0004;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21314455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5273;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21314517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7895;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21314598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8916;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21314659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7454;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21314818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0238;AVGPOST=0.9992;RSQ=0.9867;ERATE=0.0002;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21314888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21314926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9646;ERATE=0.0002;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21315059 . TCTC T 1005 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9895;ERATE=0.0002;THETA=0.0026;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21315164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21315191 . T TTTC 61341 PASS INDEL;BAVGPOST=0.985;BRSQ=0.651;LDAF=0.9680;AVGPOST=0.9688;RSQ=0.6287;ERATE=0.0025;THETA=0.0010;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 21315249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.342;LDAF=0.0051;AVGPOST=0.9944;RSQ=0.5404;ERATE=0.0013;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21315268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0246;AVGPOST=0.9993;RSQ=0.9880;ERATE=0.0003;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21315372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4626;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21315381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0222;AVGPOST=0.9989;RSQ=0.9770;ERATE=0.0005;THETA=0.0016;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21315452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8963;ERATE=0.0003;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21315477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8602;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21315541 . TA T 101 PASS INDEL;BAVGPOST=0.974;BRSQ=0.477;LDAF=0.0482;AVGPOST=0.9415;RSQ=0.5054;ERATE=0.0080;THETA=0.0009;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21315615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21315687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0278;AVGPOST=0.9984;RSQ=0.9742;ERATE=0.0004;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21315706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.759;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.4602;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21315731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8076;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21315764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0088;AVGPOST=0.9979;RSQ=0.9114;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21315780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0002;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21315801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7564;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21315854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8962;ERATE=0.0002;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21315967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21316070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21316075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9782;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21316085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0513;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 21316168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9992;RSQ=0.9905;ERATE=0.0002;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21316178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21316241 . C CAG 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0042;AVGPOST=0.9948;RSQ=0.5104;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21316269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21316386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0563;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 21316504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0527;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0002;THETA=0.0011;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 21316627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21316679 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8169;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21316826 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21316832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4710;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21316837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7418;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21316936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21316988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9596;ERATE=0.0002;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21317060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9827;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21317174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21317283 . AG A 211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21317332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21317440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21317592 . AT A 213 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6204;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21317613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21317628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21317629 . TTTA T 707 PASS INDEL;BAVGPOST=0.997;BRSQ=0.681;LDAF=0.0061;AVGPOST=0.9950;RSQ=0.6730;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21317724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4046;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21317768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21318069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0074;AVGPOST=0.9967;RSQ=0.8118;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21318133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0401;AVGPOST=0.9981;RSQ=0.9839;ERATE=0.0004;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21318183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3858;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21318201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6889;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21318226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8559;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21318309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7227;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21318395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.9072;ERATE=0.0004;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21318542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21318559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9398;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21318641 . CAT C 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9967;RSQ=0.4231;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21318696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9985;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21318723 . A AC 773 PASS INDEL;BAVGPOST=0.986;BRSQ=0.828;LDAF=0.0609;AVGPOST=0.9750;RSQ=0.8329;ERATE=0.0018;THETA=0.0008;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21318812 . C CG 4671 PASS INDEL;BAVGPOST=0.995;BRSQ=0.929;LDAF=0.0410;AVGPOST=0.9977;RSQ=0.9780;ERATE=0.0003;THETA=0.0013;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21318814 . CAA C 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9360;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21318984 . C CTT 6854 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0405;AVGPOST=0.9986;RSQ=0.9846;ERATE=0.0003;THETA=0.0010;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21319117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21319132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0287;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0004;THETA=0.0013;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21319166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21319184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21319238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0164;AVGPOST=0.9986;RSQ=0.9617;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21319335 rs71577260 C CT 2110 PASS INDEL;BAVGPOST=0.889;BRSQ=0.566;LDAF=0.1732;AVGPOST=0.8566;RSQ=0.6058;ERATE=0.0382;THETA=0.0010;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 21319386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.719;LDAF=0.0690;AVGPOST=0.9649;RSQ=0.7858;ERATE=0.0053;THETA=0.0028;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21319395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.680;LDAF=0.1990;AVGPOST=0.8733;RSQ=0.6649;ERATE=0.0439;THETA=0.0007;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 21319399 . CT C 9261 PASS INDEL;BAVGPOST=0.997;BRSQ=0.373;LDAF=0.9965;AVGPOST=0.9941;RSQ=0.3226;ERATE=0.0009;THETA=0.0009;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 21319477 . CT C 8853 PASS INDEL;BAVGPOST=0.994;BRSQ=0.472;LDAF=0.9819;AVGPOST=0.9739;RSQ=0.4264;ERATE=0.0037;THETA=0.0008;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 21319479 rs58313402 TC T 673 PASS INDEL;BAVGPOST=0.899;BRSQ=0.374;LDAF=0.1668;AVGPOST=0.7931;RSQ=0.3863;ERATE=0.0383;THETA=0.0014;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 21319480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9340;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21319592 . AG A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4596;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21319613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6621;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21319780 . C CT 90 PASS INDEL;BAVGPOST=0.984;BRSQ=0.429;LDAF=0.0382;AVGPOST=0.9567;RSQ=0.5372;ERATE=0.0074;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21319785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21319936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21319952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0366;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0002;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21320094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9906;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21320161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7999;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21320311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21320502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21320579 . AAAAGG A 420 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9974;RSQ=0.9053;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21320595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0404;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0002;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21320604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21320766 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.1477;AVGPOST=0.9886;RSQ=0.9683;ERATE=0.0007;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 21320903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6166;ERATE=0.0003;THETA=0.0061;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21320909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8775;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21320918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0119;AVGPOST=0.9965;RSQ=0.8964;ERATE=0.0002;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21320951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8449;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21321004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0203;AVGPOST=0.9956;RSQ=0.9247;ERATE=0.0003;THETA=0.0059;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21321032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0380;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0023;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 21321110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8551;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21321119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21321222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21321282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21321368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21321384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21321430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8627;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21321452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21321489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.5172;ERATE=0.0008;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21321519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21321521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.4610;AVGPOST=0.9845;RSQ=0.9775;ERATE=0.0009;THETA=0.0009;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 21321555 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21321775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21321778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21321947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0368;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4554;AVGPOST=0.9866;RSQ=0.9812;ERATE=0.0011;THETA=0.0018;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 21322079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=0.9990;RSQ=0.9899;ERATE=0.0003;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21322105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0002;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0167;AVGPOST=0.9968;RSQ=0.9258;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21322167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0002;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21322190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9229;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21322244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.720;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21322299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0367;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0373;AVGPOST=0.9985;RSQ=0.9830;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9989;RSQ=0.9887;ERATE=0.0003;THETA=0.0018;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 21322448 . AG A 274 PASS INDEL;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5971;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21322480 . T TG 304 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0043;AVGPOST=0.9960;RSQ=0.5981;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21322514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0393;AVGPOST=0.9985;RSQ=0.9864;ERATE=0.0003;THETA=0.0015;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21322567 rs35825782 CT C 30230 PASS INDEL;BAVGPOST=0.971;BRSQ=0.950;LDAF=0.3609;AVGPOST=0.9691;RSQ=0.9502;ERATE=0.0008;THETA=0.0019;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 21322612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0411;AVGPOST=0.9976;RSQ=0.9760;ERATE=0.0004;THETA=0.0016;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21322679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0368;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0081;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21322761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0003;THETA=0.0112;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21322840 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2871;ERATE=0.0004;THETA=0.0067;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21323044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8382;ERATE=0.0004;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21323504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8132;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21323548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8678;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21323555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0369;AVGPOST=0.9984;RSQ=0.9805;ERATE=0.0005;THETA=0.0039;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21323575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21323583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0003;THETA=0.0081;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21323715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21323796 . AGTG A 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4067;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21323866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.913;LDAF=0.1190;AVGPOST=0.9707;RSQ=0.8996;ERATE=0.0048;THETA=0.0033;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 21324499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4699;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7452;ERATE=0.0004;THETA=0.0081;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21324641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8085;ERATE=0.0003;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21324714 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.937;LDAF=0.0763;AVGPOST=0.9889;RSQ=0.9507;ERATE=0.0029;THETA=0.0031;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 21324744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5248;ERATE=0.0002;THETA=0.0206;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324751 . CT C 151 PASS INDEL;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5459;ERATE=0.0007;THETA=0.0170;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21324857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4098;ERATE=0.0005;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21324859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0309;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21324973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0003;THETA=0.0207;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21325013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.911;LDAF=0.0122;AVGPOST=0.9971;RSQ=0.9042;ERATE=0.0004;THETA=0.0041;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21325096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.939;LDAF=0.5218;AVGPOST=0.9443;RSQ=0.9291;ERATE=0.0075;THETA=0.0033;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 21325151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.961;LDAF=0.4710;AVGPOST=0.9650;RSQ=0.9570;ERATE=0.0008;THETA=0.0019;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 21325191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3799;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21325211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21325241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0099;AVGPOST=0.9972;RSQ=0.8756;ERATE=0.0003;THETA=0.0047;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21325256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0147;AVGPOST=0.9980;RSQ=0.9516;ERATE=0.0004;THETA=0.0060;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21325284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6206;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21325351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0723;AVGPOST=0.9965;RSQ=0.9820;ERATE=0.0004;THETA=0.0009;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 21325371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6919;ERATE=0.0007;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21325403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0743;AVGPOST=0.9966;RSQ=0.9822;ERATE=0.0005;THETA=0.0019;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 21325463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6472;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21325572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0045;AVGPOST=0.9971;RSQ=0.7396;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21325669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0046;AVGPOST=0.9931;RSQ=0.3774;ERATE=0.0013;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21325694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21325794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21325853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21325900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1504;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21325960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0146;AVGPOST=0.9972;RSQ=0.9197;ERATE=0.0009;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21326022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7953;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21326064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1504;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21326119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21326234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21326341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21326359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21326418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0135;AVGPOST=0.9972;RSQ=0.9109;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21326435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8060;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21326436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7502;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21326461 rs10645370 T TGCA 63216 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4654;AVGPOST=0.9935;RSQ=0.9897;ERATE=0.0005;THETA=0.0003;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 21326490 . C CAGT 21262 PASS INDEL;BAVGPOST=0.984;BRSQ=0.978;LDAF=0.4561;AVGPOST=0.9635;RSQ=0.9455;ERATE=0.0086;THETA=0.0005;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 21326492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6436;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 21326563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8449;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21326564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8713;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21326634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8195;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21326776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21326896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1315;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 21327042 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5479;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21327048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1344;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 21327120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6417;AVGPOST=0.9943;RSQ=0.9905;ERATE=0.0012;THETA=0.0010;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 21327302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21327343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21327366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21327432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21327450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8831;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21327719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6808;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21327910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0232;AVGPOST=0.9963;RSQ=0.9455;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21327928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6589;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21328015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21328054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21328163 . C CT 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21328176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6454;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21328260 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21328408 . TC T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5644;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21328449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5767;ERATE=0.0012;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21328452 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21328459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21328496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21328653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21328654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21328741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21328790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21328898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7290;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21329111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8402;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21329117 . CGT C 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.7919;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21329117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9384;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21329118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8892;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21329195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21329420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21329515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21329538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21329597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.473;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.2488;ERATE=0.0006;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21329617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4243;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21329703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4487;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21329926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0191;AVGPOST=0.9973;RSQ=0.9444;ERATE=0.0004;THETA=0.0017;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21329976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21330001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6767;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21330041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1484;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 21330066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1505;AVGPOST=0.9962;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21330152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6385;AVGPOST=0.9940;RSQ=0.9901;ERATE=0.0007;THETA=0.0003;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 21330377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7778;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21330410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1297;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 21330508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21330520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21330535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.903;LDAF=0.3010;AVGPOST=0.9216;RSQ=0.8644;ERATE=0.0129;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 21330747 . TCAAA T 9299 PASS INDEL;BAVGPOST=0.817;BRSQ=0.500;LDAF=0.7211;AVGPOST=0.7552;RSQ=0.4843;ERATE=0.0618;THETA=0.0004;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 21330747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21330882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0004;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21330905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5975;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21330974 rs113329990 AC A 4359 PASS INDEL;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0719;AVGPOST=0.9951;RSQ=0.9776;ERATE=0.0005;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 21331007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5061;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21331087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9013;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21331102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21331182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9401;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21331214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6451;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21331463 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.608;LDAF=0.0138;AVGPOST=0.9826;RSQ=0.5200;ERATE=0.0057;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21331550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9983;RSQ=0.9528;ERATE=0.0004;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21331564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21331597 . AATAG A 970 PASS INDEL;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9395;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21331675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0112;AVGPOST=0.9975;RSQ=0.9204;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21331706 . CT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4189;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21331875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0154;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21332097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21332131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2065;AVGPOST=0.9952;RSQ=0.9887;ERATE=0.0006;THETA=0.0006;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 21332138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9987;RSQ=0.9489;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21332222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6846;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21332266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21332567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8894;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21332583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21332624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0701;AVGPOST=0.9977;RSQ=0.9875;ERATE=0.0007;THETA=0.0020;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 21332644 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6301;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21332727 . G GACAA 34957 PASS INDEL;BAVGPOST=0.880;BRSQ=0.803;LDAF=0.6338;AVGPOST=0.8532;RSQ=0.7858;ERATE=0.0130;THETA=0.0004;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 21332772 . C CAAAT 30035 PASS INDEL;BAVGPOST=0.874;BRSQ=0.796;LDAF=0.5846;AVGPOST=0.7971;RSQ=0.7111;ERATE=0.0412;THETA=0.0010;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 21332774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0466;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0004;THETA=0.0022;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 21333358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21333450 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7947;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21333498 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0030;AVGPOST=0.9958;RSQ=0.4885;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21333518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9259;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21333520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0684;AVGPOST=0.9979;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21333553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0486;AVGPOST=0.9963;RSQ=0.9678;ERATE=0.0003;THETA=0.0009;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21333582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4393;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21333584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4308;ERATE=0.0005;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21333630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21333640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0472;AVGPOST=0.9986;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21333746 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21333777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21333817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7476;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21333842 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0086;AVGPOST=0.9973;RSQ=0.8732;ERATE=0.0005;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21334123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.646;LDAF=0.0131;AVGPOST=0.9944;RSQ=0.8175;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21334153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2091;AVGPOST=0.9860;RSQ=0.9673;ERATE=0.0008;THETA=0.0069;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 21334192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0061;AVGPOST=0.9914;RSQ=0.5080;ERATE=0.0008;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21334403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0226;AVGPOST=0.9866;RSQ=0.7766;ERATE=0.0005;THETA=0.0074;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21334435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9507;ERATE=0.0003;THETA=0.0063;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21334500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21334535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21334656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.765;LDAF=0.0090;AVGPOST=0.9963;RSQ=0.8413;ERATE=0.0005;THETA=0.0093;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21334671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21334798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0029;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21334911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21335042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9574;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21335051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21335052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9548;ERATE=0.0003;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21335126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0519;AVGPOST=0.9950;RSQ=0.9617;ERATE=0.0005;THETA=0.0039;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 21335155 rs57831053 AC A 5544 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0298;AVGPOST=0.9987;RSQ=0.9795;ERATE=0.0006;THETA=0.0018;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21335187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7952;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21335255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21335309 . GA G 136 PASS INDEL;BAVGPOST=0.992;BRSQ=0.562;LDAF=0.0109;AVGPOST=0.9846;RSQ=0.4553;ERATE=0.0034;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21335331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5778;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21335367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21335404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0102;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21335428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8849;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21335469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.3374;AVGPOST=0.9728;RSQ=0.9578;ERATE=0.0081;THETA=0.0078;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 21335506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.8758;ERATE=0.0003;THETA=0.0083;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21335535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21335609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9307;ERATE=0.0007;THETA=0.0117;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21335618 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8586;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21335622 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.2100;AVGPOST=0.9920;RSQ=0.9803;ERATE=0.0018;THETA=0.0021;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 21335642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.8125;AVGPOST=0.9930;RSQ=0.9826;ERATE=0.0006;THETA=0.0066;AC=1774;AN=2184 GT:DS:GL:BD 0.81227106 1
1 21335731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9984;RSQ=0.9810;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21335802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9189;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21335803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21335900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4361;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0009;THETA=0.0005;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 21335974 . TC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4233;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21336014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0430;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21336173 . T TA 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5332;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21336244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21336407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21336482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21336529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21336552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21336557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 21336712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21336760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0897;AVGPOST=0.9985;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 21337039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21337081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0031;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21337140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.8237;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21337157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1272;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 21337244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21337324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1266;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0009;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 21337339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21337344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8043;ERATE=0.0009;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21337354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21337407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0334;AVGPOST=0.9947;RSQ=0.9445;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21337432 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8097;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21337440 . TTGA T 743 PASS INDEL;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.6818;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21337532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0430;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0013;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21337587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21337662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0937;AVGPOST=0.9936;RSQ=0.9724;ERATE=0.0010;THETA=0.0033;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 21337845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21337869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.7985;ERATE=0.0004;THETA=0.0076;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21337885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5149;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21337947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0244;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0004;THETA=0.0098;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21338250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0226;AVGPOST=0.9987;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21338268 . G GGCCCA 2049 PASS INDEL;BAVGPOST=0.980;BRSQ=0.688;LDAF=0.0539;AVGPOST=0.9764;RSQ=0.8260;ERATE=0.0009;THETA=0.0008;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 21338330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7701;ERATE=0.0004;THETA=0.0032;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21338361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.9955;AVGPOST=0.9992;RSQ=0.9317;ERATE=0.0003;THETA=0.0043;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 21338423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0004;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21338507 . C CT 2075 PASS INDEL;BAVGPOST=0.923;BRSQ=0.688;LDAF=0.1811;AVGPOST=0.8465;RSQ=0.5722;ERATE=0.0341;THETA=0.0008;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 21338528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.451;LDAF=0.0061;AVGPOST=0.9920;RSQ=0.5012;ERATE=0.0005;THETA=0.0088;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21338586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.504;LDAF=0.9859;AVGPOST=0.9815;RSQ=0.4673;ERATE=0.0030;THETA=0.0005;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 21338635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6433;ERATE=0.0006;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21338712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7823;ERATE=0.0004;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21338781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9457;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21338811 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7798;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21338814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21338881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4127;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21339014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9400;ERATE=0.0004;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21339054 . GA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7406;ERATE=0.0003;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21339149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4810;AVGPOST=0.9930;RSQ=0.9897;ERATE=0.0005;THETA=0.0006;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 21339219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9513;AVGPOST=0.9986;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 21339240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8311;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21339318 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21339455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21339567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.566;LDAF=0.0149;AVGPOST=0.9836;RSQ=0.6083;ERATE=0.0074;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21339602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21339606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9470;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21339637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21339649 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21339702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8907;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21339838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0964;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 21339882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21340091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9429;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21340144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0010;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21340284 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21340379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9635;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21340469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21340541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1032;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 21340568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21340580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21340599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8901;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21340632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6531;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21340651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21340683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21340724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0681;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21340783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21340795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0073;AVGPOST=0.9970;RSQ=0.8605;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21340801 rs5774357 TAC T 6598 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0402;AVGPOST=0.9979;RSQ=0.9813;ERATE=0.0004;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21340866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6694;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21341099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0192;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0003;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21341112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7213;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21341223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7327;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21341329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0094;AVGPOST=0.9971;RSQ=0.8787;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21341376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4652;ERATE=0.0006;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21341420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.6486;AVGPOST=0.9894;RSQ=0.9826;ERATE=0.0010;THETA=0.0004;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 21341453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.739;LDAF=0.9019;AVGPOST=0.9256;RSQ=0.7019;ERATE=0.0085;THETA=0.0006;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 21341521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.757;LDAF=0.9351;AVGPOST=0.9684;RSQ=0.8085;ERATE=0.0036;THETA=0.0006;AC=2060;AN=2184 GT:DS:GL:BD 0.94322342 1
1 21341559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5407;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21341610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21341669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2187;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 21341831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9074;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21341851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21341884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4051;AVGPOST=0.9958;RSQ=0.9939;ERATE=0.0004;THETA=0.0061;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 21341895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7908;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21342194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6542;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21342301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9406;ERATE=0.0003;THETA=0.0033;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21342362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21342406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0115;AVGPOST=0.9985;RSQ=0.9427;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21342432 . TATAC T 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7774;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21342505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0162;AVGPOST=0.9951;RSQ=0.8812;ERATE=0.0005;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21342510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4100;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0004;THETA=0.0008;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 21342525 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9677;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0004;THETA=0.0006;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 21342571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2216;AVGPOST=0.9949;RSQ=0.9892;ERATE=0.0007;THETA=0.0004;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 21342620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21342621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21342625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21342648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5037;AVGPOST=0.9955;RSQ=0.9928;ERATE=0.0008;THETA=0.0009;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 21342762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21342793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21342846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9450;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21342939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21342998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4501;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21343029 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4556;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21343295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8875;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21343320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21343330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21343515 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0570;AVGPOST=0.9977;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 21343558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9596;AVGPOST=0.9984;RSQ=0.9837;ERATE=0.0004;THETA=0.0007;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 21343580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0223;AVGPOST=0.9963;RSQ=0.9349;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21343685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9320;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21343784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21344057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21344097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.854;LDAF=0.0113;AVGPOST=0.9974;RSQ=0.9069;ERATE=0.0006;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21344098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6945;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21344106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21344133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7368;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21344212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.9584;AVGPOST=0.9967;RSQ=0.9676;ERATE=0.0007;THETA=0.0009;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 21344236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21344250 rs79306522 G GTTGC 123436 PASS INDEL;BAVGPOST=0.974;BRSQ=0.913;LDAF=0.8762;AVGPOST=0.9813;RSQ=0.9440;ERATE=0.0005;THETA=0.0004;AC=1923;AN=2184 GT:DS:GL:BD 0.88049453 1
1 21344389 rs35921393 T TTGCG 46066 PASS INDEL;BAVGPOST=0.941;BRSQ=0.827;LDAF=0.8367;AVGPOST=0.9547;RSQ=0.8897;ERATE=0.0007;THETA=0.0006;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 21344390 . G GCTTT 83320 PASS INDEL;BAVGPOST=0.923;BRSQ=0.794;LDAF=0.7575;AVGPOST=0.8750;RSQ=0.7405;ERATE=0.0464;THETA=0.0003;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 21344392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9615;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21344558 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21344601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8282;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21344811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21344820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7208;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21345059 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2182;AVGPOST=0.9958;RSQ=0.9904;ERATE=0.0007;THETA=0.0009;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 21345085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21345189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9505;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21345323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21345347 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8916;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0006;THETA=0.0005;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 21345368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21345398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8916;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0004;THETA=0.0009;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 21345603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21345676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21345742 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21345746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0219;AVGPOST=0.9994;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21345780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1122;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0001;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 21345801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0189;AVGPOST=0.9975;RSQ=0.9480;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21345884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0201;AVGPOST=0.9951;RSQ=0.9066;ERATE=0.0006;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21345885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21346115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.9037;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21346169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21346267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0683;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21346294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21346316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21346431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346496 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346685 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9141;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21346837 . ACCT A 1093 PASS INDEL;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0096;AVGPOST=0.9934;RSQ=0.7194;ERATE=0.0026;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21346850 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9990;RSQ=0.9803;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21346862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21346972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21347058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7867;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21347063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8125;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21347084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9625;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21347092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.751;LDAF=0.9262;AVGPOST=0.9443;RSQ=0.6807;ERATE=0.0122;THETA=0.0004;AC=2058;AN=2184 GT:DS:GL:BD 0.94230771 1
1 21347123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21347310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0072;AVGPOST=0.9980;RSQ=0.8911;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21347348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0402;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21347376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9165;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21347410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21347445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9963;RSQ=0.9695;ERATE=0.0008;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21347451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7775;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21347468 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21347487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9152;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21347622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21347747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7770;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0003;THETA=0.0029;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 21347777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21347927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21347993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21348119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348195 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8847;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21348554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21348638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21348746 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348765 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1129;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21348965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6870;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21348990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21349009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0910;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 21349200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9255;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21349355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3070;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 21349419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21349540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21349659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3057;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 21349671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5140;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21349709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21349710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21349737 . C CAA 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21349899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1141;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 21349900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21350199 . AT A 183 PASS INDEL;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.9096;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21350200 . C CAG 496 PASS INDEL;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9383;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21350204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0162;AVGPOST=0.9990;RSQ=0.9760;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21350293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21350342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6170;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0005;THETA=0.0006;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 21350383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0848;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 21350387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21350393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9567;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21350411 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8878;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21350471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21350536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8540;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21350574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7109;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21350608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8961;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21350645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21350851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21350852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21350891 . TAGC T 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21350908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0048;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21351080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9792;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21351123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21351228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21351277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0028;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21351570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21351646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0576;AVGPOST=0.9951;RSQ=0.9652;ERATE=0.0005;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21351730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21351762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21351818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7136;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0007;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 21351922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8074;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=1765;AN=2184 GT:DS:GL:BD 0.80815017 1
1 21351941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9761;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21352014 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0078;AVGPOST=0.9984;RSQ=0.9140;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21352073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21352151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21352189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21352190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6162;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21352209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21352302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9450;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21352396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7235;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0009;THETA=0.0008;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 21352414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9430;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21352438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9309;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21352558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0068;AVGPOST=0.9985;RSQ=0.9156;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21352573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0351;AVGPOST=0.9991;RSQ=0.9894;ERATE=0.0005;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 21352585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0100;AVGPOST=0.9990;RSQ=0.9548;ERATE=0.0004;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21352758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21352794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0182;AVGPOST=0.9976;RSQ=0.9507;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21352851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21352889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21352905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21352914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6325;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21353018 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5869;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21353037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7226;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 21353126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21353195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6976;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21353221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4655;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21353336 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21353411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21353490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5344;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21353503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8585;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21353514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21353595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7820;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21353701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21354012 . A AT 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4383;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21354114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21354145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7572;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21354216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21354343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9991;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21354404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7250;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 21354455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7245;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0005;THETA=0.0005;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 21354463 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0246;AVGPOST=0.9979;RSQ=0.9652;ERATE=0.0004;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21354518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21354531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7241;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0018;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 21354575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0198;AVGPOST=0.9978;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21354707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6258;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21354743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21354769 rs5774479 CT C 27500 PASS INDEL;BAVGPOST=0.976;BRSQ=0.955;LDAF=0.2747;AVGPOST=0.9682;RSQ=0.9506;ERATE=0.0007;THETA=0.0006;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 21355083 . TG T 2641 PASS INDEL;BAVGPOST=0.949;BRSQ=0.900;LDAF=0.2637;AVGPOST=0.9478;RSQ=0.9131;ERATE=0.0009;THETA=0.0005;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 21355086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21355218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0019;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21355319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0737;AVGPOST=0.9979;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 21355373 . CAAA C 125 PASS INDEL;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6037;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21355378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2869;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 21355388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21355389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2757;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0005;THETA=0.0002;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 21355394 rs71773806 TAGA T 11993 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1055;AVGPOST=0.9980;RSQ=0.9920;ERATE=0.0004;THETA=0.0015;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 21355421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21355508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9777;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21355512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7234;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21355636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1220;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21355649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0960;AVGPOST=0.9981;RSQ=0.9907;ERATE=0.0004;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 21355717 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21355849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9667;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21355859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1121;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 21355882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0091;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0004;THETA=0.0029;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21355921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9119;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21356047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21356102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8923;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21356252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7952;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21356284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6820;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21356408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9783;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21356554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6832;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21356583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21356648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21356675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8834;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21356695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9142;ERATE=0.0003;THETA=0.0051;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21356774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5515;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0001;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 21357117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21357173 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2352;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 21357201 . AGTTT A 271 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7034;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21357211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21357228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21357323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21357468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8237;AVGPOST=0.9979;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 21357521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7607;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21357530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21357642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21357682 . TG T 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6313;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21357714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21357733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21357769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1984;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 21357804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0077;AVGPOST=0.9954;RSQ=0.7449;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21357874 . AGAT A 5925 PASS INDEL;BAVGPOST=0.864;BRSQ=0.672;LDAF=0.2358;AVGPOST=0.8399;RSQ=0.6568;ERATE=0.0408;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 21357893 . AT A 349 PASS INDEL;BAVGPOST=0.905;BRSQ=0.462;LDAF=0.1012;AVGPOST=0.8911;RSQ=0.5392;ERATE=0.0124;THETA=0.0008;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21357895 . A AT 955 PASS INDEL;BAVGPOST=0.911;BRSQ=0.442;LDAF=0.1050;AVGPOST=0.8799;RSQ=0.5111;ERATE=0.0191;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21357902 rs71046391 GAT G 292 PASS INDEL;BAVGPOST=0.989;BRSQ=0.702;LDAF=0.0242;AVGPOST=0.9847;RSQ=0.7478;ERATE=0.0009;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21357922 rs71046391 TA T 2386 PASS INDEL;BAVGPOST=0.917;BRSQ=0.525;LDAF=0.1618;AVGPOST=0.8328;RSQ=0.4617;ERATE=0.0569;THETA=0.0002;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 21357924 . TA T 355 PASS INDEL;BAVGPOST=0.992;BRSQ=0.563;LDAF=0.0243;AVGPOST=0.9688;RSQ=0.4981;ERATE=0.0037;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21357932 . TA T 320 PASS INDEL;BAVGPOST=0.996;BRSQ=0.683;LDAF=0.0115;AVGPOST=0.9871;RSQ=0.5599;ERATE=0.0013;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21357936 . TA T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0044;AVGPOST=0.9936;RSQ=0.4059;ERATE=0.0011;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21357960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.779;LDAF=0.0306;AVGPOST=0.9685;RSQ=0.6035;ERATE=0.0074;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21357972 . GA G 11 PASS INDEL;BAVGPOST=0.996;BRSQ=0.420;LDAF=0.0113;AVGPOST=0.9827;RSQ=0.4106;ERATE=0.0037;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21358048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5526;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 21358180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7982;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21358216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9162;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21358320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21358385 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21358400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21358483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8173;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21358523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6051;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21358625 . GA G 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.9057;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21359026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3835;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21359056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4733;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21359140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21359360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6357;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21359413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0141;AVGPOST=0.9980;RSQ=0.9422;ERATE=0.0005;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21359484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5436;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 21359678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21359689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7904;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21359718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21359797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7214;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21359809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21359876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7197;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21359925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21359979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9836;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21360355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21360368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21360424 MERGED_DEL_2_3743 T ADELA . . SV;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0005;THETA=0.0010;CIEND=-17;33;CIPOS=-18;19;END=62263699;SOURCE=GenomeStrip_62259933_62263699;SVTYPE=DEL;AC=1;AN=21 GT:DS:GL:BD 0.00045788 0
1 21360432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5588;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21360466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9397;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21360473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0062;AVGPOST=0.9947;RSQ=0.6658;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21360580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0680;AVGPOST=0.9983;RSQ=0.9881;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21360628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4652;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21360658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9436;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21360752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21360778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6931;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21360880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4493;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21360924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2454;AVGPOST=0.9964;RSQ=0.9928;ERATE=0.0004;THETA=0.0012;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 21361011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2463;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0004;THETA=0.0019;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 21361023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3606;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 21361062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21361097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4058;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3647;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361128 . CAA C 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4876;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361134 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5087;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361188 . G GT 308 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0085;AVGPOST=0.9956;RSQ=0.7722;ERATE=0.0007;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21361269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21361424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21361620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4227;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 21361667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361765 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.8014;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21361911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6693;ERATE=0.0014;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21361915 rs71582649 A AT 12147 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1310;AVGPOST=0.9955;RSQ=0.9832;ERATE=0.0011;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 21361959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21361973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0072;AVGPOST=0.9968;RSQ=0.8342;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21362016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0142;AVGPOST=0.9977;RSQ=0.9385;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21362024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6741;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21362061 . CTCTT C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6616;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21362084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8041;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7443;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2462;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 21362397 . AG A 208 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21362510 . TATC T 428 PASS INDEL;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7721;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21362554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21362607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1260;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0004;THETA=0.0011;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 21362609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7537;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21362718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6942;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4257;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 21362740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21362745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21362752 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9442;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21362762 . TTTTC T 2584 PASS INDEL;BAVGPOST=0.591;BRSQ=0.175;LDAF=0.3656;AVGPOST=0.6489;RSQ=0.3417;ERATE=0.0377;THETA=0.0004;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 21362829 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21362834 . TTC T 1133 PASS INDEL;BAVGPOST=0.949;BRSQ=0.462;LDAF=0.0677;AVGPOST=0.9394;RSQ=0.6246;ERATE=0.0057;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 21362855 . T TTTC 1493 PASS INDEL;BAVGPOST=0.814;BRSQ=0.407;LDAF=0.1606;AVGPOST=0.8341;RSQ=0.5371;ERATE=0.0112;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 21362858 . TTC T 373 PASS INDEL;BAVGPOST=0.965;BRSQ=0.436;LDAF=0.0683;AVGPOST=0.9127;RSQ=0.4408;ERATE=0.0104;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21362859 rs72114409 C CTT 1171 PASS INDEL;BAVGPOST=0.939;BRSQ=0.384;LDAF=0.0795;AVGPOST=0.8963;RSQ=0.4475;ERATE=0.0118;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21362865 . TTC T 140 PASS INDEL;BAVGPOST=0.979;BRSQ=0.155;LDAF=0.0626;AVGPOST=0.8920;RSQ=0.2628;ERATE=0.0078;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21362871 . C CTT 1503 PASS INDEL;BAVGPOST=0.951;BRSQ=0.522;LDAF=0.0850;AVGPOST=0.9213;RSQ=0.6104;ERATE=0.0098;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21362877 rs71728589 C CTT 4344 PASS INDEL;BAVGPOST=0.853;BRSQ=0.579;LDAF=0.2564;AVGPOST=0.8120;RSQ=0.5710;ERATE=0.0290;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21362881 . TTC T 10945 PASS INDEL;BAVGPOST=0.844;BRSQ=0.643;LDAF=0.3247;AVGPOST=0.8170;RSQ=0.6321;ERATE=0.0230;THETA=0.0007;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 21362887 . TCTTTC T 2419 PASS INDEL;BAVGPOST=0.872;BRSQ=0.608;LDAF=0.2234;AVGPOST=0.8143;RSQ=0.5664;ERATE=0.0275;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 21362888 . C CTT 5994 PASS INDEL;BAVGPOST=0.843;BRSQ=0.642;LDAF=0.3512;AVGPOST=0.7823;RSQ=0.5756;ERATE=0.0276;THETA=0.0004;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 21362889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21362951 . T TTCCC 684 PASS INDEL;BAVGPOST=0.993;BRSQ=0.644;LDAF=0.0121;AVGPOST=0.9932;RSQ=0.7806;ERATE=0.0004;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21362997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21363021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9596;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21363210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21363308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21363448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21363480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21363548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21363612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21363706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21363707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9054;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21363748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21363773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0010;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21363789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3584;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 21363806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21363811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.9013;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21363818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3583;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 21363915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21363987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6169;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21364126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9689;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21364244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8815;ERATE=0.0009;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21364255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0466;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21364268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9980;RSQ=0.9477;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21364379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9809;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21364502 . A AT 27 PASS INDEL;BAVGPOST=0.997;BRSQ=0.550;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3199;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21364541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2500;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0007;THETA=0.0019;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 21364627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5254;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21364677 . GCC G 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6513;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21364782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0345;AVGPOST=0.9979;RSQ=0.9740;ERATE=0.0005;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21364919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7492;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21365180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.830;LDAF=0.0094;AVGPOST=0.9967;RSQ=0.8534;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21365216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5064;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21365228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21365512 . T TA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.4617;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21365529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21365655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7160;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21365875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21365885 rs5774618 CAG C 4998 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0213;AVGPOST=0.9978;RSQ=0.9604;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21365893 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0107;AVGPOST=0.9974;RSQ=0.9150;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21366070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6003;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21366384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7852;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21366465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21366582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21366698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21367041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5783;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21367070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21367172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9416;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21367223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6580;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 21367243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6679;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21367333 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5088;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 21367425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21367494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5170;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21367547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4645;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21367669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5077;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 21367766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5082;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 21367935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21367958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8354;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21368067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21368419 . CAATT C 253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0034;AVGPOST=0.9961;RSQ=0.5572;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21368455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0242;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21368496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21368735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6852;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21368751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21368970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8853;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21368973 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9452;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21369099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21369343 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5091;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 21369399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21369625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0079;AVGPOST=0.9967;RSQ=0.8434;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21369641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21369670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8339;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21369873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21369949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4866;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21370153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6782;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21370283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.7200;ERATE=0.0014;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21370716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7683;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21370788 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4317;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21370826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8647;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21370914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21371133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7535;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21371142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.9170;ERATE=0.0003;THETA=0.0025;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21371170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6869;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21371557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0137;AVGPOST=0.9997;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21371702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21371711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21371836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2544;ERATE=0.0004;THETA=0.0024;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21371917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21371990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0093;AVGPOST=0.9990;RSQ=0.9523;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21372158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21372182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9785;ERATE=0.0003;THETA=0.0055;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21372366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7658;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21372382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21372494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21372621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0212;AVGPOST=0.9961;RSQ=0.9253;ERATE=0.0007;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21372739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5901;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21372821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8741;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 21372828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8641;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21372887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8698;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21372888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0061;AVGPOST=0.9967;RSQ=0.7998;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21372911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.8672;AVGPOST=0.9912;RSQ=0.9712;ERATE=0.0013;THETA=0.0008;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 21372915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21373105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21373110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7927;AVGPOST=0.9969;RSQ=0.9933;ERATE=0.0005;THETA=0.0005;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 21373133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21373217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8740;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0011;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 21373368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0379;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 21373514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8742;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0009;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 21373528 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9165;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21373660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21373688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21373708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21373888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7718;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21373910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9999;RSQ=0.9951;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21374127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8520;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 21374199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8183;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21374307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21374408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8658;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21374425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7645;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21374540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21374711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21374759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21374803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.966;LDAF=0.4850;AVGPOST=0.9723;RSQ=0.9659;ERATE=0.0008;THETA=0.0012;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 21374840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8821;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0010;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 21374897 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6588;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21374923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7624;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21374925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21375088 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.8694;AVGPOST=0.9943;RSQ=0.9839;ERATE=0.0016;THETA=0.0009;AC=1900;AN=2184 GT:DS:GL:BD 0.86996335 1
1 21375151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0204;AVGPOST=0.9983;RSQ=0.9631;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21375226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0151;AVGPOST=0.9944;RSQ=0.8393;ERATE=0.0004;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21375234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1524;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 21375270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8139;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0004;THETA=0.0006;AC=1777;AN=2184 GT:DS:GL:BD 0.81364471 1
1 21375349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21375398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21375399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21375610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0267;AVGPOST=0.9987;RSQ=0.9809;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21375633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21375697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21375711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9342;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21376086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2266;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 21376313 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.614;LDAF=0.0241;AVGPOST=0.9761;RSQ=0.6102;ERATE=0.0116;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21376374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21376440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9694;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21376454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21376508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9015;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21376676 . CT C 156 PASS INDEL;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0061;AVGPOST=0.9948;RSQ=0.6438;ERATE=0.0012;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21376691 . TTTTG T 396 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7327;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21376705 . GTTTTGTT G 574 PASS INDEL;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9549;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21376728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0306;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21376794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2362;AVGPOST=0.9916;RSQ=0.9825;ERATE=0.0006;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 21376909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0320;AVGPOST=0.9964;RSQ=0.9580;ERATE=0.0004;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21376959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21377082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.860;LDAF=0.0163;AVGPOST=0.9958;RSQ=0.8974;ERATE=0.0005;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21377153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9989;RSQ=0.9691;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21377241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0025;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21377308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21377441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21377498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0442;AVGPOST=0.9992;RSQ=0.9934;ERATE=0.0004;THETA=0.0008;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21377575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21377602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0134;AVGPOST=0.9979;RSQ=0.9390;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21377655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7160;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21377762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21377763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0012;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21377834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8369;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21377984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0313;AVGPOST=0.9988;RSQ=0.9848;ERATE=0.0005;THETA=0.0026;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21378001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21378053 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21378119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2635;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 21378160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21378203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21378227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21378405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21378812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21378859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21378863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21379009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4808;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21379017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0013;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21379053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9775;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21379126 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21379156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0323;AVGPOST=0.9982;RSQ=0.9760;ERATE=0.0004;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21379262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8657;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21379419 MERGED_DEL_2_3826 AAGGATGGTCTCAATCTCCTGACCTCATGATCTACACGTCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGACCCTAATTTTTAACTTATTTTCACTTCATACTGAATCTCTTACTTGCATTTGTTGAACACACTATCTGCCCAGCACTGTGCTAAGTACATATGTGTTATCTC A . . SV;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0007;CIEND=-10;25;CIPOS=-25;9;END=65871481;HOMLEN=2;HOMSEQ=AG;SOURCE=EMBLdelly_65443324_65871482;SVLEN GT:DS:GL:BD 0.00045788 0
1 21379469 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.838;LDAF=0.0129;AVGPOST=0.9918;RSQ=0.7683;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21379477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8632;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21379496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21379641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6054;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21379674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21379679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21379691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.669;LDAF=0.0102;AVGPOST=0.9920;RSQ=0.7352;ERATE=0.0006;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21379728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3524;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21379922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5260;ERATE=0.0006;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21379967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380077 . G GA 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0005;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8828;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21380444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0444;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0005;THETA=0.0041;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 21380502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6061;ERATE=0.0006;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21380521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0067;AVGPOST=0.9972;RSQ=0.8242;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21380562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6609;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21380730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5610;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21380938 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21381112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5085;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21381122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1207;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 21381131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4010;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 21381235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21381299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21381303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21381325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8337;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21381470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21381499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21381508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21381593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21381678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8589;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21381685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1208;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 21381790 . TTAAA T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5362;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21381799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21381816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21382155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21382244 . GT G 334 PASS INDEL;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0060;AVGPOST=0.9960;RSQ=0.7139;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21382274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21382413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0082;AVGPOST=0.9969;RSQ=0.8523;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21382415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1322;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 21382416 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1268;AVGPOST=0.9978;RSQ=0.9917;ERATE=0.0006;THETA=0.0009;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 21382455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0162;AVGPOST=0.9952;RSQ=0.8936;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21382534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21382654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21382707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8683;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21382737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21382761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21382775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7155;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21382796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6580;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21382809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21382839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6962;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21383148 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5233;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0006;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 21383162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1658;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0006;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 21383262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21383280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1050;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 21383320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4440;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21383382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.458;LDAF=0.0047;AVGPOST=0.9931;RSQ=0.3894;ERATE=0.0024;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21383391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8628;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21383471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1143;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 21383568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1653;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 21383612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21383660 rs67518197 AGTATTATACTAAAT A 80079 PASS INDEL;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.8158;AVGPOST=0.9598;RSQ=0.8933;ERATE=0.0052;THETA=0.0004;AC=1811;AN=2184 GT:DS:GL:BD 0.82921243 1
1 21383851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5232;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 21383920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1658;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 21384096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6242;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21384173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21384293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6874;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1214;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0006;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 21384379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1315;AVGPOST=0.9959;RSQ=0.9866;ERATE=0.0005;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 21384433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6912;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21384564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0127;AVGPOST=0.9974;RSQ=0.9149;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21384661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21384678 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1670;AVGPOST=0.9972;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 21384679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0025;AVGPOST=0.9957;RSQ=0.4055;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21384932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9330;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21384980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21385150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7840;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21385279 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21385380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8854;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21385385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8901;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21385452 rs66520056 T TCACCACA 2599 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9966;RSQ=0.9016;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21385458 . A AAT 37 PASS INDEL;BAVGPOST=0.996;BRSQ=0.712;LDAF=0.0165;AVGPOST=0.9817;RSQ=0.5851;ERATE=0.0033;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21385521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5175;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0005;THETA=0.0007;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 21385552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9136;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21385555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21385618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0169;AVGPOST=0.9978;RSQ=0.9525;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21385675 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6469;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21385727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9096;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 21385988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.810;LDAF=0.0186;AVGPOST=0.9977;RSQ=0.9432;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21386052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5866;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21386110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7838;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21386150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7910;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0006;THETA=0.0006;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 21386164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.530;LDAF=0.0038;AVGPOST=0.9952;RSQ=0.4955;ERATE=0.0011;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21386233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.8819;AVGPOST=0.9882;RSQ=0.9569;ERATE=0.0015;THETA=0.0004;AC=1936;AN=2184 GT:DS:GL:BD 0.88644689 1
1 21386236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21386283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0138;AVGPOST=0.9931;RSQ=0.8215;ERATE=0.0007;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21386341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0188;AVGPOST=0.9994;RSQ=0.9835;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21386418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5281;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21386524 . GAC G 926 PASS INDEL;BAVGPOST=0.980;BRSQ=0.767;LDAF=0.0636;AVGPOST=0.9487;RSQ=0.6483;ERATE=0.0235;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21386626 . CAT C 1687 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9100;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21386640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21386642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4759;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21386717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21386774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21386775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21386826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9353;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21387002 . CT C 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8231;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21387045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21387096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6132;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0004;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 21387180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8765;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21387366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1006;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 21387395 . CAG C 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5262;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21387607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9017;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0005;THETA=0.0006;AC=1972;AN=2184 GT:DS:GL:BD 0.90293038 1
1 21387646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21387647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21387713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3321;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21387857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21387880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0170;AVGPOST=0.9986;RSQ=0.9656;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21387899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21388047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0805;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 21388172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0219;AVGPOST=0.9982;RSQ=0.9669;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21388174 . CAAAT C 9032 PASS INDEL;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0992;AVGPOST=0.9974;RSQ=0.9883;ERATE=0.0007;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 21388197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7811;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21388343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6925;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0008;THETA=0.0003;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 21388405 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6944;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0006;THETA=0.0023;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 21388523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0448;AVGPOST=0.9967;RSQ=0.9707;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21388525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.541;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5320;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21388595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0083;AVGPOST=0.9960;RSQ=0.8094;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21388654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0452;AVGPOST=0.9984;RSQ=0.9828;ERATE=0.0006;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21388673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.939;LDAF=0.8802;AVGPOST=0.9852;RSQ=0.9512;ERATE=0.0009;THETA=0.0004;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 21388715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0452;AVGPOST=0.9982;RSQ=0.9845;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21388716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.967;LDAF=0.7785;AVGPOST=0.9791;RSQ=0.9581;ERATE=0.0032;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 21388718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.960;LDAF=0.0979;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0006;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 21388721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.941;LDAF=0.7806;AVGPOST=0.9865;RSQ=0.9708;ERATE=0.0008;THETA=0.0004;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 21388773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.949;LDAF=0.6721;AVGPOST=0.9621;RSQ=0.9355;ERATE=0.0059;THETA=0.0003;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 21388775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0998;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 21388852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0170;AVGPOST=0.9993;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21388855 . C CA 280 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8922;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21388921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7895;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 21389015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7290;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21389069 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8072;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21389082 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7867;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21389094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21389122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21389203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1427;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 21389227 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389241 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21389416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6317;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389487 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.8875;AVGPOST=0.9947;RSQ=0.9800;ERATE=0.0008;THETA=0.0005;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 21389604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.954;LDAF=0.0961;AVGPOST=0.9959;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 21389605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.8815;AVGPOST=0.9877;RSQ=0.9601;ERATE=0.0015;THETA=0.0004;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 21389614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389651 . AAAAC A 1431 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9553;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21389699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21389745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5251;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21389792 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0060;AVGPOST=0.9976;RSQ=0.8294;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21389888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9010;AVGPOST=0.9977;RSQ=0.9898;ERATE=0.0007;THETA=0.0007;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 21389970 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.6150;AVGPOST=0.9910;RSQ=0.9864;ERATE=0.0014;THETA=0.0004;AC=1343;AN=2184 GT:DS:GL:BD 0.61492676 1
1 21390035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.939;LDAF=0.8721;AVGPOST=0.9715;RSQ=0.9055;ERATE=0.0039;THETA=0.0005;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 21390055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.935;LDAF=0.1105;AVGPOST=0.9957;RSQ=0.9822;ERATE=0.0004;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 21390056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4160;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21390078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0130;AVGPOST=0.9937;RSQ=0.8303;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21390105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0999;AVGPOST=0.9978;RSQ=0.9909;ERATE=0.0005;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 21390163 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.948;LDAF=0.7795;AVGPOST=0.9749;RSQ=0.9457;ERATE=0.0034;THETA=0.0007;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 21390277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21390485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0216;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21390583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9785;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 21390718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2338;AVGPOST=0.9950;RSQ=0.9894;ERATE=0.0016;THETA=0.0007;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 21390833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2469;AVGPOST=0.9776;RSQ=0.9560;ERATE=0.0017;THETA=0.0007;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 21390878 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21391195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2299;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 21391341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8422;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21391370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9776;AVGPOST=0.9991;RSQ=0.9818;ERATE=0.0005;THETA=0.0005;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 21391390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21391532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6020;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21391553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21391658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21391722 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4345;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21391829 . AC A 806 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9320;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21392036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5396;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21392232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21392245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21392382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8641;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21392403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5296;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21392444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3767;AVGPOST=0.9969;RSQ=0.9948;ERATE=0.0005;THETA=0.0008;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 21392478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21392572 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9021;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21392577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9570;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21392629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21392648 . TA T 1018 PASS INDEL;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0078;AVGPOST=0.9958;RSQ=0.8240;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21392652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2300;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 21392748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.751;LDAF=0.0062;AVGPOST=0.9971;RSQ=0.8298;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21392799 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0163;AVGPOST=0.9968;RSQ=0.9326;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21392933 . CAAG C 790 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9781;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21393010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7947;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21393115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.3066;AVGPOST=0.9678;RSQ=0.9517;ERATE=0.0130;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 21393167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21393171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21393264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3615;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 21393313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2398;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 21393333 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21393358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21393368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8726;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21393466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5859;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21393554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6910;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21393562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5968;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 21393603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0310;AVGPOST=0.9985;RSQ=0.9803;ERATE=0.0007;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21393660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21393726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4478;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21393817 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21394113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21394234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3809;AVGPOST=0.9923;RSQ=0.9881;ERATE=0.0005;THETA=0.0008;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 21394268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6040;AVGPOST=0.9920;RSQ=0.9878;ERATE=0.0007;THETA=0.0077;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 21394294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9435;ERATE=0.0003;THETA=0.0188;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21394320 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7417;ERATE=0.0003;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21394418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9111;ERATE=0.0004;THETA=0.0128;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21394446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8688;ERATE=0.0003;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21394506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9500;ERATE=0.0005;THETA=0.0068;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21394565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21394594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0134;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21394828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21394944 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0097;AVGPOST=0.9992;RSQ=0.9704;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21394967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.9767;AVGPOST=0.9980;RSQ=0.9669;ERATE=0.0005;THETA=0.0108;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 21395002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.967;LDAF=0.0672;AVGPOST=0.9923;RSQ=0.9585;ERATE=0.0004;THETA=0.0331;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21395003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21395063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0003;THETA=0.0195;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21395097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21395113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0237;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21395349 . C CA 6350 PASS INDEL;BAVGPOST=0.990;BRSQ=0.914;LDAF=0.0482;AVGPOST=0.9912;RSQ=0.9291;ERATE=0.0006;THETA=0.0440;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 21395442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0264;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21395524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8558;ERATE=0.0003;THETA=0.0299;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21395623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1057;AVGPOST=0.9965;RSQ=0.9865;ERATE=0.0006;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 21395761 rs71817477 AT A 8810 PASS INDEL;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.2019;AVGPOST=0.9915;RSQ=0.9796;ERATE=0.0016;THETA=0.0015;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 21395945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21396004 . TA T 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8350;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21396369 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7210;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21396477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21396482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9329;AVGPOST=0.9974;RSQ=0.9827;ERATE=0.0005;THETA=0.0004;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 21396654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8633;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21396954 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6726;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21397126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21397148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7325;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21397218 rs76151796 TA T 35470 PASS INDEL;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.7046;AVGPOST=0.9797;RSQ=0.9622;ERATE=0.0018;THETA=0.0004;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 21397597 . AAC A 407 PASS INDEL;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0100;AVGPOST=0.9954;RSQ=0.8287;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21397604 . AC A 522 PASS INDEL;BAVGPOST=0.951;BRSQ=0.457;LDAF=0.0582;AVGPOST=0.9174;RSQ=0.4442;ERATE=0.0055;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21397605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0105;AVGPOST=0.9973;RSQ=0.8854;ERATE=0.0005;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21397642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7266;AVGPOST=0.9948;RSQ=0.9888;ERATE=0.0009;THETA=0.0004;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 21397666 . ACT A 301 PASS INDEL;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0037;AVGPOST=0.9953;RSQ=0.4731;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21397741 . AATG A 5605 PASS INDEL;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0663;AVGPOST=0.9931;RSQ=0.9498;ERATE=0.0013;THETA=0.0019;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 21397760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3079;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21397800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6707;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21397851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21398030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21398080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7107;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 21398177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21398197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21398279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21398307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7079;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21398559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21398572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.9314;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0004;THETA=0.0007;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 21398627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21398731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7078;AVGPOST=0.9974;RSQ=0.9946;ERATE=0.0006;THETA=0.0007;AC=1547;AN=2184 GT:DS:GL:BD 0.70833331 1
1 21398838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7744;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21398861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6928;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21399115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9304;AVGPOST=0.9984;RSQ=0.9893;ERATE=0.0005;THETA=0.0003;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 21399130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9162;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 21399150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4622;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21399243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21399291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6982;AVGPOST=0.9956;RSQ=0.9920;ERATE=0.0010;THETA=0.0009;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 21399334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7874;ERATE=0.0006;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21399436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21399638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7243;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21399794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1660;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 21399858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1490;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 21400120 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8180;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21400162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0250;AVGPOST=0.9979;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21400165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9166;AVGPOST=0.9984;RSQ=0.9911;ERATE=0.0006;THETA=0.0002;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 21400176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.9944;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0008;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 21400333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9173;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 21400345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21400360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21400462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0005;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21400626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8858;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21400650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.638;LDAF=0.0207;AVGPOST=0.9777;RSQ=0.5809;ERATE=0.0100;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21400658 . CTG C 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21400697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.6869;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21400720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4540;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21400776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7015;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21400780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21400815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0407;AVGPOST=0.9922;RSQ=0.9265;ERATE=0.0004;THETA=0.0014;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21400816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.662;LDAF=0.0067;AVGPOST=0.9961;RSQ=0.7675;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21400849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1189;AVGPOST=0.9950;RSQ=0.9822;ERATE=0.0005;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 21400865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0187;AVGPOST=0.9992;RSQ=0.9823;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21400876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6201;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21400940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6926;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21400945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9117;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21401239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21401343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1373;AVGPOST=0.9935;RSQ=0.9795;ERATE=0.0005;THETA=0.0004;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 21401363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7887;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21401473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21401509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9014;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21401528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7357;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21401537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1323;AVGPOST=0.9963;RSQ=0.9872;ERATE=0.0004;THETA=0.0007;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21401604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21401668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6974;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21401694 . TG T 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21401706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9238;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21401711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7234;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21401730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4536;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21401802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.943;LDAF=0.0476;AVGPOST=0.9954;RSQ=0.9664;ERATE=0.0004;THETA=0.0007;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 21401896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4777;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21402121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0108;AVGPOST=0.9988;RSQ=0.9495;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21402151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6822;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21402285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21402369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8937;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21402440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21402461 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21402515 . GA G 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21402591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21402640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8846;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21402712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6007;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21402733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21402809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6736;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21402994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0371;AVGPOST=0.9973;RSQ=0.9722;ERATE=0.0004;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 21403003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0252;AVGPOST=0.9985;RSQ=0.9754;ERATE=0.0007;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21403167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21403209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8672;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21403250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5530;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21403278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21403368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4765;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21403371 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.9000;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21403388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.0960;AVGPOST=0.9948;RSQ=0.9833;ERATE=0.0010;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 21403444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0412;AVGPOST=0.9952;RSQ=0.9606;ERATE=0.0003;THETA=0.0009;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21403450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.458;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.4939;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21403645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0054;AVGPOST=0.9962;RSQ=0.7063;ERATE=0.0008;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21403699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8629;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21403751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21403919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5283;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21403920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7564;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21403995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21404015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7674;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21404092 . TCA T 3071 PASS INDEL;BAVGPOST=0.983;BRSQ=0.870;LDAF=0.0704;AVGPOST=0.9964;RSQ=0.9775;ERATE=0.0006;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21404097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21404137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21404235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21404421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8289;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21404440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7939;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21404479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21404682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9086;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21404706 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5981;AVGPOST=0.9805;RSQ=0.9672;ERATE=0.0017;THETA=0.0040;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 21404847 . G GA 2725 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0253;AVGPOST=0.9968;RSQ=0.9554;ERATE=0.0007;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21404887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9703;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21404995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21405062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0896;AVGPOST=0.9968;RSQ=0.9891;ERATE=0.0004;THETA=0.0003;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 21405096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.479;LDAF=0.9190;AVGPOST=0.8975;RSQ=0.4710;ERATE=0.0193;THETA=0.0004;AC=2068;AN=2184 GT:DS:GL:BD 0.94688642 1
1 21405122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.782;LDAF=0.0191;AVGPOST=0.9954;RSQ=0.9129;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21405124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0765;AVGPOST=0.9945;RSQ=0.9681;ERATE=0.0010;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 21405178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0057;AVGPOST=0.9945;RSQ=0.5991;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21405179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8909;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21405282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5183;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21405380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8771;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21405451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21405463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6637;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21405557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21405681 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21405714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9639;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21405745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8310;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21405777 . AGTT A 1729 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0160;AVGPOST=0.9942;RSQ=0.8819;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21405996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0280;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21405998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21406195 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5353;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21406269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21406486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1398;AVGPOST=0.9914;RSQ=0.9760;ERATE=0.0004;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 21406643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21406645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2501;AVGPOST=0.9930;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 21406749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21406802 . GAGA G 13 PASS INDEL;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7139;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21406831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21406928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0067;AVGPOST=0.9973;RSQ=0.8338;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21406974 . TA T 360 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9128;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21406993 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4683;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21407097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0283;AVGPOST=0.9989;RSQ=0.9837;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21407107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0281;AVGPOST=0.9984;RSQ=0.9792;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21407109 . T TG 1176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0294;AVGPOST=0.9980;RSQ=0.9709;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21407109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6396;ERATE=0.0009;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21407257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0095;AVGPOST=0.9946;RSQ=0.7606;ERATE=0.0007;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21407259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5407;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21407425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21407651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.6205;ERATE=0.0006;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21407930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0057;AVGPOST=0.9965;RSQ=0.7496;ERATE=0.0007;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21408292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0165;AVGPOST=0.9981;RSQ=0.9554;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21408297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8655;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21408350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21408403 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7607;ERATE=0.0012;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21408414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4974;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21408476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1201;AVGPOST=0.9952;RSQ=0.9844;ERATE=0.0004;THETA=0.0001;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 21408539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4705;AVGPOST=0.9946;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 21408599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.0099;AVGPOST=0.9962;RSQ=0.8531;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21408729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21408751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0256;AVGPOST=0.9985;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21408761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21408851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7887;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21408882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0288;AVGPOST=0.9982;RSQ=0.9749;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21408891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21409002 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9990;RSQ=0.9847;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21409053 . TA T 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21409171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0067;AVGPOST=0.9968;RSQ=0.8265;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21409210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8007;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21409212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0497;AVGPOST=0.9973;RSQ=0.9775;ERATE=0.0004;THETA=0.0036;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 21409259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6529;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21409261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9188;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21409299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5591;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21409317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21409389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7952;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21409410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21409528 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4296;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21409636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21409702 . C CA 8278 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0870;AVGPOST=0.9964;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 21409723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0282;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21409864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5776;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21409923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21410017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9708;ERATE=0.0003;THETA=0.0025;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21410163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0130;AVGPOST=0.9982;RSQ=0.9534;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21410241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21410243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21410262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9447;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21410304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0213;AVGPOST=0.9942;RSQ=0.9089;ERATE=0.0003;THETA=0.0020;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21410378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0282;AVGPOST=0.9992;RSQ=0.9879;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21410419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9131;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21410535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21410867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6109;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21410873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21410874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21410890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8197;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21410931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21410945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21410960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9853;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21410961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21410964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7563;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21411136 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21411177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21411183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7208;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21411233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6409;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21411264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7040;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21411269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21411273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21411415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6767;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21411449 . TA T 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6360;ERATE=0.0005;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21411533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0002;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21411579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6820;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 21411583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21411672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0179;AVGPOST=0.9950;RSQ=0.8893;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21411703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21411842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0100;AVGPOST=0.9912;RSQ=0.6456;ERATE=0.0010;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21411868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21411980 . TAAAC T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5529;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21411991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5507;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21412067 . AAAGATGGATT A 1227 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8619;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21412277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21412531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.8805;AVGPOST=0.9963;RSQ=0.9856;ERATE=0.0007;THETA=0.0005;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 21412543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21412554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6286;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21412638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6007;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21412833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5636;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21412849 . C CA 5164 PASS INDEL;BAVGPOST=0.965;BRSQ=0.855;LDAF=0.1447;AVGPOST=0.9033;RSQ=0.6959;ERATE=0.0152;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 21413012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21413052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21413192 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0088;AVGPOST=0.9965;RSQ=0.8547;ERATE=0.0007;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21413263 rs60938962 G GACCTACA 1934 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9033;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21413279 rs76447464 AATTAT A 72260 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6691;AVGPOST=0.9739;RSQ=0.9600;ERATE=0.0048;THETA=0.0005;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 21413446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5565;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21413519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21413522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0003;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21413595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8414;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21413684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21413830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0136;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21413846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21413866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9481;ERATE=0.0005;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21413893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6832;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0009;THETA=0.0005;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 21413952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21414000 . ATTG A 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0044;AVGPOST=0.9952;RSQ=0.6063;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21414166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21414303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6824;AVGPOST=0.9959;RSQ=0.9931;ERATE=0.0006;THETA=0.0004;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 21414327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9838;AVGPOST=0.9948;RSQ=0.8571;ERATE=0.0009;THETA=0.0007;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 21414338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0183;AVGPOST=0.9970;RSQ=0.9348;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21414367 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1191;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 21414521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21414591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9916;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0003;THETA=0.0009;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 21414652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9538;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21414655 . TTG T 38183 PASS INDEL;BAVGPOST=0.968;BRSQ=0.702;LDAF=0.9123;AVGPOST=0.9162;RSQ=0.5801;ERATE=0.0172;THETA=0.0005;AC=2060;AN=2184 GT:DS:GL:BD 0.94322342 1
1 21414802 rs111594239 TG T 54056 PASS INDEL;BAVGPOST=0.969;BRSQ=0.708;LDAF=0.9342;AVGPOST=0.9384;RSQ=0.6134;ERATE=0.0090;THETA=0.0010;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 21414805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21414828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6720;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=1468;AN=2184 GT:DS:GL:BD 0.67216116 1
1 21415209 rs112317137 TC T 367 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8735;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21415267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6901;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21415353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9971;AVGPOST=0.9987;RSQ=0.7922;ERATE=0.0005;THETA=0.0006;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 21415375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8327;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21415556 . GC G 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5774;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21415625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6790;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0004;THETA=0.0011;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 21415799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0085;AVGPOST=0.9971;RSQ=0.8752;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21415824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21415920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0536;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21415943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21415989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4734;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21416167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0030;AVGPOST=0.9953;RSQ=0.5172;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21416328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21416388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6144;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21416394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21416425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21416645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5990;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0007;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 21416718 . G GA 51 PASS INDEL;BAVGPOST=0.987;BRSQ=0.518;LDAF=0.0283;AVGPOST=0.9641;RSQ=0.5054;ERATE=0.0063;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21416882 . C CT 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21416894 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21416936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6812;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21417069 rs66845618 AG A 14458 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1382;AVGPOST=0.9947;RSQ=0.9814;ERATE=0.0007;THETA=0.0004;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 21417218 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.972;LDAF=0.5137;AVGPOST=0.9602;RSQ=0.9447;ERATE=0.0083;THETA=0.0006;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 21417345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7554;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21417476 . A ATG 894 PASS INDEL;BAVGPOST=0.963;BRSQ=0.748;LDAF=0.0899;AVGPOST=0.9426;RSQ=0.7339;ERATE=0.0053;THETA=0.0014;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 21417512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.859;LDAF=0.0136;AVGPOST=0.9972;RSQ=0.9230;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21417598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6398;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21417678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6830;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21417751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4816;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21417782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21417855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1567;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0008;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 21417921 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7268;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21417991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21418198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6321;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0009;AC=1380;AN=2184 GT:DS:GL:BD 0.63186812 1
1 21418267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21418297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21418330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6076;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21418342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21418451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5319;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21418534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.6281;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21418562 . AC A 467 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7455;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21418845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1939;AVGPOST=0.9948;RSQ=0.9863;ERATE=0.0009;THETA=0.0031;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 21418902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0106;AVGPOST=0.9939;RSQ=0.7810;ERATE=0.0008;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21418908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9007;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21418967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21419164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8320;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21419334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8747;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21419409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7693;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21419532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8473;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0003;THETA=0.0017;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 21419535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21419761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6781;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21419772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7147;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21419796 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5619;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21419922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21420038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5032;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21420258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21420289 . T TG 111 PASS INDEL;BAVGPOST=0.959;BRSQ=0.367;LDAF=0.0527;AVGPOST=0.9346;RSQ=0.5046;ERATE=0.0059;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21420304 rs34054350 G GA 8385 PASS INDEL;BAVGPOST=0.963;BRSQ=0.877;LDAF=0.2076;AVGPOST=0.8955;RSQ=0.7489;ERATE=0.0178;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 21420307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8196;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21420445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21420518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9593;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21420704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0699;AVGPOST=0.9972;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 21420740 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8995;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21420762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21420907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6556;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21420913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21421012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21421056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21421061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21421065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21421066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21421090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3090;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 21421149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21421214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21421246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5655;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21421316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21421334 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21421376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6852;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21421388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7106;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21421575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3089;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 21421712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21421812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21421910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8901;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21421949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5951;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 21421976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3086;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 21422044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7693;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21422049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21422145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3221;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0007;THETA=0.0004;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 21422168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21422200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21422215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21422222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21422229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3279;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0006;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 21422339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21422386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5953;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0007;THETA=0.0004;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 21422464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21422547 . TATA T 1172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8725;ERATE=0.0006;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21422614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21422744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4267;AVGPOST=0.9992;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 21422877 . G GA 275 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7865;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21422945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21422990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21423021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21423085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21423104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21423119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3300;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0016;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 21423128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9314;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0006;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 21423177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21423338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9311;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 21423429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21423501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21423514 rs5775244 CT C 77153 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9289;AVGPOST=0.9943;RSQ=0.9637;ERATE=0.0012;THETA=0.0005;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 21423556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7729;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21423630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7620;ERATE=0.0014;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21423682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8673;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21423778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8193;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21423800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3106;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 21423821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7580;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21423965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6727;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21423969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6122;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0009;THETA=0.0008;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 21424109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21424122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9383;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 21424169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21424197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.6011;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21424210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7958;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21424254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9308;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 21424327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21424338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5341;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21424380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6060;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 21424545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21424673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8088;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21424676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0195;AVGPOST=0.9985;RSQ=0.9698;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21424685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8131;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21424955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5798;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21424989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21425003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9703;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21425031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6008;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0011;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 21425109 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21425223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21425237 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21425385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6008;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 21425512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21425609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3314;ERATE=0.0003;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21425748 rs36214325 C CT 150 PASS INDEL;BAVGPOST=0.514;BRSQ=0.061;LDAF=0.2926;AVGPOST=0.6408;RSQ=0.2429;ERATE=0.0295;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 21425849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.472;LDAF=0.0025;AVGPOST=0.9961;RSQ=0.4030;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21425879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9449;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21426000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6836;AVGPOST=0.9960;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 21426205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21426238 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6422;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21426263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9257;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21426321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21426344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21426354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6215;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21426370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8563;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21426382 . CA C 5059 PASS INDEL;BAVGPOST=0.839;BRSQ=0.748;LDAF=0.5104;AVGPOST=0.8203;RSQ=0.7624;ERATE=0.0221;THETA=0.0010;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 21426488 rs10714827 AT A 54433 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6867;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 21426489 . TG T 6681 PASS INDEL;BAVGPOST=0.854;BRSQ=0.777;LDAF=0.5467;AVGPOST=0.8482;RSQ=0.7973;ERATE=0.0221;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 21426493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0219;AVGPOST=0.9989;RSQ=0.9801;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21426505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8894;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21426513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21426530 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1202;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 21426561 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21426735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21426770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1917;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 21426836 . GCA G 39 PASS INDEL;BAVGPOST=0.993;BRSQ=0.701;LDAF=0.0171;AVGPOST=0.9830;RSQ=0.5855;ERATE=0.0071;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21427035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21427126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4783;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21427149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5416;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21427162 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8126;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21427193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9158;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21427269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21427317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21427539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4782;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21427611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8240;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21427692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21427704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8359;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21427785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21427801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9450;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21427807 . TATTA T 188 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7913;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21427853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7643;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21427857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21428108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1561;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 21428144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1562;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 21428150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21428247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0087;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21428273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21428358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21428418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21428535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9973;RSQ=0.9325;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21428572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5782;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21428667 . ATGACGGGT A 14840 PASS INDEL;BAVGPOST=0.958;BRSQ=0.849;LDAF=0.1328;AVGPOST=0.9702;RSQ=0.9164;ERATE=0.0011;THETA=0.0008;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 21428765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4225;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21428770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.553;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8173;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21428807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21428848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21428877 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3963;AVGPOST=0.9954;RSQ=0.9932;ERATE=0.0010;THETA=0.0003;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 21429050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21429119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21429145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7995;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21429190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0719;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0002;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21429371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2798;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 21429385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0721;AVGPOST=0.9979;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21429540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8070;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21429542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21429687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8398;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21429888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1606;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21429925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7454;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21430057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9647;AVGPOST=0.9986;RSQ=0.9809;ERATE=0.0005;THETA=0.0004;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 21430060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7423;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21430145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5962;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21430221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21430353 . ATT A 2825 PASS INDEL;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0160;AVGPOST=0.9979;RSQ=0.9435;ERATE=0.0005;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21430354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8052;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 21430446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6074;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21430568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9657;AVGPOST=0.9990;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=2110;AN=2184 GT:DS:GL:BD 0.96611720 1
1 21430590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9202;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21430622 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5764;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21430708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7018;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21430776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3946;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21430794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9971;RSQ=0.9084;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21430831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21430837 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1196;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 21431024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8085;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=1765;AN=2184 GT:DS:GL:BD 0.80815017 1
1 21431150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7675;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21431306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7230;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21431313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21431374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21431381 . AT A 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3789;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21431531 rs34447225 T TG 12589 PASS INDEL;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0974;AVGPOST=0.9926;RSQ=0.9716;ERATE=0.0004;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 21431544 . G GA 2386 PASS INDEL;BAVGPOST=0.989;BRSQ=0.946;LDAF=0.0945;AVGPOST=0.9915;RSQ=0.9640;ERATE=0.0007;THETA=0.0017;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 21431546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21431660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21431663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9987;RSQ=0.9734;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21431736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3280;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 21431772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21431819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1244;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21431886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21431908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0182;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21431969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21431980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1066;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 21432028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9274;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21432158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1053;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 21432168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21432178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21432200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432201 . T TA 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0033;AVGPOST=0.9966;RSQ=0.5628;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21432202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21432321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0214;AVGPOST=0.9964;RSQ=0.9376;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21432388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8107;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21432503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21432636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.3357;AVGPOST=0.9760;RSQ=0.9658;ERATE=0.0134;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 21432855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21432997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0913;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 21433039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1138;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21433100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5502;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21433116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21433149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21433273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0784;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 21433319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0121;AVGPOST=0.9991;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21433399 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1047;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 21433412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21433433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21433485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1218;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21433488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21433578 . C CA 69 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21433593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21433595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21433660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1215;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21433675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21433703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21433745 . GAC G 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21433887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.881;LDAF=0.0137;AVGPOST=0.9967;RSQ=0.9158;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21433892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6311;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21433893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3263;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 21433901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21434031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1217;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21434208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21434236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6932;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21434553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21434584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9445;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21434691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1139;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21434765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6357;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21434889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8886;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21434985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435125 . CT C 248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21435149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21435242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3252;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0007;THETA=0.0005;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 21435284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1033;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 21435318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8264;AVGPOST=0.9949;RSQ=0.9866;ERATE=0.0004;THETA=0.0005;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 21435321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8661;ERATE=0.0008;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21435374 . GA G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8789;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21435559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9298;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21435731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1038;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 21435740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7199;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21435919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21435932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8759;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21436006 rs35204297 GA G 9287 PASS INDEL;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0932;AVGPOST=0.9983;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 21436161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21436296 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7189;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21436357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21436409 . C CA 463 PASS INDEL;BAVGPOST=0.993;BRSQ=0.705;LDAF=0.0128;AVGPOST=0.9939;RSQ=0.8171;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21436609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21436611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8811;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21436637 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21436778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.9026;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21436883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9268;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21437105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21437389 . CA C 4669 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0429;AVGPOST=0.9982;RSQ=0.9823;ERATE=0.0004;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21437496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21437510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21437543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21437677 . T TA 151 PASS INDEL;BAVGPOST=0.996;BRSQ=0.587;LDAF=0.0130;AVGPOST=0.9875;RSQ=0.6197;ERATE=0.0018;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21437772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21437773 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21437847 . CTG C 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5616;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21437867 . T TA 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21437924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7176;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21438006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0413;AVGPOST=0.9985;RSQ=0.9829;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 21438116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.8086;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21438121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.9902;AVGPOST=0.9907;RSQ=0.6564;ERATE=0.0010;THETA=0.0004;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 21438191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21438343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21438354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0056;AVGPOST=0.9919;RSQ=0.4318;ERATE=0.0023;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21438445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8290;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21438491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6448;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21438661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21438826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21438841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21438866 . CAT C 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21438906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21438989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6336;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21439030 . AATGAG A 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21439075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21439156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0071;AVGPOST=0.9963;RSQ=0.7952;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21439208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6860;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21439331 . C CA 141 PASS INDEL;BAVGPOST=0.991;BRSQ=0.350;LDAF=0.0125;AVGPOST=0.9835;RSQ=0.5129;ERATE=0.0026;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21439360 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7347;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21439362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21439724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21439980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21440236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21440266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21440323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.7745;AVGPOST=0.9787;RSQ=0.9546;ERATE=0.0040;THETA=0.0003;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 21440353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9745;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21440363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5476;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21440536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6898;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21440551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8370;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21440783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0104;AVGPOST=0.9960;RSQ=0.8464;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21441071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21441079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0226;AVGPOST=0.9985;RSQ=0.9711;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21441104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4242;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 21441116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0308;AVGPOST=0.9983;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21441279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6766;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21441337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21441466 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0146;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21441474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7718;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21441497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7445;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21441569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21441576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21441691 . GAGTA G 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8619;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21441773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21441788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0097;AVGPOST=0.9976;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21441965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7606;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21442000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.6443;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21442079 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4970;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21442131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7135;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21442225 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21442246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0237;AVGPOST=0.9986;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21442432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7246;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21442456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0127;AVGPOST=0.9972;RSQ=0.9189;ERATE=0.0005;THETA=0.0020;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21442534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0163;AVGPOST=0.9988;RSQ=0.9699;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21442567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21442613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1804;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 21442750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7927;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21442890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21443036 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21443150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21443275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8172;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21443350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21443404 . TG T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7961;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21443502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21443679 . TAA T 2005 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0163;AVGPOST=0.9985;RSQ=0.9618;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21443768 . CA C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0034;AVGPOST=0.9958;RSQ=0.5744;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21444063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7134;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21444200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9994;RSQ=0.9820;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21444202 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21444227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9268;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21444397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1112;AVGPOST=0.9963;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 21444562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.908;LDAF=0.0629;AVGPOST=0.9862;RSQ=0.9204;ERATE=0.0005;THETA=0.0008;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21444571 . TA T 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0061;AVGPOST=0.9913;RSQ=0.4489;ERATE=0.0011;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21444599 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0093;AVGPOST=0.9964;RSQ=0.8340;ERATE=0.0009;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21444609 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.5605;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21444618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21444628 . G GA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5472;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21444641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4557;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21444683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0112;AVGPOST=0.9963;RSQ=0.8810;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21444724 rs35397570 CTTAT C 45525 PASS INDEL;BAVGPOST=0.968;BRSQ=0.947;LDAF=0.4532;AVGPOST=0.9149;RSQ=0.8822;ERATE=0.0236;THETA=0.0003;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 21444752 rs35397570 TTATC T 71774 PASS INDEL;BAVGPOST=0.990;BRSQ=0.509;LDAF=0.9898;AVGPOST=0.9860;RSQ=0.4534;ERATE=0.0024;THETA=0.0003;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 21444753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8332;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21444792 . TC T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5441;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21445098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21445125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4924;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21445128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7214;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21445445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9111;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21445465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2187;AVGPOST=0.9860;RSQ=0.9710;ERATE=0.0013;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 21445470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0175;AVGPOST=0.9979;RSQ=0.9497;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21445555 . T TA 1201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9983;RSQ=0.9433;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21445606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1815;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 21445819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6283;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21445931 rs59265401 G GT 2266 PASS INDEL;BAVGPOST=0.963;BRSQ=0.760;LDAF=0.0989;AVGPOST=0.9274;RSQ=0.6726;ERATE=0.0250;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 21445999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.741;LDAF=0.0519;AVGPOST=0.9618;RSQ=0.7056;ERATE=0.0058;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21446095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7829;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21446101 . GC G 145 PASS INDEL;BAVGPOST=0.988;BRSQ=0.655;LDAF=0.0189;AVGPOST=0.9829;RSQ=0.6555;ERATE=0.0024;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21446110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1830;AVGPOST=0.9941;RSQ=0.9875;ERATE=0.0005;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 21446116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6802;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21446158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3016;AVGPOST=0.9915;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 21446258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7431;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21446269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.889;LDAF=0.0280;AVGPOST=0.9941;RSQ=0.9194;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21446359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1283;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0002;THETA=0.0002;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 21446550 . ATTTC A 315 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21446694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2793;AVGPOST=0.9967;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 21446715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0142;AVGPOST=0.9952;RSQ=0.8648;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21446837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.6092;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21446838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.8979;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21446849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1452;AVGPOST=0.9974;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 21447061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21447220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9640;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21447305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21447396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21447401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2487;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 21447412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9989;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21447423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6594;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21447429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7489;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21447507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7496;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21447508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5078;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0006;THETA=0.0001;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 21447527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9401;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21447612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2487;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 21447658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21447724 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1301;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 21447849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6592;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21447859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4789;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 21447929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7030;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21447934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7714;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21447936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2338;AVGPOST=0.9958;RSQ=0.9917;ERATE=0.0013;THETA=0.0001;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 21448049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21448168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0581;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 21448187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21448288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21448310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21448491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0763;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 21448555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21448572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21448583 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7294;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21448691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0155;AVGPOST=0.9987;RSQ=0.9690;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21448739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7794;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21448832 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5253;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21448837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21449080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21449264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21449364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21449429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1238;AVGPOST=0.9972;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 21449433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0627;AVGPOST=0.9993;RSQ=0.9949;ERATE=0.0003;THETA=0.0036;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 21449535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21449610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2340;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 21449765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4587;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 21449843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0087;AVGPOST=0.9963;RSQ=0.8188;ERATE=0.0004;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21449960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6967;ERATE=0.0005;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21449963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9761;AVGPOST=0.9992;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=2132;AN=2184 GT:DS:GL:BD 0.97619045 1
1 21449999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7769;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21450009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4619;AVGPOST=0.9965;RSQ=0.9951;ERATE=0.0003;THETA=0.0018;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 21450101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21450148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21450239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0311;AVGPOST=0.9991;RSQ=0.9879;ERATE=0.0003;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21450240 . TTG T 252 PASS INDEL;BAVGPOST=0.976;BRSQ=0.640;LDAF=0.0480;AVGPOST=0.9504;RSQ=0.5480;ERATE=0.0196;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21450258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1097;AVGPOST=0.9958;RSQ=0.9840;ERATE=0.0007;THETA=0.0131;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 21450370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8333;ERATE=0.0004;THETA=0.0103;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21450442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4371;ERATE=0.0005;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21450513 . G GA 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4442;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21450514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4680;AVGPOST=0.9915;RSQ=0.9871;ERATE=0.0012;THETA=0.0004;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 21450628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0316;AVGPOST=0.9993;RSQ=0.9897;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21450698 . GGA G 631 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0074;AVGPOST=0.9968;RSQ=0.8377;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21450758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9614;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21450814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9518;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21450815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5043;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21450905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21450931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0064;AVGPOST=0.9980;RSQ=0.8820;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21451023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5890;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21451055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8720;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21451117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21451155 . GTTA G 177 PASS INDEL;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8301;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21451241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21451316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2455;AVGPOST=0.9950;RSQ=0.9908;ERATE=0.0005;THETA=0.0004;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 21451405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6800;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21451502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21451629 . GAA G 57008 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3249;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 21451684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21452014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5536;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21452172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21452245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.6912;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21452263 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5873;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21452344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5800;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21452466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21452532 rs112234890 A ATG 2659 PASS INDEL;BAVGPOST=0.942;BRSQ=0.703;LDAF=0.1139;AVGPOST=0.9333;RSQ=0.7486;ERATE=0.0087;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 21452548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.716;LDAF=0.0245;AVGPOST=0.9814;RSQ=0.7026;ERATE=0.0010;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21452558 . GAAGT G 308 PASS INDEL;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0080;AVGPOST=0.9927;RSQ=0.6604;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21452721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9072;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21452759 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3298;AVGPOST=0.9950;RSQ=0.9922;ERATE=0.0006;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 21452799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21453228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21453328 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5186;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453361 . TG T 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21453460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21453485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7771;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21453545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21453581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21453593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21453609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7676;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21453798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1531;AVGPOST=0.9951;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 21453875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21453914 . CT C 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21453973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0796;AVGPOST=0.9964;RSQ=0.9823;ERATE=0.0004;THETA=0.0027;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 21454036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5261;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21454122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8466;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21454183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454213 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4713;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9036;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21454295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7693;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21454301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21454365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1517;AVGPOST=0.9968;RSQ=0.9908;ERATE=0.0005;THETA=0.0003;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 21454483 . C CA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5592;ERATE=0.0007;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21454500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21454520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21454588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21454628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6624;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21454813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6876;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21454894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21455052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8371;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21455115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21455140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0104;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21455160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9586;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21455163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21455182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8034;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21455234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9989;RSQ=0.9814;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21455267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21455302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21455316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21455324 . G GA 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6024;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21455336 . T TA 2891 PASS INDEL;BAVGPOST=0.993;BRSQ=0.933;LDAF=0.0602;AVGPOST=0.9821;RSQ=0.8810;ERATE=0.0049;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 21455397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7682;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21455417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8257;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21455472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3061;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 21455495 . A AG 832 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21455510 . A AT 826 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8958;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21455511 . GTTA G 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5670;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21455517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21455603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5653;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21455638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21455642 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9677;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21455668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8728;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21455838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7513;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21456129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4619;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7579;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21456215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6459;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21456294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0105;AVGPOST=0.9954;RSQ=0.8203;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21456413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0527;AVGPOST=0.9980;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 21456440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.2814;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21456442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21456443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8374;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21456460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0449;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21456481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21456506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7351;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21456584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6531;AVGPOST=0.9911;RSQ=0.9856;ERATE=0.0010;THETA=0.0002;AC=1426;AN=2184 GT:DS:GL:BD 0.65293038 1
1 21456630 . G GA 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5559;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0096;AVGPOST=0.9964;RSQ=0.8697;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21456678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8922;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21456811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6473;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21456926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.4931;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21456936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21456966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6492;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21457004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0416;AVGPOST=0.9975;RSQ=0.9758;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 21457016 . TGATA T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0044;AVGPOST=0.9948;RSQ=0.5754;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21457055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0043;AVGPOST=0.9953;RSQ=0.5797;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21457155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0107;AVGPOST=0.9957;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21457182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21457248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21457321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21457345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21457359 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21457444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6235;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21457593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6658;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21457612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7908;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21457634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9369;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21457789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6817;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21457805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21457812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21457929 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0887;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 21457942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9586;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21458110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21458136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21458618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21458768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21458835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21458872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21458890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21458969 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21459032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9552;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21459060 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21459147 . ACT A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4105;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21459222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2172;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 21459269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0097;AVGPOST=0.9966;RSQ=0.8562;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21459357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21459366 . TA T 382 PASS INDEL;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0083;AVGPOST=0.9983;RSQ=0.9083;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21459377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21459382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9671;ERATE=0.0003;THETA=0.0038;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21459456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5278;ERATE=0.0005;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21459627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3767;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21459665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.964;LDAF=0.1936;AVGPOST=0.9895;RSQ=0.9747;ERATE=0.0010;THETA=0.0003;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 21459722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3142;ERATE=0.0006;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21459736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.949;LDAF=0.2630;AVGPOST=0.9885;RSQ=0.9781;ERATE=0.0015;THETA=0.0002;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 21459754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0302;AVGPOST=0.9962;RSQ=0.9469;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21459800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.791;LDAF=0.0102;AVGPOST=0.9941;RSQ=0.7712;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21459815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1290;AVGPOST=0.9802;RSQ=0.9284;ERATE=0.0021;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21459839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9960;AVGPOST=0.9983;RSQ=0.7978;ERATE=0.0005;THETA=0.0005;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 21459876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9959;AVGPOST=0.9980;RSQ=0.8255;ERATE=0.0003;THETA=0.0004;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 21459887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4595;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0014;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 21460011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4279;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21460051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21460096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9652;ERATE=0.0005;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21460172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21460197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21460559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0722;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21460580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21460616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21460624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21460625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6279;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21460800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0110;AVGPOST=0.9974;RSQ=0.9092;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21460862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0722;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0004;THETA=0.0008;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21460877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21460878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9977;RSQ=0.8361;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21460899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21460970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2816;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 21461038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1057;AVGPOST=0.9979;RSQ=0.9911;ERATE=0.0004;THETA=0.0005;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 21461049 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8466;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21461063 . CAT C 145 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8066;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21461390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.9164;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21461495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5841;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21461638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21461688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21461851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21461952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21462045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21462103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8628;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21462118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21462299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21462300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3183;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0008;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 21462443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8503;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21462456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21462514 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4086;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 21462568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21462632 . A ACT 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0041;AVGPOST=0.9958;RSQ=0.6370;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21462654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.628;LDAF=0.0193;AVGPOST=0.9788;RSQ=0.6038;ERATE=0.0025;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21462765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8092;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21462943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21463108 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21463126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9256;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21463291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6948;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21463427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21463526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21463666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8318;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21463839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21463908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8387;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21464022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21464054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0993;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 21464445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1092;AVGPOST=0.9980;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 21464451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.889;LDAF=0.1180;AVGPOST=0.9862;RSQ=0.9472;ERATE=0.0017;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 21464512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.5729;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21464607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.458;LDAF=0.0059;AVGPOST=0.9938;RSQ=0.5627;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21464608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5459;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21464913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8055;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21464922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6766;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21464928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4338;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21465238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0899;AVGPOST=0.9988;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 21465273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21465361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6339;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21465521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0055;AVGPOST=0.9962;RSQ=0.7234;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21465756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0108;AVGPOST=0.9959;RSQ=0.8483;ERATE=0.0008;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21465757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.7005;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21465786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8439;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21465838 . A AT 103 PASS INDEL;BAVGPOST=0.988;BRSQ=0.536;LDAF=0.0321;AVGPOST=0.9599;RSQ=0.4919;ERATE=0.0068;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21465878 . TATC T 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6747;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21465904 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0902;AVGPOST=0.9966;RSQ=0.9847;ERATE=0.0004;THETA=0.0002;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 21465996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21465999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3153;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 21466081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9425;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21466189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.400;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6381;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21466273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21466312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1023;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0004;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 21466313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.0892;AVGPOST=0.9977;RSQ=0.9883;ERATE=0.0006;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 21466564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7743;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21466773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21466784 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7280;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21466896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21466958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21466966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1530;AVGPOST=0.9974;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 21466994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21467244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6579;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21467306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9655;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21467315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4671;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21467324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5605;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21467339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7255;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21467444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8748;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21467450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8224;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21467468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.949;LDAF=0.0790;AVGPOST=0.9922;RSQ=0.9648;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 21467525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.949;LDAF=0.0801;AVGPOST=0.9919;RSQ=0.9638;ERATE=0.0004;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21467526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21467545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21467566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5416;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21467568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4512;AVGPOST=0.9907;RSQ=0.9863;ERATE=0.0021;THETA=0.0004;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 21467646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21467722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21467783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21467844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21467876 . G GT 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6109;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21467912 . CT C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7845;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21468003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21468008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7670;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21468070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8847;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21468168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9142;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21468183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21468315 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3249;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 21468371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9023;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21468382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21468396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8331;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21468433 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21468660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21468668 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0051;AVGPOST=0.9938;RSQ=0.5542;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21468676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21468690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9123;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21468845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7280;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21468942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7796;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21469015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9611;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21469266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8431;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21469315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21469430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.923;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21469431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21469610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21469677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21469757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21469816 . CA C 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5293;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21469840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21469886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3556;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 21469901 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21469952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0624;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0002;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 21469960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9780;AVGPOST=0.9983;RSQ=0.9732;ERATE=0.0002;THETA=0.0002;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 21469977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9158;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21470203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21470251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0080;AVGPOST=0.9990;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21470281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21470282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3225;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 21470441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0259;AVGPOST=0.9964;RSQ=0.9501;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21470536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8696;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21470548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9082;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21470577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21470608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8779;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21470645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0630;AVGPOST=0.9951;RSQ=0.9692;ERATE=0.0005;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 21470651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21470719 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21470803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21471061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21471126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0612;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21471229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5364;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21471270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7546;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21471317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6088;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21471359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21471436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0030;AVGPOST=0.9960;RSQ=0.5319;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21471525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6673;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21471558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7257;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21471578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21471608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8075;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21471757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0251;AVGPOST=0.9965;RSQ=0.9489;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21472027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21472038 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0192;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21472071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0185;AVGPOST=0.9991;RSQ=0.9779;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21472093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8136;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21472132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21472161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1574;AVGPOST=0.9835;RSQ=0.9563;ERATE=0.0043;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 21472185 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.967;LDAF=0.4803;AVGPOST=0.9743;RSQ=0.9648;ERATE=0.0037;THETA=0.0003;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 21472186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6255;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21472295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8723;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21472296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21472317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9816;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 21472336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4199;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21472400 . GAATA G 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21472462 . ATATACAG A 280 PASS INDEL;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5283;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21472468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21472639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0638;AVGPOST=0.9988;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21472656 . CA C 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0035;AVGPOST=0.9959;RSQ=0.5402;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21472663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2290;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 21472670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9594;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21472717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21472733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21472759 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5268;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21472829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4796;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21473010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0137;AVGPOST=0.9979;RSQ=0.9291;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21473046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4356;AVGPOST=0.9844;RSQ=0.9768;ERATE=0.0017;THETA=0.0003;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 21473075 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0064;AVGPOST=0.9950;RSQ=0.7041;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21473179 . CTA C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5776;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21473289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2280;AVGPOST=0.9971;RSQ=0.9933;ERATE=0.0007;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 21473435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2083;AVGPOST=0.9954;RSQ=0.9883;ERATE=0.0007;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 21473469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0192;AVGPOST=0.9974;RSQ=0.9486;ERATE=0.0005;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21473555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9150;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21473559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21474043 . CAAAT C 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6770;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21474171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6604;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21474203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6670;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21474212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.940;LDAF=0.0627;AVGPOST=0.9976;RSQ=0.9827;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21474298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7705;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21474325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8647;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21474334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9990;RSQ=0.9831;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21474351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21474461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0542;AVGPOST=0.9984;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 21474548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4607;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21474645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0537;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 21474744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.8935;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21474765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.701;LDAF=0.0125;AVGPOST=0.9862;RSQ=0.5583;ERATE=0.0022;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21474798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0766;AVGPOST=0.9951;RSQ=0.9751;ERATE=0.0004;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 21474871 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1562;AVGPOST=0.9968;RSQ=0.9907;ERATE=0.0006;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 21474892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0227;AVGPOST=0.9924;RSQ=0.8698;ERATE=0.0008;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21474965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.2282;AVGPOST=0.9873;RSQ=0.9751;ERATE=0.0012;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 21475018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0064;AVGPOST=0.9941;RSQ=0.6614;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21475050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7242;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21475275 . GAATA G 1552 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9372;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21475292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21475316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6537;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21475354 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0639;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21475435 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21475524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9995;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 21475561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 21475673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21475849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9817;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 21475876 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21475975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21476013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21476097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0637;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21476143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.942;LDAF=0.0912;AVGPOST=0.9920;RSQ=0.9642;ERATE=0.0006;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 21476319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6663;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21476335 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21476414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.9038;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21476692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7375;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21476802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2293;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 21476867 . A AGGG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21476882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21476892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21476947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8737;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21476956 . ACCT A 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21477137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9422;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0004;THETA=0.0019;AC=2058;AN=2184 GT:DS:GL:BD 0.94230771 1
1 21477331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7840;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 21477424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21477477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9604;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21477545 . CTG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4821;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21477622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21477718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21477749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6052;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21477978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21478038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21478255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7814;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0006;THETA=0.0007;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 21478284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4911;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21478413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5872;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21478514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9164;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21478639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6322;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21478653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21478732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7955;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21478880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21478881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9428;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=2060;AN=2184 GT:DS:GL:BD 0.94322342 1
1 21478960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9578;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21479187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21479212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7930;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21479237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21479302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21479375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9279;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21479411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6001;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21479478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21479551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0109;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21479650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9426;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21479654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21479663 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7790;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 21479664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8598;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21479778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21479822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4805;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21479836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5391;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21479885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8188;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21480009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0210;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21480211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0027;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21480224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0983;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0003;THETA=0.0010;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 21480231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21480322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21480356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8685;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21480371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21480456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21480496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21480571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21480625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4644;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21480702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21481017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2212;AVGPOST=0.9931;RSQ=0.9841;ERATE=0.0004;THETA=0.0040;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 21481063 . G GA 854 PASS INDEL;BAVGPOST=0.985;BRSQ=0.700;LDAF=0.0407;AVGPOST=0.9619;RSQ=0.6166;ERATE=0.0069;THETA=0.0013;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21481228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21481404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0075;AVGPOST=0.9984;RSQ=0.9265;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21481410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0492;AVGPOST=0.9992;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 21481411 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21481428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0020;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21481568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0485;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 21481595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21481659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21481700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21481704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21481712 . TTTC T 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.6342;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21481729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21481800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21481919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21482145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0801;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21482185 rs113406301 AG A 974 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9586;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21482234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7601;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21482384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21482441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1221;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 21482524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21482547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8919;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=1949;AN=2184 GT:DS:GL:BD 0.89239925 1
1 21482551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.543;LDAF=0.0044;AVGPOST=0.9946;RSQ=0.5217;ERATE=0.0019;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21482596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8914;AVGPOST=0.9974;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=1949;AN=2184 GT:DS:GL:BD 0.89239925 1
1 21482636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21482661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21482773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6299;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21482808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21482954 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0099;AVGPOST=0.9979;RSQ=0.9072;ERATE=0.0008;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21482966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21482986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5972;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21482991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8955;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21483032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8540;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21483043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2423;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 21483076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7202;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21483195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.5970;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21483278 . AAC A 19 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21483365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21483430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0653;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0004;THETA=0.0008;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21483493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21483517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0205;AVGPOST=0.9991;RSQ=0.9843;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21483537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2127;AVGPOST=0.9971;RSQ=0.9930;ERATE=0.0007;THETA=0.0004;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 21483602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2110;AVGPOST=0.9969;RSQ=0.9929;ERATE=0.0008;THETA=0.0007;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 21483629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.2426;AVGPOST=0.9947;RSQ=0.9900;ERATE=0.0008;THETA=0.0006;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 21483713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4232;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21483775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21483834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21483836 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21483869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21483886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2113;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0005;THETA=0.0006;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 21483893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0204;AVGPOST=0.9985;RSQ=0.9730;ERATE=0.0003;THETA=0.0045;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21484193 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2502;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0007;THETA=0.0006;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 21484223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0621;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 21484283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0194;AVGPOST=0.9990;RSQ=0.9763;ERATE=0.0003;THETA=0.0022;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21484390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4452;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21484412 . GT G 13656 PASS INDEL;BAVGPOST=0.984;BRSQ=0.957;LDAF=0.2155;AVGPOST=0.9866;RSQ=0.9711;ERATE=0.0017;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 21484494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6215;AVGPOST=0.9919;RSQ=0.9867;ERATE=0.0024;THETA=0.0003;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 21484687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21484704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21484799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21484853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5529;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21484878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4325;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21484895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6017;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21484896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21484901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21484912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6233;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 21484999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6246;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 21485109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4934;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21485277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0069;AVGPOST=0.9965;RSQ=0.7989;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21485486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.404;LDAF=0.0056;AVGPOST=0.9912;RSQ=0.3646;ERATE=0.0010;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21485514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4207;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21485578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.954;LDAF=0.5194;AVGPOST=0.9602;RSQ=0.9386;ERATE=0.0071;THETA=0.0003;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 21485684 . A AG 1125 PASS INDEL;BAVGPOST=0.927;BRSQ=0.612;LDAF=0.1307;AVGPOST=0.9014;RSQ=0.6533;ERATE=0.0076;THETA=0.0002;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 21485755 . A AG 439 PASS INDEL;BAVGPOST=0.847;BRSQ=0.434;LDAF=0.1581;AVGPOST=0.8478;RSQ=0.5673;ERATE=0.0061;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 21485764 . AG A 9635 PASS INDEL;BAVGPOST=0.897;BRSQ=0.780;LDAF=0.3176;AVGPOST=0.8350;RSQ=0.7196;ERATE=0.0326;THETA=0.0007;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 21485770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.793;LDAF=0.2765;AVGPOST=0.8778;RSQ=0.7698;ERATE=0.0197;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 21485771 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21485812 . G GT 8448 PASS INDEL;BAVGPOST=0.980;BRSQ=0.940;LDAF=0.1813;AVGPOST=0.9762;RSQ=0.9373;ERATE=0.0049;THETA=0.0003;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 21485827 . T TG 1126 PASS INDEL;BAVGPOST=0.952;BRSQ=0.567;LDAF=0.0478;AVGPOST=0.9555;RSQ=0.6574;ERATE=0.0006;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 21485834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21485893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21485955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21486128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.970;LDAF=0.5162;AVGPOST=0.9787;RSQ=0.9701;ERATE=0.0063;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21486143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21486165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5865;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21486280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7710;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21486394 . AAAT A 5893 PASS INDEL;BAVGPOST=0.967;BRSQ=0.893;LDAF=0.1771;AVGPOST=0.9573;RSQ=0.8827;ERATE=0.0064;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 21486551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.999;LDAF=0.6239;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 21486567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21486578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8304;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21486871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21486874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5265;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0012;THETA=0.0005;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 21486907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7633;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21486954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21486961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1187;AVGPOST=0.9981;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 21487052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0614;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21487135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9935;RSQ=0.8165;ERATE=0.0006;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21487529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.809;LDAF=0.6287;AVGPOST=0.8681;RSQ=0.8059;ERATE=0.0171;THETA=0.0005;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 21487530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8965;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21488508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.815;LDAF=0.1632;AVGPOST=0.9677;RSQ=0.9182;ERATE=0.0012;THETA=0.0006;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 21488513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21489671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5658;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21489722 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0811;AVGPOST=0.9977;RSQ=0.9888;ERATE=0.0006;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 21489757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.638;BRSQ=0.196;LDAF=0.3273;AVGPOST=0.6710;RSQ=0.3764;ERATE=0.0179;THETA=0.0011;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 21490652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21491143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.482;LDAF=0.0334;AVGPOST=0.9755;RSQ=0.7146;ERATE=0.0005;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21491959 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1126;AVGPOST=0.9907;RSQ=0.9710;ERATE=0.0006;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 21492395 . GT G 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21492476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21492593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21492706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21492784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8636;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21492881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8581;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21493054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5950;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21493080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21493131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21493166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5792;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21493197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0321;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0005;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21493258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6342;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21493300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21493479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0109;AVGPOST=0.9984;RSQ=0.9466;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21493480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6025;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0008;THETA=0.0008;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 21493744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0128;AVGPOST=0.9968;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21493811 . GTGGATT G 2680 PASS INDEL;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9294;ERATE=0.0004;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21493820 . TG T 20748 PASS INDEL;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.5918;AVGPOST=0.9721;RSQ=0.9605;ERATE=0.0051;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 21493968 rs60301765 GC G 80680 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6085;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 21493969 rs112750263 A AG 38027 PASS INDEL;BAVGPOST=0.965;BRSQ=0.885;LDAF=0.8214;AVGPOST=0.9718;RSQ=0.9288;ERATE=0.0029;THETA=0.0004;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 21494068 rs61381960 G GT 72200 PASS INDEL;BAVGPOST=0.926;BRSQ=0.836;LDAF=0.7093;AVGPOST=0.9020;RSQ=0.8338;ERATE=0.0215;THETA=0.0005;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 21494070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7832;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21494092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8638;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21494157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0005;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21494205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8741;AVGPOST=0.9965;RSQ=0.9871;ERATE=0.0009;THETA=0.0006;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 21494506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7576;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21494523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8630;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 21494546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21494687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21494855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21494901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5452;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21494946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21495025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9973;RSQ=0.3293;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495038 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8626;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 21495109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21495157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4845;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8899;ERATE=0.0003;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21495286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1300;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 21495323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21495520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1472;AVGPOST=0.9902;RSQ=0.9699;ERATE=0.0005;THETA=0.0003;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 21495578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8636;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21495674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5872;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21495773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9400;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21495820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21495838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8645;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21496008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21496074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0006;THETA=0.0013;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21496146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0054;AVGPOST=0.9944;RSQ=0.5993;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21496185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6024;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21496194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7698;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21496202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8635;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21496303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8636;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21496323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21496465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4802;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21496512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21496549 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21496638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8753;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0004;THETA=0.0005;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 21496806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8641;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 21496860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21496898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6921;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21496906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8640;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0009;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 21497066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21497285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21497357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21497405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3822;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21497647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21497963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21498004 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21498303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21498363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21498453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9059;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21498497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21498657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5088;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21498716 . GGTAA G 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7100;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21498825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21498869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8703;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21498987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21499073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21499268 . GTC G 105 PASS INDEL;BAVGPOST=0.989;BRSQ=0.686;LDAF=0.0377;AVGPOST=0.9557;RSQ=0.5213;ERATE=0.0130;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21499458 . CTT C 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21499490 rs66858521 T TA 19136 PASS INDEL;BAVGPOST=0.969;BRSQ=0.939;LDAF=0.3289;AVGPOST=0.9469;RSQ=0.9120;ERATE=0.0106;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 21499531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.5252;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21499537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6050;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21499552 . TA T 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21499956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0136;AVGPOST=0.9983;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21500024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21500157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21500202 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9462;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21500223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21500636 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21500821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9374;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21500962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21501050 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0002;THETA=0.0041;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21501251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9162;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21501666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21501681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1460;AVGPOST=0.9976;RSQ=0.9925;ERATE=0.0004;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 21501773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0282;AVGPOST=0.9991;RSQ=0.9868;ERATE=0.0003;THETA=0.0013;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21501775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1858;AVGPOST=0.9924;RSQ=0.9804;ERATE=0.0030;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 21501827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6975;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21502070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21502085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0004;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21502189 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0132;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0003;THETA=0.0026;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21502293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7589;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21502372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 21502549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.3578;AVGPOST=0.9946;RSQ=0.9914;ERATE=0.0008;THETA=0.0002;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 21502726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3574;AVGPOST=0.9802;RSQ=0.9679;ERATE=0.0041;THETA=0.0003;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 21502740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.5105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21502769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9030;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21502806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21502858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21502866 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1709;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 21502897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7388;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21502933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3753;AVGPOST=0.9958;RSQ=0.9924;ERATE=0.0008;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 21503000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4292;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21503039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21503134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0145;AVGPOST=0.9949;RSQ=0.8663;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21503253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21503262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21503265 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9848;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 21503287 rs111547919 CAG C 29092 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3611;AVGPOST=0.9953;RSQ=0.9921;ERATE=0.0008;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 21503334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21503376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21503596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3535;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 21503613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21503621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21503786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21503805 . C CT 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8012;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21503807 . C CT 534 PASS INDEL;BAVGPOST=0.898;BRSQ=0.581;LDAF=0.1128;AVGPOST=0.9143;RSQ=0.7316;ERATE=0.0014;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 21503841 rs60112957 T TA 30874 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2477;AVGPOST=0.9874;RSQ=0.9782;ERATE=0.0029;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 21503844 . CA C 297 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21503991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9141;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21504025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21504093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21504109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8314;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21504148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8707;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21504279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8886;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21504362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21504541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.7703;AVGPOST=0.9856;RSQ=0.9679;ERATE=0.0101;THETA=0.0003;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 21504703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3584;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 21504794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21504857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21504886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21505006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9848;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 21505047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9849;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 21505089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0880;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 21505142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21505260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21505262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6615;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21505298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21505374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8596;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21505441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21505559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21505692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21505738 . T TA 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7567;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21506050 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3533;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 21506211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21506282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21506287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21506386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3584;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0007;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 21506541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3563;AVGPOST=0.9926;RSQ=0.9889;ERATE=0.0006;THETA=0.0003;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 21506613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3563;AVGPOST=0.9907;RSQ=0.9850;ERATE=0.0013;THETA=0.0004;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 21506693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7944;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21506728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2803;AVGPOST=0.9830;RSQ=0.9695;ERATE=0.0027;THETA=0.0009;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 21506859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8257;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21506930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2777;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0007;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 21506943 rs71087958 A AT 15548 PASS INDEL;BAVGPOST=0.956;BRSQ=0.914;LDAF=0.3605;AVGPOST=0.8901;RSQ=0.8180;ERATE=0.0284;THETA=0.0004;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 21507000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.3471;AVGPOST=0.9809;RSQ=0.9680;ERATE=0.0020;THETA=0.0008;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 21507021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.3466;AVGPOST=0.9899;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 21507035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.3529;AVGPOST=0.9900;RSQ=0.9843;ERATE=0.0007;THETA=0.0013;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 21507046 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.7760;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21507105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0291;AVGPOST=0.9957;RSQ=0.9407;ERATE=0.0005;THETA=0.0022;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21507153 rs71586704 AG A 11297 PASS INDEL;BAVGPOST=0.903;BRSQ=0.811;LDAF=0.3136;AVGPOST=0.9162;RSQ=0.8648;ERATE=0.0078;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 21507192 . GT G 1332 PASS INDEL;BAVGPOST=0.889;BRSQ=0.775;LDAF=0.2773;AVGPOST=0.9286;RSQ=0.8758;ERATE=0.0015;THETA=0.0006;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 21507195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.434;LDAF=0.0082;AVGPOST=0.9902;RSQ=0.5397;ERATE=0.0010;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21507284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0043;AVGPOST=0.9941;RSQ=0.4486;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21507327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9969;RSQ=0.8345;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21507410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21507670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.0681;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21507671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.864;LDAF=0.9285;AVGPOST=0.9854;RSQ=0.9204;ERATE=0.0009;THETA=0.0010;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 21507783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6112;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21507838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5861;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21507848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0268;AVGPOST=0.9983;RSQ=0.9723;ERATE=0.0005;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21507959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.777;LDAF=0.0166;AVGPOST=0.9968;RSQ=0.9322;ERATE=0.0003;THETA=0.0016;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21508085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6257;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21508128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.715;LDAF=0.9266;AVGPOST=0.9862;RSQ=0.9194;ERATE=0.0008;THETA=0.0009;AC=2030;AN=2184 GT:DS:GL:BD 0.92948717 1
1 21508135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4258;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21508164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3633;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21508313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21508390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21508579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3674;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21508582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.359;LDAF=0.0129;AVGPOST=0.9839;RSQ=0.5437;ERATE=0.0010;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21508626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5990;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21508627 . TG T 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0054;AVGPOST=0.9957;RSQ=0.7013;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21508684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.632;LDAF=0.8910;AVGPOST=0.9243;RSQ=0.7043;ERATE=0.0078;THETA=0.0006;AC=1990;AN=2184 GT:DS:GL:BD 0.91117215 1
1 21508867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.846;LDAF=0.0273;AVGPOST=0.9979;RSQ=0.9704;ERATE=0.0004;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21509069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.903;LDAF=0.8596;AVGPOST=0.9662;RSQ=0.8973;ERATE=0.0028;THETA=0.0006;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 21509166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9977;RSQ=0.8615;ERATE=0.0004;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21509184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.946;LDAF=0.1460;AVGPOST=0.9878;RSQ=0.9657;ERATE=0.0006;THETA=0.0016;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 21509188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9359;AVGPOST=0.9982;RSQ=0.9873;ERATE=0.0004;THETA=0.0005;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 21509360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.751;LDAF=0.0166;AVGPOST=0.9908;RSQ=0.7884;ERATE=0.0005;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21509457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.736;LDAF=0.8197;AVGPOST=0.8683;RSQ=0.6642;ERATE=0.0143;THETA=0.0009;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 21509540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.862;LDAF=0.8518;AVGPOST=0.9391;RSQ=0.8322;ERATE=0.0046;THETA=0.0011;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 21510588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.864;LDAF=0.9210;AVGPOST=0.9785;RSQ=0.8910;ERATE=0.0010;THETA=0.0019;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 21510645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4801;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21510662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6525;ERATE=0.0006;THETA=0.0075;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21510672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.280;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6808;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21510684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6318;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21510709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.749;LDAF=0.8872;AVGPOST=0.9769;RSQ=0.9134;ERATE=0.0006;THETA=0.0010;AC=1935;AN=2184 GT:DS:GL:BD 0.88598901 1
1 21510718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.952;LDAF=0.4415;AVGPOST=0.9607;RSQ=0.9468;ERATE=0.0032;THETA=0.0016;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 21510747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21510801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7636;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21510839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6408;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21511052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5784;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21511124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9291;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21511138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7737;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21511375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21511407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4306;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21511447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21511464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0864;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 21511479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6823;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 21511505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21511522 . C CA 117 PASS INDEL;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0079;AVGPOST=0.9912;RSQ=0.5678;ERATE=0.0022;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21511596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0602;AVGPOST=0.9980;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21511677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6134;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21511715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21511762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21511819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9683;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21511978 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6424;AVGPOST=0.9965;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 21512267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21512296 . A AC 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21512402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21512525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9153;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21512563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8814;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21512755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0301;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21512953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1027;AVGPOST=0.9976;RSQ=0.9908;ERATE=0.0004;THETA=0.0007;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 21512997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8974;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21513057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2442;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 21513075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0149;AVGPOST=0.9973;RSQ=0.9328;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21513076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21513131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21513262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21513389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9986;RSQ=0.9667;ERATE=0.0004;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21513390 . CAAG C 208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8176;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21513415 . C CT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21513428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0339;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21513483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21513558 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21513574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21513634 . GGA G 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21513752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5891;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21513779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5265;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21513800 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7789;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21513919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21513976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21514078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8492;ERATE=0.0004;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21514125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9160;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21514292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8186;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21514381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1020;AVGPOST=0.9962;RSQ=0.9838;ERATE=0.0005;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 21514454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0324;AVGPOST=0.9973;RSQ=0.9649;ERATE=0.0005;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21514469 . GTTC G 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.4446;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21514482 . CT C 1092 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0339;AVGPOST=0.9981;RSQ=0.9783;ERATE=0.0004;THETA=0.0015;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21514530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0125;AVGPOST=0.9912;RSQ=0.7154;ERATE=0.0012;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21514536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21514559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6145;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21514707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9260;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21514710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6027;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21514729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21514733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21514771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6326;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21514862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21515050 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21515135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21515161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0150;AVGPOST=0.9990;RSQ=0.9758;ERATE=0.0003;THETA=0.0018;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21515212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9636;ERATE=0.0004;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21515297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2443;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0026;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 21515414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21515492 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21515542 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0331;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21515842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0371;AVGPOST=0.9989;RSQ=0.9860;ERATE=0.0004;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21516028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21516409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.6418;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21516563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21516620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21516685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9365;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21516777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21516862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21517100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9984;RSQ=0.9828;ERATE=0.0003;THETA=0.0009;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21517235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9793;ERATE=0.0004;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21517276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6505;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21517410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0417;AVGPOST=0.9983;RSQ=0.9810;ERATE=0.0006;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 21517446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7810;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21517490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21517678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21517680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6810;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21517711 . T TA 291 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6742;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21517712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0275;AVGPOST=0.9986;RSQ=0.9783;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21517717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21517831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21517891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21517943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21517945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21517958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1548;AVGPOST=0.9961;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 21518030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8508;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21518078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21518133 . T TA 385 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.3871;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21518164 . AC A 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6636;ERATE=0.0008;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21518171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4733;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0005;THETA=0.0006;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 21518271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4704;AVGPOST=0.9935;RSQ=0.9899;ERATE=0.0010;THETA=0.0037;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 21518366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4770;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0006;THETA=0.0004;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 21518424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21518432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4765;AVGPOST=0.9953;RSQ=0.9926;ERATE=0.0008;THETA=0.0058;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 21518439 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4974;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0041;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 21518519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21518577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21518629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9499;ERATE=0.0003;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21518640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4453;ERATE=0.0009;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21518673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4711;AVGPOST=0.9889;RSQ=0.9830;ERATE=0.0021;THETA=0.0014;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 21518756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.9763;AVGPOST=0.9975;RSQ=0.9599;ERATE=0.0004;THETA=0.0009;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 21518782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8676;ERATE=0.0005;THETA=0.0110;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21518783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8057;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21518819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.5034;AVGPOST=0.9900;RSQ=0.9854;ERATE=0.0038;THETA=0.0071;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 21518881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21518887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21518967 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9597;AVGPOST=0.9991;RSQ=0.9911;ERATE=0.0003;THETA=0.0010;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 21518982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21519034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9654;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0012;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 21519048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9836;AVGPOST=0.9975;RSQ=0.9410;ERATE=0.0005;THETA=0.0006;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 21519068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8819;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21519148 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9659;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=2110;AN=2184 GT:DS:GL:BD 0.96611720 1
1 21519158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21519261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21519377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9598;AVGPOST=0.9987;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 21519395 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.9659;AVGPOST=0.9993;RSQ=0.9918;ERATE=0.0003;THETA=0.0006;AC=2110;AN=2184 GT:DS:GL:BD 0.96611720 1
1 21519478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0014;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21519536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21519541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21519680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7140;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21519713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0410;AVGPOST=0.9967;RSQ=0.9701;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21519756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21519784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5916;AVGPOST=0.9944;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 21519851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5915;AVGPOST=0.9950;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 21519854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5659;AVGPOST=0.9956;RSQ=0.9925;ERATE=0.0004;THETA=0.0105;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 21520075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21520082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21520136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520232 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7345;ERATE=0.0003;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21520255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0047;AVGPOST=0.9952;RSQ=0.6190;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21520343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7045;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0451;AVGPOST=0.9992;RSQ=0.9937;ERATE=0.0003;THETA=0.0014;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21520501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0003;THETA=0.0076;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21520590 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3923;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0004;THETA=0.0002;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 21520668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21520723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.8856;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21520758 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0195;AVGPOST=0.9973;RSQ=0.9455;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21520804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0200;AVGPOST=0.9950;RSQ=0.8980;ERATE=0.0006;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21520963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.451;LDAF=0.0012;AVGPOST=0.9980;RSQ=0.3391;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21520991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9518;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21521006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3804;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0006;THETA=0.0009;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 21521048 . GATTA G 991 PASS INDEL;BAVGPOST=0.984;BRSQ=0.582;LDAF=0.0239;AVGPOST=0.9740;RSQ=0.5561;ERATE=0.0044;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21521207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3726;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0007;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 21521210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3721;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 21521233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5111;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21521238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9680;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21521242 . CA C 1441 PASS INDEL;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8383;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21521246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5168;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21521325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21521335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21521409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21521478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21521493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0091;AVGPOST=0.9978;RSQ=0.9092;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21521567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3727;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 21521841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0099;AVGPOST=0.9973;RSQ=0.9012;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21521900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9291;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 21521961 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6255;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21521995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5511;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 21522058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522104 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7761;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21522177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3737;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 21522186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.9824;AVGPOST=0.9979;RSQ=0.9491;ERATE=0.0004;THETA=0.0007;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 21522252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522261 . T TTTA 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522424 rs67183589 CTCA C 59705 PASS INDEL;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.5507;AVGPOST=0.9923;RSQ=0.9869;ERATE=0.0026;THETA=0.0005;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 21522466 rs67714844 TC T 7385 PASS INDEL;BAVGPOST=0.901;BRSQ=0.830;LDAF=0.4476;AVGPOST=0.8596;RSQ=0.7996;ERATE=0.0258;THETA=0.0003;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 21522470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21522489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21522537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9069;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21522665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9289;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 21522796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21522826 . GT G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4874;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21523225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21523248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7034;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21523278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21523301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9252;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21523558 rs35681721 CTT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0004;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21523588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21523652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4211;AVGPOST=0.9939;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 21523712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0002;THETA=0.0037;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21523784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21523943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6701;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21524001 . T TTGAC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21524034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0114;AVGPOST=0.9993;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21524101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21524108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7720;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21524114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0111;AVGPOST=0.9978;RSQ=0.9102;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21524225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.943;LDAF=0.4410;AVGPOST=0.9628;RSQ=0.9440;ERATE=0.0029;THETA=0.0007;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 21524389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0075;AVGPOST=0.9975;RSQ=0.8729;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21524493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6803;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21524523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6717;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21524610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.0758;AVGPOST=0.9964;RSQ=0.9836;ERATE=0.0006;THETA=0.0001;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 21524630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21524747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8371;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21524797 . C CT 63 PASS INDEL;BAVGPOST=0.986;BRSQ=0.453;LDAF=0.0330;AVGPOST=0.9550;RSQ=0.4487;ERATE=0.0085;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21525004 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0224;AVGPOST=0.9976;RSQ=0.9518;ERATE=0.0006;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21525011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0674;AVGPOST=0.9944;RSQ=0.9716;ERATE=0.0003;THETA=0.0014;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 21525013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6113;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21525033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0164;AVGPOST=0.9973;RSQ=0.9377;ERATE=0.0005;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21525115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0748;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0017;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 21525194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.3328;AVGPOST=0.9763;RSQ=0.9617;ERATE=0.0043;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 21525198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21525282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21525288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7701;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21525350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6386;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21525361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21525380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21525387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.5346;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21525403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21525455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21525656 rs34050126 TACA T 37077 PASS INDEL;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.4031;AVGPOST=0.9863;RSQ=0.9788;ERATE=0.0009;THETA=0.0032;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 21525693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21525910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7872;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21525916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1442;AVGPOST=0.9943;RSQ=0.9849;ERATE=0.0003;THETA=0.0005;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 21525921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9509;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21525984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4256;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21525988 . A AT 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7593;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21526009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0745;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 21526089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21526134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0158;AVGPOST=0.9979;RSQ=0.9499;ERATE=0.0003;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21526227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21526338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0317;AVGPOST=0.9963;RSQ=0.9582;ERATE=0.0003;THETA=0.0014;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 21526354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21526486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21526515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7886;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21526527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0086;AVGPOST=0.9994;RSQ=0.9685;ERATE=0.0002;THETA=0.0039;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21526552 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21526555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21526725 . T TAA 2621 PASS INDEL;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0154;AVGPOST=0.9966;RSQ=0.9115;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21526782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0162;AVGPOST=0.9969;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21526810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21526896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.3172;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21527050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6885;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21527113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0061;AVGPOST=0.9947;RSQ=0.6797;ERATE=0.0006;THETA=0.0046;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21527153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7277;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21527205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0085;AVGPOST=0.9972;RSQ=0.8921;ERATE=0.0003;THETA=0.0032;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21527251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0048;AVGPOST=0.9959;RSQ=0.6700;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21527252 . TA T 43605 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.9981;AVGPOST=0.9965;RSQ=0.3128;ERATE=0.0006;THETA=0.0003;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 21527293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0093;AVGPOST=0.9922;RSQ=0.6668;ERATE=0.0009;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21527381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.779;LDAF=0.0178;AVGPOST=0.9944;RSQ=0.8739;ERATE=0.0004;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21527409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0331;AVGPOST=0.9957;RSQ=0.9552;ERATE=0.0006;THETA=0.0028;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21527435 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0245;AVGPOST=0.9965;RSQ=0.9408;ERATE=0.0003;THETA=0.0056;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21527448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21527599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0313;AVGPOST=0.9984;RSQ=0.9811;ERATE=0.0003;THETA=0.0095;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21527610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.8105;AVGPOST=0.9828;RSQ=0.9578;ERATE=0.0038;THETA=0.0010;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 21527793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7507;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21527814 . A AT 15 PASS INDEL;BAVGPOST=0.996;BRSQ=0.455;LDAF=0.0062;AVGPOST=0.9942;RSQ=0.6282;ERATE=0.0009;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21528008 . AAAAC A 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0034;AVGPOST=0.9946;RSQ=0.4710;ERATE=0.0003;THETA=0.0188;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21528079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0146;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21528109 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21528209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21528291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21528362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21528370 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0037;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 21528416 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21528472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6718;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21528506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7033;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21528600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21528641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9180;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21528866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21528913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9458;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21529152 . T TG 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9070;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21529194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.941;LDAF=0.0867;AVGPOST=0.9934;RSQ=0.9717;ERATE=0.0004;THETA=0.0021;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 21529273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1010;AVGPOST=0.9978;RSQ=0.9922;ERATE=0.0003;THETA=0.0010;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 21529322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21529491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4869;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21529561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7514;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21529601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21529624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9987;RSQ=0.9825;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21529668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5328;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21529706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0787;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21529758 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9122;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21529760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5441;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21529782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8542;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21529784 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0349;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 21529794 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5132;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21529878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8219;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21529901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.6012;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21529979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5761;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21530066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8115;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21530163 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6949;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21530259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0197;AVGPOST=0.9987;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21530266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21530267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.6499;AVGPOST=0.9871;RSQ=0.9776;ERATE=0.0007;THETA=0.0002;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 21530327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8850;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21530543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21530602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21530664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21530682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9333;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21530744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21530759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8712;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21530835 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21530906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21530912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1484;AVGPOST=0.9971;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 21530934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8610;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21530968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2478;AVGPOST=0.9957;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 21530976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4792;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21531072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21531163 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21531180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21531197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21531216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9305;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21531272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9058;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21531306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.9911;AVGPOST=0.9985;RSQ=0.9300;ERATE=0.0003;THETA=0.0003;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 21531310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6528;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21531343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9830;ERATE=0.0002;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21531418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21531442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8548;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21531721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7062;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21531725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4951;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21531826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0796;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 21531827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21531842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0435;AVGPOST=0.9964;RSQ=0.9684;ERATE=0.0004;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21531921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8967;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21531998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21532007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2363;AVGPOST=0.9942;RSQ=0.9875;ERATE=0.0006;THETA=0.0007;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 21532008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8608;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21532616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5472;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21532660 . AG A 11515 PASS INDEL;BAVGPOST=0.988;BRSQ=0.951;LDAF=0.1374;AVGPOST=0.9912;RSQ=0.9724;ERATE=0.0003;THETA=0.0015;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 21532685 . AG A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4550;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21532692 . G GA 12469 PASS INDEL;BAVGPOST=0.975;BRSQ=0.935;LDAF=0.2456;AVGPOST=0.9310;RSQ=0.8625;ERATE=0.0133;THETA=0.0006;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 21532694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21532871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7290;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21532883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6932;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21532906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9307;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21533010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4598;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21533101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0456;AVGPOST=0.9943;RSQ=0.9450;ERATE=0.0005;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21533208 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9756;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 21533212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8009;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 21533275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5469;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21533330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0061;AVGPOST=0.9957;RSQ=0.7268;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21533489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0117;AVGPOST=0.9935;RSQ=0.8070;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21533491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9415;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21533515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0039;AVGPOST=0.9972;RSQ=0.6917;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21533519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7566;AVGPOST=0.9958;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 21533532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21533627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6463;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21533851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0196;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21533969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9192;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21534048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9716;ERATE=0.0004;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21534143 . G GA 155 PASS INDEL;BAVGPOST=0.978;BRSQ=0.556;LDAF=0.0465;AVGPOST=0.9467;RSQ=0.5101;ERATE=0.0123;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21534172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0573;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21534179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9025;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21534190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7872;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21534286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21534306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21534337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8639;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21534383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21534471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9381;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21534523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.800;LDAF=0.0079;AVGPOST=0.9956;RSQ=0.7847;ERATE=0.0008;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21534529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4507;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21534557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21534610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21534653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21534687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6634;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21534784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21534791 . C CGG 673 PASS INDEL;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0236;AVGPOST=0.9954;RSQ=0.9243;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21534798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9634;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21534855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21534872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6864;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21534942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6999;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21534962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5719;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21535099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6635;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21535141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9516;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21535151 . TTTTTG T 1240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9249;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21535190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8921;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21535299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21535342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21535349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21535419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9671;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21535453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21535466 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21535504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0677;AVGPOST=0.9973;RSQ=0.9812;ERATE=0.0004;THETA=0.0009;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21535524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0609;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 21535589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21535594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21535618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21535651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5663;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21535664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9368;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21535673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21535773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7633;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0008;THETA=0.0004;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 21535816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0145;AVGPOST=0.9982;RSQ=0.9431;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21535828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21535840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21535876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7222;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21536051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21536283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0114;AVGPOST=0.9980;RSQ=0.9208;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21536296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21536467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9755;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 21536582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1652;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 21536592 . TATA T 1346 PASS INDEL;BAVGPOST=0.994;BRSQ=0.734;LDAF=0.0134;AVGPOST=0.9919;RSQ=0.7750;ERATE=0.0007;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21536620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3689;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21536706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21536761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0095;AVGPOST=0.9967;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21536817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21536853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21536893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21536975 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21536983 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21537046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21537162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8717;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21537297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5196;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21537303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21537435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9028;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21537522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21537583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21537846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21538174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0056;AVGPOST=0.9959;RSQ=0.7312;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21538467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21538473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7227;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21538568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21538702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21538772 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9342;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21538817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9980;RSQ=0.8843;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21538944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8220;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21538964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21539408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.945;LDAF=0.0295;AVGPOST=0.9962;RSQ=0.9516;ERATE=0.0003;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21539656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5532;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21539693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0688;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21539715 . ATTGTTCAG A 674 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21539715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21539816 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21539896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0689;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0004;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21539934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.802;LDAF=0.0508;AVGPOST=0.9815;RSQ=0.8747;ERATE=0.0004;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 21539985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0833;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 21540288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21540317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6442;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0691;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21540382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4123;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6217;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7682;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21540517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21540575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0687;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0009;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21540586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0718;AVGPOST=0.9979;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 21540587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6713;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8198;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9570;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21540698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21540708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21540746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7139;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540770 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21540846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0530;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 21540951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21540960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7095;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21540975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0540;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21541016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1899;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 21541302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7113;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21541338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1192;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 21541379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21541449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21541514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0111;AVGPOST=0.9972;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21541702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0687;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21541877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21541936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21541950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21541953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21542036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8952;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21542058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5272;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21542103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21542129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0278;AVGPOST=0.9976;RSQ=0.9663;ERATE=0.0004;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21542164 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21542186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21542325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9345;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21542342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0692;AVGPOST=0.9984;RSQ=0.9908;ERATE=0.0005;THETA=0.0011;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 21542410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21542482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0687;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21542542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7353;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21542556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21542571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7882;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21542572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6879;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21542601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8049;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21542681 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9985;RSQ=0.9636;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21542783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21542822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1898;AVGPOST=0.9976;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 21542918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7591;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21542931 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6802;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21543008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21543322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5048;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21543334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8409;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21543339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21543341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7011;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21543348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0308;AVGPOST=0.9920;RSQ=0.8999;ERATE=0.0006;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21543378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21543516 . C CT 801 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9293;ERATE=0.0005;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21543572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9296;ERATE=0.0003;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21543621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21543623 rs57056028 A AATTG 37586 PASS INDEL;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2039;AVGPOST=0.9814;RSQ=0.9616;ERATE=0.0028;THETA=0.0010;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 21543830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21543844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21543888 . CAGG C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.6956;ERATE=0.0007;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21543942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6086;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21544002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4326;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21544046 rs71835076 TTTC T 4268 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0355;AVGPOST=0.9983;RSQ=0.9804;ERATE=0.0005;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 21544053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5932;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21544083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3845;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21544130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0315;AVGPOST=0.9991;RSQ=0.9859;ERATE=0.0005;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21544193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.655;LDAF=0.0055;AVGPOST=0.9955;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21544309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7355;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21544329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21544411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0079;AVGPOST=0.9941;RSQ=0.7064;ERATE=0.0006;THETA=0.0026;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21544529 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0295;AVGPOST=0.9987;RSQ=0.9791;ERATE=0.0004;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21544537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6904;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21544833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8319;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21544898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9732;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21544907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0320;AVGPOST=0.9980;RSQ=0.9764;ERATE=0.0003;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21545127 . C CA 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21545180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0292;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0002;THETA=0.0014;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21545217 . TC T 930 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9597;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21545295 . CTATT C 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9472;ERATE=0.0006;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21545363 . TATTTA T 1158 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0123;AVGPOST=0.9982;RSQ=0.9358;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21545364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1375;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0004;THETA=0.0011;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 21545443 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.830;LDAF=0.0832;AVGPOST=0.9674;RSQ=0.8461;ERATE=0.0018;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 21545550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8591;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21545628 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21545903 . TG T 6338 PASS INDEL;BAVGPOST=0.990;BRSQ=0.939;LDAF=0.0809;AVGPOST=0.9903;RSQ=0.9583;ERATE=0.0003;THETA=0.0010;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21546037 . T TA 2734 PASS INDEL;BAVGPOST=0.990;BRSQ=0.938;LDAF=0.0811;AVGPOST=0.9887;RSQ=0.9512;ERATE=0.0004;THETA=0.0007;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21546040 . T TGCC 7700 PASS INDEL;BAVGPOST=0.987;BRSQ=0.920;LDAF=0.0795;AVGPOST=0.9896;RSQ=0.9533;ERATE=0.0004;THETA=0.0007;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21546042 . T TATG 10752 PASS INDEL;BAVGPOST=0.988;BRSQ=0.923;LDAF=0.0807;AVGPOST=0.9895;RSQ=0.9535;ERATE=0.0003;THETA=0.0010;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 21546047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546204 . TTC T 301 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7726;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21546236 . GT G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21546240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9431;ERATE=0.0002;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21546247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21546362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0618;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 21546574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0002;THETA=0.0016;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21546592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0002;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21546640 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0050;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21546674 . CCTAA C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21546775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9895;ERATE=0.0003;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21546833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0002;THETA=0.0013;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21546920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21546953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21546975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8024;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21547018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0609;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21547060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0609;AVGPOST=0.9989;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21547073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0088;AVGPOST=0.9974;RSQ=0.8901;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21547088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21547454 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21547618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21547630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9546;ERATE=0.0003;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21547641 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21547707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7034;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21547778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21548219 . G GT 567 PASS INDEL;BAVGPOST=0.987;BRSQ=0.656;LDAF=0.0266;AVGPOST=0.9750;RSQ=0.6180;ERATE=0.0055;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21548288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21548322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7234;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21548467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21548611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21548634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5538;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5449;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9714;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21548831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21548874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0246;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21549165 . AC A 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3494;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21549200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6208;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21549291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9994;RSQ=0.9897;ERATE=0.0003;THETA=0.0040;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21549456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8340;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21549677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21549812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0054;AVGPOST=0.9976;RSQ=0.8467;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21549871 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7900;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21549883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2287;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0006;THETA=0.0017;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 21549909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21549940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21550057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21550309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8224;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21550639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8592;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21550885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6310;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21550914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21551068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.946;LDAF=0.0349;AVGPOST=0.9954;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21551083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7366;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21551163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21551183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21551196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21551316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21551325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7054;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21551327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8458;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21551328 rs33986398 G GT 624 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.8974;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21551403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21551434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9276;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21551444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21551491 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21551580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2292;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 21551602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9998;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21551605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8021;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21551686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9991;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21551759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21551797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21551863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21551875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7461;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21551962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8783;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21552028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21552079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21552097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21552149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8902;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21552151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21552395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0107;AVGPOST=0.9966;RSQ=0.8973;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21552694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21552704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21552712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5361;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21552844 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4487;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21552887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9982;RSQ=0.9073;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21552891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7940;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21552974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.5469;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21553052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21553054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21553103 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21553239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8339;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21553252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21553441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7714;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21553477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21553505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2263;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 21553520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8460;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21553543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6966;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21553567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4108;AVGPOST=0.9920;RSQ=0.9874;ERATE=0.0014;THETA=0.0003;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 21553714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21553748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9027;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21553774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9985;RSQ=0.9770;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21553775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21553825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21553831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0069;AVGPOST=0.9969;RSQ=0.8472;ERATE=0.0004;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21553859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21553931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6549;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21554010 . AG A 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21554170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6976;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21554180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21554370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8135;ERATE=0.0018;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21554395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.3980;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21554431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7219;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21554503 rs55810788 TA T 24787 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2631;AVGPOST=0.9958;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 21554595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6298;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21554696 rs34635061 A AT 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9181;ERATE=0.0006;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21554707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0191;AVGPOST=0.9983;RSQ=0.9573;ERATE=0.0005;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21554759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6662;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21554776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7739;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21554825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555026 . T TC 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5927;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21555029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8445;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21555177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555182 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0068;AVGPOST=0.9950;RSQ=0.7130;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21555207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9242;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21555342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555349 . CA C 1203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0158;AVGPOST=0.9969;RSQ=0.9311;ERATE=0.0005;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21555352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7498;AVGPOST=0.9953;RSQ=0.9900;ERATE=0.0005;THETA=0.0004;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 21555380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4918;AVGPOST=0.9959;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 21555402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4925;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 21555458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4609;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9570;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21555678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2637;AVGPOST=0.9926;RSQ=0.9851;ERATE=0.0019;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 21555684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21555744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7396;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21555757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8260;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21556089 rs62934860 A ATTGT 73825 PASS INDEL;BAVGPOST=0.967;BRSQ=0.944;LDAF=0.4537;AVGPOST=0.9871;RSQ=0.9803;ERATE=0.0010;THETA=0.0004;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 21556118 . G GTTTT 22932 PASS INDEL;BAVGPOST=0.955;BRSQ=0.913;LDAF=0.4277;AVGPOST=0.9362;RSQ=0.8965;ERATE=0.0164;THETA=0.0002;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 21556121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21556141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21556143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6753;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21556151 . C CT 73 PASS INDEL;BAVGPOST=0.994;BRSQ=0.554;LDAF=0.0133;AVGPOST=0.9830;RSQ=0.4635;ERATE=0.0049;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21556200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9317;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21556214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6098;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21556274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0287;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21556373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21556414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3806;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21556631 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1258;AVGPOST=0.9985;RSQ=0.9943;ERATE=0.0004;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 21556728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5440;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21556832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0053;AVGPOST=0.9947;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21556848 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9685;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21556872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21556918 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7551;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0006;THETA=0.0007;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 21556952 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6958;ERATE=0.0014;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21557017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21557037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.6887;ERATE=0.0016;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21557250 . ATTG A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0028;AVGPOST=0.9953;RSQ=0.3570;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21557294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9182;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21557389 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7493;AVGPOST=0.9965;RSQ=0.9920;ERATE=0.0009;THETA=0.0003;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 21557427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21557700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0192;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21557732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9990;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21557733 . T TA 1263 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9215;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21557784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1251;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 21557811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0473;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 21557823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9992;RSQ=0.9806;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21557929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8301;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21557974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21558056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9966;RSQ=0.5984;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21558109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1248;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 21558196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5950;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21558223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21558228 . GC G 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5003;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21558284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21558306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21558412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9227;ERATE=0.0004;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21558472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9152;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21558509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.9858;AVGPOST=0.9978;RSQ=0.9422;ERATE=0.0004;THETA=0.0035;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 21558632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3985;AVGPOST=0.9975;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 21558697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5388;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21558704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21558713 rs10606313 CATATA C 25956 PASS INDEL;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1942;AVGPOST=0.9912;RSQ=0.9792;ERATE=0.0010;THETA=0.0007;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 21558766 . ATATAC A 12040 PASS INDEL;BAVGPOST=0.981;BRSQ=0.944;LDAF=0.1918;AVGPOST=0.9915;RSQ=0.9794;ERATE=0.0006;THETA=0.0004;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 21558772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21558903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8240;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21558941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21559086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21559165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0637;AVGPOST=0.9991;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21559299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8311;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21559346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3964;AVGPOST=0.9946;RSQ=0.9930;ERATE=0.0008;THETA=0.0005;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 21559359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0131;AVGPOST=0.9967;RSQ=0.8917;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21559377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5202;AVGPOST=0.9973;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 21559586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21559701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7165;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21559794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9542;ERATE=0.0003;THETA=0.0025;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21559821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0034;AVGPOST=0.9964;RSQ=0.5805;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21560049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.979;LDAF=0.4040;AVGPOST=0.9945;RSQ=0.9922;ERATE=0.0007;THETA=0.0005;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 21560091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1005;AVGPOST=0.9963;RSQ=0.9841;ERATE=0.0006;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 21560136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5918;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21560292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1624;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 21560446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7388;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21560510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0138;AVGPOST=0.9985;RSQ=0.9603;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21560665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21560764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4006;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21560859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21560913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8880;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21561000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21561076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8347;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21561207 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1435;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 21561244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3990;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 21561276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5202;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0008;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 21561340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3363;ERATE=0.0004;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21561478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4836;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21561609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3993;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 21561666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8648;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21561680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8377;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21561705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9044;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21561707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4384;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6660;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21561918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561979 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21561995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7206;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21562032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21562071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21562085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7437;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21562334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6828;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21562392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0313;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21562521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0322;AVGPOST=0.9984;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21562594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9413;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21562645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21562813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8380;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21562817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4414;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21562883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4626;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 21562905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3800;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21562991 . TACAC T 97 PASS INDEL;BAVGPOST=0.990;BRSQ=0.513;LDAF=0.0168;AVGPOST=0.9801;RSQ=0.5201;ERATE=0.0044;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21562997 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1571;AVGPOST=0.9970;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 21563106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2361;AVGPOST=0.9955;RSQ=0.9911;ERATE=0.0005;THETA=0.0005;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 21563228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6580;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21563257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6545;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21563337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21563450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21563472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21563514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21563591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4847;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21563690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.679;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7163;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21563703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2315;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 21563713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21563714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1089;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 21563720 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21563732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21563793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5404;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21564059 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6195;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21564193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21564203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21564265 . C CCATAT 11470 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0807;AVGPOST=0.9916;RSQ=0.9588;ERATE=0.0008;THETA=0.0001;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 21564296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9092;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21564367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4327;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21564700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0167;AVGPOST=0.9955;RSQ=0.8910;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21564725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3301;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21564735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7502;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0006;THETA=0.0001;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 21564960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1146;AVGPOST=0.9970;RSQ=0.9891;ERATE=0.0005;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 21565071 . AAAGG A 629 PASS INDEL;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0074;AVGPOST=0.9971;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21565076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3501;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21565103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6274;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21565143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21565178 . T TG 136 PASS INDEL;BAVGPOST=0.992;BRSQ=0.373;LDAF=0.0102;AVGPOST=0.9860;RSQ=0.4645;ERATE=0.0016;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21565178 . T TG 1338 PASS INDEL;BAVGPOST=0.993;BRSQ=0.699;LDAF=0.0100;AVGPOST=0.9953;RSQ=0.7949;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21565179 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21565301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1153;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0029;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 21565475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7309;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 21565515 rs74884807 T TA 44060 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6304;AVGPOST=0.9912;RSQ=0.9855;ERATE=0.0015;THETA=0.0004;AC=1377;AN=2184 GT:DS:GL:BD 0.63049453 1
1 21565541 . A AT 1729 PASS INDEL;BAVGPOST=0.771;BRSQ=0.445;LDAF=0.2177;AVGPOST=0.7903;RSQ=0.5454;ERATE=0.0257;THETA=0.0001;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 21565545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21565600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9619;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21565612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1127;AVGPOST=0.9976;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 21565613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0808;AVGPOST=0.9957;RSQ=0.9758;ERATE=0.0004;THETA=0.0023;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 21565827 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9559;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21565830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9198;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21565896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21565935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21565956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7280;AVGPOST=0.9959;RSQ=0.9918;ERATE=0.0005;THETA=0.0002;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 21565961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.8062;ERATE=0.0011;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21566018 . AT A 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6535;ERATE=0.0007;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21566024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9482;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21566038 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21566112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0098;AVGPOST=0.9979;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21566230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7582;ERATE=0.0004;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21566320 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3996;AVGPOST=0.9956;RSQ=0.9925;ERATE=0.0005;THETA=0.0002;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 21566353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21566371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6349;AVGPOST=0.9963;RSQ=0.9929;ERATE=0.0009;THETA=0.0001;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 21566395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5174;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21566442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1138;AVGPOST=0.9973;RSQ=0.9895;ERATE=0.0005;THETA=0.0002;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 21566445 . C CCA 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5158;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21566461 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.938;LDAF=0.3718;AVGPOST=0.9796;RSQ=0.9690;ERATE=0.0010;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 21566607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.939;LDAF=0.3726;AVGPOST=0.9800;RSQ=0.9696;ERATE=0.0005;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 21566608 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9368;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21566614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1109;AVGPOST=0.9988;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 21566681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6752;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21566740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0123;AVGPOST=0.9994;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21566825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21566970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7107;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21567147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6327;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0011;THETA=0.0003;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 21567205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21567259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8045;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21567261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21567400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21567414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1119;AVGPOST=0.9983;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 21567461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0096;AVGPOST=0.9972;RSQ=0.8937;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21567480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.7050;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21567593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21567619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8386;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21567625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21567648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21567653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0815;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 21567669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6340;AVGPOST=0.9951;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 21567679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4024;AVGPOST=0.9898;RSQ=0.9847;ERATE=0.0015;THETA=0.0006;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 21567685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21567775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7336;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0004;THETA=0.0016;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 21567803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21567827 . ATTC A 181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6017;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21568014 . G GA 6396 PASS INDEL;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.4163;AVGPOST=0.9247;RSQ=0.8847;ERATE=0.0128;THETA=0.0007;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 21568025 rs11399953 A AT 30253 PASS INDEL;BAVGPOST=0.981;BRSQ=0.964;LDAF=0.4015;AVGPOST=0.9766;RSQ=0.9634;ERATE=0.0040;THETA=0.0002;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 21568034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5623;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21568056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6878;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21568069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5077;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21568156 . GT G 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6448;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21568165 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21568272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1051;AVGPOST=0.9980;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 21568275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2318;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 21568328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8064;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21568332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2322;AVGPOST=0.9964;RSQ=0.9914;ERATE=0.0009;THETA=0.0015;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 21568368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21568425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21568430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6337;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 21568441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21568442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21568472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21568548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6339;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0001;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 21568602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4060;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 21568646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6854;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21568678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9475;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21568688 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21568700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.8801;AVGPOST=0.9936;RSQ=0.9784;ERATE=0.0008;THETA=0.0008;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 21568730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21568748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21568790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8238;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21568921 . A AT 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0039;AVGPOST=0.9956;RSQ=0.5582;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21569040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9252;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21569065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21569105 . CATT C 328 PASS INDEL;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0195;AVGPOST=0.9954;RSQ=0.9105;ERATE=0.0004;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21569114 . ATTAT A 2155 PASS INDEL;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0197;AVGPOST=0.9952;RSQ=0.9084;ERATE=0.0005;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21569115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8566;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0006;THETA=0.0005;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21569159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6713;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21569190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9732;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21569203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9989;RSQ=0.9439;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21569236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0031;AVGPOST=0.9952;RSQ=0.3676;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21569324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.809;LDAF=0.8154;AVGPOST=0.9286;RSQ=0.8324;ERATE=0.0090;THETA=0.0015;AC=1829;AN=2184 GT:DS:GL:BD 0.83745420 1
1 21569333 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.912;LDAF=0.8388;AVGPOST=0.9772;RSQ=0.9461;ERATE=0.0007;THETA=0.0003;AC=1845;AN=2184 GT:DS:GL:BD 0.84478021 1
1 21569368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.945;LDAF=0.4051;AVGPOST=0.9849;RSQ=0.9760;ERATE=0.0007;THETA=0.0019;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 21569386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.822;LDAF=0.7625;AVGPOST=0.9181;RSQ=0.8542;ERATE=0.0045;THETA=0.0007;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 21569421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.8545;AVGPOST=0.9935;RSQ=0.9795;ERATE=0.0009;THETA=0.0014;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 21569532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9812;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21569544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.858;LDAF=0.7761;AVGPOST=0.9084;RSQ=0.8180;ERATE=0.0097;THETA=0.0004;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 21569554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.938;LDAF=0.8555;AVGPOST=0.9955;RSQ=0.9863;ERATE=0.0008;THETA=0.0009;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21569656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8565;AVGPOST=0.9976;RSQ=0.9921;ERATE=0.0006;THETA=0.0007;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21569712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.827;LDAF=0.7886;AVGPOST=0.9171;RSQ=0.8230;ERATE=0.0232;THETA=0.0016;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 21569802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.942;LDAF=0.8500;AVGPOST=0.9874;RSQ=0.9641;ERATE=0.0016;THETA=0.0006;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 21569804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8570;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21569820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4100;AVGPOST=0.9941;RSQ=0.9902;ERATE=0.0005;THETA=0.0006;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 21569831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8569;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0014;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21569885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21569956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5954;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21569967 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8569;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21570070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4448;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21570107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8482;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21570222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8567;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21570368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.8725;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21570381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21570558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8686;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21570587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.931;LDAF=0.8471;AVGPOST=0.9846;RSQ=0.9603;ERATE=0.0012;THETA=0.0009;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 21570662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8564;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0005;THETA=0.0008;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21570750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0038;AVGPOST=0.9964;RSQ=0.6698;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21570765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7735;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21570779 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8573;AVGPOST=0.9950;RSQ=0.9865;ERATE=0.0008;THETA=0.0009;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21570855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8628;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 21570859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8568;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0005;THETA=0.0007;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21570920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0140;AVGPOST=0.9986;RSQ=0.9619;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21570998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4870;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21571030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8568;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21571054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8833;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21571082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.474;LDAF=0.0203;AVGPOST=0.9739;RSQ=0.4918;ERATE=0.0064;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21571122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21571145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8537;AVGPOST=0.9952;RSQ=0.9875;ERATE=0.0005;THETA=0.0024;AC=1865;AN=2184 GT:DS:GL:BD 0.85393775 1
1 21571218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.845;LDAF=0.8511;AVGPOST=0.9660;RSQ=0.9108;ERATE=0.0010;THETA=0.0003;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 21571331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.685;LDAF=0.0387;AVGPOST=0.9698;RSQ=0.7147;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21571339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.490;LDAF=0.0045;AVGPOST=0.9934;RSQ=0.4038;ERATE=0.0013;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21571344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9278;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21571349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6043;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21571351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8567;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21571392 . TG T 1313 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9572;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21571409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8631;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=1883;AN=2184 GT:DS:GL:BD 0.86217946 1
1 21571410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21571544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.933;LDAF=0.8155;AVGPOST=0.9793;RSQ=0.9552;ERATE=0.0013;THETA=0.0004;AC=1786;AN=2184 GT:DS:GL:BD 0.81776559 1
1 21571638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8071;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21571709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8571;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21571926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.824;LDAF=0.7528;AVGPOST=0.9054;RSQ=0.8011;ERATE=0.0371;THETA=0.0006;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 21572047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8963;AVGPOST=0.9973;RSQ=0.9901;ERATE=0.0003;THETA=0.0015;AC=1959;AN=2184 GT:DS:GL:BD 0.89697802 1
1 21572140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8571;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0011;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21572164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5634;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21572165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21572193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21572217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8572;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21572228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4222;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 21572233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8963;AVGPOST=0.9980;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=1958;AN=2184 GT:DS:GL:BD 0.89652014 1
1 21572261 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.8420;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0004;THETA=0.0020;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 21572294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8629;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 21572327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7232;ERATE=0.0004;THETA=0.0046;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21572342 rs75036493 GTCA G 35666 PASS INDEL;BAVGPOST=0.984;BRSQ=0.956;LDAF=0.8511;AVGPOST=0.9916;RSQ=0.9770;ERATE=0.0008;THETA=0.0007;AC=1865;AN=2184 GT:DS:GL:BD 0.85393775 1
1 21572395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4171;AVGPOST=0.9949;RSQ=0.9917;ERATE=0.0005;THETA=0.0015;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 21572443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.8557;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 21572498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5132;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21572512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0110;AVGPOST=0.9983;RSQ=0.9423;ERATE=0.0003;THETA=0.0033;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21572553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21572586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9784;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21572627 . AC A 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4970;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21572788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21572852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8569;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 21573032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9185;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21573054 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8574;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 21573074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21573127 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8425;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0003;THETA=0.0008;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 21573202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.924;LDAF=0.8491;AVGPOST=0.9861;RSQ=0.9647;ERATE=0.0003;THETA=0.0008;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 21573211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8870;AVGPOST=0.9975;RSQ=0.9897;ERATE=0.0005;THETA=0.0016;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 21573238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8703;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21573299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8571;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0004;THETA=0.0012;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8569;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0004;THETA=0.0009;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8574;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8576;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0005;THETA=0.0011;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8566;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0008;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.929;LDAF=0.8055;AVGPOST=0.9729;RSQ=0.9451;ERATE=0.0009;THETA=0.0007;AC=1765;AN=2184 GT:DS:GL:BD 0.80815017 1
1 21573475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.933;LDAF=0.8074;AVGPOST=0.9731;RSQ=0.9462;ERATE=0.0005;THETA=0.0008;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 21573476 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9985;RSQ=0.9519;ERATE=0.0005;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21573666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.8571;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 21573678 . G GT 193 PASS INDEL;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7305;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21573692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21573767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21573820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21573930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21573947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21574042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6398;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21574217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21574416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21574425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0249;AVGPOST=0.9983;RSQ=0.9758;ERATE=0.0005;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21574706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9986;RSQ=0.9673;ERATE=0.0003;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21574751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21574772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0008;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21574889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21574946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0494;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 21574990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0002;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21575002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0191;AVGPOST=0.9991;RSQ=0.9810;ERATE=0.0002;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21575054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21575068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6165;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21575190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21575317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21575479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0621;AVGPOST=0.9959;RSQ=0.9742;ERATE=0.0010;THETA=0.0010;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 21575496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21575538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4203;AVGPOST=0.9928;RSQ=0.9892;ERATE=0.0005;THETA=0.0007;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 21575570 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0280;AVGPOST=0.9984;RSQ=0.9791;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21575612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21575669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21575692 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8888;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21575800 . AC A 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5095;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21575829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6904;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21575974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4267;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21575984 . G GT 101 PASS INDEL;BAVGPOST=0.984;BRSQ=0.504;LDAF=0.0298;AVGPOST=0.9583;RSQ=0.4291;ERATE=0.0086;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21576088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0451;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21576112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0002;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21576163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5627;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21576174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7729;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21576187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21576284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8414;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21576290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5235;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21576322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21576441 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.9950;AVGPOST=0.9964;RSQ=0.7665;ERATE=0.0003;THETA=0.0005;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 21576484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21576608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21576640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21576675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8492;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21576731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0605;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 21576760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5952;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21576794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7383;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21576814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0134;AVGPOST=0.9980;RSQ=0.9497;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21576872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0002;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21576904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5864;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21576935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9354;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21576985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21577020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21577022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5745;AVGPOST=0.9916;RSQ=0.9856;ERATE=0.0006;THETA=0.0006;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 21577101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8812;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21577196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0256;AVGPOST=0.9989;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21577317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7632;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21577362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8488;ERATE=0.0009;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21577405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21577431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7533;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21577504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8653;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21577524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21577705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0591;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21577726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21577735 . AT A 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8235;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21577749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21577780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21577800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21577840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0089;AVGPOST=0.9976;RSQ=0.8876;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21577915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0591;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21577929 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21577969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21577990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21578072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5169;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21578186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.9985;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0002;THETA=0.0005;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 21578207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21578217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7913;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21578260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21578304 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0592;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21578362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8785;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21578447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0441;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 21578477 . T TG 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4318;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21578749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21578846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1859;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21578902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2896;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 21578955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.809;LDAF=0.0091;AVGPOST=0.9975;RSQ=0.8756;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21578956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4835;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21579088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21579113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1846;AVGPOST=0.9974;RSQ=0.9927;ERATE=0.0006;THETA=0.0001;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 21579208 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1899;AVGPOST=0.9948;RSQ=0.9874;ERATE=0.0007;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 21579259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8850;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21579304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21579310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21579331 rs71098643 T TG 2002 PASS INDEL;BAVGPOST=0.742;BRSQ=0.331;LDAF=0.7567;AVGPOST=0.7921;RSQ=0.5521;ERATE=0.0114;THETA=0.0008;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 21579530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.9927;AVGPOST=0.9962;RSQ=0.7797;ERATE=0.0008;THETA=0.0003;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 21579635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21579751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3034;AVGPOST=0.9895;RSQ=0.9814;ERATE=0.0018;THETA=0.0006;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 21579755 . CA C 1677 PASS INDEL;BAVGPOST=0.994;BRSQ=0.851;LDAF=0.0213;AVGPOST=0.9939;RSQ=0.8887;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21579896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0027;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 21579946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3008;AVGPOST=0.9957;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 21579961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7396;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21580128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7168;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21580137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21580141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1671;AVGPOST=0.9964;RSQ=0.9899;ERATE=0.0006;THETA=0.0019;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 21580160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21580256 . AAT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8001;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21580422 . AAAG A 6112 PASS INDEL;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.1746;AVGPOST=0.9899;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 21580525 . AGAAG A 21856 PASS INDEL;BAVGPOST=0.988;BRSQ=0.962;LDAF=0.1776;AVGPOST=0.9878;RSQ=0.9693;ERATE=0.0004;THETA=0.0005;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 21580527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21580563 . TA T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0036;AVGPOST=0.9951;RSQ=0.4460;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21580665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21580770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8409;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21580833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8635;AVGPOST=0.9961;RSQ=0.9881;ERATE=0.0005;THETA=0.0006;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 21580868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4795;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21580878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6715;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21580996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.8974;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21581109 . AAAC A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5584;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21581177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21581180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0403;AVGPOST=0.9979;RSQ=0.9808;ERATE=0.0004;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21581231 . ATC A 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5425;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21581268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8632;AVGPOST=0.9963;RSQ=0.9879;ERATE=0.0007;THETA=0.0001;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 21581273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9242;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21581310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21581425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21581529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0677;AVGPOST=0.9988;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21581564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21581589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21581623 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21581694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21581808 . AT A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4143;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21581926 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6609;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21581990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21582067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21582070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21582257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7884;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21582312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21582324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9657;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21582534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1966;AVGPOST=0.9913;RSQ=0.9781;ERATE=0.0010;THETA=0.0003;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 21582769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7627;ERATE=0.0003;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21582786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8631;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21582891 . C CT 284 PASS INDEL;BAVGPOST=0.991;BRSQ=0.646;LDAF=0.0215;AVGPOST=0.9780;RSQ=0.5982;ERATE=0.0037;THETA=0.0075;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21583017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21583032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8896;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21583076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0047;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21583251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.1008;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0004;THETA=0.0013;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 21583264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21583285 . GC G 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8497;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21583668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8970;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21583891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21583894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21584103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0004;THETA=0.0046;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21584162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21584228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21584285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21584332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21584345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7768;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21584504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21584576 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0981;AVGPOST=0.9979;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 21584586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9313;ERATE=0.0004;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21584599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21584611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21584622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5956;AVGPOST=0.9923;RSQ=0.9888;ERATE=0.0019;THETA=0.0020;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 21584708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0838;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0018;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 21584724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21584758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1572;AVGPOST=0.9905;RSQ=0.9724;ERATE=0.0007;THETA=0.0065;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 21584772 . G GA 9701 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0749;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0004;THETA=0.0114;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 21584821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21584958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0168;AVGPOST=0.9966;RSQ=0.9143;ERATE=0.0006;THETA=0.0181;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21584975 . AAG A 2045 PASS INDEL;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.1792;AVGPOST=0.9804;RSQ=0.9532;ERATE=0.0006;THETA=0.0012;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 21585135 rs34047396 AG A 21692 PASS INDEL;BAVGPOST=0.982;BRSQ=0.950;LDAF=0.1847;AVGPOST=0.9767;RSQ=0.9458;ERATE=0.0028;THETA=0.0103;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 21585136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0934;AVGPOST=0.9982;RSQ=0.9909;ERATE=0.0004;THETA=0.0034;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 21585173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0146;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.8341;AVGPOST=0.9907;RSQ=0.9746;ERATE=0.0029;THETA=0.0154;AC=1823;AN=2184 GT:DS:GL:BD 0.83470696 1
1 21585308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0004;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585400 . A AG 10669 PASS INDEL;BAVGPOST=0.925;BRSQ=0.877;LDAF=0.5229;AVGPOST=0.9070;RSQ=0.8747;ERATE=0.0111;THETA=0.0009;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 21585409 rs34370847 G GA 70606 PASS INDEL;BAVGPOST=0.948;BRSQ=0.917;LDAF=0.5604;AVGPOST=0.9505;RSQ=0.9364;ERATE=0.0008;THETA=0.0086;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 21585414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21585454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0218;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8056;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0004;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.927;LDAF=0.2824;AVGPOST=0.9587;RSQ=0.9247;ERATE=0.0337;THETA=0.0090;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 21585518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7468;ERATE=0.0015;THETA=0.0168;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21585537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8377;ERATE=0.0004;THETA=0.0066;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21585541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7192;ERATE=0.0004;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6612;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0214;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21585903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6854;ERATE=0.0004;THETA=0.0093;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21585939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2468;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0007;THETA=0.0050;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 21585996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0016;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21586014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0006;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21586017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21586041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21586083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21586283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0016;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21586320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21586395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0699;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 21586435 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21586464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21586480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9933;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21586847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1431;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0009;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 21586849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21586902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8634;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0015;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 21586976 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21587024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21587039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21587101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21587129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21587158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21587175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0512;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 21587307 . TG T 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6353;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21587335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21587380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21587403 . TG T 238 PASS INDEL;BAVGPOST=0.972;BRSQ=0.603;LDAF=0.0516;AVGPOST=0.9695;RSQ=0.7680;ERATE=0.0040;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 21587451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0482;AVGPOST=0.9957;RSQ=0.9613;ERATE=0.0004;THETA=0.0043;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21587455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.881;LDAF=0.0742;AVGPOST=0.9769;RSQ=0.8688;ERATE=0.0057;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21587456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.8954;ERATE=0.0005;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21587557 rs58922069 T TTTTTTC 1285 PASS INDEL;BAVGPOST=0.967;BRSQ=0.546;LDAF=0.0724;AVGPOST=0.9099;RSQ=0.4777;ERATE=0.0180;THETA=0.0012;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 21587623 . T TC 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8689;ERATE=0.0005;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21587634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.1163;AVGPOST=0.9910;RSQ=0.9680;ERATE=0.0006;THETA=0.0037;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 21587706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21587773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.488;LDAF=0.0088;AVGPOST=0.9891;RSQ=0.5058;ERATE=0.0014;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21587814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.884;LDAF=0.1103;AVGPOST=0.9864;RSQ=0.9518;ERATE=0.0005;THETA=0.0030;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 21587846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.531;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4349;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21587871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0180;AVGPOST=0.9989;RSQ=0.9724;ERATE=0.0004;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21587919 . AT A 33 PASS INDEL;BAVGPOST=0.975;BRSQ=0.375;LDAF=0.0435;AVGPOST=0.9378;RSQ=0.4016;ERATE=0.0090;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21587926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9661;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21587951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0289;AVGPOST=0.9987;RSQ=0.9799;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21588052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5442;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21588149 . GC G 810 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9256;ERATE=0.0006;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21588158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4856;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21588162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21588243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.942;LDAF=0.1095;AVGPOST=0.9933;RSQ=0.9720;ERATE=0.0010;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 21588247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5107;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21588306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0059;AVGPOST=0.9916;RSQ=0.5034;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21588378 rs112595865 G GA 62830 PASS INDEL;BAVGPOST=0.960;BRSQ=0.551;LDAF=0.9267;AVGPOST=0.9173;RSQ=0.5026;ERATE=0.0247;THETA=0.0013;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 21588436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0220;AVGPOST=0.9970;RSQ=0.9494;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21588593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4300;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21588647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21588709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6060;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21588750 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8411;ERATE=0.0006;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21588768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1097;AVGPOST=0.9981;RSQ=0.9913;ERATE=0.0006;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 21588779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21588785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.785;LDAF=0.2045;AVGPOST=0.8897;RSQ=0.7410;ERATE=0.0076;THETA=0.0134;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 21589489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.941;LDAF=0.1591;AVGPOST=0.9739;RSQ=0.9306;ERATE=0.0006;THETA=0.0025;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 21589831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9981;RSQ=0.8936;ERATE=0.0004;THETA=0.0086;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21589908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.914;LDAF=0.0146;AVGPOST=0.9960;RSQ=0.9014;ERATE=0.0003;THETA=0.0056;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21590025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.887;LDAF=0.0846;AVGPOST=0.9687;RSQ=0.8386;ERATE=0.0071;THETA=0.0026;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 21590087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21590350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0004;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21590409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9494;ERATE=0.0003;THETA=0.0062;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21590558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6849;ERATE=0.0005;THETA=0.0096;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21590572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21590581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7389;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21590648 . GC G 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4282;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21590666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9351;ERATE=0.0004;THETA=0.0061;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21590784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21590855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21590864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0308;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0067;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21590924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6352;ERATE=0.0018;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21590972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3486;AVGPOST=0.9904;RSQ=0.9827;ERATE=0.0005;THETA=0.0008;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 21590987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5957;ERATE=0.0011;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21590988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4750;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21591110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2894;AVGPOST=0.9926;RSQ=0.9872;ERATE=0.0005;THETA=0.0003;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 21591115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0281;AVGPOST=0.9985;RSQ=0.9795;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21591206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21591235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0456;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 21591345 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8767;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21591439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0467;AVGPOST=0.9984;RSQ=0.9864;ERATE=0.0004;THETA=0.0017;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 21591552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21591565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5774;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21591714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21591813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7054;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21592125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21592270 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21592380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21592494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3135;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 21592548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21592552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21592867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6878;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21592940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21593021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0716;AVGPOST=0.9968;RSQ=0.9813;ERATE=0.0004;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 21593411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3420;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 21593454 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21593509 . TAA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4562;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21593526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9111;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21593622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21593735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21593754 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21593909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2134;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 21593916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21594055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21594080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21594081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21594082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21594207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21594275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9571;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21594389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21594422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9567;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21594596 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8289;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21594672 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21594734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21594868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595002 . TG T 4531 PASS INDEL;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0262;AVGPOST=0.9990;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21595008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0027;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21595043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595071 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595151 . G GC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21595334 . GT G 535 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21595374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21595426 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8632;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21595615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8472;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21595619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8794;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21595627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21595648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21595672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9309;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21595739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21595766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7456;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21595790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8975;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21595924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.4890;ERATE=0.0010;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21596006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0136;AVGPOST=0.9985;RSQ=0.9600;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21596053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5348;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21596109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.948;LDAF=0.4212;AVGPOST=0.9784;RSQ=0.9636;ERATE=0.0009;THETA=0.0004;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 21596154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4186;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21596197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6255;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21596200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8064;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21596203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21596289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0260;AVGPOST=0.9988;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21596317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21596426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0113;AVGPOST=0.9962;RSQ=0.8775;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21596445 . CAGA C 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8902;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21596545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6785;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21596620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3902;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21596669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0750;AVGPOST=0.9966;RSQ=0.9799;ERATE=0.0004;THETA=0.0008;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 21597181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21597183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.813;LDAF=0.0197;AVGPOST=0.9870;RSQ=0.7400;ERATE=0.0016;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21597337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6443;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21597600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21597606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21597617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21597769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21597930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21597968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.4138;AVGPOST=0.9874;RSQ=0.9790;ERATE=0.0006;THETA=0.0004;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 21598059 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21598162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7834;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21598572 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9429;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21598646 . TC T 603 PASS INDEL;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0169;AVGPOST=0.9959;RSQ=0.9055;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21598795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.824;LDAF=0.0178;AVGPOST=0.9938;RSQ=0.8716;ERATE=0.0008;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21598796 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6487;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21598906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21598983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21599025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5615;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21599038 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21599085 . AAG A 40 PASS INDEL;BAVGPOST=0.994;BRSQ=0.719;LDAF=0.0157;AVGPOST=0.9836;RSQ=0.5813;ERATE=0.0065;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21599247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21599278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0004;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21599332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21599395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21599442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21599472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9298;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21599553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9393;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21599591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0343;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21599624 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21599667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9613;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21599780 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21599818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21599862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0318;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21599863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21600012 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9851;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21600153 . C CA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21600183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0397;AVGPOST=0.9984;RSQ=0.9829;ERATE=0.0004;THETA=0.0048;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21600226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21600279 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0335;AVGPOST=0.9992;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21600395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21600419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9231;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 21600475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1841;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 21600522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21600613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7103;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21600624 . AAAG A 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5229;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21600858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21600917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1625;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21600994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9983;RSQ=0.9845;ERATE=0.0003;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21601041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9643;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 21601065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0416;AVGPOST=0.9990;RSQ=0.9911;ERATE=0.0004;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 21601072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 21601086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8548;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21601088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21601164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9309;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 21601237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0337;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21601277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21601307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21601308 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21601325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8816;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21601410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21601486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21601692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21601735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21601755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5161;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21601892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21601900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0317;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21601904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21601917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.9657;AVGPOST=0.9979;RSQ=0.9779;ERATE=0.0004;THETA=0.0002;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 21601969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21601990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4777;AVGPOST=0.9978;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 21602004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.879;LDAF=0.0244;AVGPOST=0.9947;RSQ=0.9132;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21602018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9141;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21602127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9392;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21602304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0242;AVGPOST=0.9979;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21602365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9131;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21602373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21602433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21602452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21602497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1623;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21602674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21602708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7745;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21602725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.8039;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21602795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9027;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21602901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21602936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9308;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 21602965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9750;ERATE=0.0004;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21603012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4785;AVGPOST=0.9973;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 21603030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8430;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21603078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0103;AVGPOST=0.9980;RSQ=0.9288;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21603108 . AAC A 160 PASS INDEL;BAVGPOST=0.991;BRSQ=0.646;LDAF=0.0156;AVGPOST=0.9840;RSQ=0.5966;ERATE=0.0042;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21603340 . CAT C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5146;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21603352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6356;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21603359 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21603412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1856;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0015;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21603428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 21603590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21603629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9639;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0004;THETA=0.0006;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 21603800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21603893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21604040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21604086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21604103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2231;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 21604147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21604274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0016;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21604372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604435 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21604578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21604702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4234;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21604942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0274;AVGPOST=0.9980;RSQ=0.9743;ERATE=0.0004;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21604989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9679;AVGPOST=0.9969;RSQ=0.9630;ERATE=0.0003;THETA=0.0005;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 21605048 . TATATAA T 406 PASS INDEL;BAVGPOST=0.994;BRSQ=0.820;LDAF=0.0176;AVGPOST=0.9925;RSQ=0.8412;ERATE=0.0008;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21605066 rs71792191 TATAA T 2289 PASS INDEL;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0194;AVGPOST=0.9917;RSQ=0.8245;ERATE=0.0014;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21605068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8659;AVGPOST=0.9955;RSQ=0.9871;ERATE=0.0015;THETA=0.0006;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 21605111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9493;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21605244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21605276 . GA G 8656 PASS INDEL;BAVGPOST=0.916;BRSQ=0.810;LDAF=0.7488;AVGPOST=0.8506;RSQ=0.7406;ERATE=0.0333;THETA=0.0005;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 21605317 rs5777147 AG A 69301 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8646;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0004;THETA=0.0008;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 21605319 . GT G 12665 PASS INDEL;BAVGPOST=0.942;BRSQ=0.861;LDAF=0.7823;AVGPOST=0.8842;RSQ=0.7906;ERATE=0.0245;THETA=0.0003;AC=1774;AN=2184 GT:DS:GL:BD 0.81227106 1
1 21605322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6854;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21605335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21605346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4985;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21605376 . CT C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4356;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21605457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6190;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21605532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21605718 rs10707323 GA G 36671 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4295;AVGPOST=0.9917;RSQ=0.9863;ERATE=0.0008;THETA=0.0002;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 21605815 . AC A 34129 PASS INDEL;BAVGPOST=0.996;BRSQ=0.570;LDAF=0.9905;AVGPOST=0.9866;RSQ=0.4536;ERATE=0.0023;THETA=0.0006;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 21605819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21606023 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9982;RSQ=0.9586;ERATE=0.0003;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21606061 . GATATTA G 374 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21606128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9124;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0005;THETA=0.0007;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 21606197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21606303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9698;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 21606365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7041;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21606390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8855;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0004;THETA=0.0009;AC=1935;AN=2184 GT:DS:GL:BD 0.88598901 1
1 21606876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21606912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0088;AVGPOST=0.9953;RSQ=0.8112;ERATE=0.0007;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21606977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3203;ERATE=0.0008;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21607019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9978;RSQ=0.9206;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21607035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3809;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21607052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7078;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21607087 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7306;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21607202 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.896;LDAF=0.0957;AVGPOST=0.9776;RSQ=0.9041;ERATE=0.0020;THETA=0.0007;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 21607294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0032;AVGPOST=0.9953;RSQ=0.3589;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21607376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21607446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0238;AVGPOST=0.9991;RSQ=0.9846;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21607495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7551;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21607664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0055;AVGPOST=0.9993;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21607725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21607946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21608077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21608180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21608261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21608358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21608462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21608491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8561;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21608519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9026;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21608556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21608640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7917;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21608704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5161;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21608776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9352;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21608860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21608884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0236;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0003;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21608923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8075;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21608966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.361;LDAF=0.0045;AVGPOST=0.9931;RSQ=0.3813;ERATE=0.0013;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21609004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0165;AVGPOST=0.9971;RSQ=0.9297;ERATE=0.0005;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21609017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6056;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21609018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5718;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21609021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8643;AVGPOST=0.9937;RSQ=0.9846;ERATE=0.0009;THETA=0.0005;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 21609057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0127;AVGPOST=0.9971;RSQ=0.9130;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21609150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6419;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21609165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3736;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21609221 rs58119626 ACT A 2769 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0283;AVGPOST=0.9963;RSQ=0.9596;ERATE=0.0004;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21609266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0683;AVGPOST=0.9991;RSQ=0.9946;ERATE=0.0004;THETA=0.0032;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 21609471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21609541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21609544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1643;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 21609552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1633;AVGPOST=0.9974;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 21609560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21609626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3918;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 21609641 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2085;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 21609692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0459;AVGPOST=0.9976;RSQ=0.9820;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21609761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21609809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0103;AVGPOST=0.9982;RSQ=0.9217;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21609828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7642;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21609854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0004;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21610082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21610309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6969;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21610431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21610437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21610516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0213;AVGPOST=0.9969;RSQ=0.9446;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21610642 . GAAAATT G 7856 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0306;AVGPOST=0.9984;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21610644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9396;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21610661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21610663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2044;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 21610713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21610723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1626;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 21610873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2025;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0005;THETA=0.0001;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 21610880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21610907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21611073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1741;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 21611247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21611332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9604;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21611365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1638;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0005;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 21611368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2178;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 21611438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4991;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611494 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0441;AVGPOST=0.9991;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21611590 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611743 . G GT 186 PASS INDEL;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8024;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21611811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3215;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 21611813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21611830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21611862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4680;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21611867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7735;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21611935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1460;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 21612160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0145;AVGPOST=0.9986;RSQ=0.9642;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21612169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1457;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 21612365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9692;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21612373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0549;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21612426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21612432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21612440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5706;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21612524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21612565 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0549;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21612581 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21612668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9988;RSQ=0.9530;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21612681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8331;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21612820 . A AG 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8057;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21612861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6868;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21612903 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21612922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7467;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21612984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21613037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21613147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21613174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9365;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21613278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21613279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5913;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21613286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21613306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8610;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21613449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21613668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21613670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8828;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21613673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5849;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21613760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21613774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6474;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21613787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8671;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21613815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21613890 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21614038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21614105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21614125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21614142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0435;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21614186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21614246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2452;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0009;THETA=0.0002;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 21614247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1076;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 21614281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8326;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21614288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21614334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21614425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8951;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21614460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21614652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5533;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21614694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7527;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21614699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5362;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21614760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0913;AVGPOST=0.9979;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 21614764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5456;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21614776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0040;AVGPOST=0.9969;RSQ=0.6758;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21615091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9070;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21615099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0146;AVGPOST=0.9986;RSQ=0.9584;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21615244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0976;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 21615302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21615359 . TCAAA T 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3147;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21615396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21615448 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7310;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21615501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1503;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 21615582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4394;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21615632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21615729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8749;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21615824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8125;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21615839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7387;AVGPOST=0.9918;RSQ=0.9831;ERATE=0.0013;THETA=0.0005;AC=1614;AN=2184 GT:DS:GL:BD 0.73901099 1
1 21615882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21615957 . G GA 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6752;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21616166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21616178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21616206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21616228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21616421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21616565 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21616795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21616817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8560;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21616829 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21616836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21617099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9573;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21617111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21617132 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1522;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21617143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9828;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21617206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8066;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21617382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7841;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21617413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3729;AVGPOST=0.9866;RSQ=0.9823;ERATE=0.0039;THETA=0.0005;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 21617471 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21617502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8910;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21617529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21617583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6991;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21617610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21617634 . C CA 5253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0304;AVGPOST=0.9994;RSQ=0.9904;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21617644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21617742 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21617778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21617801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21617883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6589;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21617885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8766;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21618035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.9941;AVGPOST=0.9993;RSQ=0.9549;ERATE=0.0003;THETA=0.0003;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 21618076 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9187;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21618107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21618125 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21618297 . TG T 269 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8408;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21618331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21618400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8548;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21618459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21618545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8423;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21618609 . TG T 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7003;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21618614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21618803 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7528;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21618833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21618937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21619056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21619105 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21619126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21619305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6598;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21619417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21619453 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1896;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 21619464 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7600;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21619465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1319;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21619543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5815;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21619614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21619628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21619683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6775;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21619750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21619766 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21619795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0340;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21619821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21619898 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21619942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21619975 . G GT 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4366;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620050 rs35429868 GT G 39586 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4840;AVGPOST=0.9899;RSQ=0.9855;ERATE=0.0023;THETA=0.0002;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 21620103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620363 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0137;AVGPOST=0.9980;RSQ=0.9447;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21620427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4557;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21620469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9222;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21620503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7845;AVGPOST=0.9894;RSQ=0.9776;ERATE=0.0016;THETA=0.0002;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 21620528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21620548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7542;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21620674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8814;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21620679 . GC G 3098 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0310;AVGPOST=0.9967;RSQ=0.9579;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 21620763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0281;AVGPOST=0.9987;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21620930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21620942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21620949 . TTAGA T 985 PASS INDEL;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0079;AVGPOST=0.9991;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21620963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21620970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.9397;AVGPOST=0.9968;RSQ=0.9770;ERATE=0.0004;THETA=0.0003;AC=2051;AN=2184 GT:DS:GL:BD 0.93910259 1
1 21621044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21621059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5797;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21621095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0330;AVGPOST=0.9990;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21621257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4507;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0008;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 21621305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4926;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21621332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8293;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21621418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21621419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21621579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6335;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21621584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21621634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21621645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4459;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 21621651 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21621655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4460;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 21621720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9803;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21621722 . CT C 1196 PASS INDEL;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.8837;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21621917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21622089 rs5777271 C CG 55327 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4754;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0006;THETA=0.0004;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 21622105 . G GT 17736 PASS INDEL;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4749;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0007;THETA=0.0003;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 21622106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4443;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 21622125 . A AGC 224 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3871;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21622194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0199;AVGPOST=0.9977;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21622232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21622452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9028;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21622554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21622676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0659;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 21622713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21622763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.4797;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21622768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21622804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21622859 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21622933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6181;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21622961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4744;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 21623005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5999;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21623073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 21623100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4643;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 21623170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21623185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8262;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21623251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4647;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 21623268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4327;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 21623275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4989;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 21623315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4328;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 21623420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623433 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623435 . G GT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21623493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9272;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21623609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4647;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0004;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 21623635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7879;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21623679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0220;AVGPOST=0.9990;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21623688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21623880 . G GTT 1854 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8920;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21623881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4662;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0006;THETA=0.0004;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 21623964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6413;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 21624253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21624310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0322;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21624356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21624393 MERGED_DEL_2_4797 CCTGGGAATTTGTCAGAAAGGGAAAATCTTGGGCCTCACTCCAGACCTATTGAATCAGAATCTCGAGAGTGGAGCCCATCAAAGTGTTTCAAGCCCCAAAAGTGATTATGATATGCTAAAATGTGGGGCCCTCTGCCCAAACAGGGTAGGATGTGAGTTAAATTGTCAGGAAGACAGATAAGCAAGGACT C . . SV;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0006;CIEND=-14;36;CIPOS=-23;17;END=116836073;HOMLEN=5;HOMSEQ=CTGGG;SOURCE=EMBLdelly_116831424_11683607 GT:DS:GL:BD 0.00274725 0
1 21624442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7724;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21624491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21624518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21624677 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9391;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21624791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21624997 . CA C 219 PASS INDEL;BAVGPOST=0.972;BRSQ=0.504;LDAF=0.0354;AVGPOST=0.9728;RSQ=0.7033;ERATE=0.0017;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21625130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0945;AVGPOST=0.9948;RSQ=0.9786;ERATE=0.0005;THETA=0.0008;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 21625139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21625232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21625320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21625348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21625624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0067;AVGPOST=0.9969;RSQ=0.8187;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21625633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21625745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7749;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21625754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21625806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21625828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21625845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21625896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21625922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0903;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 21626123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21626126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8412;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 21626221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9060;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21626322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2769;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 21626389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21626526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21626628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9988;RSQ=0.9795;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21626640 rs10654148 C CA 947 PASS INDEL;BAVGPOST=0.519;BRSQ=0.150;LDAF=0.4464;AVGPOST=0.6552;RSQ=0.3709;ERATE=0.0387;THETA=0.0017;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 21626782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8001;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21626845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21626888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8797;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21626925 . CATT C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5159;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21626964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1257;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 21627024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21627063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1255;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 21627114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0846;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 21627166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7746;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21627201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21627403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7326;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21627432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9234;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21627562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.8993;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21627900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7595;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21627927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21628009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21628136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21628176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21628212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0153;AVGPOST=0.9991;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21628240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21628298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21628319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8974;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21628338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7841;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21628409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.951;LDAF=0.0604;AVGPOST=0.9969;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21628487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21628611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21628620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2830;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 21628637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6258;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21628779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21628785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21628864 . G GA 3130 PASS INDEL;BAVGPOST=0.980;BRSQ=0.773;LDAF=0.0411;AVGPOST=0.9826;RSQ=0.8460;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21628872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6973;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21628894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21628962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8779;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21628989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.6304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21629031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21629080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21629159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21629244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21629431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4042;AVGPOST=0.9942;RSQ=0.9907;ERATE=0.0007;THETA=0.0007;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 21629478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21629498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21629517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21629550 . C CAAT 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5020;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21629637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9220;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21629643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21629758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21629817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9447;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21629888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21629909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7830;AVGPOST=0.9966;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 21629959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.6151;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21630051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.7562;AVGPOST=0.9714;RSQ=0.9477;ERATE=0.0036;THETA=0.0002;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 21630230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21630272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21630276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1726;AVGPOST=0.9965;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 21630394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6876;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21630425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9621;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21630513 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9055;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21630623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0002;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21630661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8149;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21630920 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21630924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21630999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8333;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21631205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.942;LDAF=0.3311;AVGPOST=0.9863;RSQ=0.9773;ERATE=0.0006;THETA=0.0002;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 21631370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7704;AVGPOST=0.9794;RSQ=0.9589;ERATE=0.0017;THETA=0.0006;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 21631457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21631519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8820;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21631618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21631754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0158;AVGPOST=0.9950;RSQ=0.8789;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21631845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21631902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.849;LDAF=0.6806;AVGPOST=0.8580;RSQ=0.7689;ERATE=0.0300;THETA=0.0003;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 21632017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.903;LDAF=0.7751;AVGPOST=0.9840;RSQ=0.9662;ERATE=0.0008;THETA=0.0003;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 21632049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21632551 . C CCATCT 2265 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9718;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21632575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1624;AVGPOST=0.9834;RSQ=0.9533;ERATE=0.0055;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 21632647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7140;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21632663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4802;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21632675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21632784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5575;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21632802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21632814 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21632826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1689;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 21632836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21632915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.4382;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21632926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21632983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8809;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21633063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8917;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21633162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21633342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0120;AVGPOST=0.9943;RSQ=0.8222;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21633372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.7854;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21633439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.875;LDAF=0.9698;AVGPOST=0.9917;RSQ=0.8818;ERATE=0.0006;THETA=0.0003;AC=2123;AN=2184 GT:DS:GL:BD 0.97206962 1
1 21633523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2145;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21633638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8772;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21633798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2145;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21633970 . A AT 221 PASS INDEL;BAVGPOST=0.996;BRSQ=0.831;LDAF=0.0241;AVGPOST=0.9779;RSQ=0.6409;ERATE=0.0084;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21634031 . AG A 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21634034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21634092 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21634094 . AT A 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4588;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21634282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1690;AVGPOST=0.9968;RSQ=0.9903;ERATE=0.0007;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 21634454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6615;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21634467 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21634530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21634559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8806;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21634563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9983;RSQ=0.9475;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21634594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21634664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0203;AVGPOST=0.9943;RSQ=0.9054;ERATE=0.0011;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21634711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1641;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 21634776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.939;LDAF=0.9414;AVGPOST=0.9921;RSQ=0.9495;ERATE=0.0004;THETA=0.0002;AC=2058;AN=2184 GT:DS:GL:BD 0.94230771 1
1 21634828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7045;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21634938 rs111505587 A AGT 4901 PASS INDEL;BAVGPOST=0.966;BRSQ=0.744;LDAF=0.0871;AVGPOST=0.9267;RSQ=0.6433;ERATE=0.0274;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21634977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7530;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 21634986 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 21634989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0096;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21635047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7229;AVGPOST=0.9863;RSQ=0.9740;ERATE=0.0033;THETA=0.0002;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 21635090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9274;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21635111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0113;AVGPOST=0.9962;RSQ=0.8527;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21635155 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5676;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21635229 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7005;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21635230 . CG C 757 PASS INDEL;BAVGPOST=0.780;BRSQ=0.331;LDAF=0.2448;AVGPOST=0.7220;RSQ=0.3747;ERATE=0.0591;THETA=0.0002;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 21635261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21635329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1641;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 21635376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7514;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21635383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4768;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 21635439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.9072;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21635459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1329;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21635511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21635541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7303;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0005;THETA=0.0007;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 21635578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9855;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21635666 . TAAAC T 313 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21635738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9821;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21635819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21635872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7265;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21635900 . ACAGT A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21636048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21636130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0080;AVGPOST=0.9963;RSQ=0.8131;ERATE=0.0023;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21636133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9099;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21636151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6860;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21636186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9956;RSQ=0.3997;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21636195 . GTC G 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21636219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0185;AVGPOST=0.9985;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21636229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21636244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21636248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21636309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5548;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21636373 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21636382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21636410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.915;LDAF=0.3553;AVGPOST=0.9462;RSQ=0.9140;ERATE=0.0080;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 21636533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.914;LDAF=0.3573;AVGPOST=0.9451;RSQ=0.9103;ERATE=0.0120;THETA=0.0005;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 21636534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0827;AVGPOST=0.9960;RSQ=0.9817;ERATE=0.0012;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 21636561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21636577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21636721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21636734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1256;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 21636745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21636752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21636761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9708;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21636863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21636887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21637020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21637121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9565;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21637265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21637283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2905;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 21637286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2901;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 21637322 MERGED_DEL_2_4841 GGCACAGACATTCTGATTAATCTCTTGATCCCCTGGCTTTCTCATATCCCCTATACCAGTCCATTTTATATCCTTGAGGCAAGGTTAACTTCCTACACTACAATTCTGCTTCTGTTTTTCTTTTTCTTTTTGAAACAGGATTTTGCTGTGCCACCCAGGCTGGAGTCCAGAGGCATGATCTCTGCTCACT G . . SV;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0707;AVGPOST=0.9944;RSQ=0.9691;ERATE=0.0009;THETA=0.0005;CIEND=-17;33;CIPOS=-18;19;END=120013628;HOMLEN=0;HOMSEQ;SOURCE=GenomeStrip_120012789_120013582;SV GT:DS:GL:BD 0.06868132 0
1 21637347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.3125;AVGPOST=0.9917;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 21637349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7153;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21637422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21637455 . CT C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637458 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5970;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21637482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6462;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21637560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3525;AVGPOST=0.9849;RSQ=0.9794;ERATE=0.0004;THETA=0.0003;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 21637599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.3469;AVGPOST=0.9837;RSQ=0.9773;ERATE=0.0008;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 21637661 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.933;LDAF=0.0290;AVGPOST=0.9957;RSQ=0.9413;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 21637820 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1247;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21637873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4668;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21637940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21638041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21638044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0219;AVGPOST=0.9982;RSQ=0.9738;ERATE=0.0003;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21638094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21638178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21638291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21638300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3807;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 21638372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0951;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 21638447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21638478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0690;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 21638523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7194;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21638538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0048;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21638744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3095;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 21638861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2676;AVGPOST=0.9965;RSQ=0.9937;ERATE=0.0005;THETA=0.0001;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 21638915 . G GTGCTCTTTTAGTTT 9725 PASS INDEL;BAVGPOST=0.956;BRSQ=0.759;LDAF=0.1010;AVGPOST=0.9812;RSQ=0.9245;ERATE=0.0007;THETA=0.0006;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 21639007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21639066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0320;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21639074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3168;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0008;THETA=0.0027;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 21639104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0376;AVGPOST=0.9977;RSQ=0.9781;ERATE=0.0004;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 21639144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21639239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3867;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 21639249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8040;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21639251 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3066;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 21639295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21639298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21639319 . T TC 5675 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0574;AVGPOST=0.9981;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 21639400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3269;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 21639420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7208;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 21639495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0048;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21639599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21639626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7181;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21639638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9775;ERATE=0.0003;THETA=0.0023;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21639639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0005;THETA=0.0089;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21640263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.889;LDAF=0.5338;AVGPOST=0.9160;RSQ=0.8947;ERATE=0.0010;THETA=0.0120;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 21640285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6784;ERATE=0.0006;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21640286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.761;LDAF=0.0070;AVGPOST=0.9957;RSQ=0.7762;ERATE=0.0006;THETA=0.0061;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21640287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0117;AVGPOST=0.9972;RSQ=0.9191;ERATE=0.0004;THETA=0.0076;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21640295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6628;ERATE=0.0005;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21640300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.8420;ERATE=0.0005;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21640316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.788;LDAF=0.1444;AVGPOST=0.9433;RSQ=0.8106;ERATE=0.0113;THETA=0.0073;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 21640330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5542;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21640339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.653;LDAF=0.1030;AVGPOST=0.9340;RSQ=0.7060;ERATE=0.0124;THETA=0.0217;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 21640343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7833;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21640345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0054;AVGPOST=0.9931;RSQ=0.5048;ERATE=0.0011;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21641554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8334;ERATE=0.0006;THETA=0.0154;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21641936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.564;LDAF=0.1230;AVGPOST=0.9118;RSQ=0.6638;ERATE=0.0205;THETA=0.0233;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 21642106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.557;LDAF=0.9310;AVGPOST=0.9439;RSQ=0.7035;ERATE=0.0014;THETA=0.0062;AC=2057;AN=2184 GT:DS:GL:BD 0.94184983 1
1 21642112 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0005;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21642183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0115;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21642289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.872;BRSQ=0.673;LDAF=0.2239;AVGPOST=0.8775;RSQ=0.7450;ERATE=0.0120;THETA=0.0079;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 21642613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.706;LDAF=0.6412;AVGPOST=0.8414;RSQ=0.7407;ERATE=0.0152;THETA=0.0086;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 21642647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.768;BRSQ=0.453;LDAF=0.5801;AVGPOST=0.7829;RSQ=0.5344;ERATE=0.0412;THETA=0.0124;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 21642708 . AG A 191 PASS INDEL;BAVGPOST=0.962;BRSQ=0.374;LDAF=0.0328;AVGPOST=0.9571;RSQ=0.4502;ERATE=0.0051;THETA=0.0219;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21642869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.658;LDAF=0.0987;AVGPOST=0.9417;RSQ=0.7369;ERATE=0.0037;THETA=0.0126;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 21643090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.669;LDAF=0.1155;AVGPOST=0.9253;RSQ=0.6965;ERATE=0.0097;THETA=0.0120;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 21643101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.783;LDAF=0.8534;AVGPOST=0.9389;RSQ=0.8448;ERATE=0.0011;THETA=0.0054;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 21643108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.564;LDAF=0.0341;AVGPOST=0.9667;RSQ=0.6052;ERATE=0.0019;THETA=0.0161;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21643475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.608;LDAF=0.0729;AVGPOST=0.9461;RSQ=0.6853;ERATE=0.0071;THETA=0.0106;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21643487 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.872;BRSQ=0.734;LDAF=0.2288;AVGPOST=0.8936;RSQ=0.8142;ERATE=0.0075;THETA=0.0079;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 21643497 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.740;LDAF=0.1009;AVGPOST=0.9572;RSQ=0.8334;ERATE=0.0006;THETA=0.0218;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 21643502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0067;AVGPOST=0.9955;RSQ=0.8072;ERATE=0.0005;THETA=0.0039;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21643534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.599;LDAF=0.0751;AVGPOST=0.9343;RSQ=0.6294;ERATE=0.0075;THETA=0.0112;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21643551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.881;LDAF=0.2341;AVGPOST=0.9541;RSQ=0.9050;ERATE=0.0011;THETA=0.0051;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 21643556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21643567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21643585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.898;LDAF=0.6183;AVGPOST=0.9404;RSQ=0.9198;ERATE=0.0012;THETA=0.0237;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 21643590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.898;LDAF=0.4295;AVGPOST=0.9534;RSQ=0.9240;ERATE=0.0014;THETA=0.0074;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 21643613 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0100;AVGPOST=0.9950;RSQ=0.8303;ERATE=0.0004;THETA=0.0053;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21643649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.933;LDAF=0.2659;AVGPOST=0.9646;RSQ=0.9419;ERATE=0.0010;THETA=0.0050;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 21643666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0005;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21643671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.653;LDAF=0.0398;AVGPOST=0.9707;RSQ=0.7278;ERATE=0.0033;THETA=0.0197;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21643682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.913;LDAF=0.4858;AVGPOST=0.9493;RSQ=0.9231;ERATE=0.0033;THETA=0.0068;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 21643703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.826;LDAF=0.0178;AVGPOST=0.9918;RSQ=0.8028;ERATE=0.0022;THETA=0.0098;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21643717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5439;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21643741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.624;LDAF=0.0129;AVGPOST=0.9885;RSQ=0.6509;ERATE=0.0028;THETA=0.0061;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21643743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.883;LDAF=0.4582;AVGPOST=0.9464;RSQ=0.9003;ERATE=0.0092;THETA=0.0216;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 21643763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.881;BRSQ=0.684;LDAF=0.8430;AVGPOST=0.9140;RSQ=0.7770;ERATE=0.0044;THETA=0.0011;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 21643960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.659;LDAF=0.0074;AVGPOST=0.9923;RSQ=0.5639;ERATE=0.0007;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21643978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.542;LDAF=0.0067;AVGPOST=0.9935;RSQ=0.5708;ERATE=0.0008;THETA=0.0139;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21644199 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.362;LDAF=0.1661;AVGPOST=0.8150;RSQ=0.4357;ERATE=0.0155;THETA=0.0059;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 21644505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.824;LDAF=0.2420;AVGPOST=0.8938;RSQ=0.7987;ERATE=0.0023;THETA=0.0072;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 21644508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.530;LDAF=0.1670;AVGPOST=0.8753;RSQ=0.6211;ERATE=0.0129;THETA=0.0097;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 21644632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6010;ERATE=0.0006;THETA=0.0114;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21644657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.770;LDAF=0.0982;AVGPOST=0.9465;RSQ=0.7495;ERATE=0.0100;THETA=0.0178;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21645006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.735;BRSQ=0.598;LDAF=0.5610;AVGPOST=0.7731;RSQ=0.6990;ERATE=0.0045;THETA=0.0066;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 21645090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.467;LDAF=0.1439;AVGPOST=0.8521;RSQ=0.4779;ERATE=0.0132;THETA=0.0105;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 21645100 . CA C 268 PASS INDEL;BAVGPOST=0.977;BRSQ=0.188;LDAF=0.0720;AVGPOST=0.8787;RSQ=0.2574;ERATE=0.0066;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21645563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.887;LDAF=0.8387;AVGPOST=0.9719;RSQ=0.9068;ERATE=0.0237;THETA=0.0011;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 21646126 . C CT 171 PASS INDEL;BAVGPOST=0.992;BRSQ=0.259;LDAF=0.1425;AVGPOST=0.7986;RSQ=0.3475;ERATE=0.0055;THETA=0.0018;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 21646194 . A ATG 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.442;LDAF=0.0558;AVGPOST=0.9139;RSQ=0.3643;ERATE=0.0026;THETA=0.0043;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21647190 . TC T 19 PASS INDEL;BAVGPOST=0.996;BRSQ=0.211;LDAF=0.0490;AVGPOST=0.9122;RSQ=0.2376;ERATE=0.0032;THETA=0.0056;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21648351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21649313 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21649541 . GAAAT G 486 PASS INDEL;BAVGPOST=0.989;BRSQ=0.203;LDAF=0.0134;AVGPOST=0.9793;RSQ=0.3309;ERATE=0.0010;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21649816 . C CA 8 PASS INDEL;BAVGPOST=0.997;BRSQ=0.286;LDAF=0.0513;AVGPOST=0.9125;RSQ=0.2631;ERATE=0.0018;THETA=0.0043;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21650130 . C CT 8268 PASS INDEL;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0591;AVGPOST=0.9962;RSQ=0.9730;ERATE=0.0004;THETA=0.0061;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21650237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0445;AVGPOST=0.9938;RSQ=0.9451;ERATE=0.0007;THETA=0.0010;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21650313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9890;ERATE=0.0003;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21650426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6652;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21650445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6991;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21650552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6525;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21650566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5395;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21650667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8508;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21650727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21650872 . G GTT 1509 PASS INDEL;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0105;AVGPOST=0.9924;RSQ=0.7356;ERATE=0.0008;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21651101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0054;AVGPOST=0.9963;RSQ=0.6959;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21651514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1101;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 21651544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1433;AVGPOST=0.9978;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 21651581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21651810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21651824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8361;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21651878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2883;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 21651901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3158;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0010;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 21651922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21652008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3299;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 21652087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7859;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21652102 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8475;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0006;THETA=0.0003;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 21652182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9555;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0002;THETA=0.0007;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 21652387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7333;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21652409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6541;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21652410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21652491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2532;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 21652525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7241;ERATE=0.0003;THETA=0.0047;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21652527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5676;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21652535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8110;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21652554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5707;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21652596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 21652649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1156;AVGPOST=0.9920;RSQ=0.9690;ERATE=0.0017;THETA=0.0006;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 21652755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9651;AVGPOST=0.9973;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 21652756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21652829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21652833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1245;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 21652842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5647;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21652877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4396;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 21652942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21652960 . TG T 2060 PASS INDEL;BAVGPOST=0.891;BRSQ=0.721;LDAF=0.1723;AVGPOST=0.9039;RSQ=0.7780;ERATE=0.0022;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 21653047 rs71083823 GC G 34462 PASS INDEL;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3198;AVGPOST=0.9904;RSQ=0.9860;ERATE=0.0013;THETA=0.0004;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 21653048 . CA C 1822 PASS INDEL;BAVGPOST=0.887;BRSQ=0.691;LDAF=0.1675;AVGPOST=0.9114;RSQ=0.7859;ERATE=0.0008;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 21653053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21653186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1248;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 21653270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21653433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0135;AVGPOST=0.9986;RSQ=0.9580;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21653570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21653709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8873;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21653760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21653854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21653999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0002;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21654048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3149;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 21654142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21654168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1104;AVGPOST=0.9979;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 21654235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21654333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4399;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 21654520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8400;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21654525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.879;LDAF=0.0196;AVGPOST=0.9946;RSQ=0.9037;ERATE=0.0003;THETA=0.0013;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21654629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7807;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21654734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21654760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21654832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21654838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9521;AVGPOST=0.9982;RSQ=0.9852;ERATE=0.0004;THETA=0.0006;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 21654862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.595;LDAF=0.0141;AVGPOST=0.9877;RSQ=0.6674;ERATE=0.0042;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21654891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1219;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 21654917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21654956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9892;ERATE=0.0002;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21654987 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4108;AVGPOST=0.9960;RSQ=0.9945;ERATE=0.0006;THETA=0.0005;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 21655135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9740;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21655333 . TGTTTGTAC T 254 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21655375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21655413 . G GAT 2796 PASS INDEL;BAVGPOST=0.927;BRSQ=0.380;LDAF=0.0720;AVGPOST=0.9104;RSQ=0.4484;ERATE=0.0062;THETA=0.0014;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21656691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.0804;AVGPOST=0.9928;RSQ=0.9708;ERATE=0.0006;THETA=0.0037;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21657083 . GGAAGGTGATGCTATT G 2759 PASS INDEL;BAVGPOST=0.972;BRSQ=0.350;LDAF=0.0237;AVGPOST=0.9819;RSQ=0.7180;ERATE=0.0011;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21657223 rs5777601 GAAC G 140 PASS INDEL;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0082;AVGPOST=0.9959;RSQ=0.7802;ERATE=0.0033;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21657580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.561;LDAF=0.0581;AVGPOST=0.9592;RSQ=0.7180;ERATE=0.0043;THETA=0.0013;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 21657668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.790;LDAF=0.0161;AVGPOST=0.9923;RSQ=0.7904;ERATE=0.0024;THETA=0.0071;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21658182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0053;AVGPOST=0.9959;RSQ=0.6955;ERATE=0.0008;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21658201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.743;LDAF=0.0734;AVGPOST=0.9674;RSQ=0.8509;ERATE=0.0057;THETA=0.0018;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21658202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0153;AVGPOST=0.9988;RSQ=0.9689;ERATE=0.0004;THETA=0.0070;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21658460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9526;ERATE=0.0004;THETA=0.0034;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21658474 rs10545745 AATTTT A 4218 PASS INDEL;BAVGPOST=0.595;BRSQ=0.272;LDAF=0.4198;AVGPOST=0.6510;RSQ=0.4517;ERATE=0.0046;THETA=0.0023;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 21659008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0199;AVGPOST=0.9933;RSQ=0.8689;ERATE=0.0010;THETA=0.0022;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21659115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.474;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.4942;ERATE=0.0009;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21659122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.3380;ERATE=0.0009;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21659184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21659270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3215;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21659303 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.673;LDAF=0.0121;AVGPOST=0.9905;RSQ=0.6922;ERATE=0.0017;THETA=0.0040;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21659351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0192;AVGPOST=0.9985;RSQ=0.9680;ERATE=0.0005;THETA=0.0019;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21659369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.779;LDAF=0.0239;AVGPOST=0.9920;RSQ=0.8686;ERATE=0.0004;THETA=0.0033;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21659394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.888;LDAF=0.1102;AVGPOST=0.9761;RSQ=0.9222;ERATE=0.0010;THETA=0.0028;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 21659445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4927;ERATE=0.0005;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21659487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.789;LDAF=0.3870;AVGPOST=0.8456;RSQ=0.7765;ERATE=0.0060;THETA=0.0093;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 21659654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0055;AVGPOST=0.9929;RSQ=0.4807;ERATE=0.0005;THETA=0.0088;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21659671 . A AAG 81 PASS INDEL;BAVGPOST=0.987;BRSQ=0.401;LDAF=0.0140;AVGPOST=0.9862;RSQ=0.6483;ERATE=0.0007;THETA=0.0120;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21659805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.478;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.4814;ERATE=0.0009;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21659831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6867;ERATE=0.0005;THETA=0.0157;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21659864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.8075;ERATE=0.0005;THETA=0.0083;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21660612 . C CA 943 PASS INDEL;BAVGPOST=0.983;BRSQ=0.765;LDAF=0.0464;AVGPOST=0.9809;RSQ=0.8485;ERATE=0.0005;THETA=0.0068;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21661012 . CT C 6836 PASS INDEL;BAVGPOST=0.982;BRSQ=0.883;LDAF=0.0636;AVGPOST=0.9860;RSQ=0.9217;ERATE=0.0010;THETA=0.0192;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 21661371 . CA C 329 PASS INDEL;BAVGPOST=0.990;BRSQ=0.394;LDAF=0.0163;AVGPOST=0.9777;RSQ=0.3896;ERATE=0.0016;THETA=0.0097;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21661666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0728;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0003;THETA=0.0016;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21661799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7842;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21661885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21661920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6068;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21661973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.601;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6573;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21662113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0235;AVGPOST=0.9983;RSQ=0.9669;ERATE=0.0004;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21662332 . TTTTA T 41 PASS INDEL;BAVGPOST=0.996;BRSQ=0.512;LDAF=0.0091;AVGPOST=0.9866;RSQ=0.3600;ERATE=0.0027;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21662335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5205;ERATE=0.0012;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21662339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0111;AVGPOST=0.9974;RSQ=0.9015;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21662416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0146;AVGPOST=0.9957;RSQ=0.8901;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21662423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0004;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21662497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.8058;ERATE=0.0002;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21662514 . AT A 1094 PASS INDEL;BAVGPOST=0.874;BRSQ=0.498;LDAF=0.1915;AVGPOST=0.7947;RSQ=0.4550;ERATE=0.0355;THETA=0.0010;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21662635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6227;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21662735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6333;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21662740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0002;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21662861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.7297;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21662898 . T TAC 1085 PASS INDEL;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0170;AVGPOST=0.9952;RSQ=0.8898;ERATE=0.0006;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21662968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0233;AVGPOST=0.9979;RSQ=0.9596;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21663012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21663253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4743;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21663357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21663574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5207;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21663584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21663641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21663653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.0355;AVGPOST=0.9956;RSQ=0.9539;ERATE=0.0004;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 21663891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0201;AVGPOST=0.9975;RSQ=0.9596;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21663961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0043;AVGPOST=0.9959;RSQ=0.6597;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21664080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7959;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21664102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21664109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21664166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8191;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21664217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.964;LDAF=0.7408;AVGPOST=0.9699;RSQ=0.9544;ERATE=0.0053;THETA=0.0004;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 21664219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0004;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21664305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7922;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21664605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0017;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21664619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7637;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 21664669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21664801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7632;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0009;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 21664899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0002;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21664948 . TG T 1852 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0161;AVGPOST=0.9973;RSQ=0.9311;ERATE=0.0006;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21664956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0229;AVGPOST=0.9993;RSQ=0.9889;ERATE=0.0002;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21664994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21665124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21665185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0664;AVGPOST=0.9908;RSQ=0.9445;ERATE=0.0005;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 21665225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0003;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21665248 . T TTA 178 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7309;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21665349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0246;AVGPOST=0.9979;RSQ=0.9718;ERATE=0.0007;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21665381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21665441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0002;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21665540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21665551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.881;LDAF=0.0187;AVGPOST=0.9947;RSQ=0.8972;ERATE=0.0002;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21665748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21666139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0245;AVGPOST=0.9979;RSQ=0.9658;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21666218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5655;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21666231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0402;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0011;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21666399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21666405 . G GC 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21666410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0002;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21666439 . C CATCT 800 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7524;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21666505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21666551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9103;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21666557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6109;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21666624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21666654 . C CTTTGT 2646 PASS INDEL;BAVGPOST=0.990;BRSQ=0.763;LDAF=0.0147;AVGPOST=0.9897;RSQ=0.7712;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21666772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21667059 rs112152849 CGTTT C 911 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9222;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21667103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9446;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21667107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8447;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21667211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9124;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21667224 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0005;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21667248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21667313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.716;LDAF=0.0137;AVGPOST=0.9927;RSQ=0.8142;ERATE=0.0009;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21667463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6952;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21667550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.539;LDAF=0.0034;AVGPOST=0.9958;RSQ=0.5051;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21667646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21667805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8503;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21667981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21668125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8816;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21668165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21668433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4546;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21668640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9068;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21668740 . C CA 1169 PASS INDEL;BAVGPOST=0.482;BRSQ=0.128;LDAF=0.5860;AVGPOST=0.6709;RSQ=0.4102;ERATE=0.0240;THETA=0.0008;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 21668760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.528;LDAF=0.0082;AVGPOST=0.9923;RSQ=0.6484;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21668768 . A AAG 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0066;AVGPOST=0.9934;RSQ=0.6277;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21668777 . CCTT C 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5722;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21668915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8426;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21669166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.6324;AVGPOST=0.9648;RSQ=0.9464;ERATE=0.0048;THETA=0.0014;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 21669340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21669344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8412;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21669484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8675;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21669486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5101;ERATE=0.0004;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21669511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21669680 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0048;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21669816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21669846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9457;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21669958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.482;LDAF=0.0067;AVGPOST=0.9913;RSQ=0.4896;ERATE=0.0014;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21670026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.877;LDAF=0.1573;AVGPOST=0.9775;RSQ=0.9353;ERATE=0.0009;THETA=0.0011;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 21670045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4336;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21670074 . C CA 82 PASS INDEL;BAVGPOST=0.963;BRSQ=0.371;LDAF=0.0957;AVGPOST=0.8702;RSQ=0.4001;ERATE=0.0187;THETA=0.0018;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 21670101 . A AAAAT 528 PASS INDEL;BAVGPOST=0.997;BRSQ=0.660;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7293;ERATE=0.0006;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21670119 . A AT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21670160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5646;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21670189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9769;ERATE=0.0003;THETA=0.0023;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21670235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0003;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21670336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9368;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21670365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21670383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6630;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21670531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21670708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9438;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21670730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.451;LDAF=0.0306;AVGPOST=0.9689;RSQ=0.5797;ERATE=0.0024;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21670853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.477;LDAF=0.0103;AVGPOST=0.9855;RSQ=0.4460;ERATE=0.0015;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21670901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6215;AVGPOST=0.9910;RSQ=0.9846;ERATE=0.0007;THETA=0.0006;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 21670976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21671125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7325;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21671151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0449;AVGPOST=0.9959;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 21671313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21671376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.6021;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21671598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6494;AVGPOST=0.9950;RSQ=0.9909;ERATE=0.0005;THETA=0.0007;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 21671601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4125;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21671830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.563;LDAF=0.0059;AVGPOST=0.9952;RSQ=0.6604;ERATE=0.0007;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21671929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9444;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21672001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6001;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 21672098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.5774;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 21672213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.5777;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 21672215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.889;LDAF=0.0243;AVGPOST=0.9954;RSQ=0.9340;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21672239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6134;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21672288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21672324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21672451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21672488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8836;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21672788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5799;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0012;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 21672849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5994;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 21672886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0087;AVGPOST=0.9968;RSQ=0.8450;ERATE=0.0005;THETA=0.0025;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21672895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5886;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21672908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0362;AVGPOST=0.9989;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 21672930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6712;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21672954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21673000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8272;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21673015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9987;RSQ=0.9779;ERATE=0.0004;THETA=0.0015;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21673017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7651;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21673018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21673114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1356;AVGPOST=0.9938;RSQ=0.9810;ERATE=0.0004;THETA=0.0025;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 21673220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9652;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21673255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673315 . TC T 2586 PASS INDEL;BAVGPOST=0.877;BRSQ=0.728;LDAF=0.2483;AVGPOST=0.8976;RSQ=0.8276;ERATE=0.0014;THETA=0.0012;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 21673367 rs71582226 CT C 35520 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3386;AVGPOST=0.9948;RSQ=0.9912;ERATE=0.0007;THETA=0.0006;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 21673369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6004;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0004;THETA=0.0010;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 21673413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673630 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21673733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21673977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4691;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21674030 . T TA 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7182;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21674041 . C CT 477 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8450;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21674136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5872;AVGPOST=0.9965;RSQ=0.9948;ERATE=0.0008;THETA=0.0021;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 21674158 rs35925721 C CA 76882 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5861;AVGPOST=0.9936;RSQ=0.9904;ERATE=0.0013;THETA=0.0008;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 21674344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8624;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21674437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9589;ERATE=0.0005;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21674438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8298;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21674591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5834;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0012;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 21674814 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.543;LDAF=0.0695;AVGPOST=0.9152;RSQ=0.4655;ERATE=0.0048;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21674926 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.380;LDAF=0.0073;AVGPOST=0.9899;RSQ=0.4345;ERATE=0.0011;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21674948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.603;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.4362;ERATE=0.0015;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21675152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.635;BRSQ=0.380;LDAF=0.5949;AVGPOST=0.6576;RSQ=0.4216;ERATE=0.0502;THETA=0.0022;AC=1485;AN=2184 GT:DS:GL:BD 0.67994505 1
1 21675356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.260;LDAF=0.1643;AVGPOST=0.7697;RSQ=0.2808;ERATE=0.0236;THETA=0.0011;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21675362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.809;BRSQ=0.446;LDAF=0.8005;AVGPOST=0.7782;RSQ=0.4923;ERATE=0.0121;THETA=0.0007;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 21675374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.822;BRSQ=0.702;LDAF=0.4866;AVGPOST=0.7976;RSQ=0.7025;ERATE=0.0115;THETA=0.0005;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 21675382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.440;LDAF=0.0500;AVGPOST=0.9327;RSQ=0.4279;ERATE=0.0060;THETA=0.0014;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21675504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.260;LDAF=0.0195;AVGPOST=0.9766;RSQ=0.5410;ERATE=0.0021;THETA=0.0025;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21675554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.345;LDAF=0.1015;AVGPOST=0.9456;RSQ=0.7778;ERATE=0.0010;THETA=0.0037;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 21675557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.656;BRSQ=0.392;LDAF=0.4332;AVGPOST=0.7505;RSQ=0.6251;ERATE=0.0154;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 21675655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.589;BRSQ=0.214;LDAF=0.7054;AVGPOST=0.7028;RSQ=0.4253;ERATE=0.0167;THETA=0.0014;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 21675685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.608;BRSQ=0.333;LDAF=0.3905;AVGPOST=0.6731;RSQ=0.4496;ERATE=0.0228;THETA=0.0009;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 21675695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.437;LDAF=0.0376;AVGPOST=0.9675;RSQ=0.6373;ERATE=0.0029;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21675720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.892;LDAF=0.2818;AVGPOST=0.9393;RSQ=0.8951;ERATE=0.0056;THETA=0.0007;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 21675764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.732;LDAF=0.0184;AVGPOST=0.9929;RSQ=0.8413;ERATE=0.0007;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21675788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5766;AVGPOST=0.9709;RSQ=0.9571;ERATE=0.0020;THETA=0.0006;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 21675809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0236;AVGPOST=0.9962;RSQ=0.9279;ERATE=0.0010;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21675873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.905;LDAF=0.5624;AVGPOST=0.9505;RSQ=0.9275;ERATE=0.0049;THETA=0.0004;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 21675880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.514;LDAF=0.0086;AVGPOST=0.9889;RSQ=0.5006;ERATE=0.0008;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21675942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.945;LDAF=0.1859;AVGPOST=0.9830;RSQ=0.9538;ERATE=0.0007;THETA=0.0016;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 21675946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.519;LDAF=0.0085;AVGPOST=0.9900;RSQ=0.5436;ERATE=0.0010;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21675951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.405;LDAF=0.0241;AVGPOST=0.9704;RSQ=0.5114;ERATE=0.0027;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21676007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.627;LDAF=0.0118;AVGPOST=0.9941;RSQ=0.7926;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21676067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.764;BRSQ=0.640;LDAF=0.4767;AVGPOST=0.8274;RSQ=0.7793;ERATE=0.0097;THETA=0.0054;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 21676133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.696;BRSQ=0.497;LDAF=0.4574;AVGPOST=0.8082;RSQ=0.7528;ERATE=0.0123;THETA=0.0006;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 21676170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0123;AVGPOST=0.9972;RSQ=0.9061;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21676247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0139;AVGPOST=0.9927;RSQ=0.7915;ERATE=0.0013;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21676327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2548;AVGPOST=0.9902;RSQ=0.9826;ERATE=0.0005;THETA=0.0016;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 21676415 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8626;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21676432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0122;AVGPOST=0.9976;RSQ=0.9237;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21676450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0132;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21676533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5830;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 21676538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9185;AVGPOST=0.9974;RSQ=0.9886;ERATE=0.0004;THETA=0.0021;AC=2007;AN=2184 GT:DS:GL:BD 0.91895604 1
1 21676553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5853;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0006;THETA=0.0007;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 21676578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21676707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.256;LDAF=0.0091;AVGPOST=0.9879;RSQ=0.4537;ERATE=0.0014;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21676712 . CAT C 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4297;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21676717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.264;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.3964;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21676757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0059;AVGPOST=0.9978;RSQ=0.8505;ERATE=0.0005;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21676804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9560;ERATE=0.0005;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21676840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.725;BRSQ=0.485;LDAF=0.6064;AVGPOST=0.7303;RSQ=0.5070;ERATE=0.0736;THETA=0.0011;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 21676922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.821;BRSQ=0.676;LDAF=0.4328;AVGPOST=0.7622;RSQ=0.6100;ERATE=0.0509;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 21676958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1872;AVGPOST=0.9827;RSQ=0.9570;ERATE=0.0007;THETA=0.0012;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 21677083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21677196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9182;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 21677209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3500;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21677212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8380;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 21677240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21677300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21677329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0002;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21677340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8975;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21677355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21677534 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677582 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21677613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4711;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 21677695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21677734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6920;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21677740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7423;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21677865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4465;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0012;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 21677917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.927;LDAF=0.0251;AVGPOST=0.9935;RSQ=0.8929;ERATE=0.0005;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21677994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21678004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4713;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0005;THETA=0.0004;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 21678140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21678164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21678208 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9180;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21678263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8375;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 21678285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21678377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21678446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21678482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3378;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0006;THETA=0.0002;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 21678499 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21678711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21678845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5852;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21678891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21678992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.7019;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21679180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7628;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21679291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21679408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21679482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9245;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21679503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9433;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21679504 . TC T 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7190;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21679529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21679751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21679913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21679926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3503;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0009;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21679935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21679958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7671;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21680083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21680179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21680190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4818;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21680486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.953;LDAF=0.3411;AVGPOST=0.9895;RSQ=0.9832;ERATE=0.0006;THETA=0.0004;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 21680666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.844;LDAF=0.0255;AVGPOST=0.9909;RSQ=0.8641;ERATE=0.0007;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21680732 . CT C 687 PASS INDEL;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0285;AVGPOST=0.9994;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21680798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6002;ERATE=0.0004;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21680827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.441;LDAF=0.0097;AVGPOST=0.9879;RSQ=0.5011;ERATE=0.0025;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21680849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9971;RSQ=0.9325;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21680878 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4610;AVGPOST=0.9832;RSQ=0.9766;ERATE=0.0009;THETA=0.0011;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 21681083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4229;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21681092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.701;LDAF=0.0130;AVGPOST=0.9938;RSQ=0.8105;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21681122 . G GAT 191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21681169 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21681182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.844;LDAF=0.8693;AVGPOST=0.9560;RSQ=0.8559;ERATE=0.0110;THETA=0.0006;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 21681224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8653;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21681258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21681311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.8767;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21681376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5217;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21681466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7880;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21681577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3496;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 21681619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4124;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21681644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.878;LDAF=0.8042;AVGPOST=0.9480;RSQ=0.8815;ERATE=0.0068;THETA=0.0004;AC=1779;AN=2184 GT:DS:GL:BD 0.81456041 1
1 21681703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7176;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21681765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3501;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0006;THETA=0.0006;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 21681772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21681794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6734;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21681904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3497;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 21681909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.963;LDAF=0.3437;AVGPOST=0.9806;RSQ=0.9704;ERATE=0.0028;THETA=0.0027;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 21681961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.518;LDAF=0.0188;AVGPOST=0.9798;RSQ=0.5815;ERATE=0.0040;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21682114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9941;RSQ=0.8774;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21682155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6579;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21682207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0048;AVGPOST=0.9935;RSQ=0.4872;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21682276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4736;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21682358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1511;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21682361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1515;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0005;THETA=0.0008;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21682378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21682382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21682517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6699;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21682567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8361;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21682597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5971;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21682718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7722;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21682795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1607;AVGPOST=0.9890;RSQ=0.9681;ERATE=0.0018;THETA=0.0007;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 21682861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8399;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21682876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1610;AVGPOST=0.9977;RSQ=0.9934;ERATE=0.0004;THETA=0.0011;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 21682878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.893;LDAF=0.1082;AVGPOST=0.9917;RSQ=0.9686;ERATE=0.0005;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 21683073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21683191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0575;AVGPOST=0.9977;RSQ=0.9805;ERATE=0.0005;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 21683195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.619;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.4553;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21683255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5909;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21683479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.646;LDAF=0.8508;AVGPOST=0.8745;RSQ=0.6196;ERATE=0.0267;THETA=0.0024;AC=1940;AN=2184 GT:DS:GL:BD 0.88827837 1
1 21683506 . A AAAAAC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5140;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21683527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21683568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1596;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 21683610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9979;RSQ=0.9192;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21683661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.1585;AVGPOST=0.9957;RSQ=0.9875;ERATE=0.0006;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 21683743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.1578;AVGPOST=0.9972;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 21683747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21683750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6145;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21683765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0053;AVGPOST=0.9934;RSQ=0.4608;ERATE=0.0008;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21683869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1596;AVGPOST=0.9968;RSQ=0.9895;ERATE=0.0005;THETA=0.0004;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 21683924 . T TC 566 PASS INDEL;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0125;AVGPOST=0.9948;RSQ=0.8401;ERATE=0.0010;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21683937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9470;AVGPOST=0.9985;RSQ=0.9875;ERATE=0.0005;THETA=0.0005;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 21683992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21684043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.2163;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21684076 . T TC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6627;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21684114 . A AT 91 PASS INDEL;BAVGPOST=0.985;BRSQ=0.512;LDAF=0.0269;AVGPOST=0.9648;RSQ=0.4704;ERATE=0.0071;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21684176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21684207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1592;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 21684290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21684334 . AGT A 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21684429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9974;RSQ=0.8859;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21684458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1606;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 21684532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1599;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 21684570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0084;AVGPOST=0.9979;RSQ=0.8789;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21684587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.582;LDAF=0.0085;AVGPOST=0.9922;RSQ=0.6703;ERATE=0.0009;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21684617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0300;AVGPOST=0.9973;RSQ=0.9664;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21684697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7844;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21684752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.964;LDAF=0.5865;AVGPOST=0.9686;RSQ=0.9547;ERATE=0.0040;THETA=0.0003;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 21684792 . TTTTA T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4978;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21684902 . T TC 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21684966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1101;AVGPOST=0.9971;RSQ=0.9865;ERATE=0.0006;THETA=0.0006;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 21684974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9181;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21684983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21685000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1613;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21685016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.962;LDAF=0.1591;AVGPOST=0.9974;RSQ=0.9921;ERATE=0.0005;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 21685050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21685169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21685261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21685354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7977;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21685409 . GTC G 326 PASS INDEL;BAVGPOST=0.938;BRSQ=0.638;LDAF=0.0838;AVGPOST=0.9350;RSQ=0.7195;ERATE=0.0027;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 21685543 rs111546215 CTCTT C 13583 PASS INDEL;BAVGPOST=0.981;BRSQ=0.942;LDAF=0.1515;AVGPOST=0.9924;RSQ=0.9783;ERATE=0.0004;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 21685551 . TC T 5353 PASS INDEL;BAVGPOST=0.979;BRSQ=0.935;LDAF=0.1535;AVGPOST=0.9816;RSQ=0.9475;ERATE=0.0020;THETA=0.0006;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 21685556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1594;AVGPOST=0.9956;RSQ=0.9882;ERATE=0.0006;THETA=0.0007;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 21685649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0092;AVGPOST=0.9993;RSQ=0.9632;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21685684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5602;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21685707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21685911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1595;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 21686000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8436;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21686325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1596;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 21686484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21686571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3284;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0007;THETA=0.0033;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 21686610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1605;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0016;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 21686658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1610;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0004;THETA=0.0011;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21686688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1558;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 21686715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1610;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 21686734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21686975 . A AAAGC 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4933;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21687050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1604;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 21687128 . T TA 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5229;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21687172 rs113881186 T TA 12260 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1582;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 21687173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0097;AVGPOST=0.9976;RSQ=0.9129;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21687175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21687760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21687838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9669;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21687929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5614;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21687946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21688039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7617;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21688090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0176;AVGPOST=0.9973;RSQ=0.9373;ERATE=0.0004;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21688114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6576;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21688146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0481;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0004;THETA=0.0009;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 21688190 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21688194 . G GTAT 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.3909;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21688221 . TTTTTTTTTG T 144 PASS INDEL;BAVGPOST=0.995;BRSQ=0.603;LDAF=0.0087;AVGPOST=0.9911;RSQ=0.5777;ERATE=0.0011;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21688271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0167;AVGPOST=0.9987;RSQ=0.9643;ERATE=0.0005;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21688407 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8979;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21688498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.419;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4025;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21688508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6823;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21688699 . TC T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21688929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4285;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0014;THETA=0.0008;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 21689045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3622;ERATE=0.0007;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21689162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3451;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21689211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.602;LDAF=0.0346;AVGPOST=0.9867;RSQ=0.8551;ERATE=0.0011;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21689338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.864;LDAF=0.0395;AVGPOST=0.9959;RSQ=0.9602;ERATE=0.0004;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 21689395 rs35346996 C CA 1253 PASS INDEL;BAVGPOST=0.940;BRSQ=0.547;LDAF=0.1109;AVGPOST=0.8753;RSQ=0.4837;ERATE=0.0257;THETA=0.0007;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 21689404 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6634;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21689561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21689638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21689775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5396;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21689913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3780;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0006;THETA=0.0006;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 21689938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21690063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7502;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21690240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5722;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21690251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4339;AVGPOST=0.9941;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 21690312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7216;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21690339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0480;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0004;THETA=0.0009;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 21690368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6814;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21690394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9344;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21690415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21690425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21690439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8114;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21690543 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21690547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6099;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21690569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21690614 . ACATTTT A 914 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9384;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21690715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21690731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0122;AVGPOST=0.9976;RSQ=0.9235;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21690805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0147;AVGPOST=0.9905;RSQ=0.7375;ERATE=0.0012;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21690806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0042;AVGPOST=0.9935;RSQ=0.3637;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21690853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0127;AVGPOST=0.9972;RSQ=0.9128;ERATE=0.0004;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21690859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0056;AVGPOST=0.9963;RSQ=0.7414;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21690901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.860;LDAF=0.0505;AVGPOST=0.9748;RSQ=0.8070;ERATE=0.0044;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 21691001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8606;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21691100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21691177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0456;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0003;THETA=0.0015;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21691390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6294;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21691562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.840;LDAF=0.0332;AVGPOST=0.9936;RSQ=0.9287;ERATE=0.0005;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21691570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.836;LDAF=0.0330;AVGPOST=0.9930;RSQ=0.9209;ERATE=0.0006;THETA=0.0009;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21691572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.837;LDAF=0.0339;AVGPOST=0.9929;RSQ=0.9220;ERATE=0.0005;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 21691576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.556;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4483;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21691577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.795;LDAF=0.0141;AVGPOST=0.9913;RSQ=0.7665;ERATE=0.0005;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21691588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.768;LDAF=0.0298;AVGPOST=0.9961;RSQ=0.9523;ERATE=0.0004;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21691600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.918;LDAF=0.0552;AVGPOST=0.9844;RSQ=0.8925;ERATE=0.0016;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21691668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3885;AVGPOST=0.9936;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 21691737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0758;AVGPOST=0.9905;RSQ=0.9520;ERATE=0.0006;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 21691776 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.845;LDAF=0.0208;AVGPOST=0.9928;RSQ=0.8727;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21691821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0051;AVGPOST=0.9936;RSQ=0.5015;ERATE=0.0010;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21692044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3751;AVGPOST=0.9934;RSQ=0.9899;ERATE=0.0011;THETA=0.0008;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 21692189 . AG A 589 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9353;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21692260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9714;ERATE=0.0004;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21692368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5796;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21692379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9379;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21692470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4924;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21692573 . A AT 632 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8392;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21692619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8498;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21692698 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21692755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6456;ERATE=0.0004;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21692857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21692886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0772;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 21693054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9837;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21693125 . AT A 515 PASS INDEL;BAVGPOST=0.992;BRSQ=0.865;LDAF=0.0286;AVGPOST=0.9855;RSQ=0.8054;ERATE=0.0016;THETA=0.0015;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21693151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3837;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21693402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4449;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21693404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6833;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21693504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6076;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21693590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21693752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0091;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0004;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21693898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21693904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21693933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21693959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21694037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21694054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0091;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21694067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21694101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21694146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21694173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8190;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21694261 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7014;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21694281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21694373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0083;AVGPOST=0.9953;RSQ=0.7805;ERATE=0.0004;THETA=0.0071;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21694411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21694582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21694606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21694631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5615;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21694735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9030;ERATE=0.0005;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21694818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8584;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21694932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0064;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21694933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7275;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21694962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21695076 rs112353734 AT A 386 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0041;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21695175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21695238 . GA G 1159 PASS INDEL;BAVGPOST=0.995;BRSQ=0.847;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8541;ERATE=0.0006;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21695694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21695837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21695956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21696411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0208;AVGPOST=0.9981;RSQ=0.9671;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21696438 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3358;AVGPOST=0.9947;RSQ=0.9914;ERATE=0.0005;THETA=0.0006;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 21696522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5902;AVGPOST=0.9952;RSQ=0.9922;ERATE=0.0007;THETA=0.0044;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 21696558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21696705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21696731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7346;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21696785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7223;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21696988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.4190;AVGPOST=0.9942;RSQ=0.9910;ERATE=0.0008;THETA=0.0004;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 21697065 . AG A 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9338;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21697153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21697271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4097;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21697439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.657;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.6743;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21697440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0138;AVGPOST=0.9970;RSQ=0.9102;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21697499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3191;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697833 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4107;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21697994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1269;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 21698127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1809;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 21698191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8301;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21698287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21698294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6297;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21698326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8339;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21698383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21698418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21698422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5991;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21698423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3475;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 21698587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21698669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21698787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21698833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1271;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0018;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 21698836 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6221;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21698865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8103;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21698944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2207;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0005;THETA=0.0006;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 21698949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21698982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1267;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 21699010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6574;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21699067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1901;AVGPOST=0.9974;RSQ=0.9937;ERATE=0.0005;THETA=0.0001;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 21699164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9713;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21699224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8966;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21699266 . AG A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4831;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21699319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7148;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21699351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5212;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21699539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1955;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 21699541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21699568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2060;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 21699609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21699634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2209;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 21699747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21700042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3066;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 21700125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21700158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21700173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0004;THETA=0.0078;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21700210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0163;AVGPOST=0.9953;RSQ=0.8935;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21700224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9781;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21700249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2046;AVGPOST=0.9937;RSQ=0.9855;ERATE=0.0006;THETA=0.0008;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 21700256 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21700291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21700325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3074;AVGPOST=0.9946;RSQ=0.9907;ERATE=0.0004;THETA=0.0068;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 21700328 . A AT 322 PASS INDEL;BAVGPOST=0.935;BRSQ=0.324;LDAF=0.1710;AVGPOST=0.7966;RSQ=0.4709;ERATE=0.0041;THETA=0.0065;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 21700498 rs57155803 T TG 2991 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0190;AVGPOST=0.9984;RSQ=0.9704;ERATE=0.0005;THETA=0.0086;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21700499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1285;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0003;THETA=0.0075;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 21700547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7323;ERATE=0.0004;THETA=0.0081;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21700689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0117;AVGPOST=0.9971;RSQ=0.9061;ERATE=0.0010;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21700727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0140;AVGPOST=0.9979;RSQ=0.9377;ERATE=0.0003;THETA=0.0182;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21700742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0049;AVGPOST=0.9953;RSQ=0.6055;ERATE=0.0010;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21700835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.805;LDAF=0.0156;AVGPOST=0.9883;RSQ=0.7145;ERATE=0.0016;THETA=0.0253;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21700863 MERGED_DEL_2_5955 CTCCTGGCCGCAAAGTTGTTTTCAGTCATAGTATTGTCATTACCATTTTCTCATTATTGTAGCCATGCCTTCTTTTGTCTCTGCTACTCTGAGACTCCATCATTATCAGGGAGCCTACTTGTGAGGCAATGTCTTCACCTTTGTCCTTGACCTATTTCTGTTATACTTTCCAAAGGTGCTGATACTTTTA CGCCTGGCCGCA . . SV;BAVGPOST=0.952;BRSQ=0.921;LDAF=0.4300;AVGPOST=0.9316;RSQ=0.9014;ERATE=0.0131;THETA=0.0015;CIEND=-155;215;CIPOS=-155;216;END=157540876;HOMLEN=2;HOMSEQ=TC;SOURCE=AssembledBreakpoints_157540 GT:DS:GL:BD 0.42032966 0
1 21700874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0091;AVGPOST=0.9964;RSQ=0.8373;ERATE=0.0008;THETA=0.0093;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21700924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.8625;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21700987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.467;LDAF=0.0071;AVGPOST=0.9868;RSQ=0.2487;ERATE=0.0005;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.707;LDAF=0.7199;AVGPOST=0.8723;RSQ=0.7981;ERATE=0.0048;THETA=0.0022;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 21701085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3478;AVGPOST=0.9912;RSQ=0.9864;ERATE=0.0007;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 21701161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0556;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 21701178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0101;AVGPOST=0.9991;RSQ=0.9724;ERATE=0.0004;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21701202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3776;AVGPOST=0.9928;RSQ=0.9907;ERATE=0.0005;THETA=0.0014;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 21701205 . GTTA G 657 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21701218 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0099;AVGPOST=0.9982;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21701278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21701299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0032;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21701361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9811;ERATE=0.0003;THETA=0.0030;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21701400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21701463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4866;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21701567 rs58486329 AC A 5766 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0345;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21701579 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0651;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21701648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0831;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 21701709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21701719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0649;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0009;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21701754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3753;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 21701789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21701815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21701829 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4439;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 21701898 . A ATT 645 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8046;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21702002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21702169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21702170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21702223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0648;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21702256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0649;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21702259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4442;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 21702269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0647;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21702281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4439;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 21702298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2944;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 21702386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0444;AVGPOST=0.9988;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21702422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3790;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0010;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 21702440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8989;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21702475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1504;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 21702673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21702707 rs75928359 G GGA 65483 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4435;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0010;THETA=0.0003;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 21702732 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21702755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21702873 . TC T 1086 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8816;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21702888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21702890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8606;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21702935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21702948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8767;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21702989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0001;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21703066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9323;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21703126 . T TC 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21703185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0148;AVGPOST=0.9993;RSQ=0.9796;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21703219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21703268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21703289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7427;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21703469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21703475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0466;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 21703601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1756;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 21703614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21703763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2468;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 21703812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21703828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21704032 . ATT A 1065 PASS INDEL;BAVGPOST=0.989;BRSQ=0.678;LDAF=0.0270;AVGPOST=0.9726;RSQ=0.6101;ERATE=0.0057;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21704046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3222;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0002;THETA=0.0006;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 21704047 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0431;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0001;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21704122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2598;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 21704148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21704180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0417;AVGPOST=0.9987;RSQ=0.9858;ERATE=0.0002;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 21704184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9606;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21704411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6236;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21704504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6235;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 21704528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21704582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21704588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9992;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21704690 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21704729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9309;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21704769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3229;AVGPOST=0.9963;RSQ=0.9929;ERATE=0.0010;THETA=0.0002;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 21704804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21704920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21704969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21705152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.843;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21705165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5614;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21705200 . ATATATCTC A 11446 PASS INDEL;BAVGPOST=0.923;BRSQ=0.743;LDAF=0.1878;AVGPOST=0.9027;RSQ=0.7515;ERATE=0.0286;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 21705276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21705332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21705362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8749;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21705483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21705496 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21705510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21705527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7118;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21705566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21705586 . G GC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21705610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.6157;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21705733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8052;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21705754 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6111;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21705801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6299;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21705892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3221;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 21705942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6193;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21705964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21706024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7109;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21706033 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21706329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21706425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21706467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2467;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 21706499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5621;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21706653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21706763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5027;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21706802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8372;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21706914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8570;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21706916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0467;AVGPOST=0.9992;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 21706957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5681;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21706982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8185;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21706987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21707198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9674;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21707226 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1743;AVGPOST=0.9954;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 21707360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5694;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21707489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21707495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4409;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21707658 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4460;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21708049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21708065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9216;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21708168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21708225 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21708229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21708294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21708308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21708318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8183;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21708381 . CA C 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21708481 . GGAA G 883 PASS INDEL;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0129;AVGPOST=0.9970;RSQ=0.9138;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21708519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3934;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 21708526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8743;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21708540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8384;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21708546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21708589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0883;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 21708592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9458;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21708599 . C CA 18 PASS INDEL;BAVGPOST=0.995;BRSQ=0.497;LDAF=0.0126;AVGPOST=0.9865;RSQ=0.5770;ERATE=0.0025;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21708600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.774;LDAF=0.0267;AVGPOST=0.9761;RSQ=0.6458;ERATE=0.0074;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21708733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9006;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21708802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21708859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21708964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8741;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21708972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21709045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709135 . AT A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9182;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21709219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7283;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21709421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9020;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21709584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21709608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21709636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21709646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8055;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21709660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7007;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709797 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5264;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21709801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7890;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21710024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21710289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21710297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21710650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21710661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21710662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7148;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21710963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6470;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21711290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21711322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21711451 rs34816537 TC T 5124 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0892;AVGPOST=0.9957;RSQ=0.9787;ERATE=0.0006;THETA=0.0004;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 21711474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6706;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21711522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0142;AVGPOST=0.9984;RSQ=0.9507;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21711680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.3995;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21711779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9757;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21711798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21711848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1936;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 21711909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21711977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4754;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1856;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 21712231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21712290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21712602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8444;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21712603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6548;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0045;AVGPOST=0.9999;RSQ=0.9869;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21712675 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8711;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21712768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21712818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3990;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21712933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8079;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0006;THETA=0.0003;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 21712991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9544;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21713001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8091;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21713018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21713145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21713238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9857;ERATE=0.0003;THETA=0.0018;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21713239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0186;AVGPOST=0.9986;RSQ=0.9722;ERATE=0.0006;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21713299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21713314 . A AT 1573 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9768;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21713342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21713421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8525;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21713481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21713527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21713602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21713626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8794;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21713639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21713645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7241;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21713696 . T TA 216 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21713790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7231;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21713794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1731;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0052;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 21713796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.8066;ERATE=0.0012;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21713818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21713860 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.8016;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21713891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21713919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7542;ERATE=0.0010;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21714030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21714069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0003;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21714261 . TAC T 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21714290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21714395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9764;ERATE=0.0004;THETA=0.0076;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21714411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21714436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6827;ERATE=0.0003;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21714530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9743;ERATE=0.0004;THETA=0.0061;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21714552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7098;ERATE=0.0021;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21714635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6230;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21714658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21714754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21714769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9176;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21714836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7122;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9600;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21715241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7104;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5162;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21715393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0009;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21715420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21715424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4831;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9316;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21715591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715596 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715607 . T TG 12785 PASS INDEL;BAVGPOST=0.894;BRSQ=0.795;LDAF=0.5823;AVGPOST=0.8669;RSQ=0.7903;ERATE=0.0461;THETA=0.0008;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 21715669 rs76561765 G GT 71453 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7047;AVGPOST=0.9937;RSQ=0.9881;ERATE=0.0007;THETA=0.0002;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 21715670 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3567;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21715684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21715687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0028;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21715710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1785;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0005;THETA=0.0017;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 21715718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.9995;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 21715849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21715916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21716013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21716014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21716046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21716459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21716468 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7488;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21716517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21716562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21716644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7459;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21717000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21717045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717125 rs10584474 CAT C 25597 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1871;AVGPOST=0.9964;RSQ=0.9908;ERATE=0.0006;THETA=0.0006;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 21717215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21717372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21717483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21717734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21717808 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21717820 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4902;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21717903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0543;AVGPOST=0.9984;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 21718051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21718102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21718105 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21718120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21718496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2574;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 21718654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2574;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 21718661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21718666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8132;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21718768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0132;AVGPOST=0.9988;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21718853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21718889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0119;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21718890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21718894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21719000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2578;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 21719001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21719011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21719058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4217;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21719071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2102;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 21719221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21719224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21719352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21719399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21719406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9073;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21719486 . AAC A 5151 PASS INDEL;BAVGPOST=0.952;BRSQ=0.853;LDAF=0.1864;AVGPOST=0.9606;RSQ=0.9123;ERATE=0.0023;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 21719540 . CA C 454 PASS INDEL;BAVGPOST=0.912;BRSQ=0.666;LDAF=0.1193;AVGPOST=0.9208;RSQ=0.7416;ERATE=0.0012;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 21719543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21719581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2096;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0003;THETA=0.0006;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 21719658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5433;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21719690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6705;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21719730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21719782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7787;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21719808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21719817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7042;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21719884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5224;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21719902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0203;AVGPOST=0.9956;RSQ=0.9205;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21719954 . C CGTG 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21720319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21720437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21720583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6269;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21720644 . AG A 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7307;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21720779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7444;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21720800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21720834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21720844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21720995 rs71771773 CTA C 33708 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2582;AVGPOST=0.9940;RSQ=0.9904;ERATE=0.0005;THETA=0.0010;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 21721124 . TAA T 33667 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2573;AVGPOST=0.9950;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 21721127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21721238 . GT G 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6884;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21721298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21721346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21721568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.9020;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21721610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9143;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21721714 . CT C 269 PASS INDEL;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7010;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21721730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21721731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9024;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21721738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21721804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8185;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21721814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21721874 . G GA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21721892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9008;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21721898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2097;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 21721959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21722140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6885;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21722255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21722399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9517;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21722424 . ACT A 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6673;ERATE=0.0005;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21722444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21722476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21722482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.960;LDAF=0.1728;AVGPOST=0.9923;RSQ=0.9811;ERATE=0.0007;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 21722534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7795;ERATE=0.0011;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21722545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0112;AVGPOST=0.9975;RSQ=0.9209;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21722613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21722792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8856;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21722836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21722844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2093;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 21722865 . CA C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5518;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21722912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21723084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21723238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21723441 . CTG C 558 PASS INDEL;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8166;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21723465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21723659 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0792;AVGPOST=0.9981;RSQ=0.9896;ERATE=0.0004;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 21723689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2349;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 21723768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5570;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21723904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9989;RSQ=0.9858;ERATE=0.0004;THETA=0.0027;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21723915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8810;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21724003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21724113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8180;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21724251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21724283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7231;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21724339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1761;AVGPOST=0.9964;RSQ=0.9910;ERATE=0.0006;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 21724396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21724434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0766;AVGPOST=0.9986;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 21724485 . T TG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3564;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21724532 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21724647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21724739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3279;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 21724783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4020;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 21724835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4733;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21724837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7995;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21725010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0836;AVGPOST=0.9973;RSQ=0.9866;ERATE=0.0003;THETA=0.0058;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 21725039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.867;LDAF=0.2054;AVGPOST=0.9570;RSQ=0.9031;ERATE=0.0041;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 21725215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.850;LDAF=0.0172;AVGPOST=0.9958;RSQ=0.8937;ERATE=0.0004;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21725373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.910;LDAF=0.5937;AVGPOST=0.8878;RSQ=0.8500;ERATE=0.0223;THETA=0.0003;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 21725396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2171;AVGPOST=0.9971;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 21725564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8548;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21725577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21725665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21725667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7785;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21725796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21725836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7066;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21725873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21725912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21726038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21726062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8011;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21726155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6417;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 21726178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21726181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21726302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6163;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 21726512 . CTGAAG C 5381 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0597;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0004;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21726549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0070;AVGPOST=0.9956;RSQ=0.7581;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21726684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2163;AVGPOST=0.9971;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 21726729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1982;AVGPOST=0.9961;RSQ=0.9911;ERATE=0.0007;THETA=0.0002;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 21726882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21726976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21726999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1078;AVGPOST=0.9984;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 21727023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1997;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 21727029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4929;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0007;THETA=0.0003;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 21727052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21727137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0609;AVGPOST=0.9979;RSQ=0.9846;ERATE=0.0004;THETA=0.0001;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21727189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1147;AVGPOST=0.9987;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 21727193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5744;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21727197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7791;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21727204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1139;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 21727262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6144;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21727263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21727268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21727325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5278;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21727345 . T TTTTA 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5232;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21727599 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21727645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.1790;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0006;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 21727664 . T TC 32 PASS INDEL;BAVGPOST=0.993;BRSQ=0.425;LDAF=0.0212;AVGPOST=0.9678;RSQ=0.3975;ERATE=0.0054;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21727693 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.884;LDAF=0.6004;AVGPOST=0.8744;RSQ=0.8130;ERATE=0.0534;THETA=0.0003;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 21727708 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1088;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 21727780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21727800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21727918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21727922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21728006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8148;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21728007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7443;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21728056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21728125 . G GT 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728141 . G GT 310 PASS INDEL;BAVGPOST=0.984;BRSQ=0.574;LDAF=0.0345;AVGPOST=0.9622;RSQ=0.5439;ERATE=0.0123;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21728149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21728203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1986;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 21728302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9712;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21728321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7661;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21728434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1322;AVGPOST=0.9983;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21728451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.545;LDAF=0.0097;AVGPOST=0.9904;RSQ=0.6258;ERATE=0.0020;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21728460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6732;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21728521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8586;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21728549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0070;AVGPOST=0.9960;RSQ=0.7870;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21728583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21728639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1059;AVGPOST=0.9981;RSQ=0.9913;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 21728754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5857;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21728808 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.7548;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21728847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4451;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21728851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21728857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0574;AVGPOST=0.9978;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21729016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3782;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21729128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21729130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21729274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21729278 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0071;AVGPOST=0.9969;RSQ=0.8609;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21729358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9990;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21729387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21729396 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0183;AVGPOST=0.9983;RSQ=0.9632;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21729399 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21729688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21729722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9613;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21729775 . T TA 5477 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21729867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8497;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21729935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0181;AVGPOST=0.9983;RSQ=0.9617;ERATE=0.0003;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21730080 . TAGA T 182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21730205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21730229 . TG T 11374 PASS INDEL;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0886;AVGPOST=0.9973;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 21730255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0886;AVGPOST=0.9971;RSQ=0.9875;ERATE=0.0004;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 21730262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1057;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0004;THETA=0.0032;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 21730263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1541;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 21730421 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21730603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1539;AVGPOST=0.9973;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 21730698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21730894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21730933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21730985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21731014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0847;AVGPOST=0.9970;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 21731126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21731135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21731326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6937;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21731337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1059;AVGPOST=0.9964;RSQ=0.9865;ERATE=0.0006;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 21731358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.921;LDAF=0.2652;AVGPOST=0.9384;RSQ=0.8997;ERATE=0.0065;THETA=0.0006;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 21731362 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4821;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21731499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21731536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8580;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21731588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5432;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21731745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1543;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 21731787 . TTTTCTCA T 553 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.7993;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21731795 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5065;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21731843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7124;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21731977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0183;AVGPOST=0.9973;RSQ=0.9506;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21732045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7817;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21732278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21732363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21732419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21732455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21732523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21732529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1541;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 21732657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21732831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7320;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21733180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21733260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9586;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21733296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0131;AVGPOST=0.9985;RSQ=0.9562;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21733410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7589;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21733611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21733697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21733709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21733802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8006;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21733870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21733912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6589;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21733960 rs112649211 TTATC T 699 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9606;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21734083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21734102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0233;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0018;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21734111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21734230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21734329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0602;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 21734435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7926;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21734625 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8481;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21734634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8991;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21734681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7097;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21734840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.0730;AVGPOST=0.9972;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 21734868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9079;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21734869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5493;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21734924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21734968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8874;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21735023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9261;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7427;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21735091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21735306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8289;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735388 . A AG 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6207;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.946;LDAF=0.0527;AVGPOST=0.9911;RSQ=0.9380;ERATE=0.0005;THETA=0.0009;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 21735408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21735509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735547 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21735608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21735688 . TAAATTGAG T 949 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8730;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21735713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0525;AVGPOST=0.9985;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 21735827 . CAG C 2061 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9677;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21735842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21735848 . TC T 85 PASS INDEL;BAVGPOST=0.986;BRSQ=0.697;LDAF=0.0123;AVGPOST=0.9932;RSQ=0.7834;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21735853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0718;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21735854 . AC A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6255;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7245;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21735924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21735940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8961;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21736046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1903;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 21736142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21736231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8597;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0604;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 21736387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21736447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0773;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 21736455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21736501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7813;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21736509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6562;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21736532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1914;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 21736615 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5846;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7357;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736703 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4922;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6449;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21736865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21736948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9454;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21736950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21737030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6547;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21737113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7466;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21737153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7716;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21737196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0449;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 21737446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21737654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0231;AVGPOST=0.9983;RSQ=0.9748;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21737690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21737691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6825;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21737748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5320;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21737749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21738121 . TG T 56 PASS INDEL;BAVGPOST=0.996;BRSQ=0.699;LDAF=0.0108;AVGPOST=0.9887;RSQ=0.5992;ERATE=0.0037;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21738271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5399;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21738292 . CATAA C 6564 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0522;AVGPOST=0.9989;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 21738303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21738351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21738443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9073;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21738510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7770;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21738533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21738546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21738551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21738587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9678;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21738677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0006;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21738716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7747;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21738735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3905;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21738806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7254;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21738840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0579;AVGPOST=0.9979;RSQ=0.9843;ERATE=0.0005;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21738882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8930;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21739014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7851;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21739195 rs78479139 G GT 10830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0571;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21739248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8403;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21739287 . GCAA G 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21739292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0573;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0024;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21739329 . CTT C 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21739332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21739603 . T TG 107 PASS INDEL;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21739679 . TCTC T 403 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6675;ERATE=0.0006;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21739767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21739788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9423;ERATE=0.0005;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21739809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21739929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21739933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21739939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0620;AVGPOST=0.9979;RSQ=0.9844;ERATE=0.0004;THETA=0.0008;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 21739999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21740010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9213;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21740050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1963;AVGPOST=0.9950;RSQ=0.9879;ERATE=0.0004;THETA=0.0007;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 21740305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0571;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21740451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8564;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21740544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21740597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8776;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21740770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21740775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21740839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21741008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0201;AVGPOST=0.9991;RSQ=0.9792;ERATE=0.0003;THETA=0.0013;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21741012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21741192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741257 rs75136414 AG A 7306 PASS INDEL;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0577;AVGPOST=0.9979;RSQ=0.9846;ERATE=0.0005;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21741287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0015;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21741533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0186;AVGPOST=0.9961;RSQ=0.9143;ERATE=0.0008;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21741589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21741620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21741657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8314;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21741722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21741851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21741884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21741939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0599;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 21741947 . A AACAT 15223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0574;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0009;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 21741960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21742038 rs58775333 CA C 6625 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0315;AVGPOST=0.9987;RSQ=0.9821;ERATE=0.0004;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21742241 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5901;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21742267 . CA C 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742454 . A ATT 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6670;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6926;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742581 . TG T 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5382;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21742795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21742845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4961;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21742937 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9994;RSQ=0.0725;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 21742984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6148;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21742989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6426;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21742993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.9918;AVGPOST=0.9967;RSQ=0.8444;ERATE=0.0008;THETA=0.0011;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 21743064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7573;ERATE=0.0007;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21743079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0;LDAF=0.9995;AVGPOST=0.9989;RSQ=0.0907;ERATE=0.0004;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 21743089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8230;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21743220 . AT A 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21743277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21743347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21743348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0601;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0008;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 21743389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21743482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7417;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21743488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21743550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21743559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8185;ERATE=0.0007;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21743647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1369;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 21743650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5130;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21743659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8435;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21743731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21743766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0998;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 21744015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9950;AVGPOST=0.9982;RSQ=0.8531;ERATE=0.0004;THETA=0.0004;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 21744241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6349;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21744288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1197;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 21744320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9426;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21744349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21744514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21744603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21744656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21744657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1326;AVGPOST=0.9962;RSQ=0.9869;ERATE=0.0007;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 21744681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21744941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0525;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 21744988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 21744996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9189;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21745016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0203;AVGPOST=0.9987;RSQ=0.9791;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21745071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2869;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 21745093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21745326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0421;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21745334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7868;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8428;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21745432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21745459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21745663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0204;AVGPOST=0.9993;RSQ=0.9842;ERATE=0.0004;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21745748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0166;AVGPOST=0.9962;RSQ=0.9128;ERATE=0.0005;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21745793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9089;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21745795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.945;LDAF=0.1912;AVGPOST=0.9901;RSQ=0.9768;ERATE=0.0012;THETA=0.0003;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 21745813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21745846 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.329;LDAF=0.9543;AVGPOST=0.9281;RSQ=0.3558;ERATE=0.0128;THETA=0.0011;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 21745978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0105;AVGPOST=0.9957;RSQ=0.8288;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21746010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9984;RSQ=0.9663;ERATE=0.0006;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21746013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0430;AVGPOST=0.9981;RSQ=0.9842;ERATE=0.0004;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 21746014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9959;RSQ=0.6794;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21746028 . A AAAGT 520 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0074;AVGPOST=0.9925;RSQ=0.6240;ERATE=0.0013;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21746029 . AAT A 4739 PASS INDEL;BAVGPOST=0.991;BRSQ=0.942;LDAF=0.0811;AVGPOST=0.9954;RSQ=0.9766;ERATE=0.0007;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 21746031 rs11293377 AT A 6580 PASS INDEL;BAVGPOST=0.991;BRSQ=0.941;LDAF=0.0801;AVGPOST=0.9970;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 21746032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.4228;AVGPOST=0.9527;RSQ=0.9370;ERATE=0.0090;THETA=0.0009;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 21746037 . AT A 2041 PASS INDEL;BAVGPOST=0.909;BRSQ=0.686;LDAF=0.1246;AVGPOST=0.9253;RSQ=0.8051;ERATE=0.0006;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 21746040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.1956;AVGPOST=0.9718;RSQ=0.9458;ERATE=0.0042;THETA=0.0004;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 21746041 . T TA 144 PASS INDEL;BAVGPOST=0.995;BRSQ=0.487;LDAF=0.0156;AVGPOST=0.9769;RSQ=0.3975;ERATE=0.0039;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21746063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.836;LDAF=0.0153;AVGPOST=0.9946;RSQ=0.8633;ERATE=0.0006;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21746064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4807;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21746085 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9212;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21746184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6264;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21746228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4872;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21746273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5824;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21746286 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21746356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21746370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0421;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21746459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6213;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 21746493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9400;ERATE=0.0004;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21746522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21746547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6083;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0017;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 21746569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0421;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21746576 . A AACTT 10752 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0389;AVGPOST=0.9989;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21746692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21746732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0015;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21746771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0240;AVGPOST=0.9972;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21746773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21746908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0820;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 21746931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21747118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9994;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21747168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0084;AVGPOST=0.9941;RSQ=0.7244;ERATE=0.0006;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21747180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0599;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21747235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21747267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5011;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 21747384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21747396 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21747418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8414;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 21747421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9889;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21747486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21747507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0824;AVGPOST=0.9983;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 21747531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21747604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21747605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21747652 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8027;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21747677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9103;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21747692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5819;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 21747693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.7033;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21747727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4417;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21747801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5374;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21747887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7160;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21747896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8675;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21747923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1219;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 21747999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0600;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21748011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5566;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5140;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0601;AVGPOST=0.9992;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21748227 rs77635839 AT A 21529 PASS INDEL;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.4598;AVGPOST=0.9776;RSQ=0.9645;ERATE=0.0042;THETA=0.0003;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 21748229 . TA T 64 PASS INDEL;BAVGPOST=0.817;BRSQ=0.138;LDAF=0.1803;AVGPOST=0.7595;RSQ=0.3488;ERATE=0.0112;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 21748236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0044;AVGPOST=0.9969;RSQ=0.7005;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21748292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9529;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21748362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7874;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21748387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9648;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21748416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.4553;AVGPOST=0.9753;RSQ=0.9661;ERATE=0.0011;THETA=0.0051;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 21748592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7735;ERATE=0.0006;THETA=0.0094;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21748608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0107;AVGPOST=0.9961;RSQ=0.8487;ERATE=0.0014;THETA=0.0066;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21748760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8738;ERATE=0.0005;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21748789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8164;ERATE=0.0004;THETA=0.0058;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21748841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0004;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9368;ERATE=0.0003;THETA=0.0082;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21748940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5861;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21748956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0220;AVGPOST=0.9969;RSQ=0.9489;ERATE=0.0005;THETA=0.0150;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21749017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0005;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21749033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9459;ERATE=0.0003;THETA=0.0069;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21749142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21749185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.904;LDAF=0.0403;AVGPOST=0.9957;RSQ=0.9552;ERATE=0.0005;THETA=0.0019;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 21749247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9838;ERATE=0.0004;THETA=0.0044;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21749273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21749389 . AT A 80 PASS INDEL;BAVGPOST=0.979;BRSQ=0.366;LDAF=0.0212;AVGPOST=0.9704;RSQ=0.4302;ERATE=0.0070;THETA=0.0070;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21749437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21749535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5899;ERATE=0.0007;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21749586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0151;AVGPOST=0.9968;RSQ=0.9165;ERATE=0.0004;THETA=0.0021;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21749588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0057;AVGPOST=0.9941;RSQ=0.5622;ERATE=0.0008;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21749651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.659;LDAF=0.1131;AVGPOST=0.9309;RSQ=0.7385;ERATE=0.0008;THETA=0.0053;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 21749685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0037;AVGPOST=0.9959;RSQ=0.5442;ERATE=0.0006;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21749706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.2948;ERATE=0.0009;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21749723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4263;ERATE=0.0005;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21749784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1234;AVGPOST=0.9963;RSQ=0.9874;ERATE=0.0004;THETA=0.0020;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 21749821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.4526;AVGPOST=0.9905;RSQ=0.9850;ERATE=0.0005;THETA=0.0012;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 21749839 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1232;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 21749864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6135;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21749879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9704;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21749905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1229;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0008;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 21750098 . CA C 732 PASS INDEL;BAVGPOST=0.977;BRSQ=0.888;LDAF=0.1126;AVGPOST=0.9851;RSQ=0.9505;ERATE=0.0004;THETA=0.0010;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 21750119 . AAC A 364 PASS INDEL;BAVGPOST=0.975;BRSQ=0.875;LDAF=0.1044;AVGPOST=0.9766;RSQ=0.9165;ERATE=0.0006;THETA=0.0018;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 21750125 rs80264651 AC A 10635 PASS INDEL;BAVGPOST=0.985;BRSQ=0.928;LDAF=0.1141;AVGPOST=0.9872;RSQ=0.9586;ERATE=0.0004;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 21750126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0964;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 21750201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21750477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5636;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 21750478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8379;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21750537 . T TC 247 PASS INDEL;BAVGPOST=0.986;BRSQ=0.676;LDAF=0.0288;AVGPOST=0.9788;RSQ=0.7248;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21750618 . A AT 1087 PASS INDEL;BAVGPOST=0.982;BRSQ=0.783;LDAF=0.0454;AVGPOST=0.9755;RSQ=0.7988;ERATE=0.0010;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21750625 . T TA 855 PASS INDEL;BAVGPOST=0.975;BRSQ=0.707;LDAF=0.0549;AVGPOST=0.9745;RSQ=0.8268;ERATE=0.0011;THETA=0.0008;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 21750628 rs67587342 C CTCTG 87679 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.6999;AVGPOST=0.9913;RSQ=0.9837;ERATE=0.0015;THETA=0.0003;AC=1532;AN=2184 GT:DS:GL:BD 0.70146519 1
1 21750658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21750777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6751;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0006;THETA=0.0009;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 21750816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9129;ERATE=0.0011;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21750991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21751066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21751149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21751219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5906;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21751252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21751278 rs111741516 C CA 500 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21751518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21751609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.1899;AVGPOST=0.9893;RSQ=0.9756;ERATE=0.0004;THETA=0.0002;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 21751651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21751654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7058;AVGPOST=0.9955;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=1545;AN=2184 GT:DS:GL:BD 0.70741761 1
1 21751783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1235;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21751858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752167 . G GT 25623 PASS INDEL;BAVGPOST=0.971;BRSQ=0.938;LDAF=0.6735;AVGPOST=0.9557;RSQ=0.9250;ERATE=0.0101;THETA=0.0003;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 21752266 rs34564751 T TG 86129 PASS INDEL;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.6969;AVGPOST=0.9891;RSQ=0.9800;ERATE=0.0010;THETA=0.0005;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 21752267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5637;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 21752450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.586;LDAF=0.0054;AVGPOST=0.9965;RSQ=0.7383;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21752615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0027;AVGPOST=0.9957;RSQ=0.3678;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21752651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21752819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21753016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1043;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 21753296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6478;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21753448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.508;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5891;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21753502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7574;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21753515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.4194;AVGPOST=0.9836;RSQ=0.9742;ERATE=0.0015;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 21753555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.508;LDAF=0.0101;AVGPOST=0.9916;RSQ=0.6460;ERATE=0.0014;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21753585 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.5669;AVGPOST=0.9930;RSQ=0.9875;ERATE=0.0010;THETA=0.0009;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 21753587 rs36103852 TA T 8216 PASS INDEL;BAVGPOST=0.982;BRSQ=0.931;LDAF=0.1204;AVGPOST=0.9833;RSQ=0.9555;ERATE=0.0003;THETA=0.0014;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 21753798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6256;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21753918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0218;AVGPOST=0.9966;RSQ=0.9462;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21753930 . AC A 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7979;ERATE=0.0002;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21754111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21754171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.947;LDAF=0.1510;AVGPOST=0.9840;RSQ=0.9630;ERATE=0.0004;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 21754223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21754254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4316;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21754308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21754359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7357;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21754411 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.967;LDAF=0.2370;AVGPOST=0.9753;RSQ=0.9634;ERATE=0.0016;THETA=0.0005;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 21754472 . CCTATA C 660 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8628;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21754514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0179;AVGPOST=0.9959;RSQ=0.9146;ERATE=0.0008;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21754681 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9968;RSQ=0.1800;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21754700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7388;ERATE=0.0005;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21754751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8918;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21754773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2773;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21754783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.9172;ERATE=0.0004;THETA=0.0032;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21754927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0107;AVGPOST=0.9965;RSQ=0.8818;ERATE=0.0006;THETA=0.0031;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21755507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8780;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21755517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0164;AVGPOST=0.9973;RSQ=0.9402;ERATE=0.0006;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21755549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9110;ERATE=0.0004;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21755706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.539;LDAF=0.0048;AVGPOST=0.9915;RSQ=0.2860;ERATE=0.0009;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21755856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8561;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21755907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0047;AVGPOST=0.9926;RSQ=0.3420;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21755953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.2633;AVGPOST=0.9728;RSQ=0.9650;ERATE=0.0023;THETA=0.0006;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 21756118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9099;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21756126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0049;AVGPOST=0.9952;RSQ=0.6368;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21756130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.2595;AVGPOST=0.9793;RSQ=0.9735;ERATE=0.0008;THETA=0.0014;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 21756146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.983;LDAF=0.2512;AVGPOST=0.9819;RSQ=0.9753;ERATE=0.0006;THETA=0.0008;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 21756174 . ATT A 1379 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0271;AVGPOST=0.9914;RSQ=0.8874;ERATE=0.0006;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21756184 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.539;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5553;ERATE=0.0006;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21756210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.787;LDAF=0.0304;AVGPOST=0.9802;RSQ=0.7727;ERATE=0.0013;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21756224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.725;LDAF=0.0213;AVGPOST=0.9878;RSQ=0.7902;ERATE=0.0012;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21756225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3696;ERATE=0.0006;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21756291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.559;LDAF=0.0095;AVGPOST=0.9904;RSQ=0.6131;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21756302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.815;LDAF=0.1311;AVGPOST=0.9698;RSQ=0.9173;ERATE=0.0007;THETA=0.0009;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 21757034 . TG T 310 PASS INDEL;BAVGPOST=0.989;BRSQ=0.687;LDAF=0.0188;AVGPOST=0.9928;RSQ=0.8449;ERATE=0.0005;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21757039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0105;AVGPOST=0.9958;RSQ=0.8777;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21757252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0258;AVGPOST=0.9945;RSQ=0.9276;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21757260 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7190;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21757286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6534;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21757288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.955;LDAF=0.2390;AVGPOST=0.9660;RSQ=0.9546;ERATE=0.0009;THETA=0.0014;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 21757507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0069;AVGPOST=0.9956;RSQ=0.7788;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21757666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.840;LDAF=0.1949;AVGPOST=0.9393;RSQ=0.9042;ERATE=0.0004;THETA=0.0011;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 21757696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.846;LDAF=0.2127;AVGPOST=0.9346;RSQ=0.8986;ERATE=0.0008;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 21757777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.7134;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21757835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.959;LDAF=0.2430;AVGPOST=0.9755;RSQ=0.9667;ERATE=0.0008;THETA=0.0004;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 21757865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.954;LDAF=0.2421;AVGPOST=0.9778;RSQ=0.9703;ERATE=0.0004;THETA=0.0008;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 21757919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6880;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21757920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5468;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21757930 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21757945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.637;LDAF=0.0074;AVGPOST=0.9902;RSQ=0.4993;ERATE=0.0007;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21757960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0133;AVGPOST=0.9910;RSQ=0.7407;ERATE=0.0007;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21757974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1204;AVGPOST=0.9788;RSQ=0.9422;ERATE=0.0006;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 21757992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8468;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21758014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.949;LDAF=0.2405;AVGPOST=0.9663;RSQ=0.9548;ERATE=0.0017;THETA=0.0006;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 21758058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0352;AVGPOST=0.9755;RSQ=0.7635;ERATE=0.0009;THETA=0.0011;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21758119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.917;LDAF=0.2411;AVGPOST=0.9527;RSQ=0.9320;ERATE=0.0024;THETA=0.0011;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 21758196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.899;LDAF=0.1132;AVGPOST=0.9731;RSQ=0.9281;ERATE=0.0011;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 21758197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0064;AVGPOST=0.9896;RSQ=0.3838;ERATE=0.0008;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21758315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.917;LDAF=0.2540;AVGPOST=0.9675;RSQ=0.9562;ERATE=0.0007;THETA=0.0008;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 21758379 rs61252631 T TTTATTTCC 2080 PASS INDEL;BAVGPOST=0.991;BRSQ=0.861;LDAF=0.0253;AVGPOST=0.9940;RSQ=0.9180;ERATE=0.0005;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21758395 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5449;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21758466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4676;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21758485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21758652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21758752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0667;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21758787 . T TTTTTTC 575 PASS INDEL;BAVGPOST=0.991;BRSQ=0.625;LDAF=0.0111;AVGPOST=0.9911;RSQ=0.6925;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21758793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0668;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21758889 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21759055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.6252;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21759066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21759099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21759158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0401;AVGPOST=0.9980;RSQ=0.9799;ERATE=0.0002;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 21759175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2825;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0003;THETA=0.0029;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 21759182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9392;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21759324 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21759424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2286;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 21759440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4886;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 21759477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4886;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 21759481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8537;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21759556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9716;ERATE=0.0003;THETA=0.0040;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21759582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21759613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2762;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 21759680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7308;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21759781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21759832 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4284;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21759839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6688;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21759921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5395;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21760040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21760086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9497;ERATE=0.0002;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21760125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5450;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21760396 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21760457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21760491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0156;AVGPOST=0.9987;RSQ=0.9662;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21760534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5486;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21760555 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0596;AVGPOST=0.9986;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21760650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4167;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21760665 . GT G 3047 PASS INDEL;BAVGPOST=0.944;BRSQ=0.882;LDAF=0.2325;AVGPOST=0.9339;RSQ=0.8821;ERATE=0.0071;THETA=0.0005;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 21760746 . TTG T 9603 PASS INDEL;BAVGPOST=0.964;BRSQ=0.924;LDAF=0.2506;AVGPOST=0.9748;RSQ=0.9562;ERATE=0.0004;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 21760753 rs58780625 TG T 29473 PASS INDEL;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.2699;AVGPOST=0.9692;RSQ=0.9492;ERATE=0.0048;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 21760754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1850;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21760857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1864;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0006;THETA=0.0001;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 21760876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2068;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0018;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 21760914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1855;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21760917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21760927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21761015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5996;ERATE=0.0002;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21761031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9144;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21761048 . A AT 153 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8321;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21761064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0673;AVGPOST=0.9985;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21761197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21761461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.833;LDAF=0.0090;AVGPOST=0.9963;RSQ=0.8606;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21761544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21761560 . C CA 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0075;AVGPOST=0.9930;RSQ=0.6016;ERATE=0.0014;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21761561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4815;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21761739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21761777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1852;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21761778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21761780 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21761943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1851;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21761952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9266;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21761965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0206;AVGPOST=0.9991;RSQ=0.9834;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21762086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6732;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21762175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9390;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21762198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21762257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5183;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21762341 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1851;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 21762381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7234;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21762434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21762451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21762470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1518;AVGPOST=0.9976;RSQ=0.9923;ERATE=0.0002;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 21762597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0078;AVGPOST=0.9972;RSQ=0.8793;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21762598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1862;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 21762880 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21762889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7042;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21762965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9510;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21763188 . T TACA 146 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7946;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21763257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9460;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21763277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21763354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21763364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21763423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5029;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21763452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7882;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21763486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21763488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21763547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0833;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0002;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 21763617 . CCTGG C 586 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0052;AVGPOST=0.9969;RSQ=0.7624;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21763662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21763682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.921;LDAF=0.7119;AVGPOST=0.9489;RSQ=0.9094;ERATE=0.0052;THETA=0.0008;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 21763756 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0139;AVGPOST=0.9991;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21764108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0230;AVGPOST=0.9985;RSQ=0.9743;ERATE=0.0004;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21764236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6729;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21764329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.958;LDAF=0.1893;AVGPOST=0.9866;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 21764352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6970;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21764418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7798;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21764488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7836;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 21764567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21764623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.943;LDAF=0.7205;AVGPOST=0.9719;RSQ=0.9474;ERATE=0.0025;THETA=0.0003;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 21764905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.941;LDAF=0.7214;AVGPOST=0.9750;RSQ=0.9544;ERATE=0.0017;THETA=0.0007;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 21764906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21764945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0343;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21764951 rs34103918 C CT 2003 PASS INDEL;BAVGPOST=0.584;BRSQ=0.219;LDAF=0.5525;AVGPOST=0.6369;RSQ=0.3294;ERATE=0.0508;THETA=0.0004;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 21765264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.8072;AVGPOST=0.9966;RSQ=0.9904;ERATE=0.0007;THETA=0.0003;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 21765339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6448;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21765523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6069;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21765562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6644;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21765673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7959;AVGPOST=0.9968;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 21765867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21765887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21765972 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21766007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.1846;AVGPOST=0.9869;RSQ=0.9676;ERATE=0.0004;THETA=0.0005;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 21766136 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6482;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21766138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21766245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6715;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21766278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21766391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.594;LDAF=0.0150;AVGPOST=0.9843;RSQ=0.6033;ERATE=0.0026;THETA=0.0031;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21766449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7501;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21766693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.797;LDAF=0.0212;AVGPOST=0.9923;RSQ=0.8861;ERATE=0.0002;THETA=0.0013;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21766699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.763;LDAF=0.0075;AVGPOST=0.9964;RSQ=0.8006;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21766745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21766786 . GATAA G 493 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21766828 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0123;AVGPOST=0.9973;RSQ=0.9289;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21766832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9357;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21766846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8960;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21766866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7639;AVGPOST=0.9920;RSQ=0.9829;ERATE=0.0004;THETA=0.0007;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 21766918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8268;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21766934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5411;ERATE=0.0004;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21767044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3959;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21767194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4762;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21767196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21767352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9758;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21767438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8800;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21767441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0002;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21767442 . T TTG 266 PASS INDEL;BAVGPOST=0.992;BRSQ=0.424;LDAF=0.0089;AVGPOST=0.9885;RSQ=0.4679;ERATE=0.0013;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21767620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.924;LDAF=0.3744;AVGPOST=0.9705;RSQ=0.9552;ERATE=0.0006;THETA=0.0085;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 21767679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.949;LDAF=0.1210;AVGPOST=0.9823;RSQ=0.9337;ERATE=0.0020;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 21767832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0151;AVGPOST=0.9953;RSQ=0.8734;ERATE=0.0003;THETA=0.0058;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21767909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0150;AVGPOST=0.9957;RSQ=0.8827;ERATE=0.0004;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21767913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4851;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21767962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8610;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21768040 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0287;AVGPOST=0.9983;RSQ=0.9773;ERATE=0.0003;THETA=0.0051;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21768060 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.957;LDAF=0.8581;AVGPOST=0.9834;RSQ=0.9514;ERATE=0.0032;THETA=0.0023;AC=1875;AN=2184 GT:DS:GL:BD 0.85851645 1
1 21768152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.1930;AVGPOST=0.9869;RSQ=0.9694;ERATE=0.0019;THETA=0.0054;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 21768175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9749;ERATE=0.0003;THETA=0.0051;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21768400 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0002;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21768449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21768455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9442;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21768772 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21768851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9199;ERATE=0.0006;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21768947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21768956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0269;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21769063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3320;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 21769103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8504;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21769230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21769389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2795;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 21769395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2737;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0006;THETA=0.0004;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 21769445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0936;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 21769468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21769486 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21769564 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21769576 . GC G 860 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21769686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21769783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0179;AVGPOST=0.9986;RSQ=0.9679;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21769788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21769934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2787;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 21769935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9380;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21769987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8237;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21770128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21770173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0270;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 21770211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9307;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21770276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21770287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21770338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770351 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2790;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 21770554 . TAC T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21770636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9249;ERATE=0.0005;THETA=0.0072;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21770856 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21770924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9045;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21770930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6610;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21770938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21771025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8194;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21771031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21771138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21771176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21771315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21771329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4525;AVGPOST=0.9999;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 21771335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21771446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21771525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0065;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 21771583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21771679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21771784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21771802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0212;AVGPOST=0.9960;RSQ=0.9219;ERATE=0.0004;THETA=0.0040;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21771944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6607;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21771974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0238;AVGPOST=0.9988;RSQ=0.9795;ERATE=0.0004;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21772004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0138;AVGPOST=0.9971;RSQ=0.9167;ERATE=0.0006;THETA=0.0030;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21772013 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21772071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21772132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21772301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0120;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 21772376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21772383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9081;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21772399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0042;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21772477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0003;THETA=0.0020;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21772555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8553;AVGPOST=0.9967;RSQ=0.9896;ERATE=0.0004;THETA=0.0072;AC=1868;AN=2184 GT:DS:GL:BD 0.85531133 1
1 21772664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5360;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 21772804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21772898 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9379;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21772909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9544;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21772921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21773010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21773055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21773091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2627;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 21773157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21773308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5076;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21773389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21773391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2758;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 21773438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9443;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21773470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0142;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21773481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6043;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21773626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21773779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8646;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21773799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21773852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1936;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 21773907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21774105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21774133 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21774154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9710;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21774155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21774187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21774217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21774230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21774264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21774265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21774412 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21774415 . G GA 2945 PASS INDEL;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0431;AVGPOST=0.9865;RSQ=0.8726;ERATE=0.0018;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 21774552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21774626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1623;ERATE=0.0002;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21774641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0048;AVGPOST=0.9976;RSQ=0.8106;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21774743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5596;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21774823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.2152;AVGPOST=0.9942;RSQ=0.9867;ERATE=0.0007;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 21774921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2897;AVGPOST=0.9947;RSQ=0.9918;ERATE=0.0006;THETA=0.0005;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 21774958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5314;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21775053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2896;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0007;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 21775064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0596;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 21775289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9737;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21775312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21775313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2926;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 21775358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21775386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6704;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21775431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21775463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6376;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 21775489 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2912;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 21775589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6284;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21775675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8703;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21775711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0577;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 21775740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3477;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0006;THETA=0.0003;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 21775762 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2003;AVGPOST=0.9978;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 21775840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2924;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 21775851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0981;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 21775852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0340;AVGPOST=0.9990;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21775862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8052;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21775874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21775928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21776007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2930;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 21776014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21776083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21776231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0685;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0002;THETA=0.0007;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 21776323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21776484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21776508 . AC A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5598;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21776606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8736;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21776624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.5041;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21776673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7448;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21776704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2921;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 21776713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2929;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 21776782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6981;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21776790 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7388;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21776798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8986;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21776932 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21777118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6399;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 21777150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21777205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8861;ERATE=0.0003;THETA=0.0051;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21777220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3480;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 21777239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6806;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21777328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0005;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21777346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21777353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21777377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8789;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21777427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.9202;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21777563 . CCT C 132 PASS INDEL;BAVGPOST=0.984;BRSQ=0.673;LDAF=0.0433;AVGPOST=0.9518;RSQ=0.5519;ERATE=0.0123;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21777615 . G GTC 200 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6012;ERATE=0.0016;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21777630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21777687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21777728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21777942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21777991 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21778084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21778133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21778138 rs3052169 GTA G 4607 PASS INDEL;BAVGPOST=0.983;BRSQ=0.875;LDAF=0.0809;AVGPOST=0.9577;RSQ=0.7971;ERATE=0.0054;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 21778228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21778357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21778371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9160;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21778420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6407;AVGPOST=0.9966;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=1398;AN=2184 GT:DS:GL:BD 0.64010990 1
1 21778427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0482;AVGPOST=0.9985;RSQ=0.9871;ERATE=0.0005;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21778524 . CG C 938 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0220;AVGPOST=0.9979;RSQ=0.9578;ERATE=0.0006;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21778625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.912;LDAF=0.0584;AVGPOST=0.9967;RSQ=0.9796;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 21778642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0087;AVGPOST=0.9983;RSQ=0.9076;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21778712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4213;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21778826 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8721;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21778883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7825;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21778940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.549;LDAF=0.1140;AVGPOST=0.8698;RSQ=0.5067;ERATE=0.0194;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 21779193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.793;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21779310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0683;AVGPOST=0.9945;RSQ=0.9670;ERATE=0.0007;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21779354 . TAATA T 6765 PASS INDEL;BAVGPOST=0.765;BRSQ=0.562;LDAF=0.4282;AVGPOST=0.7267;RSQ=0.5274;ERATE=0.0734;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 21779415 . C CG 418 PASS INDEL;BAVGPOST=0.995;BRSQ=0.604;LDAF=0.0086;AVGPOST=0.9924;RSQ=0.6560;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21779477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9137;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21779643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1461;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0008;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 21779670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7826;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21779693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7674;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21779702 . CA C 10722 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1247;AVGPOST=0.9970;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 21779751 . GATTTATTT G 1611 PASS INDEL;BAVGPOST=0.995;BRSQ=0.843;LDAF=0.0179;AVGPOST=0.9973;RSQ=0.9436;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21779824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21779859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8429;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21779868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21779980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.788;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21780034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21780035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21780086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0210;AVGPOST=0.9963;RSQ=0.9311;ERATE=0.0005;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21780087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8918;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21780128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7552;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21780132 . C CTATT 3223 PASS INDEL;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0187;AVGPOST=0.9979;RSQ=0.9538;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21780134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9978;RSQ=0.8890;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21780222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0072;AVGPOST=0.9980;RSQ=0.8820;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21780234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1450;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 21780238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21780286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5264;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21780354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5167;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21780377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5298;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21780408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9576;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21780434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4814;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21780437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21780573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21780576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3184;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 21780698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3162;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 21780833 . CA C 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7164;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21780858 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0117;AVGPOST=0.9976;RSQ=0.9257;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21780922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3396;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0007;THETA=0.0004;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 21781012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21781317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0178;AVGPOST=0.9987;RSQ=0.9725;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21781330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21781348 . TC T 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21781355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21781377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7568;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21781426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21781611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1190;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 21781672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21781682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21781722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6778;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21781746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6039;AVGPOST=0.9946;RSQ=0.9920;ERATE=0.0004;THETA=0.0009;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 21781952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21781954 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21781967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0091;AVGPOST=0.9964;RSQ=0.8406;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21781987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7625;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21782020 . C CT 2243 PASS INDEL;BAVGPOST=0.576;BRSQ=0.274;LDAF=0.5697;AVGPOST=0.6910;RSQ=0.5007;ERATE=0.0253;THETA=0.0012;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 21782092 . T TTA 344 PASS INDEL;BAVGPOST=0.990;BRSQ=0.731;LDAF=0.0196;AVGPOST=0.9887;RSQ=0.8017;ERATE=0.0007;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 21782316 . TTA T 4277 PASS INDEL;BAVGPOST=0.865;BRSQ=0.735;LDAF=0.2914;AVGPOST=0.8489;RSQ=0.7407;ERATE=0.0220;THETA=0.0005;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 21782319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7754;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21782343 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21782457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21782509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0216;AVGPOST=0.9986;RSQ=0.9750;ERATE=0.0003;THETA=0.0150;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21782549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0540;AVGPOST=0.9960;RSQ=0.9734;ERATE=0.0007;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 21783179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21783390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8616;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21783399 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21783489 . GA G 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.453;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.2919;ERATE=0.0006;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21783534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0045;AVGPOST=0.9953;RSQ=0.6354;ERATE=0.0005;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21783585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1119;AVGPOST=0.9873;RSQ=0.9498;ERATE=0.0026;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 21783640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7896;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21783750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21783779 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4077;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21783866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0106;AVGPOST=0.9919;RSQ=0.7041;ERATE=0.0009;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21784098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0532;AVGPOST=0.9936;RSQ=0.9487;ERATE=0.0006;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 21784150 . TATATA T 55 PASS INDEL;BAVGPOST=0.999;BRSQ=0.427;LDAF=0.0200;AVGPOST=0.9745;RSQ=0.4769;ERATE=0.0025;THETA=0.0022;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21784175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.576;LDAF=0.0284;AVGPOST=0.9857;RSQ=0.7978;ERATE=0.0011;THETA=0.0027;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 21784213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.389;LDAF=0.0184;AVGPOST=0.9745;RSQ=0.4410;ERATE=0.0031;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21784214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5118;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21784309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9703;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21784563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.4941;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21784658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5678;AVGPOST=0.9936;RSQ=0.9891;ERATE=0.0009;THETA=0.0006;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 21784684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0159;AVGPOST=0.9988;RSQ=0.9740;ERATE=0.0003;THETA=0.0027;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21784762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21784765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21784766 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.610;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7040;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21784778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21784906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7418;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21785108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21785166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21785250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6763;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21785311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21785316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0764;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 21785321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9985;RSQ=0.9648;ERATE=0.0003;THETA=0.0013;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 21785330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21785359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8389;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21785430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1379;AVGPOST=0.9979;RSQ=0.9933;ERATE=0.0007;THETA=0.0003;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 21785545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21785582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6128;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 21785589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21785609 . G GT 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6768;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21785669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8041;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21785712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21785745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21785797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21785847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0155;AVGPOST=0.9936;RSQ=0.8286;ERATE=0.0006;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21785887 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6078;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1328;AN=2184 GT:DS:GL:BD 0.60805863 1
1 21785927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21785934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21786022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21786088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8409;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21786117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6348;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21786185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21786299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8030;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21786336 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8475;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21786378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6315;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21786422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21786488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4612;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 21786501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2440;AVGPOST=0.9915;RSQ=0.9836;ERATE=0.0005;THETA=0.0016;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 21786562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21786689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21786710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6335;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21786735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0090;AVGPOST=0.9982;RSQ=0.9157;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21786779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6813;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21786860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0190;AVGPOST=0.9968;RSQ=0.9359;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21786924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.591;LDAF=0.0084;AVGPOST=0.9904;RSQ=0.5449;ERATE=0.0013;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21786983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21787091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0846;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 21787111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8660;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21787167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7129;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21787257 . T TA 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21787462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.982;LDAF=0.5536;AVGPOST=0.9791;RSQ=0.9745;ERATE=0.0006;THETA=0.0003;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 21787579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4684;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21787600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9384;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21787724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6656;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21787754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8999;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21787853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6819;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21787877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21787977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21787993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6066;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21788023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21788103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0818;AVGPOST=0.9970;RSQ=0.9839;ERATE=0.0004;THETA=0.0031;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 21788192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8723;ERATE=0.0006;THETA=0.0029;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21788591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5636;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21788618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21788737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.991;LDAF=0.4172;AVGPOST=0.9917;RSQ=0.9894;ERATE=0.0006;THETA=0.0012;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 21788896 . G GT 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4385;ERATE=0.0005;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21789086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0068;AVGPOST=0.9977;RSQ=0.8640;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21789112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9597;ERATE=0.0003;THETA=0.0037;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21789124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8675;ERATE=0.0004;THETA=0.0078;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21789125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21789233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21789246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0137;AVGPOST=0.9954;RSQ=0.8979;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21789453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21789479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7299;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21789567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21789780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21789804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9435;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21789836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.2844;AVGPOST=0.9776;RSQ=0.9637;ERATE=0.0093;THETA=0.0122;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 21789838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6136;ERATE=0.0003;THETA=0.0314;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21789927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7208;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21789954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.901;LDAF=0.0277;AVGPOST=0.9916;RSQ=0.8942;ERATE=0.0039;THETA=0.0088;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21790041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.8914;AVGPOST=0.9918;RSQ=0.9688;ERATE=0.0010;THETA=0.0138;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 21790209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.8291;AVGPOST=0.9885;RSQ=0.9669;ERATE=0.0027;THETA=0.0025;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 21790257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1919;AVGPOST=0.9916;RSQ=0.9811;ERATE=0.0005;THETA=0.0006;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 21790288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0442;AVGPOST=0.9970;RSQ=0.9689;ERATE=0.0003;THETA=0.0023;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21790359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6260;ERATE=0.0004;THETA=0.0077;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21790362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7849;ERATE=0.0004;THETA=0.0085;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21790494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9462;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21790604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7593;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21790605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5214;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21790680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0799;AVGPOST=0.9924;RSQ=0.9593;ERATE=0.0005;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 21790969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0132;AVGPOST=0.9974;RSQ=0.9256;ERATE=0.0004;THETA=0.0024;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21791080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.644;LDAF=0.0072;AVGPOST=0.9945;RSQ=0.6644;ERATE=0.0009;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21791314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.773;LDAF=0.0088;AVGPOST=0.9934;RSQ=0.7016;ERATE=0.0006;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21791391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.9107;AVGPOST=0.9921;RSQ=0.9615;ERATE=0.0009;THETA=0.0008;AC=1991;AN=2184 GT:DS:GL:BD 0.91163003 1
1 21791438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8888;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21791445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4757;ERATE=0.0006;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21791474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9127;AVGPOST=0.9956;RSQ=0.9795;ERATE=0.0005;THETA=0.0007;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 21791492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6922;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21791496 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7430;ERATE=0.0005;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21791577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21791581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6794;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21791630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21791849 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8911;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21791960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8606;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21791975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.670;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21792011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3328;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21792105 . AC A 783 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8941;ERATE=0.0003;THETA=0.0040;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21792141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6447;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21792179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21792401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21792563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21792633 . TA T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4668;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21792713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6878;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21792898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8640;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21792987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21793037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21793100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8685;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21793102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21793159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21793160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21793166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8788;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21793234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5070;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21793282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8674;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21793533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21793765 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21793806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7399;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21793835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21793921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21793925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5882;AVGPOST=0.9955;RSQ=0.9924;ERATE=0.0006;THETA=0.0005;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 21793955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2529;AVGPOST=0.9903;RSQ=0.9828;ERATE=0.0027;THETA=0.0007;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 21794041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7821;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21794189 . CTAAA C 379 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9380;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21794398 rs60759461 TAAATA T 1743 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0110;AVGPOST=0.9968;RSQ=0.8931;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21794399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8349;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21794464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8239;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21794486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9020;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21794535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21794550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3110;AVGPOST=0.9941;RSQ=0.9901;ERATE=0.0007;THETA=0.0003;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 21794651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8574;ERATE=0.0011;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21794748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8912;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21794752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21794789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7769;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21794976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21795000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21795060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21795081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7363;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21795093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21795107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21795186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21795196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21795198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21795381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5995;AVGPOST=0.9964;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 21795385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21795483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.900;LDAF=0.0248;AVGPOST=0.9959;RSQ=0.9341;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21795494 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21795554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9124;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21795740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8510;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21795829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6276;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21795844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8037;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21795862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0221;AVGPOST=0.9984;RSQ=0.9740;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21795868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5308;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21795897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.696;LDAF=0.0440;AVGPOST=0.9659;RSQ=0.6823;ERATE=0.0084;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 21795898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2108;AVGPOST=0.9901;RSQ=0.9778;ERATE=0.0008;THETA=0.0004;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 21796015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21796066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9595;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21796067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6809;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21796118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21796130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9519;ERATE=0.0002;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21796268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21796297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21796333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7028;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21796514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3587;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21796719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5229;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21796721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21796863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21796884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0002;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21796943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5625;AVGPOST=0.9953;RSQ=0.9925;ERATE=0.0004;THETA=0.0007;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 21796988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.2861;AVGPOST=0.9933;RSQ=0.9874;ERATE=0.0007;THETA=0.0010;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 21797130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21797132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2910;AVGPOST=0.9909;RSQ=0.9835;ERATE=0.0004;THETA=0.0029;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 21797153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21797180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8653;ERATE=0.0004;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21797201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5973;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21797220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2298;AVGPOST=0.9898;RSQ=0.9788;ERATE=0.0004;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 21797241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7507;ERATE=0.0004;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21797280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0236;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0047;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21797404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0002;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21797479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21797565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21797595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8103;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21797611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21797626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21797627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7861;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21797685 . T TA 417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21797773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5903;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21797776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21797790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9264;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21797804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4103;AVGPOST=0.9917;RSQ=0.9884;ERATE=0.0010;THETA=0.0004;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 21797922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21797947 . G GCTCTTA 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9004;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21798052 . TC T 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7344;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21798165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9558;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21798226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9592;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21798446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7470;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21798449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8697;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21798464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21798552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21798701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21798785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21798850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0264;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21798891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21798892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0226;AVGPOST=0.9989;RSQ=0.9782;ERATE=0.0003;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21798913 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 21798947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21798973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.815;LDAF=0.2124;AVGPOST=0.9300;RSQ=0.8434;ERATE=0.0029;THETA=0.0005;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 21799059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0305;AVGPOST=0.9991;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21799263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0253;AVGPOST=0.9987;RSQ=0.9825;ERATE=0.0003;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21799280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21799281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0004;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21799296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5528;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21799314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.529;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8198;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21799334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0462;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0004;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 21799401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0809;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 21799520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21799651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8489;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21799663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7856;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21799665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21799758 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9603;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21799842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21799944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0344;AVGPOST=0.9992;RSQ=0.9907;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 21800002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7072;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21800003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21800078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6644;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21800085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21800228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.451;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5338;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21800287 . A AAG 315 PASS INDEL;BAVGPOST=0.987;BRSQ=0.582;LDAF=0.0210;AVGPOST=0.9814;RSQ=0.6868;ERATE=0.0028;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21800311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6877;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21800321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21800373 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21800374 . CAG C 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21800399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9966;RSQ=0.9589;ERATE=0.0004;THETA=0.0028;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 21800490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.721;LDAF=0.0575;AVGPOST=0.9823;RSQ=0.8902;ERATE=0.0009;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21800554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.3879;AVGPOST=0.9656;RSQ=0.9503;ERATE=0.0054;THETA=0.0003;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 21800614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9051;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21800697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.7627;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21800908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1924;AVGPOST=0.9928;RSQ=0.9825;ERATE=0.0004;THETA=0.0006;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 21800949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1928;AVGPOST=0.9927;RSQ=0.9824;ERATE=0.0004;THETA=0.0003;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 21800968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21800970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21801008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0302;AVGPOST=0.9964;RSQ=0.9560;ERATE=0.0005;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21801051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21801105 . CAT C 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5213;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21801114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9422;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21801179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21801536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7275;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21801564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7362;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21801618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.9033;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21801703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.750;LDAF=0.0071;AVGPOST=0.9960;RSQ=0.7523;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21801975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7331;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21802003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8527;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21802050 . G GT 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21802060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0092;AVGPOST=0.9964;RSQ=0.8323;ERATE=0.0007;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21802124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8474;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21802153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0291;AVGPOST=0.9960;RSQ=0.9402;ERATE=0.0006;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 21802301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7159;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21802379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21802400 . C CTA 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5953;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21802571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9780;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21802627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0154;AVGPOST=0.9988;RSQ=0.9701;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21802670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7144;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21802746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0438;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 21802967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1086;AVGPOST=0.9962;RSQ=0.9849;ERATE=0.0006;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 21802981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21802987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0071;AVGPOST=0.9981;RSQ=0.9071;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21803010 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9319;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21803205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3087;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 21803256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21803269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21803304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8601;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21803468 . G GT 110 PASS INDEL;BAVGPOST=0.996;BRSQ=0.497;LDAF=0.0071;AVGPOST=0.9923;RSQ=0.5895;ERATE=0.0010;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21803495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5801;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21803496 . AAC A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21803559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8580;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21803605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6888;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21803615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0105;AVGPOST=0.9962;RSQ=0.8538;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21803632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21803834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9247;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21803855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21804074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.4097;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21804149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21804202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7629;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21804365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21804374 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7143;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21804392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0267;AVGPOST=0.9990;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21804408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21804460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8997;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21804552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21804716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21804761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7705;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21804798 . AAC A 109 PASS INDEL;BAVGPOST=0.992;BRSQ=0.668;LDAF=0.0218;AVGPOST=0.9767;RSQ=0.5793;ERATE=0.0076;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21804843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21804883 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21804965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0446;AVGPOST=0.9993;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21804976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21805217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21805414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6124;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0007;THETA=0.0006;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 21805705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5319;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21805913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0100;AVGPOST=0.9945;RSQ=0.7745;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21805968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0864;AVGPOST=0.9977;RSQ=0.9901;ERATE=0.0004;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 21806011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21806067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9484;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21806094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5197;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21806220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21806239 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21806254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21806410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6316;AVGPOST=0.9931;RSQ=0.9890;ERATE=0.0020;THETA=0.0004;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 21806498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8847;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21806536 . GAATTCTTGATACAGA G 900 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8903;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21806538 rs58687931 T TG 1853 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9985;RSQ=0.9665;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21806684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9372;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21806702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21806706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3988;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21806876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21807094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21807163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8371;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21807259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21807288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21807366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6986;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21807394 . A AT 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4837;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21807566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9121;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21807637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.8006;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21807639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21807681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21807787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21807801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21807849 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21807851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21807888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7490;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21807909 . GT G 457 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21807929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6474;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21807942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6598;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21807944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8970;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21807984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1354;AVGPOST=0.9965;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 21807989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5872;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21808065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7461;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21808195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5036;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21808224 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5053;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21808229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5177;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0002;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 21808280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21808295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6641;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21808373 rs60694784 A ACACAGGGCCCCAAGTC 32046 PASS INDEL;BAVGPOST=0.808;BRSQ=0.674;LDAF=0.4138;AVGPOST=0.7479;RSQ=0.6150;ERATE=0.0447;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 21808646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1391;AVGPOST=0.9968;RSQ=0.9895;ERATE=0.0006;THETA=0.0002;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 21808793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6351;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21808794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6220;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21808876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.5063;AVGPOST=0.9840;RSQ=0.9751;ERATE=0.0055;THETA=0.0003;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 21808906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3738;AVGPOST=0.9960;RSQ=0.9929;ERATE=0.0008;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 21808973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9099;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21808988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21809024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9593;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21809181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21809212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8308;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21809225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21809299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21809314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6068;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21809500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9033;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21809540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0071;AVGPOST=0.9970;RSQ=0.8446;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21809589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21809719 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5165;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0007;THETA=0.0006;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 21809797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5165;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 21809823 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21809852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21809939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21809959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5162;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 21809988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5175;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 21809992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5166;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5175;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0007;THETA=0.0003;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 21810107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21810126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8708;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21810197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8252;ERATE=0.0013;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21810245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4161;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0018;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21810336 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21810350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21810489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810578 . TTCTG T 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8587;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21810640 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21810656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21810955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21811032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5178;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 21811073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8600;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21811101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21811243 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5169;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 21811281 rs67159232 TCTTCCC T 61873 PASS INDEL;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5031;AVGPOST=0.9622;RSQ=0.9440;ERATE=0.0151;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 21811413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21811494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5320;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 21811565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21811576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21811589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8536;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 21811723 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7540;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21811833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9217;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21811854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21811892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8539;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 21811948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8901;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21812033 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21812064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.6023;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21812142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.8008;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21812157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9247;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21812271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21812281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8144;AVGPOST=0.9958;RSQ=0.9891;ERATE=0.0010;THETA=0.0003;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 21812352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7018;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21812358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.950;LDAF=0.4963;AVGPOST=0.9522;RSQ=0.9242;ERATE=0.0096;THETA=0.0002;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 21812393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6194;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21812440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 21812460 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5155;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0006;THETA=0.0005;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 21812497 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6094;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21812607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.725;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8141;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21812719 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21812730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21812763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5705;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21812765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0122;AVGPOST=0.9979;RSQ=0.9235;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 21812841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21812879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8244;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21812897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7879;ERATE=0.0004;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21812899 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21812930 . CTATT C 3923 PASS INDEL;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0261;AVGPOST=0.9964;RSQ=0.9519;ERATE=0.0004;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21812949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2047;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0015;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 21812994 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21813005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21813348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0057;AVGPOST=0.9969;RSQ=0.7874;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21813373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5092;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21813387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5117;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21813430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9562;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21813454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21813481 . C CG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21813540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21813586 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21813605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21813884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5147;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21813919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=0.9981;RSQ=0.9642;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 21813934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0164;AVGPOST=0.9981;RSQ=0.9529;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21814046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8046;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21814100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9057;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21814155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6322;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21814191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0106;AVGPOST=0.9966;RSQ=0.8841;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21814357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9990;RSQ=0.9879;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21814391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8014;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21814497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21814531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9986;RSQ=0.2488;ERATE=0.0005;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21814629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8303;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21814664 . CT C 264 PASS INDEL;BAVGPOST=0.754;BRSQ=0.363;LDAF=0.3079;AVGPOST=0.6867;RSQ=0.3730;ERATE=0.0447;THETA=0.0012;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 21814674 . G GC 113 PASS INDEL;BAVGPOST=0.978;BRSQ=0.295;LDAF=0.0524;AVGPOST=0.9388;RSQ=0.5228;ERATE=0.0031;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21814713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.583;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6498;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21814718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0079;AVGPOST=0.9973;RSQ=0.8429;ERATE=0.0007;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21815000 . C CA 746 PASS INDEL;BAVGPOST=0.986;BRSQ=0.667;LDAF=0.0400;AVGPOST=0.9597;RSQ=0.5869;ERATE=0.0098;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21815146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21815150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9755;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21815242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8244;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21815305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21815312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9645;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21815477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7316;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21815591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21815619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9016;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21815704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21815725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21815728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21815900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7348;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21816120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21816184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8109;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21816251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3210;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0003;THETA=0.0008;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 21816277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21816328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21816345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8622;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21816529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9556;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21816530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5309;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21816542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5581;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21816659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21816902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21817379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21817380 . GT G 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7939;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21817458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21817510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3540;AVGPOST=0.9956;RSQ=0.9929;ERATE=0.0010;THETA=0.0006;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 21817677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6847;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21817687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1207;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 21817701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21817758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1027;AVGPOST=0.9985;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 21817819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5195;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0008;THETA=0.0010;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21817972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8544;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21818000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5618;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21818012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0143;AVGPOST=0.9980;RSQ=0.9443;ERATE=0.0006;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21818084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8395;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21818109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.687;LDAF=0.0075;AVGPOST=0.9911;RSQ=0.5223;ERATE=0.0010;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21818115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0260;AVGPOST=0.9958;RSQ=0.9400;ERATE=0.0008;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 21818149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21818197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5200;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21818253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0105;AVGPOST=0.9975;RSQ=0.9021;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21818308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.5258;AVGPOST=0.9711;RSQ=0.9552;ERATE=0.0054;THETA=0.0004;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 21818495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6572;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21818629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21818762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9241;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21818850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8564;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21818874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9525;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21818996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5202;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21819003 . T TA 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819046 . GAA G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0319;AVGPOST=0.9956;RSQ=0.9442;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21819370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21819379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5200;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21819387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3612;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 21819406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5199;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21819499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21819564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5202;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21819630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21819651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21819752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21819814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9448;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21819818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3995;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 21819965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1215;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 21820027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21820293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3566;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0007;THETA=0.0006;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 21820418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5884;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21820423 rs34472239 AC A 7356 PASS INDEL;BAVGPOST=0.988;BRSQ=0.943;LDAF=0.1110;AVGPOST=0.9886;RSQ=0.9570;ERATE=0.0004;THETA=0.0003;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 21820451 . TG T 567 PASS INDEL;BAVGPOST=0.983;BRSQ=0.920;LDAF=0.1086;AVGPOST=0.9867;RSQ=0.9496;ERATE=0.0004;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 21820454 . G GTAT 14938 PASS INDEL;BAVGPOST=0.987;BRSQ=0.940;LDAF=0.1149;AVGPOST=0.9850;RSQ=0.9473;ERATE=0.0006;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 21820455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3602;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 21820470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5678;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21820719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21820788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5260;AVGPOST=0.9935;RSQ=0.9896;ERATE=0.0011;THETA=0.0007;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 21820886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21820977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5199;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0007;THETA=0.0006;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21821016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9713;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21821185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0179;AVGPOST=0.9979;RSQ=0.9468;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21821221 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9155;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21821389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21821521 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 21821584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21821618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5198;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0008;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 21821631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6611;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21821670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1215;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0005;THETA=0.0005;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21821693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21821785 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21821894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21821920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0225;AVGPOST=0.9979;RSQ=0.9599;ERATE=0.0007;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 21822075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21822202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9374;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21822318 . CTTGT C 690 PASS INDEL;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7914;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21822382 . G GT 642 PASS INDEL;BAVGPOST=0.951;BRSQ=0.600;LDAF=0.0987;AVGPOST=0.9014;RSQ=0.5305;ERATE=0.0332;THETA=0.0039;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 21822557 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6192;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21822652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8127;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21822663 . A AT 370 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8627;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21822778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 21822844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1117;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 21822913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8825;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21823165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21823228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21823231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21823235 . T TC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21823248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5962;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21823318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21823381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21823425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0272;AVGPOST=0.9974;RSQ=0.9660;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21823477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3184;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0005;THETA=0.0008;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 21823558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8605;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21823600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0099;AVGPOST=0.9941;RSQ=0.7760;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21823683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0074;AVGPOST=0.9967;RSQ=0.8137;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21823730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7239;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21823882 . AT A 865 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9600;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21823904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21823995 . CAG C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6790;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21824054 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21824213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0351;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 21824221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.862;LDAF=0.0262;AVGPOST=0.9860;RSQ=0.7815;ERATE=0.0101;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21824232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9599;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21824388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9381;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21824401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9373;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21824506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1121;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 21824621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21824817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0965;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 21824822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21824966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0592;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 21825008 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0004;THETA=0.0043;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21825163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8853;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21825180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21825183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8983;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21825191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9523;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21825272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6947;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21825276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21825312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5625;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0006;THETA=0.0035;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 21825438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21825498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3125;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0005;THETA=0.0010;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 21825504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8160;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21825593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21825646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.0652;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 21825658 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21825673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.964;LDAF=0.2471;AVGPOST=0.9793;RSQ=0.9608;ERATE=0.0079;THETA=0.0036;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 21825761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0255;AVGPOST=0.9973;RSQ=0.9606;ERATE=0.0003;THETA=0.0072;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21826006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0105;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21826088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21826187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7710;ERATE=0.0004;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21826212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1079;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0003;THETA=0.0012;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 21826232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8053;ERATE=0.0003;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21826268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9172;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21826308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21826333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6128;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21826404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0744;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 21826436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9254;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21826437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21826465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5779;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21826541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8253;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21826597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21826683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21826708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21826715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9128;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21826755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1069;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21826764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0248;AVGPOST=0.9986;RSQ=0.9819;ERATE=0.0006;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 21826770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21826840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0466;AVGPOST=0.9987;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 21827006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5730;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827164 . GGAA G 412 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21827320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5972;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21827367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5605;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9573;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21827592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21827746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21827800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7449;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21827807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21827813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6866;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21827910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6775;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21827938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21828031 rs71812649 AAAGT A 1346 PASS INDEL;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0107;AVGPOST=0.9975;RSQ=0.9160;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21828208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21828211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21828218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21828234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6615;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21828285 . ATC A 38 PASS INDEL;BAVGPOST=0.996;BRSQ=0.625;LDAF=0.0044;AVGPOST=0.9952;RSQ=0.5746;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21828299 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1638;AVGPOST=0.9932;RSQ=0.9833;ERATE=0.0004;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 21828318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0652;AVGPOST=0.9952;RSQ=0.9667;ERATE=0.0005;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 21828342 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21828497 . CACTGTT C 4390 PASS INDEL;BAVGPOST=0.995;BRSQ=0.868;LDAF=0.0241;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21828527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9164;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21828542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4429;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 21828578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21828862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5344;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21828878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0243;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0039;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21828882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21828988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6625;ERATE=0.0007;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21829104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21829160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8594;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21829235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21829244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.526;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5889;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21829286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0066;AVGPOST=0.9935;RSQ=0.6130;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21829289 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4186;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0006;THETA=0.0006;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 21829359 . CT C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8359;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21829381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8868;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21829493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21829695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9131;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21829920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7718;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21829979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21830176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4559;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830182 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21830190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6174;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21830255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830340 . GACAA G 510 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8568;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21830463 . CAGAG C 193 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.7525;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21830469 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830544 . C CCGCT 56284 PASS INDEL;BAVGPOST=0.982;BRSQ=0.959;LDAF=0.2711;AVGPOST=0.9833;RSQ=0.9716;ERATE=0.0003;THETA=0.0007;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 21830579 . C CGCTT 22015 PASS INDEL;BAVGPOST=0.983;BRSQ=0.960;LDAF=0.2711;AVGPOST=0.9845;RSQ=0.9737;ERATE=0.0003;THETA=0.0006;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 21830580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5496;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21830780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21830796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7929;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21830898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21830930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 21830971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7103;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21830990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6879;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21831003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21831050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7846;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21831225 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5839;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21831732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21831825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7443;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21831859 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4184;AVGPOST=0.9961;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 21831911 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.8210;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21831935 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0065;AVGPOST=0.9962;RSQ=0.7591;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21831941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0321;AVGPOST=0.9993;RSQ=0.9908;ERATE=0.0004;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 21831954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4331;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21831966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21832079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5919;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21832098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21832205 . A AAAT 2394 PASS INDEL;BAVGPOST=0.994;BRSQ=0.896;LDAF=0.0324;AVGPOST=0.9898;RSQ=0.8617;ERATE=0.0021;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 21832376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21832589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7556;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21832645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9427;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21832710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9519;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21832926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0102;AVGPOST=0.9981;RSQ=0.9311;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21832963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7513;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21832965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9428;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.810;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7226;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21833022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8935;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21833069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833136 . A ATAC 2715 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0003;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833247 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1464;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0005;THETA=0.0007;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 21833302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5024;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21833389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1324;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21833467 . TA T 613 PASS INDEL;BAVGPOST=0.995;BRSQ=0.863;LDAF=0.0182;AVGPOST=0.9894;RSQ=0.7842;ERATE=0.0026;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21833481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21833539 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21833700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8862;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21833714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21833867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7359;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21833875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9318;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21833984 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3105;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21833998 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6751;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21834016 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.8091;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21834021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8491;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0044;AVGPOST=0.9928;RSQ=0.3090;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21834090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.878;LDAF=0.7048;AVGPOST=0.9132;RSQ=0.8472;ERATE=0.0127;THETA=0.0008;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 21834094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.781;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.8788;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21834180 . CAAAAATA C 344 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8470;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21834225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21834260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9579;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834309 . G GT 845 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9508;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21834313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9198;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21834334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6015;AVGPOST=0.9958;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 21834375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9383;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21834441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21834689 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9574;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9626;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21834945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7055;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21834965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8806;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21835001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1327;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 21835096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8404;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21835131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8037;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21835167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21835185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9511;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21835200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21835203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6018;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 21835238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21835264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9056;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21835345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21835371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21835533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21835589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.7431;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21835615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1384;AVGPOST=0.9972;RSQ=0.9906;ERATE=0.0004;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 21835618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1361;AVGPOST=0.9976;RSQ=0.9910;ERATE=0.0005;THETA=0.0007;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 21835658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21835792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9458;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21835804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21835847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6263;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21835963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.9075;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21836075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5625;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21836110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6016;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 21836175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21836231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836278 . G GCTAGGGCTTC 4192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.9366;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21836324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7095;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21836358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21836375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8525;ERATE=0.0007;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21836547 . AAC A 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4835;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.544;LDAF=0.0058;AVGPOST=0.9934;RSQ=0.5471;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21836612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21836647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8062;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21836670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21836683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21836773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5666;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 21836775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21836951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4159;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 21836962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1338;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 21837082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21837121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21837122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21837130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9014;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21837165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21837219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21837295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21837303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21837322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3939;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21837364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21837467 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6099;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21837709 . G GA 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3674;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21837798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.7792;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21837820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21837988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.850;LDAF=0.0244;AVGPOST=0.9951;RSQ=0.9311;ERATE=0.0003;THETA=0.0001;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 21838049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6314;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8358;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21838197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6192;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.734;LDAF=0.0888;AVGPOST=0.9354;RSQ=0.6922;ERATE=0.0146;THETA=0.0008;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 21838295 rs36061943 A AT 23176 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2242;AVGPOST=0.9970;RSQ=0.9931;ERATE=0.0006;THETA=0.0010;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 21838295 . AC A 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3428;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21838365 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21838489 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21838541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21838603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21838796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1240;AVGPOST=0.9970;RSQ=0.9902;ERATE=0.0005;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 21838812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21838829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21839026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9707;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21839071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6856;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21839131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4837;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21839153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21839306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7539;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21839502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7450;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21839570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21839630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21839686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1311;AVGPOST=0.9961;RSQ=0.9870;ERATE=0.0005;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 21839987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=0.9919;RSQ=0.6644;ERATE=0.0007;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21840060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.868;LDAF=0.0522;AVGPOST=0.9957;RSQ=0.9650;ERATE=0.0004;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 21840084 . TG T 4738 PASS INDEL;BAVGPOST=0.964;BRSQ=0.861;LDAF=0.1172;AVGPOST=0.9706;RSQ=0.9035;ERATE=0.0013;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 21840190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.909;LDAF=0.0553;AVGPOST=0.9961;RSQ=0.9669;ERATE=0.0007;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 21840267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0542;AVGPOST=0.9955;RSQ=0.9658;ERATE=0.0005;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 21840314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.811;LDAF=0.1940;AVGPOST=0.9644;RSQ=0.9299;ERATE=0.0005;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 21840483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9285;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21840674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1237;AVGPOST=0.9978;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 21840685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7512;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21840708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.627;LDAF=0.0246;AVGPOST=0.9781;RSQ=0.6594;ERATE=0.0033;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21840748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0052;AVGPOST=0.9967;RSQ=0.7501;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21840753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7845;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21841082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0202;AVGPOST=0.9977;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21841110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.719;LDAF=0.0127;AVGPOST=0.9930;RSQ=0.7718;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21841113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.936;LDAF=0.1053;AVGPOST=0.9926;RSQ=0.9728;ERATE=0.0004;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 21841130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7703;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21841367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.971;LDAF=0.1058;AVGPOST=0.9974;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 21841375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.1704;AVGPOST=0.9967;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 21841507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0058;AVGPOST=0.9969;RSQ=0.7905;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21841732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5191;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21841990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7063;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21842041 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7297;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21842130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1308;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 21842264 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7912;AVGPOST=0.9959;RSQ=0.9898;ERATE=0.0005;THETA=0.0003;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 21842303 . CTAT C 860 PASS INDEL;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0104;AVGPOST=0.9975;RSQ=0.9028;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21842311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21842412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0511;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 21842456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0084;AVGPOST=0.9971;RSQ=0.8754;ERATE=0.0005;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21842478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1699;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 21842521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.849;LDAF=0.0135;AVGPOST=0.9980;RSQ=0.9352;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 21842570 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21842606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21842620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21842624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21842636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2262;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 21842770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6204;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21842816 . A AG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6436;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21842840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4856;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21842902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21842917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8006;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 21842926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2310;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 21842964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8772;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21842996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21843055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.4502;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21843105 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21843108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7547;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21843174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9586;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21843264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9991;RSQ=0.9853;ERATE=0.0004;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 21843296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6324;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21843341 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21843344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8323;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21843423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8103;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 21843468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6731;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21843544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6344;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21843572 . AT A 726 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9250;ERATE=0.0004;THETA=0.0028;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21843959 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6783;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21843966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7980;AVGPOST=0.9943;RSQ=0.9866;ERATE=0.0008;THETA=0.0004;AC=1745;AN=2184 GT:DS:GL:BD 0.79899269 1
1 21843981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4779;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21844062 . A ACAAT 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21844123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21844161 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8238;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 21844165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7019;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21844315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21844358 . GATAC G 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4308;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21844409 rs35382069 C CAT 1158 PASS INDEL;BAVGPOST=0.988;BRSQ=0.752;LDAF=0.0281;AVGPOST=0.9743;RSQ=0.6463;ERATE=0.0025;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 21844421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6415;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21844432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.700;LDAF=0.0257;AVGPOST=0.9746;RSQ=0.6368;ERATE=0.0034;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 21844434 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21844556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8237;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 21844663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2016;AVGPOST=0.9968;RSQ=0.9922;ERATE=0.0005;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 21844719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7971;AVGPOST=0.9912;RSQ=0.9778;ERATE=0.0015;THETA=0.0002;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 21844782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.373;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3223;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21844826 . CATAT C 163 PASS INDEL;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0094;AVGPOST=0.9955;RSQ=0.7842;ERATE=0.0008;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21844872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.430;LDAF=0.0049;AVGPOST=0.9933;RSQ=0.4123;ERATE=0.0011;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21844902 rs67693840 A ATATG 2457 PASS INDEL;BAVGPOST=0.868;BRSQ=0.451;LDAF=0.1851;AVGPOST=0.7946;RSQ=0.4540;ERATE=0.0292;THETA=0.0005;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 21844922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.7924;AVGPOST=0.9676;RSQ=0.9238;ERATE=0.0040;THETA=0.0003;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 21844931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4674;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21844948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7714;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21844973 rs72153831 CAA C 11326 PASS INDEL;BAVGPOST=0.979;BRSQ=0.940;LDAF=0.2094;AVGPOST=0.9926;RSQ=0.9813;ERATE=0.0008;THETA=0.0004;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 21845052 . TTA T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3070;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21845184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21845188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3585;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0007;THETA=0.0004;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 21845243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21845276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21845402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21845416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3590;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 21845505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8004;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 21845512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21845525 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21845535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8763;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21845644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1072;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 21845655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3584;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0006;THETA=0.0005;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 21845820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9384;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21845846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8007;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 21845922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21845968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9696;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21845969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21846134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21846294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7144;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21846347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8332;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21846375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8105;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 21846472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0164;AVGPOST=0.9978;RSQ=0.9473;ERATE=0.0003;THETA=0.0020;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21846495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21846496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0145;AVGPOST=0.9970;RSQ=0.9120;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21846593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7510;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21846619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21846629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9872;AVGPOST=0.9990;RSQ=0.9687;ERATE=0.0005;THETA=0.0006;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 21846776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21846817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4327;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21846856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8006;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 21846876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0033;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21846963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6374;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21847067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21847176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5699;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21847310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5911;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 21847315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6006;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21847351 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3507;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0009;THETA=0.0003;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 21847423 . T TAG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5023;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21847453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8805;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21847682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.945;LDAF=0.1283;AVGPOST=0.9910;RSQ=0.9695;ERATE=0.0004;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 21847809 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9987;RSQ=0.9820;ERATE=0.0002;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 21847851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21847913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=0.9993;RSQ=0.9911;ERATE=0.0003;THETA=0.0020;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 21847946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3639;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21848012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0031;AVGPOST=0.9960;RSQ=0.6218;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21848067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21848365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8913;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21848376 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8200;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21848522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21848544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7008;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21848674 . C CT 1402 PASS INDEL;BAVGPOST=0.478;BRSQ=0.152;LDAF=0.5539;AVGPOST=0.6550;RSQ=0.4067;ERATE=0.0132;THETA=0.0005;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 21848689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0287;AVGPOST=0.9951;RSQ=0.9286;ERATE=0.0005;THETA=0.0010;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21848770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21848853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7882;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21848894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21848962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0027;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21848998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21849054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0313;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21849260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0002;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21849287 . C CT 1191 PASS INDEL;BAVGPOST=0.937;BRSQ=0.599;LDAF=0.1080;AVGPOST=0.8902;RSQ=0.5512;ERATE=0.0191;THETA=0.0013;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 21849388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0350;AVGPOST=0.9964;RSQ=0.9616;ERATE=0.0007;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 21849395 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0431;AVGPOST=0.9959;RSQ=0.9685;ERATE=0.0005;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 21849396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9512;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21849450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6172;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21849502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.812;LDAF=0.0120;AVGPOST=0.9960;RSQ=0.8661;ERATE=0.0009;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21849585 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6115;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21849673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.6170;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21849760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9677;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21849811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4684;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21849852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0294;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21849892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.2165;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21850068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21850178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0027;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21850310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6308;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21850371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21850394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 21850464 . A AT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21850500 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7927;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21850514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6246;AVGPOST=0.9922;RSQ=0.9875;ERATE=0.0006;THETA=0.0009;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 21850565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0297;AVGPOST=0.9987;RSQ=0.9843;ERATE=0.0004;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 21850619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0047;AVGPOST=0.9955;RSQ=0.6511;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21850826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9379;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21851058 . AT A 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5953;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21851077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 21851157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.906;LDAF=0.0272;AVGPOST=0.9961;RSQ=0.9386;ERATE=0.0004;THETA=0.0015;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 21851166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.644;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7941;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21851208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5856;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21851241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9747;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21851398 . G GT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5837;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21851408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6366;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21851494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6140;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0004;THETA=0.0008;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 21851495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0159;AVGPOST=0.9980;RSQ=0.9414;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 21851523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21851533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0745;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0004;THETA=0.0017;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 21851542 . A AG 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21851549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21851557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21851607 . CTT C 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3283;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21851731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0125;AVGPOST=0.9984;RSQ=0.9452;ERATE=0.0005;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21851821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21851826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4335;AVGPOST=0.9931;RSQ=0.9896;ERATE=0.0006;THETA=0.0006;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 21851878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.9081;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 21851973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0269;AVGPOST=0.9984;RSQ=0.9779;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 21851992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3785;ERATE=0.0009;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21852022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6286;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21852038 . CTTTAG C 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3268;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21852238 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4139;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21852291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0004;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21852409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8805;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21852455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6552;ERATE=0.0002;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21852475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21852686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9163;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21852735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0002;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21852955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21852967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21852987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21853010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21853093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5610;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21853283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21853285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.7024;ERATE=0.0006;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21853339 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0155;AVGPOST=0.9980;RSQ=0.9549;ERATE=0.0002;THETA=0.0032;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21853479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0002;THETA=0.0024;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21853488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7423;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21853535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9353;ERATE=0.0006;THETA=0.0053;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 21853541 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6947;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21853573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21853706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21853766 . G GC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5029;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21853888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.875;LDAF=0.0192;AVGPOST=0.9932;RSQ=0.8771;ERATE=0.0005;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21853890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0002;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21853916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7662;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21853969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9224;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21854003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9251;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21854034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7586;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21854152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4782;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21854167 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21854195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9288;ERATE=0.0003;THETA=0.0106;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21854196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8828;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21854211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21854221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21854341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0109;AVGPOST=0.9986;RSQ=0.9529;ERATE=0.0003;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 21854387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.6833;AVGPOST=0.9373;RSQ=0.8899;ERATE=0.0197;THETA=0.0004;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 21854591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21854631 rs68144647 TTTA T 65826 PASS INDEL;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.6880;AVGPOST=0.9822;RSQ=0.9673;ERATE=0.0016;THETA=0.0055;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 21854717 rs10583935 TA T 7012 PASS INDEL;BAVGPOST=0.861;BRSQ=0.755;LDAF=0.5567;AVGPOST=0.7972;RSQ=0.6924;ERATE=0.0422;THETA=0.0060;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 21854722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0101;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21854884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1123;AVGPOST=0.9933;RSQ=0.9750;ERATE=0.0004;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 21854924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5721;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21855027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.2105;AVGPOST=0.9884;RSQ=0.9739;ERATE=0.0008;THETA=0.0095;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 21855036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5044;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21855062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.940;LDAF=0.0555;AVGPOST=0.9931;RSQ=0.9518;ERATE=0.0006;THETA=0.0012;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 21855091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7558;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21855148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6138;ERATE=0.0004;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21855163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5823;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21855172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1066;AVGPOST=0.9934;RSQ=0.9741;ERATE=0.0005;THETA=0.0050;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 21855263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5183;ERATE=0.0006;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21855297 rs59541418 T TAA 596 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7972;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21855316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.804;LDAF=0.0925;AVGPOST=0.9881;RSQ=0.9418;ERATE=0.0015;THETA=0.0010;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 21855381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0072;AVGPOST=0.9971;RSQ=0.8244;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21855433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0410;AVGPOST=0.9938;RSQ=0.9379;ERATE=0.0003;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 21855539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0785;AVGPOST=0.9979;RSQ=0.9876;ERATE=0.0005;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21855627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0781;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 21855732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21855770 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0790;AVGPOST=0.9984;RSQ=0.9902;ERATE=0.0004;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21855805 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6040;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21855879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7346;ERATE=0.0006;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21855889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21855898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7051;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21855909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5000;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21855944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4090;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21855952 . C CAACT 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3233;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21856030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4727;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21856044 . TTA T 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21856125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5580;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21856306 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6736;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 21856363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7297;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21856465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5932;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 21856623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8883;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21856664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0788;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0003;THETA=0.0013;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 21856865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8938;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 21856902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8166;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21856920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21856955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.6740;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 21856981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21857052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21857400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6962;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0010;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 21857464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6726;AVGPOST=0.9978;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 21857495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1750;AVGPOST=0.9953;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 21857557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6165;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21857568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21857625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0139;AVGPOST=0.9976;RSQ=0.9294;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21857671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6680;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21857832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0492;AVGPOST=0.9947;RSQ=0.9565;ERATE=0.0004;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 21857858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5817;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21857859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7046;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21857868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6740;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 21857918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.843;LDAF=0.0078;AVGPOST=0.9978;RSQ=0.8925;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21857929 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4099;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21857939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0150;AVGPOST=0.9988;RSQ=0.9679;ERATE=0.0004;THETA=0.0055;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 21858026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0050;AVGPOST=0.9937;RSQ=0.5104;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21858110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8686;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21858153 . AAAG A 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21858259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21858372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9121;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21858449 . TTAAC T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4221;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21858495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.953;LDAF=0.0678;AVGPOST=0.9928;RSQ=0.9532;ERATE=0.0006;THETA=0.0024;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 21858537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5465;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21858593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9624;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21858611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6900;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21858652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8389;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21858694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8920;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21858748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21858751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9207;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21858797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2640;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 21858803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7634;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21858992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.941;LDAF=0.5078;AVGPOST=0.9277;RSQ=0.8891;ERATE=0.0152;THETA=0.0030;AC=1122;AN=2184 GT:DS:GL:BD 0.51373625 1
1 21859063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21859265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8268;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21859282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21859283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21859357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2841;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 21859452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21859469 . A AT 348 PASS INDEL;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0080;AVGPOST=0.9911;RSQ=0.5615;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21859476 . C CTA 7274 PASS INDEL;BAVGPOST=0.878;BRSQ=0.621;LDAF=0.2117;AVGPOST=0.8365;RSQ=0.5852;ERATE=0.0556;THETA=0.0002;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 21859505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5946;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21859515 . A ATC 5211 PASS INDEL;BAVGPOST=0.909;BRSQ=0.623;LDAF=0.1805;AVGPOST=0.8522;RSQ=0.5717;ERATE=0.0419;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 21859515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4204;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21859532 . AC A 37299 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8180;AVGPOST=0.9963;RSQ=0.9910;ERATE=0.0007;THETA=0.0006;AC=1786;AN=2184 GT:DS:GL:BD 0.81776559 1
1 21859553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1084;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0004;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 21859705 . TA T 190 PASS INDEL;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0033;AVGPOST=0.9967;RSQ=0.6281;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21860196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21860222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4989;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21860294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21860329 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9770;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21860442 rs79128867 TTAAAA T 13627 PASS INDEL;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1107;AVGPOST=0.9934;RSQ=0.9735;ERATE=0.0005;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 21860573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21860660 . T TA 359 PASS INDEL;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8280;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21860898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2382;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 21860917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9038;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21861015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21861070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21861273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9279;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21861391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9386;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21861518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5907;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21861521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21861534 . ATTAAC A 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7171;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21861710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21861735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21861741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21861781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0166;AVGPOST=0.9989;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21861794 . T TA 171 PASS INDEL;BAVGPOST=0.995;BRSQ=0.631;LDAF=0.0100;AVGPOST=0.9894;RSQ=0.5661;ERATE=0.0021;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21861821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.904;LDAF=0.0277;AVGPOST=0.9974;RSQ=0.9638;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 21861951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.1415;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21861963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9370;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21862010 . CAG C 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21862070 . G GA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5857;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21862090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9172;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21862254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21862292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4103;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21862331 . G GT 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9386;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21862360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1011;AVGPOST=0.9990;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 21862463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2838;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 21862630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8930;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21862642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5410;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21862659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8622;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21862672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9405;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21862697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7270;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21862758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1080;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 21862906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21863142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21863208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21863242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6975;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21863287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21863426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3937;AVGPOST=0.9926;RSQ=0.9897;ERATE=0.0019;THETA=0.0002;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 21863447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1122;AVGPOST=0.9967;RSQ=0.9892;ERATE=0.0003;THETA=0.0011;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 21863448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0005;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21863484 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0670;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21863539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0454;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 21863648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0669;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0013;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21863821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.914;LDAF=0.0875;AVGPOST=0.9705;RSQ=0.8563;ERATE=0.0077;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 21863867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21863964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0443;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21863978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0677;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 21863993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0004;THETA=0.0009;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21864065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8688;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21864137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3770;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0008;THETA=0.0002;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 21864191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21864228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21864255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21864267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21864302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21864307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6731;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21864390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9806;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21864407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21864441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8560;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21864455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0670;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21864497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21864521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7441;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21864642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21864667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21864676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9146;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 21864801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21864879 . GTC G 344 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8709;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21864923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0672;AVGPOST=0.9988;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21864934 . CA C 7569 PASS INDEL;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0668;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21865023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21865154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0224;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21865285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8412;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 21865412 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0668;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21865431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0667;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21865439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3758;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 21865445 rs35992316 GC G 19785 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1223;AVGPOST=0.9980;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 21865522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21865553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6219;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21865626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8682;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21865767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21865811 . AG A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9071;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21865912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21865916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 21865962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8755;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 21866069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21866074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21866100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0671;AVGPOST=0.9984;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21866109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21866241 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21866268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0444;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 21866324 . T TTC 1279 PASS INDEL;BAVGPOST=0.954;BRSQ=0.780;LDAF=0.1339;AVGPOST=0.8707;RSQ=0.5672;ERATE=0.0099;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 21866399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.382;LDAF=0.0816;AVGPOST=0.8895;RSQ=0.3952;ERATE=0.0141;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 21866416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3953;AVGPOST=0.9944;RSQ=0.9913;ERATE=0.0007;THETA=0.0001;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 21866482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6086;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21866584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6145;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21866626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0223;AVGPOST=0.9988;RSQ=0.9776;ERATE=0.0005;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 21866788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.942;LDAF=0.3276;AVGPOST=0.9689;RSQ=0.9522;ERATE=0.0013;THETA=0.0004;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 21866818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3957;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0007;THETA=0.0008;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 21867080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4447;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 21867262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0174;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 21867348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3370;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21867465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21867479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8690;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21867532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21867534 . C CA 8375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0655;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 21867599 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7732;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21867656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6751;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21867661 . TAAAG T 8688 PASS INDEL;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0675;AVGPOST=0.9982;RSQ=0.9882;ERATE=0.0005;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 21867838 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21867963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4189;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21867989 . ACT A 135 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21868110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.6264;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21868253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0201;AVGPOST=0.9926;RSQ=0.8436;ERATE=0.0007;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 21868412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6152;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21868423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.648;LDAF=0.0150;AVGPOST=0.9882;RSQ=0.7226;ERATE=0.0005;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21868448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.4849;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21868455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0174;AVGPOST=0.9973;RSQ=0.9391;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21868695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.625;LDAF=0.0171;AVGPOST=0.9859;RSQ=0.6997;ERATE=0.0006;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 21868748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21868759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6595;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21868770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.939;LDAF=0.8344;AVGPOST=0.9881;RSQ=0.9671;ERATE=0.0012;THETA=0.0005;AC=1827;AN=2184 GT:DS:GL:BD 0.83653843 1
1 21868776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1521;AVGPOST=0.9884;RSQ=0.9656;ERATE=0.0012;THETA=0.0008;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 21869026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0194;AVGPOST=0.9983;RSQ=0.9697;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 21869179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21869321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5598;AVGPOST=0.9959;RSQ=0.9939;ERATE=0.0008;THETA=0.0005;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 21869328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21869519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21869645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21869828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9608;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 21870040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6626;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 21870045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21870065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21870142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0858;AVGPOST=0.9987;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 21870191 rs61395568 TA T 61122 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5613;AVGPOST=0.9863;RSQ=0.9810;ERATE=0.0034;THETA=0.0004;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 21870196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9085;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21870279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6622;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 21870297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5524;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21870366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7676;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21870430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21870548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21870572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0002;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 21870659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21870703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 21870718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0686;AVGPOST=0.9973;RSQ=0.9830;ERATE=0.0004;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 21870724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0852;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0002;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 21870766 . G GA 130 PASS INDEL;BAVGPOST=0.982;BRSQ=0.489;LDAF=0.0335;AVGPOST=0.9585;RSQ=0.4976;ERATE=0.0088;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21870793 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7833;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21870865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5611;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 21870925 . T TAC 15721 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0854;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0004;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 21871323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21871325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0851;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 21871355 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9211;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 21871359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4876;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21871522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4157;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21871527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21871601 . A AT 362 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21871664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0230;AVGPOST=0.9990;RSQ=0.9803;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 21871695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21871701 . CATT C 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3599;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21871818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.9973;AVGPOST=0.9987;RSQ=0.8180;ERATE=0.0006;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 21871907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21871921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21872002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21872166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5781;AVGPOST=0.9951;RSQ=0.9929;ERATE=0.0006;THETA=0.0003;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 21872207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21872299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21872367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0860;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0002;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 21872483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0859;AVGPOST=0.9981;RSQ=0.9904;ERATE=0.0004;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 21872505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21872526 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0862;AVGPOST=0.9985;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 21872533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8481;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21872639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8682;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21872819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6641;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21872848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0105;AVGPOST=0.9994;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 21872897 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21873007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21873086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21873239 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0849;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 21873243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9210;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21873450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21873459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21873640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0054;AVGPOST=0.9970;RSQ=0.7737;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 21873650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21873663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5106;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21873766 rs77799759 G GA 14817 PASS INDEL;BAVGPOST=0.973;BRSQ=0.935;LDAF=0.2247;AVGPOST=0.9585;RSQ=0.9153;ERATE=0.0103;THETA=0.0004;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 21873802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21873908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21873972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0636;AVGPOST=0.9978;RSQ=0.9846;ERATE=0.0004;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 21873989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4320;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4988;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21874295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21874308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6671;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.8976;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21874321 . CT C 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4093;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0093;AVGPOST=0.9964;RSQ=0.8434;ERATE=0.0004;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 21874401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0183;AVGPOST=0.9917;RSQ=0.8294;ERATE=0.0012;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 21874414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7731;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21874420 rs60237981 TTATTTTTTG T 11844 PASS INDEL;BAVGPOST=0.984;BRSQ=0.946;LDAF=0.1790;AVGPOST=0.9902;RSQ=0.9719;ERATE=0.0010;THETA=0.0005;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 21874467 . A AT 73 PASS INDEL;BAVGPOST=0.997;BRSQ=0.420;LDAF=0.0101;AVGPOST=0.9919;RSQ=0.6838;ERATE=0.0007;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21874478 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.3296;AVGPOST=0.9548;RSQ=0.9272;ERATE=0.0102;THETA=0.0004;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 21874504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8138;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21874626 . C CG 96 PASS INDEL;BAVGPOST=0.997;BRSQ=0.557;LDAF=0.0057;AVGPOST=0.9941;RSQ=0.5567;ERATE=0.0015;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21874857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21874966 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3163;AVGPOST=0.9933;RSQ=0.9872;ERATE=0.0009;THETA=0.0003;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 21875044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.540;LDAF=0.0146;AVGPOST=0.9849;RSQ=0.5778;ERATE=0.0015;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21875119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0171;AVGPOST=0.9993;RSQ=0.9823;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 21875176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8234;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21875412 . AT A 103 PASS INDEL;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.6935;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21875475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7796;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21875498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3119;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 21875582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9202;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21875719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9802;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21875732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9105;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 21875910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4886;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21875936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6704;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21876015 . A AT 788 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8836;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 21876029 . T TA 66 PASS INDEL;BAVGPOST=0.997;BRSQ=0.639;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.8965;ERATE=0.0007;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21876030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21876110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7406;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21876256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21876312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21876324 rs71677527 GA G 2621 PASS INDEL;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0445;AVGPOST=0.9912;RSQ=0.9242;ERATE=0.0012;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 21876352 . AAAGGAAAAAAAGG A 6253 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0200;AVGPOST=0.9990;RSQ=0.9775;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 21876391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4661;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21876509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21876564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0058;AVGPOST=0.9947;RSQ=0.6467;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21876687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7681;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21876831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3121;AVGPOST=0.9962;RSQ=0.9922;ERATE=0.0006;THETA=0.0003;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 21876885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.457;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5245;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21876942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8715;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21876960 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6301;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 21876966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21877054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.343;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.2168;ERATE=0.0006;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21877072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0068;AVGPOST=0.9904;RSQ=0.4575;ERATE=0.0012;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21877073 . G GT 359 PASS INDEL;BAVGPOST=0.989;BRSQ=0.598;LDAF=0.0261;AVGPOST=0.9700;RSQ=0.5324;ERATE=0.0049;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 21877144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5572;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21877238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5150;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21877250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6171;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21877396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7396;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21877428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8031;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21877447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0101;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 21877452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7850;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21877484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6945;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 21877553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21877662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21877690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21877779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6431;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21877805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9953;RSQ=0.3949;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21877822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21877831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2196;AVGPOST=0.9940;RSQ=0.9860;ERATE=0.0006;THETA=0.0011;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 21877841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8828;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 21877868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0097;AVGPOST=0.9973;RSQ=0.8964;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 21877968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21878128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7049;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21878218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0362;AVGPOST=0.9969;RSQ=0.9694;ERATE=0.0004;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 21878281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6122;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21878304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6581;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0007;THETA=0.0009;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 21878558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21878563 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7975;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21878734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21878814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.745;LDAF=0.0060;AVGPOST=0.9983;RSQ=0.8855;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 21878927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0478;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 21878980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 21879037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5988;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 21879187 . CCTTT C 1960 PASS INDEL;BAVGPOST=0.988;BRSQ=0.840;LDAF=0.0350;AVGPOST=0.9896;RSQ=0.9077;ERATE=0.0005;THETA=0.0013;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 21879259 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.847;LDAF=0.0339;AVGPOST=0.9900;RSQ=0.9084;ERATE=0.0003;THETA=0.0014;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 21879265 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.647;LDAF=0.0213;AVGPOST=0.9840;RSQ=0.7387;ERATE=0.0006;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 21879272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3213;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 21879434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5831;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 21879700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8348;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 21879776 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6271;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 21879913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0089;AVGPOST=0.9964;RSQ=0.8436;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 21880060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0364;AVGPOST=0.9971;RSQ=0.9712;ERATE=0.0005;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 21880069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.840;LDAF=0.0100;AVGPOST=0.9964;RSQ=0.8632;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0